80 results on '"David, J.S."'
Search Results
2. Roles of the procollagen C-propeptides in health and disease
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David J.S. Hulmes
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Fibrillar Collagens ,Trimer ,macromolecular substances ,Fibril ,Biochemistry ,Extracellular matrix ,03 medical and health sciences ,0302 clinical medicine ,Extracellular ,Humans ,Disulfides ,Protein Structure, Quaternary ,Protein precursor ,Molecular Biology ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Chemistry ,Collagen Diseases ,Peptide Fragments ,Amino acid ,Procollagen peptidase ,030220 oncology & carcinogenesis ,Mutation ,Protein Multimerization ,Procollagen ,Intracellular - Abstract
The procollagen C-propeptides of the fibrillar collagens play key roles in the intracellular assembly of procollagen molecules from their constituent polypeptides chains, and in the extracellular assembly of collagen molecules into fibrils. Here we review recent advances in understanding the molecular mechanisms controlling C-propeptide trimerization which have revealed the importance of inter-chain disulphide bonding and a small number of charged amino acids in the stability and specificity of different types of chain association. We also show how the crystal structure of the complex between the C-propeptide trimer of procollagen III and the active fragment of procollagen C-proteinase enhancer-1 leads to a detailed model for accelerating release of the C-propeptides from procollagen by bone morphogenetic protein-1 and related proteinases. We then discuss the effects of disease-related missense mutations in the C-propeptides in relation to the sites of these mutations in the three-dimensional structure. While in general there is a good correlation between disease severity and structure-based predictions, there are notable exceptions, suggesting new interactions involving the C-propeptides yet to be characterized. Mutations affecting proteolytic release of the C-propeptides from procollagen are discussed in detail. Finally, the roles of recently discovered interaction partners for the C-propeptides are considered during fibril assembly and cross-linking.
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- 2019
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3. Screening polymeric ionic liquids for chromatography-based purification of bacteriophage M13
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Ana Azevedo, Inês M. Sá, Alexandra Wagner, David J.S. Patinha, João Gonçalves, Isabel M. Marrucho, Maria João Jacinto, Maria Raquel Aires-Barros, and Richard C. Willson
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Chromatography ,Phage display ,M13 bacteriophage ,Ion exchange ,biology ,Chemistry ,Elution ,viruses ,Microfiltration ,Filtration and Separation ,02 engineering and technology ,021001 nanoscience & nanotechnology ,biology.organism_classification ,Analytical Chemistry ,Separation process ,Bacteriophage ,Adsorption ,020401 chemical engineering ,Batch adsorption ,Polymeric ionic liquids ,0204 chemical engineering ,Anion-exchange ,0210 nano-technology ,Bacteriophage M13 - Abstract
M13 bacteriophage is a key instrument in phage display applications, as well as a possible antibacterial therapeutic agent due to its highly restrictive bacterial pathogenesis, and other applications. The traditional phage purification process is usually achieved by gradient ultracentrifugation or a combination of precipitation, centrifugation and microfiltration. These approaches easily lead to long process times, high operational costs, phage aggregation and consequent product loss (approximately 60%). This work is thus focused on an alternative potential large-scale process to achieve high yield and purity while minimizing the operational costs. Electrostatic-based separation processes are also common biomolecules purification techniques. Although anion exchange chromatography has been used before to purify several viral particles, this technique has been poorly reported for the purification of M13 phage. In a recent work, our group has demonstrated the use of a predominant anion exchange process, where a polymeric ionic liquid (PIL) was used as an alternative separation matrix for M13 bacteriophage. In this work, a variety of system parameters was studied, including chemical structure of the cation and the anion, the crosslinker nature and its concentration, either in batch adsorption/elution or chromatographic operation mode. The PIL-based chromatographic operation mode revealed to be a suitable separation process for M13 from directly filtered E. coli supernatant, reaching over 70% M13 recovery and 4.6 purification factor in a single step. To our knowledge, this is the first time that PILs have been reported as separation agents for bioproducts from complex mixtures.
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- 2021
4. M13 bacteriophage purification using poly(ionic liquids) as alternative separation matrices
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M. Raquel Aires-Barros, David J.S. Patinha, Ana Azevedo, João Gonçalves, Maria João Jacinto, Isabel M. Marrucho, and Richard C. Willson
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Anions ,Phage display ,Polymers ,viruses ,Ionic Liquids ,02 engineering and technology ,Buffers ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Analytical Chemistry ,Bacteriophage ,chemistry.chemical_compound ,Imide ,Chromatography ,M13 bacteriophage ,Downstream processing ,Ion exchange ,biology ,Chemistry ,Organic Chemistry ,General Medicine ,021001 nanoscience & nanotechnology ,biology.organism_classification ,Combinatorial chemistry ,0104 chemical sciences ,Yield (chemistry) ,Ionic liquid ,Adsorption ,0210 nano-technology ,Bacteriophage M13 - Abstract
M13 is a filamentous, non-lytic bacteriophage that infects Escherichia coli via the F pilus. Currently, phage M13 is widely used in phage display technology and bio-nanotechnology, and is considered a possible antibacterial therapeutic agent, among other applications. Conventional phage purification involves 5-7 operational steps, with high operational costs and significant product loss (approximately 60%). In this work, we propose a scalable purification process for M13 bacteriophage using a novel stationary phase based on a polymeric ionic liquid (PIL) with a positively charged backbone structure. Poly (1-vinyl-3-ethyl imidazolium bis(trifluoromethylsulfonyl) imide) - poly(VEIM-TFSI) predominantly acted as an anion exchanger under binding-elution mode. This revealed to be a rapid and simple method for the recovery of phage M13 with an overall separation yield of over 70% after a single downstream step. To the best of our knowledge, PILs have never been used as separation matrices for biological products and the results obtained, together with the large number of cations and anions available to prepare PILs, illustrate well the large potential of the proposed methodology.
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- 2018
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5. Interaction of Complement Defence Collagens C1q and Mannose-Binding Lectin with BMP-1/Tolloid-like Proteinases
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Nicole M. Thielens, Chantal Dumestre-Pérard, Monique Lacroix, Agnès Tessier, Sandrine Vadon-Le Goff, Catherine Moali, Sylvie Ricard-Blum, Leena Bruckner-Tuderman, Alexander Nyström, Dimitra Kiritsi, David J.S. Hulmes, Evelyne Gout, Institut de biologie structurale (IBS - UMR 5075 ), Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Institut de Recherche Interdisciplinaire de Grenoble (IRIG), Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Centre National de la Recherche Scientifique (CNRS), Laboratoire de Biologie Tissulaire et d'ingénierie Thérapeutique UMR 5305 (LBTI), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Centre National de la Recherche Scientifique (CNRS), Laboratoire d'Immunologie, CHU Grenoble, Freiburg Institute for Advanced Studies, Albert-Ludwigs-Universität Freiburg, Universitätsklinikum Freiburg, Assemblages Supramoléculaires Péricellulaires et Extracellulaires (ASPE), Institut de Chimie et Biochimie Moléculaires et Supramoléculaires (ICBMS), Université de Lyon-Université de Lyon-Institut National des Sciences Appliquées de Lyon (INSA Lyon), Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-École Supérieure Chimie Physique Électronique de Lyon-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-École Supérieure Chimie Physique Électronique de Lyon-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), SPR (ISBG -UMS 3518), ANR-09-PIRI-0021,STR-ASS-DEF-COL(2009), Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Institut de Recherche Interdisciplinaire de Grenoble (IRIG), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Université de Lyon-Université de Lyon-École Supérieure de Chimie Physique Électronique de Lyon (CPE)-Institut National des Sciences Appliquées de Lyon (INSA Lyon), Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)-Université Claude Bernard Lyon 1 (UCBL), and Université de Lyon-Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)
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0301 basic medicine ,Proteases ,Skin Neoplasms ,Tolloid-Like Metalloproteinases ,lcsh:Medicine ,chemical and pharmacologic phenomena ,Mannose-Binding Lectin ,Bone morphogenetic protein 1 ,Article ,Bone Morphogenetic Protein 1 ,03 medical and health sciences ,0302 clinical medicine ,Humans ,lcsh:Science ,Complement C1q ,Complement Activation ,Melanoma ,Mannan-binding lectin ,Multidisciplinary ,Innate immune system ,Binding Sites ,[SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Structural Biology [q-bio.BM] ,Chemistry ,Extracellular matrix assembly ,lcsh:R ,Complement system ,Cell biology ,Epidermolysis Bullosa Dystrophica ,030104 developmental biology ,lcsh:Q ,Ficolin ,030215 immunology - Abstract
The defence collagens C1q and mannose-binding lectin (MBL) are immune recognition proteins that associate with the serine proteinases C1r/C1s and MBL-associated serine proteases (MASPs) to trigger activation of complement, a major innate immune system. Bone morphogenetic protein-1 (BMP-1)/tolloid-like proteinases (BTPs) are metalloproteinases with major roles in extracellular matrix assembly and growth factor signalling. Despite their different functions, C1r/C1s/MASPs and BTPs share structural similarities, including a specific CUB-EGF-CUB domain arrangement found only in these enzymes that mediates interactions with collagen-like proteins, suggesting a possible functional relationship. Here we investigated the potential interactions between the defence collagens C1q and MBL and the BTPs BMP-1 and mammalian tolloid-like-1 (mTLL-1). C1q and MBL bound to immobilized BMP-1 and mTLL-1 with nanomolar affinities. These interactions involved the collagen-like regions of the defence collagens and were inhibited by pre-incubation of C1q or MBL with their cognate complement proteinases. Soluble BMP-1 and mTLL-1 did not inhibit complement activation and the defence collagens were neither substrates nor inhibitors of BMP-1. Finally, C1q co-localized with BMP-1 in skin biopsies following melanoma excision and from patients with recessive dystrophic epidermolysis bullosa. The observed interactions provide support for a functional link between complement and BTPs during inflammation and tissue repair.
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- 2017
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6. Poly(ionic liquids) in solid phase microextraction: recent advances and perspectives
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Isabel M. Marrucho, David J.S. Patinha, and Armando J. D. Silvestre
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Materials science ,Polymers and Plastics ,Direct immersion ,Sorbent material ,New materials ,Nanotechnology ,02 engineering and technology ,010402 general chemistry ,Solid-phase microextraction ,01 natural sciences ,Polymerization ,chemistry.chemical_compound ,Fiber coating ,Surface modification ,Extraction phase ,Materials Chemistry ,Organic Chemistry ,Poly(ionic liquids) ,Surfaces and Interfaces ,Solid phase microextraction ,021001 nanoscience & nanotechnology ,Headspace ,0104 chemical sciences ,Metallic support ,chemistry ,Ionic liquid ,Ceramics and Composites ,0210 nano-technology - Abstract
During the last years, poly(ionic liquids) (PILs) have been gaining increased attention as materials for analytical chemistry. This success is due to the fact that PILs synthesis is generally based on the polymerization of ionic liquid monomers (ILMs), and thus some of their remarkable properties are shared with their polymeric form. Consequently, the facile design of task-specific ILMs led to an important platform to design new materials for solid phase microextraction (SPME). In this review, a critical evaluation of the main breakthroughs on the use of PILs as extraction phases for SPME. In particular, this critical review covers from ILMs/PILs synthesis, fiber coating processes, surface modifications (silica and metallic supports), to extraction modes, analytes categories, type of equipment ending with a discussion on limitations and future perspectives. PILs are undoubtedly competing in the frontline as inspiring materials for SPME.
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- 2019
7. New Low-Toxicity Cholinium-Based Ionic Liquids with Perfluoroalkanoate Anions for Aqueous Biphasic System Implementation
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Hugo R. Soares, Isabel M. Marrucho, Liliana C. Tomé, Catarina Florindo, Ana S. Coroadinha, and David J.S. Patinha
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chemistry.chemical_classification ,Aqueous solution ,Low toxicity ,010405 organic chemistry ,Renewable Energy, Sustainability and the Environment ,General Chemical Engineering ,General Chemistry ,010402 general chemistry ,Ternary phase ,01 natural sciences ,0104 chemical sciences ,chemistry.chemical_compound ,Chain length ,chemistry ,Ionic liquid ,Environmental Chemistry ,Organic chemistry ,Salting out ,Solubility ,Alkyl - Abstract
This work explores the widening of properties of cholinium-based ionic liquids (ILs) through their combination with perfluoroalkanoate anions so that higher number of aqueous biphasic systems (ABSs) containing nontoxic cholinium-based ILs is available. For that purpose, six cholinium perfluoroalkanoate ILs were synthesized and their cytotoxicity was evaluated using three different animal cell lines, envisaging biotechnology applications. Ternary phase equilibrium data for ABSs composed of the cholinium perfluoroalkanoate, with fluoroalkyl chains from C2 up to C7, using a strong salting out agent, K3PO4, were determined at 25 °C. The results show the relevant role of the size of fluorinated alkyl chain length in the anion since, contrary to other ABSs containing ILs with increasing alkyl chain length in the anion, the ABSs with cholinium perfluoroalkanoates present well-spaced solubility curves, allowing the conclusion that these ABSs can be tuned by a proper choice of the IL. The phase splitting mechanism...
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- 2016
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8. COL1A1 C-propeptide mutations cause ER mislocalization of procollagen and impair C-terminal procollagen processing
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Catherine Moali, Joan C. Marini, David R. Eyre, Elena Makareeva, Aileen M. Barnes, Sergey Leikin, Emmanuel Bettler, Marina Brusel, John Cassella, Wayne A. Cabral, David J.S. Hulmes, Aarthi Ashok, Efrat Kessler, MaryAnn Weis, Laboratoire de Biologie Tissulaire et d'ingénierie Thérapeutique UMR 5305 (LBTI), Université Claude Bernard Lyon 1 (UCBL), and Université de Lyon-Université de Lyon-Centre National de la Recherche Scientifique (CNRS)
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0301 basic medicine ,Collagen helix ,Mutant ,Mutation, Missense ,[SDV.BC.BC]Life Sciences [q-bio]/Cellular Biology/Subcellular Processes [q-bio.SC] ,macromolecular substances ,Matrix (biology) ,Fibril ,Endoplasmic Reticulum ,Collagen Type I ,Article ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Humans ,Molecular Biology ,ComputingMilieux_MISCELLANEOUS ,Cells, Cultured ,integumentary system ,Calorimetry, Differential Scanning ,Chemistry ,Osteoblast ,[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Molecular biology ,[SDV.BDD.MOR]Life Sciences [q-bio]/Development Biology/Morphogenesis ,Endoplasmic reticulum localization ,Fibroblasts ,Osteogenesis Imperfecta ,medicine.disease ,Cell biology ,Protein Structure, Tertiary ,Collagen Type I, alpha 1 Chain ,Procollagen peptidase ,[SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biomolecules [q-bio.BM] ,030104 developmental biology ,medicine.anatomical_structure ,[SDV.GEN.GH]Life Sciences [q-bio]/Genetics/Human genetics ,Microscopy, Fluorescence ,Osteogenesis imperfecta ,Molecular Medicine ,030217 neurology & neurosurgery ,[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology ,Procollagen - Abstract
Mutations in the type I procollagen C-propeptide occur in ~6.5% of Osteogenesis Imperfecta (OI) patients. They are of special interest because this region of procollagen is involved in α chain selection and folding, but is processed prior to fibril assembly and is absent in mature collagen fibrils in tissue. We investigated the consequences of seven COL1A1 C-propeptide mutations for collagen biochemistry in comparison to three probands with classical glycine substitutions in the collagen helix near the C-propeptide and a normal control. Procollagens with C-propeptide defects showed the expected delayed chain incorporation, slow folding and overmodification. Immunofluorescence microscopy indicated that procollagen with C-propeptide defects was mislocalized to the ER lumen, in contrast to the ER membrane localization of normal procollagen and procollagen with helical substitutions. Notably, pericellular processing of procollagen with C-propeptide mutations was defective, with accumulation of pC-collagen and/or reduced production of mature collagen. In vitro cleavage assays with BMP-1 ± PCPE-1 confirmed impaired C-propeptide processing of procollagens containing mutant proα1(I) chains. Overmodified collagens were incorporated into the matrix in culture. Dermal fibrils showed alterations in average diameter and diameter variability and bone fibrils were disorganized. Altered ER-localization and reduced pericellular processing of defective C-propeptides are expected to contribute to abnormal osteoblast differentiation and matrix function, respectively.
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- 2018
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9. Poly(ionic liquid) embedded particles as efficient solid phase microextraction phases of polar and aromatic analytes
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Isabel M. Marrucho, David J.S. Patinha, Armando J. D. Silvestre, Kari Vijayakrishna, and Pothanagandhi Nellepalli
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Gas chromatography ,Polydimethylsiloxane ,Chemistry ,010401 analytical chemistry ,Inorganic chemistry ,Poly(ionic liquids) ,Chain transfer ,Solid phase microextraction ,02 engineering and technology ,021001 nanoscience & nanotechnology ,Solid-phase microextraction ,01 natural sciences ,0104 chemical sciences ,Analytical Chemistry ,Styrene ,chemistry.chemical_compound ,Polymerization ,Bromide ,Alcohols ,Ionic liquid ,0210 nano-technology ,Imide ,Increased Surface Area ,BTEX - Abstract
In this work, a facile preparation of SPME fibers with increased surface area is presented. The SPME fibers were prepared by grinding poly(ionic liquids) (PILs) to obtain particles of 1–16 µm and, with the aid of a silicon adhesive, attach these particles to a steel wire support. Three different PILs, poly(1-vinyl-3-benzylimidazolium-co-styrene bromide) [poly(ViBnIm-co-Sty Br)], poly(1-vinyl-3-benzylimidazolium-co-styrene bis(trifluoromethanesulfonyl)imide) [poly(ViBnIm-co-Sty TFSI)] and poly(diallyldimethylamine bis(trifluoromethanesulfonyl)imide) [poly(Pyrr11 TFSI)], were used. The first two PILs were obtained by reversible addition–fragmentation chain transfer polymerization followed by metathesis reactions. The thicknesses of the prepared fibers were found to be 19 ± 4 µm and 85% of the particles used have diameters between 2 and 10 µm. The prepared fibers were tested by performing the headspace extraction of two standard solutions, one containing a mixture of alcohols with different chain lengths, and the other a mixture of aromatic compounds, leading to sorption times of 10 – 15 min due the large surface area attained with this method. PILs with aromatic moieties containing the bromide anion showed high selectivity towards polar compounds, due to the hydrogen basicity of the anion, and also towards aromatic analytes, due to the aromatic nature of styrene moieties and the cation pendant groups. The limits of detection fall in the sub ppb level, while relative standard deviations and reproducibility from fiber-to-fiber found maximums of 16.2% and 22.5%, respectively. Furthermore, the PIL based fibers showed up to 90% higher extraction efficiencies compared to the commercial fibers of polydimethylsiloxane and polyacrylate.
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- 2018
10. Thrombospondin-1 promotes matrix homeostasis by interacting with collagen and lysyl oxidase precursors and collagen cross-linking sites
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Nicholas Pugh, Josephine C. Adams, Richard W. Farndale, Arkadiusz Bonna, Silvia Rosini, and David J.S. Hulmes
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0301 basic medicine ,Male ,Sequence Homology ,Lysyl oxidase ,Matrix metalloproteinase ,Matrix (biology) ,Biochemistry ,Collagen Type I ,Extracellular matrix ,Protein-Lysine 6-Oxidase ,Thrombospondin 1 ,03 medical and health sciences ,Mice ,0302 clinical medicine ,medicine ,Extracellular ,Animals ,Homeostasis ,Humans ,Amino Acid Sequence ,Fibroblast ,Thrombospondins ,Molecular Biology ,Cells, Cultured ,Skin ,Mice, Knockout ,Extracellular Matrix Proteins ,Chemistry ,Cell Biology ,Fibroblasts ,Cell biology ,Extracellular Matrix ,Mice, Inbred C57BL ,030104 developmental biology ,medicine.anatomical_structure ,Cross-Linking Reagents ,030220 oncology & carcinogenesis ,Intracellular - Abstract
Fibrillar collagens of the extracellular matrix are critical for tissue structure and physiology; however, excessive or abnormal deposition of collagens is a defining feature of fibrosis. Regulatory mechanisms that act on collagen fibril assembly potentially offer new targets for antifibrotic treatments. Tissue weakening, altered collagen fibril morphologies, or both, are shared phenotypes of mice lacking matricellular thrombospondins. Thrombospondin-1 (TSP1) plays an indirect role in collagen homeostasis through interactions with matrix metalloproteinases and transforming growth factor–1 (TGF-1). We found that TSP1 also affects collagen fibril formation directly. Compared to skin from wild-type mice, skin from Thbs1-/- mice had reduced collagen cross-linking and reduced prolysyl oxidase (proLOX) abundance with increased conversion to catalytically active LOX. In vitro, TSP1 bound to both the C-propeptide domain of collagen I and the highly conserved KGHR sequences of the collagen triple-helical domain that participate in cross-linking. TSP1 also bound to proLOX and inhibited proLOX processing by bone morphogenetic protein-1. In human dermal fibroblasts (HDFs), TSP1 and collagen I colocalized in intracellular vesicles and on extracellular collagen fibrils, whereas TSP1 and proLOX colocalized only in intracellular vesicles. Inhibition of LOX-mediated collagen cross-linking did not prevent the extracellular association between collagen and TSP1; however, treatment of HDFs with KGHR-containing, TSP1-binding, triple-helical peptides disrupted the collagen-TSP1 association, perturbed the collagen extracellular matrix, and increased myofibroblastic differentiation in a manner that depended on TGF- receptor 1. Thus, the extracellular KGHR-dependent interaction of TSP1 with fibrillar collagens contributes to fibroblast homeostasis.
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- 2018
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11. Layer-by-layer coated imidazolium – styrene copolymers fibers for improved headspace-solid phase microextraction analysis of aromatic compounds
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Kari Vijayakrishna, Armando J. D. Silvestre, Isabel M. Marrucho, Nellepalli Pothanagandhi, and David J.S. Patinha
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Materials science ,Polymers and Plastics ,General Chemical Engineering ,SPME ,02 engineering and technology ,Solid-phase microextraction ,01 natural sciences ,Biochemistry ,Styrene ,chemistry.chemical_compound ,Materials Chemistry ,Copolymer ,Environmental Chemistry ,Thermal stability ,010401 analytical chemistry ,Layer by layer ,Poly(ionic liquids) ,Chain transfer ,General Chemistry ,Solid phase microextraction ,021001 nanoscience & nanotechnology ,Layer-by-layer ,0104 chemical sciences ,BTEX extraction ,Chemical engineering ,chemistry ,Polymerization ,Ionic liquid ,0210 nano-technology ,Spray coating - Abstract
The design of poly(ionic liquids) (PILs) and their application as solid phase microextraction (SPME) fibers has been attracting enormous attention mainly due to the need for new SPME coating materials with improved analytical sensitivity. In this work, the tunability of PILs is explored by preparing different imidazolium monomers bearing benzyl, naphtylmethyl or pentyl pending groups that were subsequently co-polymerized, by reversible addition–fragmentation chain transfer (RAFT) polymerization with styrene. The obtained co-polymers showed excellent thermal stability up to 275 °C, with no melting point up to 250 °C. SPME fibers were prepared by an innovative approach based on layer-by-layer spray coating. The thin (
- Published
- 2018
12. The role of water in cholinium carboxylate ionic liquid’s aqueous solutions
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Liliana C. Tomé, Cristina Silva Pereira, Luís Paulo N. Rebelo, Helga Garcia, Isabel M. Marrucho, Rui Ferreira, and David J.S. Patinha
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chemistry.chemical_classification ,Aqueous solution ,Inorganic chemistry ,Solvation ,Medicinal chemistry ,Atomic and Molecular Physics, and Optics ,Ion ,chemistry.chemical_compound ,Malonate ,chemistry ,Ionic liquid ,Proton NMR ,General Materials Science ,Carboxylate ,Physical and Theoretical Chemistry ,Alkyl - Abstract
Binary systems composed of water and cholinium carboxylate ionic liquids, namely cholinium lactate ([Ch][Lac]), cholinium propanoate ([Ch][Prop]) and cholinium malonate ([Ch][Mal]) were studied from the neat ionic liquid to very diluted aqueous solutions. Densities and viscosities were measured and atypical behaviors were observed, such as the increasing density of the binary [Ch][Prop] + H2O mixtures with increasing water content. In order to get molecular level insights on the IL + H2O solvation schemes, 1H NMR studies were performed. Large deviations were obtained in the anions resonances when compared to those of the cation suggesting that water interacts preferentially with the anion counter-part of the ionic liquid. The increasing density of [Ch][Prop] + H2O system with increasing water content can be related to the orientation of the alkyl chains, as a result of their nanoscale organization. This behavior was confirmed through the study of the thermophysical properties of [Ch][Hex] + H2O mixtures, where this phenomenon is known to occur.
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- 2015
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13. Expanding the Applicability of Poly(Ionic Liquids) in Solid Phase Microextraction: Pyrrolidinium Coatings
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David J.S. Patinha, Mehmet Isik, David Mecerreyes, Liliana C. Tomé, Armando J. D. Silvestre, and Isabel M. Marrucho
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steel coatings ,Materials science ,sorbent coatings ,gas chromatography ,polymeric ionic liquid ,water ,02 engineering and technology ,fibers ,Solid-phase microextraction ,chemistry ,lcsh:Technology ,01 natural sciences ,Article ,chemistry.chemical_compound ,poly(ionic liquids) ,General Materials Science ,Thermal stability ,lcsh:Microscopy ,lcsh:QC120-168.85 ,Chromatography ,lcsh:QH201-278.5 ,Polydimethylsiloxane ,lcsh:T ,010401 analytical chemistry ,Extraction (chemistry) ,Sorption ,021001 nanoscience & nanotechnology ,solid phase microextraction ,0104 chemical sciences ,Photopolymer ,lcsh:TA1-2040 ,silica ,Ionic liquid ,extraction ,systems ,lcsh:Descriptive and experimental mechanics ,lcsh:Electrical engineering. Electronics. Nuclear engineering ,Gas chromatography ,UV-photopolymerization ,lcsh:Engineering (General). Civil engineering (General) ,0210 nano-technology ,lcsh:TK1-9971 ,Nuclear chemistry - Abstract
Crosslinked pyrrolidinium-based poly(ionic liquids) (Pyrr-PILs) were synthesized through a fast, simple, and solventless photopolymerization scheme, and tested as solid phase microextraction (SPME) sorbents. A series of Pyrr-PILs bearing three different alkyl side chain lengths with two, eight, and fourteen carbons was prepared, characterized, and homogeneously coated on a steel wire by using a very simple procedure. The resulting coatings showed a high thermal stability, with decomposition temperatures above 350 degrees C, excellent film stability, and lifetime of over 100 injections. The performance of these PIL-based SPME fibers was evaluated using a mixture of eleven organic compounds with different molar volumes and chemical functionalities (alcohols, ketones, and monoterpenes). The Pyrr-PIL fibers were obtained as dense film coatings, with 67 mu m thickness, with an overall sorption increase of 90% and 55% as compared to commercial fibers of Polyacrylate (85 mu m) (PA85) and Polydimethylsiloxane (7 mu m) (PDMS7) coatings, respectively. A urine sample doped with the sample mixture was used to study the matrix effect and establish relative recoveries, which ranged from 60.2% to 104.1%. David J. S. Patinha, and Liliana C. Tome are grateful to FCT (Fundacao para a Ciencia e a Tecnologia) for the PhD research grant SFRH/BD/97042/2013 and the Post-Doctoral research grant (SFRH/BPD/101793/2014), respectively. David J. S. Patinha also thanks the financial support from COST-Exil Project 1206. The NMR data was acquired at CERMAX (Centro de Ressonncia Magnetica Antnio Xavier) which is a member of the National NMR network. This work was partially supported by FCT through Research Unit GREEN-it " Bioresources for Sustainability" (UID/Multi/04551/2013) and the Associate Laboratory CICECO Aveiro Institute of materials (UID/CTM/50011/2013).
- Published
- 2017
14. Procollagen C-proteinase Enhancer Stimulates Procollagen Processing by Binding to the C-propeptide Region Only*
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Cécile Bijakowski, Jean-Marie Bourhis, Sandrine Vadon-Le Goff, Walter Stöcker, Nicolas Raynal, Florence Ruggiero, Daniel Kronenberg, Richard W. Farndale, Catherine Moali, and David J.S. Hulmes
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animal structures ,Glycosylation ,Biology ,Biochemistry ,Bone morphogenetic protein 1 ,Protein Structure, Secondary ,Bone Morphogenetic Protein 1 ,03 medical and health sciences ,chemistry.chemical_compound ,Metalloprotease ,0302 clinical medicine ,Humans ,Binding site ,Enhancer ,Molecular Biology ,030304 developmental biology ,Cell Line, Transformed ,Glycoproteins ,chemistry.chemical_classification ,0303 health sciences ,Metalloproteinase ,Extracellular Matrix Proteins ,Binding Sites ,integumentary system ,Cell Biology ,Enzymatic Processing ,Fibrosis ,Extracellular Matrix ,Procollagen peptidase ,Collagen Type III ,chemistry ,030220 oncology & carcinogenesis ,embryonic structures ,Enzymology ,Collagen ,Glycoprotein ,Protein Processing, Post-Translational ,Triple helix - Abstract
Background: Procollagen C-proteinase enhancer-1 (PCPE-1) is an extracellular glycoprotein that increases activity of certain zinc metalloproteinases involved in tissue development and repair. Results: PCPE-1 binds uniquely to the C-propeptide region of the procollagen molecule. Conclusion: PCPE-1 enhances proteolysis by binding solely to the procollagen C-propeptides. Significance: These data may lead to future applications in the development of antifibrotic therapies., Bone morphogenetic protein-1 (BMP-1) and the tolloid-like metalloproteinases control several aspects of embryonic development and tissue repair. Unlike other proteinases whose activities are regulated mainly by endogenous inhibitors, regulation of BMP-1/tolloid-like proteinases relies mostly on proteins that stimulate activity. Among these, procollagen C-proteinase enhancers (PCPEs) markedly increase BMP-1/tolloid-like proteinase activity on fibrillar procollagens, in a substrate-specific manner. Here, we performed a detailed quantitative study of the binding of PCPE-1 and of its minimal active fragment (CUB1-CUB2) to three regions of the procollagen III molecule: the triple helix, the C-telopeptide, and the C-propeptide. Contrary to results described elsewhere, we found the PCPE-1-binding sites to be located exclusively in the C-propeptide region. In addition, binding and enhancing activities were found to be independent of the glycosylation state of the C-propeptide. These data exclude previously proposed mechanisms for the action of PCPEs and also suggest new mechanisms to explain how these proteins can stimulate BMP-1/tolloid-like proteinases by up to 20-fold.
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- 2011
15. Strong Cooperativity and Loose Geometry between CUB Domains Are the Basis for Procollagen C-Proteinase Enhancer Activity
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Bernard Font, Catherine Moali, Jean-Marie Bourhis, Daniel Kronenberg, David J.S. Hulmes, Sandrine Vadon-Le Goff, and Denise Eichenberger
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Cooperativity ,Plasma protein binding ,Transfection ,Binding, Competitive ,Biochemistry ,Bone morphogenetic protein 1 ,Bone Morphogenetic Protein 1 ,Cell Line ,Humans ,Amino Acid Sequence ,Binding site ,Enhancer ,Molecular Biology ,Glycoproteins ,Extracellular Matrix Proteins ,Binding Sites ,Enzyme Catalysis and Regulation ,Chemistry ,Circular Dichroism ,Cell Biology ,CUB domain ,Kinetics ,Procollagen peptidase ,Mutation ,Biophysics ,Electrophoresis, Polyacrylamide Gel ,Linker ,Procollagen ,Protein Binding - Abstract
Procollagen C-proteinase enhancers (PCPE-1 and -2) specifically activate bone morphogenetic protein-1 (BMP-1) and other members of the tolloid proteinase family during C-terminal processing of fibrillar collagen precursors. PCPEs consist of two CUB domains (CUB1 and CUB2) and one NTR domain separated by one short and one long linker. It was previously shown that PCPEs can strongly interact with procollagen molecules, but the exact mechanism by which they enhance BMP-1 activity remains largely unknown. Here, we used a series of deletion mutants of PCPE-1 and two chimeric constructs with repetitions of the same CUB domain to study the role of each domain and linker. Out of all the forms tested, only those containing both CUB1 and CUB2 were capable of enhancing BMP-1 activity and binding to a mini-procollagen substrate with nanomolar affinity. Both these properties were lost by individual CUB domains, which had dissociation constants at least three orders of magnitude higher. In addition, none of the constructs tested could inhibit PCPE activity, although CUB2CUB2NTR was found to modulate BMP-1 activity through direct complex formation with the enzyme, resulting in a decreased rate of substrate processing. Finally, increasing the length of the short linker between CUB1 and CUB2 was without detrimental effect on both activity and substrate binding. These data support the conclusion that CUB1 and CUB2 bind to the procollagen substrate in a cooperative manner, involving the short linker that provides a flexible tether linking the two binding regions.
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- 2009
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16. Trimerization of collagen IX α-chains does not require the presence of the COL1 and NC1 domains
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William Beckett, Juha Jäälinoja, Leena Ala-Kokko, David J.S. Hulmes, and Joni Ylostalo
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Coiled coil ,Protein Folding ,Chemistry ,Stereochemistry ,Circular Dichroism ,Molecular Sequence Data ,Cell Biology ,Biochemistry ,Collagen Type IX ,Recombinant Proteins ,Protein Structure, Tertiary ,Folding (chemistry) ,Crystallography ,Amino Acid Sequence ,Molecular Biology ,Triple helix ,Cysteine - Abstract
Collagen IX is a heterotrimer of three α-chains, which consists of three COL domains (collagenous domains) (COL1–COL3) and four NC domains (non-collagenous domains) (NC1–NC4), numbered from the C-terminus. Although collagen IX chains have been shown to associate via their C-terminal NC1 domains and form a triple helix starting from the COL1 domain, it is not known whether chain association can occur at other sites and whether other collagenous and non-collagenous regions are involved. To address this question, we prepared five constructs, two long variants (beginning at the NC4 domain) and three short variants (beginning at the COL2 domain), all ending at the NC2 domain (or NC2 replaced by NC1), to study association and selection of collagen IX α-chains. Both long variants were able to associate with NC1 or NC2 at the C-terminus and form various disulfide-bonded trimers, but the specificity of chain selection was diminished compared with full-length chains. Trimers of the long variant ending at NC2 were shown to be triple helical by CD. Short variants were not able to assemble into disulfide-bonded trimers even in the presence of both conserved cysteine residues from the COL1–NC1 junction. Our results demonstrate that collagen IX α-chains can associate in the absence of COL1 and NC1 domains to form a triple helix, but the COL2–NC2 region alone is not sufficient for trimerization. The results suggest that folding of collagen IX is a co-operative process involving multiple COL and NC domains and that the COL1–NC1 region is important for chain specificity.
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- 2007
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17. Insights into How CUB Domains Can Exert Specific Functions while Sharing a Common Fold
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Guillaume Blanc, Catherine Moali, Denise Eichenberger, Sylvie Ricard-Blum, Christophe Moreau, David J.S. Hulmes, and Bernard Font
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Alanine ,chemistry.chemical_classification ,Proteases ,Mutant ,Sequence alignment ,Cell Biology ,Biology ,Biochemistry ,Amino acid ,chemistry ,Binding site ,Enhancer ,Glycoprotein ,Molecular Biology - Abstract
Procollagen C-proteinase enhancers (PCPE-1 and -2) are extracellular glycoproteins that can stimulate the C-terminal processing of fibrillar procollagens by tolloid proteinases such as bone morphogenetic protein-1. They consist of two CUB domains (CUB1 and -2) that alone account for PCPE-enhancing activity and one C-terminal NTR domain. CUB domains are found in several extracellular and plasma membrane-associated proteins, many of which are proteases. We have modeled the structure of the CUB1 domain of PCPE-1 based on known three-dimensional structures of CUB-containing proteins. Sequence alignment shows conserved amino acids, notably two acidic residues (Asp-68 and Asp-109) involved in a putative surface-located calcium binding site, as well as a conserved tyrosine residue (Tyr-67). In addition, three residues (Glu-26, Thr-89, and Phe-90) are found only in PCPE CUB1 domains, in putative surface-exposed loops. Among the conserved residues, it was found that mutations of Asp-68 and Asp-109 to alanine almost completely abolished PCPE-1 stimulating activity, whereas mutation of Tyr-67 led to a smaller reduction of activity. Among residues specific to PCPEs, mutation of Glu-26 and Thr-89 had little effect, whereas mutation of Phe-90 dramatically decreased the activity. Changes in activity were paralleled by changes in binding of different PCPE-1 mutants to a mini-procollagen III substrate, as shown by surface plasmon resonance. We conclude that PCPE-stimulating activity requires a calcium binding motif in the CUB1 domain that is highly conserved among CUB-containing proteins but also that PCPEs contain specific sites that could become targets for the development of novel anti-fibrotic therapies.
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- 2007
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18. BMP-1/tolloid-like proteinases synchronize matrix assembly with growth factor activation to promote morphogenesis and tissue remodeling
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Catherine Moali, Sandrine Vadon-Le Goff, David J.S. Hulmes, Laboratoire de Biologie Tissulaire et d'ingénierie Thérapeutique UMR 5305 (LBTI), Université Claude Bernard Lyon 1 (UCBL), and Université de Lyon-Université de Lyon-Centre National de la Recherche Scientifique (CNRS)
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TGF-β ,Proteases ,Biochemistry & Molecular Biology ,medicine.medical_treatment ,Morphogenesis ,Angiogenesis Inhibitors ,[SDV.BC]Life Sciences [q-bio]/Cellular Biology ,Matrix (biology) ,Bone morphogenetic protein ,Bone Morphogenetic Protein 1 ,medicine ,Animals ,Humans ,Regeneration ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Molecular Biology ,[SDV.BDD]Life Sciences [q-bio]/Development Biology ,Metalloproteinase ,ComputingMilieux_MISCELLANEOUS ,Extracellular Matrix Proteins ,Chemistry ,Extracellular matrix assembly ,Growth factor ,[SDV.BDD.MOR]Life Sciences [q-bio]/Development Biology/Morphogenesis ,06 Biological Sciences ,Fibrosis ,3. Good health ,Extracellular Matrix ,Procollagen peptidase ,Biochemistry ,Tumor progression ,Intercellular Signaling Peptides and Proteins ,Osteogenesis imperfecta ,Collagen - Abstract
Bone morphogenetic protein-1 (BMP-1)/tolloid-like proteinases, here called BTPs, include the proteases originally identified for their roles in the C-terminal maturation of fibrillar procollagens ("procollagen C-proteinase"). Though numerous other substrates have since been discovered, the BTPs remain the main proteases involved in extracellular matrix assembly with little or no implication in matrix degradation. During the same period however, the BTPs have also become established as important proteases in the activation of growth factors, including TGF-β1, BMP-2/-4, GDF-8/-11 and IGFs, as well as the release of anti-angiogenic fragments from parent proteins. The BTPs are therefore key players in many pathophysiological processes such as morphogenesis, tissue repair and tumor progression. This mini-review summarizes our current knowledge of the functions of BTPs, their substrates and unusual mechanisms of regulation, and discusses their potential as new targets for future therapies.
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- 2015
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19. Substrate-specific Modulation of a Multisubstrate Proteinase
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Bernard Font, Catherine Moali, Florence Ruggiero, Åke Oldberg, Vincent François, Patricia Rousselle, Leena Bruckner-Tuderman, Denise Eichenberger, and David J.S. Hulmes
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0303 health sciences ,biology ,Chemistry ,030302 biochemistry & molecular biology ,Signal transducing adaptor protein ,macromolecular substances ,Cell Biology ,Matrix metalloproteinase ,Matrix (biology) ,Biochemistry ,03 medical and health sciences ,Procollagen peptidase ,Laminin ,biology.protein ,Extracellular ,Chordin ,Cell adhesion ,Molecular Biology ,030304 developmental biology - Abstract
Members of the bone morphogenetic protein-1/tolloid (BMP-1/Tld) family of metalloproteinases, also known as procollagen C-proteinases (PCPs), control multiple biological events (including matrix assembly, cross-linking, cell adhesion/migration and pattern formation) through enzymatic processing of several extracellular substrates. PCP activities on fibrillar procollagens can be stimulated by another family of extracellular proteins, PCP enhancers (PCPE-1, PCPE-2), which lack intrinsic enzymatic activity. While PCPs have multiple substrates, the extent to which PCPEs is involved in the processing of proteins other than fibrillar procollagens is unknown. In the experiments reported here, PCPE-1 was found to have no effect on the in vitro BMP-1 processing of procollagen VII, the procollagen V N-propeptide, the laminin 5 γ2 chain, osteoglycin, prolysyl oxidase, or chordin. In contrast, PCPE-1 enhanced C-terminal processing of human fibrillar procollagen III but only when this substrate was in its native, disulfide-bonded conformation. Surprisingly, processing of procollagen III continued to be enhanced when essentially all the triple-helical region was removed. These and previous results (Ricard-Blum, S., Bernocco, S., Font, B., Moali, C., Eichenberger, D., Farjanel, J., Burchardt, E. R., van der Rest, M., Kessler, E., and Hulmes, D. J. S. (2002) J. Biol. Chem. 277, 33864-33869; Bernocco, S., Steiglitz, B. M., Svergun, D. I., Petoukhov, M. V., Ruggiero, F., Ricard-Blum, S., Ebel, C., Geourjon, C., Deleage, G., Font, B., Eichenberger, D., Greenspan, D. S., and Hulmes, D. J. S. (2003) J. Biol. Chem. 278, 7199-7205) indicate that the mechanism of PCPE-1 action involves recognition sites in both the C-propeptide domain and in the C-telopeptide region of the procollagen molecule. PCPEs therefore define a new class of extracellular adaptor proteins that stimulate proteinase activity in a substrate-specific manner, thereby providing a new target for the selective regulation of PCP activity on fibrillar procollagen substrates.
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- 2005
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20. Lysyl Oxidase-like Protein from Bovine Aorta
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Claudine Gleyzal, Pascal Sommer, Bernard Font, Jean Farjanel, Efrat Kessler, David J.S. Hulmes, Agnes Borel, and Denise Eichenberger
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chemistry.chemical_classification ,integumentary system ,biology ,Lysyl oxidase ,macromolecular substances ,Cell Biology ,Biochemistry ,eye diseases ,In vitro ,Bone morphogenetic protein 1 ,Amino acid ,Residue (chemistry) ,Enzyme ,chemistry ,cardiovascular system ,biology.protein ,Antibody ,Molecular Biology ,Elastin - Abstract
Recently several cDNAs have been described encoding lysyl oxidase-like proteins. Their deduced amino acid sequences are characterized by a strong similarity in the C-terminal region, corresponding to the lysyl oxidase family catalytic domain, and by marked differences in the N-terminal regions. Different biological functions have been described for lysyl oxidases in addition to their traditionally assumed cross-linking role. To answer the question of whether these different functions are carried out by different lysyl oxidases, purified and active forms of these enzymes are required. At present only the classical form of lysyl oxidase has been purified and characterized. The purpose of this study was to isolate and characterize the lysyl oxidase-like protein. In view of the strong sequence homology with the C-terminal domain of other lysyl oxidases, we chose to purify the protein from bovine aorta using antibodies specific to the N-terminal domain of the proenzyme. We have isolated a 56-kDa protein identified by amino acid sequencing as the bovine lysyl oxidase-like precursor, which is cleaved at the Arg-Arg-Arg sequence at positions 89-91 by a furin-like activity, as revealed after deblocking of the N-terminal residue. The immunopurified protein was largely inactive, but further processing in vitro by bone morphogenetic protein-1 led to an enzyme that was active on elastin and collagen substrates.
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- 2001
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21. Control of Heterotypic Fibril Formation by Collagen V Is Determined by Chain Stoichiometry
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David J.S. Hulmes, Simonetta Bernocco, Robert Garrone, Hélène Chanut-Delalande, Agnès Fichard, and Florence Ruggiero
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Gene isoform ,Chemistry ,Thrombin ,macromolecular substances ,Cell Biology ,Fibril ,Immunohistochemistry ,Biochemistry ,law.invention ,Extracellular matrix ,Kinetics ,law ,Recombinant DNA ,Biophysics ,Animals ,Cattle ,Collagen ,Molecular Biology ,Linker ,Stoichiometry ,Triple helix ,Macromolecule - Abstract
Although the collagen V heterotrimer is known to be involved in the control of fibril assembly, the role of the homotrimer in fibrillar organization has not yet been examined. Here, the production of substantial amounts of recombinant collagen V homotrimer has allowed a detailed study of its role in homotypic and heterotypic fibril formation. After removal of terminal regions by pepsin digestion, both the collagen V heterotrimer and homotrimer formed thin homotypic fibrils, thus showing that diameter limitation is at least in part an intrinsic property of the collagen V triple helix. When mixed with collagen I, however, various complementary approaches indicated that the collagen V heterotrimer and homotrimer exerted different effects in heterotypic fibril formation. Unlike the heterotrimer, which was buried in the fibril interior, the homotrimer was localized as thin filamentous structures at the surface of wide collagen I fibrils and did not regulate fibril assembly. Its localization at the fibril surface suggests that the homotrimer can act as a molecular linker between collagen fibrils or macromolecules in the extracellular matrix or both. Thus, depending on their respective distribution in tissues, the different collagen V isoforms might fulfill specific biological functions.
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- 2001
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22. Liquid crystalline ordering of procollagen as a determinant of three-dimensional extracellular matrix architecture 1 1Edited by M. F. Moody
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Marie-Madeleine Giraud-Guille, Raquel Martin, David J.S. Hulmes, Jean Farjanel, Efrat Kessler, Denise Eichenberger, and Alain Colige
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Polarized light microscopy ,Chemistry ,Mesophase ,Fibril ,law.invention ,Extracellular matrix ,Procollagen peptidase ,Crystallography ,Structural Biology ,law ,Liquid crystal ,Molecule ,Crystallization ,Molecular Biology - Abstract
The precise molecular mechanisms that determine the three-dimensional architectures of tissues remain largely unknown. Within tissues rich in extracellular matrix, collagen fibrils are frequently arranged in a tissue-specific manner, as in certain liquid crystals. For example, the continuous twist between fibrils in compact bone osteons resembles a cholesteric mesophase, while in tendon, the regular, planar undulation, or “crimp”, is akin to a precholesteric mesophase. Such analogies suggest that liquid crystalline organisation plays a role in the determination of tissue form, but it is hard to see how insoluble fibrils could spontaneously and specifically rearrange in this way. Collagen molecules, in dilute acid solution, are known to form nematic, precholesteric and cholesteric phases, but the relevance to physiological assembly mechanisms is unclear. In vivo , fibrillar collagens are synthesised in soluble precursor form, procollagens, with terminal propeptide extensions. Here, we show, by polarized light microscopy of highly concentrated (5–30 mg/ml) viscous drops, that procollagen molecules in physiological buffer conditions can also develop long-range nematic and precholesteric liquid crystalline ordering extending over 100 μm 2 domains, while remaining in true solution. These observations suggest the novel concept that supra-fibrillar tissue architecture is determined by the ability of soluble precursor molecules to form liquid crystalline arrays, prior to fibril assembly.
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- 2000
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23. Degenerative joint disease in poultry — differences in composition and morphology of articular cartilage are associated with strain susceptibility
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David J.S. Hulmes, J. M. Anderson-Mackenzie, and B.H. Thorp
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Cartilage, Articular ,musculoskeletal diseases ,Pathology ,medicine.medical_specialty ,animal structures ,Genotype ,animal diseases ,Tibiotarsus ,Fowl ,Tarsometatarsus ,Osteoarthritis ,Uronic acid ,Biology ,Tarsus, Animal ,Chondrocyte ,chemistry.chemical_compound ,Risk Factors ,medicine ,Animals ,Genetic Predisposition to Disease ,Poultry Diseases ,General Veterinary ,Cartilage ,Synovial Membrane ,Broiler ,food and beverages ,Humerus ,biology.organism_classification ,medicine.disease ,Uronic Acids ,medicine.anatomical_structure ,chemistry ,Sprains and Strains ,Female ,Chickens - Abstract
The morphology and basic biochemical composition of articular cartilage from two strains of fowl were examined. Broiler breeder fowl are considered susceptible to degenerative joint disease (DJD); histological examination of one-year-old broiler breeders showed in some samples, articular cartilage thinning, fibrillation and chondrocyte cluster formation, features considered typical of DJD. Examination of similar samples from laying strain fowl showed only minor age-related changes such as some slight cartilage thinning and very mild fibrillation. The articular cartilage from the broiler breeder birds was significantly more hydrated with a higher uronic acid content than that of the laying strain birds. In addition, unloaded articular surfaces such as the proximal humerus had significantly higher amounts of uronic acid than the loaded cartilage surfaces of the proximal tarsometatarsus and the distal tibiotarsus; this suggested that the joint loading may have a role in any biochemical differences found between joints and between strains of fowl. These findings concur with other reports in mammals that showed increased hydration and uronic acid in association with early DJD and in models of osteoarthritis (OA). Thus, despite some differences between avian and mammalian articular cartilage, studies on avian DJD may give insights into mammalian disease.
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- 1997
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24. Cholinium-based supported ionic liquid membranes: a sustainable route for carbon dioxide separation
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Cristina Silva Pereira, Rui Ferreira, David J.S. Patinha, Luís Paulo N. Rebelo, Helga Garcia, Carmen S. R. Freire, Isabel M. Marrucho, and Liliana C. Tomé
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Carbon Sequestration ,Nitrogen ,General Chemical Engineering ,Inorganic chemistry ,Ionic Liquids ,GAS SEPARATIONS ,SOLUBILITY ,chemistry.chemical_compound ,DIFFUSIVITIES ,ANION ,Environmental Chemistry ,General Materials Science ,PERMEABILITY ,Gas separation ,Carboxylate ,BIOMATERIALS ,IMIDAZOLIUM ,Membranes, Artificial ,PERFORMANCE ,Permeation ,Carbon Dioxide ,Environmentally friendly ,Quaternary Ammonium Compounds ,General Energy ,Membrane ,chemistry ,Ionic liquid ,Carbon dioxide ,CO2 ,Methane ,CO2/N-2 SEPARATION - Abstract
Made available in DSpace on 2017-12-07T19:45:35Z (GMT). No. of bitstreams: 2 license.txt: 2154 bytes, checksum: 4b0f01eb19f34a0ae8b22225f6f5120c (MD5) Cholinium-based supported ionic liquid membranes A sustainable route for carbon dioxide separation_10.1002cssc.201300613.pdf: 494857 bytes, checksum: 554b1b09a61ceebeb2b6038e4f71d7b1 (MD5) Previous issue date: 2014
- Published
- 2013
25. Procollagen C-proteinase enhancer grasps the stalk of the C-propeptide trimer to boost collagen precursor maturation
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Sandrine Vadon-Le Goff, Nicole M. Thielens, Catherine Moali, Hassnae Afrache, David J.S. Hulmes, Daniel Kronenberg, Natacha Mariano, Jean-Marie Bourhis, Institut de biologie structurale (IBS - UMR 5075 ), Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Institut de Recherche Interdisciplinaire de Grenoble (IRIG), Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Thomas, Frank, Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Institut de Recherche Interdisciplinaire de Grenoble (IRIG), and Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Centre National de la Recherche Scientifique (CNRS)
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MESH: Extracellular Matrix Proteins ,MESH: Bone Morphogenetic Protein 1 ,Trimer ,Polymerase Chain Reaction ,Bone Morphogenetic Protein 1 ,MESH: Circular Dichroism ,Extracellular matrix ,MESH: Recombinant Proteins ,Collagen Type III ,0302 clinical medicine ,MESH: Animals ,chemistry.chemical_classification ,MESH: Collagen Type III ,0303 health sciences ,Extracellular Matrix Proteins ,Multidisciplinary ,MESH: Kinetics ,[SDV.BBM.BS]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Structural Biology [q-bio.BM] ,Circular Dichroism ,MESH: Chromatography, Gel ,Biological Sciences ,Recombinant Proteins ,Cell biology ,Extracellular Matrix ,MESH: Surface Plasmon Resonance ,MESH: Mutagenesis, Site-Directed ,Biochemistry ,030220 oncology & carcinogenesis ,MESH: HEK293 Cells ,Chromatography, Gel ,Electrophoresis, Polyacrylamide Gel ,Materials science ,[SDV.BBM.BS] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Structural Biology [q-bio.BM] ,MESH: Glycoproteins ,MESH: Extracellular Matrix ,Bone morphogenetic protein 1 ,03 medical and health sciences ,Scattering, Small Angle ,Animals ,Humans ,Binding site ,Enhancer ,MESH: Scattering, Small Angle ,030304 developmental biology ,Glycoproteins ,Binding Sites ,MESH: Humans ,MESH: Polymerase Chain Reaction ,Surface Plasmon Resonance ,Procollagen peptidase ,Kinetics ,HEK293 Cells ,chemistry ,MESH: Binding Sites ,Mutagenesis, Site-Directed ,Glycoprotein ,MESH: Electrophoresis, Polyacrylamide Gel - Abstract
International audience; Tight regulation of collagen fibril deposition in the extracellular matrix is essential for normal tissue homeostasis and repair, defects in which are associated with several degenerative or fibrotic disorders. A key regulatory step in collagen fibril assembly is the C-terminal proteolytic processing of soluble procollagen precursors. This step, carried out mainly by bone morphogenetic protein-1/tolloid-like proteinases, is itself subject to regulation by procollagen C-proteinase enhancer proteins (PCPEs) which can dramatically increase bone morphogenetic protein-1/tolloid-like proteinase activity, in a substrate-specific manner. Although it is known that this enhancing activity requires binding of PCPE to the procollagen C-propeptide trimer, identification of the precise binding site has so far remained elusive. Here, use of small-angle X-ray scattering provides structural data on this protein complex indicating that PCPE binds to the stalk region of the procollagen C-propeptide trimer, where the three polypeptide chains associate together, at the junction with the base region. This is supported by site-directed mutagenesis, which identifies two highly conserved, surface-exposed lysine residues in this region of the trimer that are essential for binding, thus revealing structural parallels with the interactions of Complement C1r/C1s, Uegf, BMP-1 (CUB) domain-containing proteins in diverse biological systems such as complement activation, receptor signaling, and transport. Together with detailed kinetics and interaction analysis, these results provide insights into the mechanism of action of PCPEs and suggest clear strategies for the development of novel antifibrotic therapies.
- Published
- 2013
26. Lipophilic extractives from the bark of Eucalyptus grandis x globulus, a rich source of methyl morolate: Selective extraction with supercritical CO2
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Juan José Villaverde, David J.S. Patinha, Carlos M. Silva, Armando J. D. Silvestre, Carmen S. R. Freire, A. S. Silva, Rui M. A. Domingues, and C. Pascoal Neto
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GAS-CHROMATOGRAPHY ,Fraction (chemistry) ,PENTACYCLIC TRITERPENES ,010402 general chemistry ,Mass spectrometry ,CHEMICAL-COMPOSITION ,01 natural sciences ,URSOLIC ACID ,chemistry.chemical_compound ,Organic chemistry ,Chemical composition ,Oleanane ,CHROMATOGRAPHY-MASS SPECTROMETRY ,Chromatography ,010405 organic chemistry ,Chemistry ,Extraction (chemistry) ,15. Life on land ,OLEANOLIC ACID ,MORONIC ACID-DERIVATIVES ,Eucalyptus ,Supercritical fluid ,0104 chemical sciences ,ANTI-AIDS AGENTS ,visual_art ,VALUE TRITERPENIC COMPOUNDS ,visual_art.visual_art_medium ,Bark ,Agronomy and Crop Science ,FLUID EXTRACTION - Abstract
The chemical composition of the lipohilic extracts of the inner and outer barks of Eucalyptus grandis x globulus, cultivated in Portugal, was studied by gas chromatography-mass spectrometry. The two bark fractions show different chemical compositions. beta-Sitosterol is the most abundant compound in the inner bark (82 mg kg(-1)), while long chain aliphatic alcohols are the main family of components accounting for 208 mg kg(-1). In the outer bark fraction, triterpenic compounds (8.5 g kg(-1)) are the most abundant ones from which methyl morolate (methyl 3-hydroxyolean-18-en-28-oate) is the chief component (3 g kg(-1)). This oleanane type tritepenic acid methyl ester was identified here for the first time as a component of Eucalyptus bark tissues using GC-MS and NMR. Other high value triterpenic acids such as ursolic, oleanolic and betulinic acids, accounting for 1.3, 0.9 and 0.6 g kg(-1), respectively, were also detected in this fraction. Finally, the extraction of methyl morolate with supercritical CO2 was also carried out aiming at designing an environmentally friendly extraction alternative for this abundant compound. At 20 MPa and 333K, the methyl morolate extraction attained a plateau at 6h. In the whole, the acetylated triterpenic acids were more significantly extracted when compared to their free acids, which is directly related with the less polar nature of the former molecules. (C) 2012 Elsevier B.V. All rights reserved.
- Published
- 2013
27. Ionic liquids based aqueous biphasic systems: Effect of the alkyl chains in the cation versus in the anion
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Filipa Alves, Isabel M. Marrucho, Luís Paulo N. Rebelo, and David J.S. Patinha
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EXTRACTION ,Inorganic chemistry ,02 engineering and technology ,SALTS ,010402 general chemistry ,01 natural sciences ,Ion ,chemistry.chemical_compound ,Phase (matter) ,PHOSPHATE ,WATER ,General Materials Science ,Physical and Theoretical Chemistry ,TEMPERATURE ,Alkyl ,2-PHASE SYSTEMS ,chemistry.chemical_classification ,Aqueous solution ,Chemistry ,Charge density ,021001 nanoscience & nanotechnology ,C4mim ,Atomic and Molecular Physics, and Optics ,0104 chemical sciences ,Partition coefficient ,Ionic liquid ,SEPARATION ,0210 nano-technology ,SULFATE - Abstract
The use of alkyl-3-methylimidazolium alkylsulfonate ionic liquids for implementing aqueous biphasic systems is studied in this work for the first time. The ability of high charge density inorganic salts, such as K3PO4, to promote phase segregation in aqueous solutions containing the ionic liquids 1,3-dimethylimidazolium methylsulfonate ([C(1)mim][C1SO3]), 1-ethyl-3-methylimidazolium hexylsulfonate ([C(2)mim][C6SO3]), 1-ethyl-3-methylimidazolium butylsulfonate ([C(2)mim][C4SO3]), 1-butyl-3-methylimidazolium methylsulfonate ([C(4)mim][C1SO3]), 1-butyl-3-methylimidazolium ethylsulfonate ([C(4)mim][C2SO3]), 1-pentyl-3-methylimidazolium methylsulfonate ([C(5)mim][C1SO3]), 1-hexyl-3-methylimidazolium methylsulfonate ([C(6)mim][C1SO3]) and 1-hexyl-3-methylimidazolium ethylsulfonate ([C(6)mim][C2SO3]) was experimentally determined at 298.15 K and atmospheric pressure. In general, the hydrophobicity of the ionic liquids studied is affected by the increase of the alkyl chain length. However, the position of the alkyl chain, whether in the cation or in the anion affects in a different way the lipophilic effect of the ionic liquid. Two ionic liquids with the same number of carbon atoms, the one with a longer chain in the anion is the more hydrophobic. Furthermore, four ionic liquids were chosen to extract the aminoacid L-tryptophan from aqueous solutions. The chain lengths of the anion or cation were fixed and the partition coefficients compared. The extractions, carried out at 298.15 K, showed the good extractive power of these ionic liquids and also that the less hydrophobic ionic liquids have the better extraction coefficients. Overall, the results from this work identify relations between the length and position of the alkyl chain with the hydrophobicity and also with the extractive power of the imidazolium-alkylsulfonate based ionic liquids. (c) 2013 Elsevier Ltd. All rights reserved.
- Published
- 2013
28. CO2 separation applying ionic liquid mixtures: the effect of mixing different anions on gas permeation through supported ionic liquid membranes
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Luís Paulo N. Rebelo, Liliana C. Tomé, Isabel M. Marrucho, David J.S. Patinha, and Carmen S. R. Freire
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Nitrile ,General Chemical Engineering ,Inorganic chemistry ,Analytical chemistry ,02 engineering and technology ,SOLUBILITY ,010402 general chemistry ,01 natural sciences ,chemistry.chemical_compound ,CARBON-DIOXIDE ,Molar volume ,Solubility ,Dicyanamide ,TEMPERATURE ,IMIDAZOLIUM ,OF-THE-ART ,Thiocyanate ,DIFFUSIVITY ,General Chemistry ,Permeation ,MIXED-GAS ,PERFORMANCE ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,CAPTURE ,Membrane ,chemistry ,Ionic liquid ,0210 nano-technology ,CO2/N-2 SEPARATION - Abstract
In order to increase flexibility in tailoring the permeability and selectivity of supported ionic liquid membranes (SILMs) for flue gas separation and natural gas purification, this work explores the use of ionic liquid mixtures. For that purpose, gas permeation properties of CO2, CH4 and N-2 in several binary ionic liquid mixtures based on a common cation ([C(2)mim](+)) and different anions such as bis(trifluoromethyl-sulfonyl) imide ([NTf2](-)), acetate ([Ac](-)), lactate ([Lac](-)), dicyanamide ([DCA](-)) and thiocyanate ([SCN](-)) were measured at 293 K using a time-lag apparatus. In addition to gas permeation results, the thermophysical properties of those mixtures, namely viscosity and density, were also determined so that trends between the two types of properties could be evaluated. The results show that mixing [Ac](-) or [Lac](-) with [NTf2](-) promotes the decrease of gas permeability and diffusivity of the SILMs based on those binary mixtures, essentially due to their high viscosities. The pure ionic liquids containing anions with nitrile groups, [DCA](-) or [SCN](-), and also their mixtures with [C(2)mim][NTf2] exhibit permselectivities ranging from 19.1 to 23.0 for CO2/CH4, and from 36.6 to 67.8 for CO2/N-2, as a consequence of a reduction in the CH4 and N-2 permeabilities, respectively. Furthermore, it is shown that mixing anions with different chemical features allows variations in ionic liquid viscosity and molar volume that impact the gas permeation properties of SILMs, offering a clear pathway for the optimization of their CO2 separation performances.
- Published
- 2013
29. Expression of active, human lysyl oxidase inEscherichia coli
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David J.S. Hulmes, M. Ouzzine, A. Boyd, and Deleage, Gilbert
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Signal peptide ,DNA, Complementary ,Molecular Sequence Data ,Biophysics ,Lysyl oxidase ,Biology ,medicine.disease_cause ,Biochemistry ,Protein-Lysine 6-Oxidase ,03 medical and health sciences ,Structural Biology ,Escherichia coli ,[SDV.BBM] Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Genetics ,medicine ,Humans ,Amino Acid Sequence ,Cloning, Molecular ,Molecular Biology ,Peptide sequence ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Bacteria ,030302 biochemistry & molecular biology ,Cell Biology ,Periplasmic space ,Molecular biology ,Fusion protein ,Recombinant Proteins ,Enzyme ,chemistry ,Copper amine oxidase ,biology.protein ,Protein expression ,Electrophoresis, Polyacrylamide Gel ,Elastin - Abstract
Lysyl oxidase (LO) is a copper amine oxidase of the extracellular matrix which initiates covalent cross-linking in collagens and elastin. Human LO was expressed in Escherichia coli. At 37 degrees C, large amounts of protein were obtained, but in the form of insoluble aggregates. Lowering the growth temperature, and reducing the amount of inducer, resulted in the production of soluble LO, which was active on a degrees [3H]lysine-labeled elastin substrate. LO was also targeted to the periplasm as a fusion protein with the pelb signal peptide. The periplasmic enzyme was soluble, active and inhibited by beta-aminopropionitrile. Production of the carbonyl co-factor is therefore not a limitation in the expression of active LO in bacteria.Lysyl oxidase (LO) is a copper amine oxidase of the extracellular matrix which initiates covalent cross-linking in collagens and elastin. Human LO was expressed in Escherichia coli. At 37 degrees C, large amounts of protein were obtained, but in the form of insoluble aggregates. Lowering the growth temperature, and reducing the amount of inducer, resulted in the production of soluble LO, which was active on a degrees [3H]lysine-labeled elastin substrate. LO was also targeted to the periplasm as a fusion protein with the pelb signal peptide. The periplasmic enzyme was soluble, active and inhibited by beta-aminopropionitrile. Production of the carbonyl co-factor is therefore not a limitation in the expression of active LO in bacteria.
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- 1996
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30. The proteolytic processing site of the precursor of lysyl oxidase
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David J.S. Hulmes, Linda A. Fothergill-Gilmore, Andrew D. Cronshaw, and Deleage, Gilbert
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Glycosylation ,Swine ,Sequence analysis ,Molecular Sequence Data ,Lysyl oxidase ,Cleavage (embryo) ,Biochemistry ,Protein-Lysine 6-Oxidase ,chemistry.chemical_compound ,Endopeptidases ,[SDV.BBM] Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Animals ,Amino Acid Sequence ,Cyanogen Bromide ,Protein Precursors ,Binding site ,Protein precursor ,Molecular Biology ,Peptide sequence ,Chromatography, High Pressure Liquid ,chemistry.chemical_classification ,Aspartic Acid ,Binding Sites ,Metalloendopeptidases ,Cell Biology ,Peptide Fragments ,Amino acid ,Molecular Weight ,chemistry ,Sequence Analysis ,Research Article - Abstract
The precise cleavage site of the N-terminal propeptide region of the precursor of lysyl oxidase has not yet been established, due to N-terminal blocking of the mature protein. Using a combination of peptide fragmentation, amino acid sequencing, time-of-flight m.s. and partial chemical unblocking procedures, it is shown that the mature form of lysyl oxidase begins at residue Asp-169 of the precursor protein (numbered according to the human sequence). The cleavage site is 28 residues to the C-terminal side of the site previously suggested on the basis of apparant molecular mass by SDS/PAGE, with the consequence that the two putative, N-linked glycosylation sites and the position of the Arg/Gln sequence polymorphism are now all in the precursor region.The precise cleavage site of the N-terminal propeptide region of the precursor of lysyl oxidase has not yet been established, due to N-terminal blocking of the mature protein. Using a combination of peptide fragmentation, amino acid sequencing, time-of-flight m.s. and partial chemical unblocking procedures, it is shown that the mature form of lysyl oxidase begins at residue Asp-169 of the precursor protein (numbered according to the human sequence). The cleavage site is 28 residues to the C-terminal side of the site previously suggested on the basis of apparant molecular mass by SDS/PAGE, with the consequence that the two putative, N-linked glycosylation sites and the position of the Arg/Gln sequence polymorphism are now all in the precursor region.
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- 1995
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31. Production and crystallization of the C-propeptide trimer from human procollagen III
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K. El Omari, David J.S. Hulmes, Yuguang Zhao, Thomas S. Walter, Catherine Moali, Natacha Mariano, Jean-Marie Bourhis, Nushin Aghajari, Frédéric Delolme, Microbiologie moléculaire et biochimie structurale / Molecular Microbiology and Structural Biochemistry (MMSB), Université Claude Bernard Lyon 1 (UCBL), and Université de Lyon-Université de Lyon-Centre National de la Recherche Scientifique (CNRS)
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[SDV]Life Sciences [q-bio] ,Molecular Sequence Data ,Biophysics ,Trimer ,macromolecular substances ,Biochemistry ,law.invention ,03 medical and health sciences ,chemistry.chemical_compound ,Structural Biology ,law ,Genetics ,Extracellular ,Humans ,Amino Acid Sequence ,Crystallization ,Peptide sequence ,ComputingMilieux_MISCELLANEOUS ,030304 developmental biology ,0303 health sciences ,integumentary system ,030302 biochemistry & molecular biology ,Condensed Matter Physics ,Peptide Fragments ,Procollagen peptidase ,Crystallography ,HEK293 Cells ,chemistry ,Crystallization Communications ,Orthorhombic crystal system ,Protein Multimerization ,Procollagen ,Derivative (chemistry) ,Intracellular - Abstract
The C-propeptide domains of the fibrillar procollagens, which are present throughout the Metazoa in the form of ∼90 kDa trimers, play crucial roles in both intracellular molecular assembly and extracellular formation of collagen fibrils. The first crystallization of a C-propeptide domain, that from human procollagen III, is described. Following transient expression in mammalian 293T cells of both the native protein and a selenomethionine derivative, two crystal forms of the homotrimer were obtained: an orthorhombic form (P2(1)2(1)2(1)) that diffracted to 1.7 Å resolution and a trigonal form (P321) that diffracted to 3.5 Å resolution. Characterization by MALDI-TOF mass spectrometry allowed the efficiency of selenomethionine incorporation to be determined.
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- 2012
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32. Hepatocellular carcinoma lesion characterization: single-institution clinical performance review of multiphase gadolinium-enhanced MR imaging--comparison to prior same-center results after MR systems improvements
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Christina Lurie, Bobby Kalb, James R. Spivey, Hiroumi D. Kitajima, David J.S. Becker-Weidman, N. Volkan Adsay, Zhengjia Chen, S.I. Hanish, Stuart J. Knechtle, Puneet Sharma, Diego R. Martin, and Alton B. Farris
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Male ,medicine.medical_specialty ,Carcinoma, Hepatocellular ,Gadolinium ,medicine.medical_treatment ,chemistry.chemical_element ,Contrast Media ,Liver transplantation ,Sensitivity and Specificity ,Lesion ,Meglumine ,Predictive Value of Tests ,Carcinoma ,Organometallic Compounds ,Medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Single institution ,neoplasms ,Retrospective Studies ,business.industry ,Liver Neoplasms ,Clinical performance ,Middle Aged ,medicine.disease ,Mr imaging ,Magnetic Resonance Imaging ,digestive system diseases ,Liver Transplantation ,chemistry ,Hepatocellular carcinoma ,Female ,Radiology ,medicine.symptom ,business - Abstract
To measure diagnostic performance in the detection of hepatocellular carcinoma (HCC) by using the most recent technology and multiphase gadolinium-enhanced magnetic resonance (MR) imaging and to compare with earlier results at the same institution.This retrospective study was institutional review board approved and HIPAA compliant. Informed consent was obtained. Between January 2008 and April 2010, 101 patients underwent liver transplantation and pretransplantation abdominal MR imaging within 90 days. Prospective image interpretations from the clinical record were reviewed for documentation of HCC, including size, number, and location. Liver explant histologic examination provided the reference standard for lesion analysis and was performed in axial gross slices in conjunction with the MR imaging report for direct comparison. Tumors were categorized according to size (≥ 2 cm or2 cm), and MR imaging detection sensitivity, specificity, predictive values, and accuracy were calculated according to category. The Fisher exact test was used to compare results from this study against prior reported results.Thirty-five (34.7%) of 101 patients had HCC at explant analysis. Patient-based analysis of all lesions showed a sensitivity and specificity of 97.1% (34 of 35) and 100% (66 of 66), respectively. For lesions 2 cm or larger, MR imaging had a sensitivity and specificity of 100% (23 of 23) and 100% (78 of 78), respectively. For lesions smaller than 2 cm, MR imaging had a sensitivity and specificity of 82.6% (19 of 23) and 100% (78 of 78), respectively. Lesion-based sensitivity for all tumors was 91.4% (53 of 58) in the current study, compared with 77.8% in 2007 (P = .07). For lesions smaller than 2 cm, the sensitivity was 87.5% (28 of 32) in the current study, compared with 55.6% previously (P = .02).MR imaging remains a highly accurate diagnostic method for the preoperative evaluation of HCC, and detection of small (2 cm) tumors has been significantly improved compared with that of earlier studies.
- Published
- 2011
33. Quantitative Studies of Human Lung Airspace Wall in Relation to Collagen and Elastin Content
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David J.S. Hulmes, David Lams, Andrew Miller, Malcolm R. Lang, Gerald W. Fiaux, and Deleage, Gilbert
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Pathology ,medicine.medical_specialty ,Materials science ,Human lung ,Hydroxyproline ,chemistry.chemical_compound ,Rheumatology ,Reference Values ,Fibrosis ,[SDV.BBM] Life Sciences [q-bio]/Biochemistry, Molecular Biology ,medicine ,Humans ,Isodesmosine ,Lung ,Aged ,Aged, 80 and over ,Alveolar Wall ,Analysis of Variance ,biology ,Smoking ,Middle Aged ,respiratory system ,medicine.disease ,Elastin ,respiratory tract diseases ,Pulmonary Alveoli ,medicine.anatomical_structure ,chemistry ,Normal lung ,biology.protein ,Autopsy ,Collagen - Abstract
Biochemical determinations of the collagen and elastin content in 50 mm3 samples of human lung are presented in relation to morphometric measurements of lung structure, as the amount of alveolar wall surface area per unit volume (AWUV), on adjacent slices. There were no differences in AWUV values, collagen content (determined as hydroxyproline) or elastin content (determined as isodesmosine) between upper and lower lobes within a single lung. In a study of 102 samples from 9 smokers lungs with no evidence of macro- or microscopic emphysema (as estimated by AWUV measurement), there was a negative correlation between AWUV and the amounts of collagen or elastin per unit volume of inflated lung. The correlation was stronger when collagen and elastin content were expressed per unit area of alveolar wall. The negative correlation is interpreted as representing either the anatomical variation within the complex hierarchy of normal lung structure or possibly low levels of fibrosis in response to cigarette smoking.Biochemical determinations of the collagen and elastin content in 50 mm3 samples of human lung are presented in relation to morphometric measurements of lung structure, as the amount of alveolar wall surface area per unit volume (AWUV), on adjacent slices. There were no differences in AWUV values, collagen content (determined as hydroxyproline) or elastin content (determined as isodesmosine) between upper and lower lobes within a single lung. In a study of 102 samples from 9 smokers lungs with no evidence of macro- or microscopic emphysema (as estimated by AWUV measurement), there was a negative correlation between AWUV and the amounts of collagen or elastin per unit volume of inflated lung. The correlation was stronger when collagen and elastin content were expressed per unit area of alveolar wall. The negative correlation is interpreted as representing either the anatomical variation within the complex hierarchy of normal lung structure or possibly low levels of fibrosis in response to cigarette smoking.
- Published
- 1993
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34. Tyrosine-rich acidic matrix protein (TRAMP) accelerates collagen fibril formation in vitro
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David J.S. Hulmes, Jonathan R.E. Macbeath, David R. Shackleton, and Deleage, Gilbert
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Gel electrophoresis ,Dermatopontin ,Lysyl oxidase ,Cell Biology ,Matrix (biology) ,urologic and male genital diseases ,Fibril ,Biochemistry ,Dermatan sulfate ,Extracellular matrix ,chemistry.chemical_compound ,chemistry ,[SDV.BBM] Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Molecular Biology ,Tramp - Abstract
Tyrosine-rich acidic matrix protein (TRAMP) is a recently discovered protein that co-purifies with porcine skin lysyl oxidase and is equivalent to the M(r) 22,000 extracellular matrix protein from bovine skin that co-purifies with dermatan sulfate proteoglycans (Cronshaw, A. D., MacBeath, J. R. E., Shackleton, D. R., Collins, J. F., Fothergill-Gilmore, L. A., and Hulmes, D. J. S. (1993) Matrix 13, 255-266; Neame, P. J., Choi, H. U., and Rosenberg, L. C. (1989) J. Biol. Chem. 264, 5474-5479). The effect of TRAMP on collagen fibril formation was studied in vitro by reconstitution of fibrils from lathyritic rat skin collagen I. Fibril formation was initiated by the warm start procedure, in which acidic collagen solutions and double strength neutral buffer, both preincubated separately at 34 degrees C, were mixed. When monitored by turbidimetry, TRAMP was found to accelerate collagen fibril formation. Acceleration occurred at sub-stoichiometric molar ratios of TRAMP collagen, and the presence of TRAMP stabilized the fibrils against low temperature dissociation. It was confirmed by centrifugation that the amount of fibrillar collagen formed in the presence of TRAMP was greater than in its absence. By SDS-polyacrylamide gel electrophoresis and scanning densitometry, binding of TRAMP to collagen was detected that approached saturation with a molar ratio of TRAMP to collagen of approximately 1:2. Fibrils formed in the presence of TRAMP were normal when observed by electron microscopy, although fibril diameters were smaller than the controls. TRAMP was found to partially reverse the inhibitory effects of urea and increased ionic strength on the kinetics of fibril formation, although inhibition by glucose was unaffected. TRAMP also accelerated the assembly of pepsin-treated collagen, where the non-helical, telopeptide regions were partially removed. Acceleration of collagen fibril formation by TRAMP is discussed in the light of the known effects of other extracellular matrix components on this process.Tyrosine-rich acidic matrix protein (TRAMP) is a recently discovered protein that co-purifies with porcine skin lysyl oxidase and is equivalent to the M(r) 22,000 extracellular matrix protein from bovine skin that co-purifies with dermatan sulfate proteoglycans (Cronshaw, A. D., MacBeath, J. R. E., Shackleton, D. R., Collins, J. F., Fothergill-Gilmore, L. A., and Hulmes, D. J. S. (1993) Matrix 13, 255-266; Neame, P. J., Choi, H. U., and Rosenberg, L. C. (1989) J. Biol. Chem. 264, 5474-5479). The effect of TRAMP on collagen fibril formation was studied in vitro by reconstitution of fibrils from lathyritic rat skin collagen I. Fibril formation was initiated by the warm start procedure, in which acidic collagen solutions and double strength neutral buffer, both preincubated separately at 34 degrees C, were mixed. When monitored by turbidimetry, TRAMP was found to accelerate collagen fibril formation. Acceleration occurred at sub-stoichiometric molar ratios of TRAMP collagen, and the presence of TRAMP stabilized the fibrils against low temperature dissociation. It was confirmed by centrifugation that the amount of fibrillar collagen formed in the presence of TRAMP was greater than in its absence. By SDS-polyacrylamide gel electrophoresis and scanning densitometry, binding of TRAMP to collagen was detected that approached saturation with a molar ratio of TRAMP to collagen of approximately 1:2. Fibrils formed in the presence of TRAMP were normal when observed by electron microscopy, although fibril diameters were smaller than the controls. TRAMP was found to partially reverse the inhibitory effects of urea and increased ionic strength on the kinetics of fibril formation, although inhibition by glucose was unaffected. TRAMP also accelerated the assembly of pepsin-treated collagen, where the non-helical, telopeptide regions were partially removed. Acceleration of collagen fibril formation by TRAMP is discussed in the light of the known effects of other extracellular matrix components on this process.
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- 1993
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35. Processing of procollagen III by meprins: new players in extracellular matrix assembly?
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Daniel Kronenberg, Walter Stöcker, Erwin E. Sterchi, Catherine Moali, Heiko Traupe, Markus Böhm, Sandrine Vadon-Le Goff, Bernd Cem Bruns, David J.S. Hulmes, and Christoph Becker-Pauly
- Subjects
Keratinocytes ,macromolecular substances ,Dermatology ,Matrix metalloproteinase ,Cleavage (embryo) ,Biochemistry ,Bone Morphogenetic Protein 1 ,Substrate Specificity ,Extracellular matrix ,03 medical and health sciences ,Dermis ,medicine ,Humans ,Enhancer ,Molecular Biology ,Cells, Cultured ,030304 developmental biology ,0303 health sciences ,Extracellular Matrix Proteins ,integumentary system ,Chemistry ,Extracellular matrix assembly ,030302 biochemistry & molecular biology ,Metalloendopeptidases ,Cell Biology ,Fibroblasts ,Fibrosis ,Procollagen peptidase ,medicine.anatomical_structure ,Collagen Type III ,HEK293 Cells ,Keloid ,Astacin - Abstract
Meprins α and β, a subgroup of zinc metalloproteinases belonging to the astacin family, are known to cleave components of the extracellular matrix, either during physiological remodeling or in pathological situations. In this study we present a new role for meprins in matrix assembly, namely the proteolytic processing of procollagens. Both meprins α and β release the N- and C-propeptides from procollagen III, with such processing events being critical steps in collagen fibril formation. In addition, both meprins cleave procollagen III at exactly the same site as the procollagen C-proteinases, including bone morphogenetic protein-1 (BMP-1) and other members of the tolloid proteinase family. Indeed, cleavage of procollagen III by meprins is more efficient than by BMP-1. In addition, unlike BMP-1, whose activity is stimulated by procollagen C-proteinase enhancer proteins (PCPEs), the activity of meprins on procollagen III is diminished by PCPE-1. Finally, following our earlier observations of meprin expression by human epidermal keratinocytes, meprin α is also shown to be expressed by human dermal fibroblasts. In the dermis of fibrotic skin (keloids), expression of meprin α increases and meprin β begins to be detected. Our study suggests that meprins could be important players in several remodeling processes involving collagen fiber deposition.
- Published
- 2010
36. Collagen Diversity, Synthesis and Assembly
- Author
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David J.S. Hulmes
- Subjects
In vivo ,Chemistry ,Extracellular ,Lysyl oxidase ,SUPERFAMILY ,macromolecular substances ,Intracellular ,In vitro ,Triple helix ,Cell biology ,Supramolecular assembly - Abstract
The vertebrate collagen superfamily now includes over 50 collagens and collagen-like proteins. Here, their different structures are described, as well as their diverse forms of supramolecular assembly. Also presented here are the various steps in collagen biosynthesis, both intracellular and extracellular, and the functions of the collagen-specific post-translational modifications. Assembly of collagen fibrils, both in vitro and in vivo, is reviewed, including the mechanisms that control this process and the interactions involved. Finally, recent developments in the supramolecular assembly of collagen-like peptides are discussed.
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- 2008
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37. Procollagen type I C-proteinase enhancer is a naturally occurring connective tissue glycoprotein
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Efrat Kessler, David J.S. Hulmes, A. Paul Mould, and Deleage, Gilbert
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Immunoblotting ,Biophysics ,Connective tissue ,Biology ,Biochemistry ,Antibodies ,Bone morphogenetic protein 1 ,Bone Morphogenetic Protein 1 ,Tendons ,Mice ,In vivo ,Endopeptidases ,[SDV.BBM] Life Sciences [q-bio]/Biochemistry, Molecular Biology ,medicine ,Animals ,Trypsin ,Enhancer ,Molecular Biology ,Cells, Cultured ,Glycoproteins ,chemistry.chemical_classification ,Metalloendopeptidases ,Skeletal muscle ,Procollagen N-Endopeptidase ,Cell Biology ,Fibroblasts ,musculoskeletal system ,Molecular biology ,Rats ,Enzyme Activation ,Molecular Weight ,Procollagen peptidase ,medicine.anatomical_structure ,chemistry ,Connective Tissue ,Organ Specificity ,Bone Morphogenetic Proteins ,Electrophoresis, Polyacrylamide Gel ,Glycoprotein - Abstract
Using antibodies to the procollagen C-proteinase enhancer of mouse fibroblast culture medium, we have screened by immunoblotting extracts of several post natal mouse and rat tissues for the presence of the enhancer antigen. All rodent connective tissues were relatively rich in enhancer; lower amounts were found in skeletal muscle and heart and essentially no enhancer was detected in kidney, liver or brain. The amounts of enhancer in mouse tendon and calvaria extracts were age related, with highest amounts in 11 and 19 d tendons and in 1 d calvaria-the times of rapid growth of these organs. The results suggest that procollagen C-proteinase enhancer is a specific connective tissue glycoprotein that is likely to regulate procollagen processing in vivo.Using antibodies to the procollagen C-proteinase enhancer of mouse fibroblast culture medium, we have screened by immunoblotting extracts of several post natal mouse and rat tissues for the presence of the enhancer antigen. All rodent connective tissues were relatively rich in enhancer; lower amounts were found in skeletal muscle and heart and essentially no enhancer was detected in kidney, liver or brain. The amounts of enhancer in mouse tendon and calvaria extracts were age related, with highest amounts in 11 and 19 d tendons and in 1 d calvaria-the times of rapid growth of these organs. The results suggest that procollagen C-proteinase enhancer is a specific connective tissue glycoprotein that is likely to regulate procollagen processing in vivo.
- Published
- 1990
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38. An ultrafiltration assay for lysyl oxidase
- Author
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David J.S. Hulmes, David R. Shackleton, and Deleage, Gilbert
- Subjects
Swine ,Lysine ,Biophysics ,Ultrafiltration ,Lysyl oxidase ,Chick Embryo ,Tritium ,Biochemistry ,Protein-Lysine 6-Oxidase ,chemistry.chemical_compound ,[SDV.BBM] Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Animals ,Urea ,Molecular Biology ,chemistry.chemical_classification ,Chromatography ,Dose-Response Relationship, Drug ,biology ,Substrate (chemistry) ,Cell Biology ,Enzyme assay ,Elastin ,Ultrafiltration (renal) ,Enzyme ,chemistry ,Enzyme inhibitor ,Aminopropionitrile ,biology.protein ,Amino Acid Oxidoreductases ,Chickens - Abstract
A modification of the original microdistillation assay for lysyl oxidase is described in which Amicon C-10 microconcentrators are used to separate, by ultrafiltration, the 3H-labeled products released from a [4,5-3H]-lysine-labeled elastin substrate. Enzyme activity is determined by scintillation counting of the ultrafiltrate, after subtraction of radioactivity released in the presence of beta-aminopropionitrile, a specific inhibitor of the enzyme. Conditions are described which optimize both the sensitivity and the efficient use of substrate. The assay shows linear inhibition of activity in up to 1 M urea; hence, as the enzyme is normally diluted in the assay, samples in 6 M urea can be assayed directly, without prior dialysis, and corrected for partial inhibition. Comparable results are obtained when enzyme activity is assayed by ultrafiltration or microdistillation. The assay is simple and convenient and, by using disposable containers throughout, it eliminates the need for time-consuming decontamination of radioactive glassware.A modification of the original microdistillation assay for lysyl oxidase is described in which Amicon C-10 microconcentrators are used to separate, by ultrafiltration, the 3H-labeled products released from a [4,5-3H]-lysine-labeled elastin substrate. Enzyme activity is determined by scintillation counting of the ultrafiltrate, after subtraction of radioactivity released in the presence of beta-aminopropionitrile, a specific inhibitor of the enzyme. Conditions are described which optimize both the sensitivity and the efficient use of substrate. The assay shows linear inhibition of activity in up to 1 M urea; hence, as the enzyme is normally diluted in the assay, samples in 6 M urea can be assayed directly, without prior dialysis, and corrected for partial inhibition. Comparable results are obtained when enzyme activity is assayed by ultrafiltration or microdistillation. The assay is simple and convenient and, by using disposable containers throughout, it eliminates the need for time-consuming decontamination of radioactive glassware.
- Published
- 1990
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39. A Kinetic Analysis of Type I Procollagen Processing in Developing Chick Embryo Cornea
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Sally J. Mellor, David J.S. Hulmes, and Gordon L. Atkins
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medicine.anatomical_structure ,History and Philosophy of Science ,Chemistry ,Type I Procollagen ,General Neuroscience ,Cornea ,Kinetic analysis ,medicine ,Embryo ,Anatomy ,General Biochemistry, Genetics and Molecular Biology ,Cell biology - Published
- 1990
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40. Assembly of Type I Collagen Fibrils de Novo by the Specific Enzymic Cleavage of pC Collagen
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Darwin J. Prockop, David J.S. Hulmes, Karl E. Kadler, and Y Hojima
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Macromolecular Substances ,Chemistry ,General Neuroscience ,Fibrillogenesis ,Fibroblasts ,Fibril ,Cleavage (embryo) ,General Biochemistry, Genetics and Molecular Biology ,Kinetics ,Microscopy, Electron ,Collagen, type I, alpha 1 ,History and Philosophy of Science ,Biochemistry ,Connective Tissue ,Connective tissue metabolism ,Collagen metabolism ,Humans ,Collagen ,Cells, Cultured ,Procollagen ,Type I collagen ,Skin - Published
- 1990
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41. Procollagen C-proteinase enhancer-1 (PCPE-1) interacts with beta2-microglobulin (beta2-m) and may help initiate beta2-m amyloid fibril formation in connective tissues
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Kazushi Nakao, Kousuke Fukuoka, David J.S. Hulmes, Akihiro Yasuhara, Shigeru Akagi, Joni D. Mott, Jun Wada, Hironobu Naiki, Haruo Ichikawa, Yuji Takatori, Bernard Font, Atsuko Nakatsuka, Hirofumi Makino, Hisanori Morimoto, and Tadakazu Ookoshi
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Amyloid ,Immunoprecipitation ,Molecular Sequence Data ,Bone Morphogenetic Protein 1 ,chemistry.chemical_compound ,Two-Hybrid System Techniques ,Humans ,Amino Acid Sequence ,Molecular Biology ,Gene Library ,Glycoproteins ,Extracellular Matrix Proteins ,Dose-Response Relationship, Drug ,Chemistry ,Beta-2 microglobulin ,cDNA library ,Metalloendopeptidases ,Molecular biology ,In vitro ,Recombinant Proteins ,Protein Structure, Tertiary ,Procollagen peptidase ,Enhancer Elements, Genetic ,Biochemistry ,Bone Morphogenetic Proteins ,Thioflavin ,beta 2-Microglobulin ,Type I collagen ,Protein Binding - Abstract
Dialysis related amyloidosis (DRA) is a progressive and serious complication in patients under long-term hemodialysis and mainly leads to osteo-articular diseases. Although beta(2)-microglobulin (beta2-m) is the major structural component of beta2-m amyloid fibrils, the initiation of amyloid formation is not clearly understood. Here, we have identified procollagen C-proteinase enhancer-1 (PCPE-1) as a new interacting protein with beta2-m by screening a human synovium cDNA library. The interaction of beta2-m with full-length PCPE-1 was confirmed by immunoprecipitation, solid-phase binding and pull-down assays. By yeast two-hybrid analysis and pull-down assay, beta2-m appeared to interact with PCPE-1 via the NTR (netrin-like) domain and not via the CUB (C1r/C1s, Uegf and BMP-1) domain region. In synovial tissues derived from hemodialysis patients with DRA, beta2-m co-localized and formed a complex with PCPE-1. beta2-m did not alter the basal activity of bone morphogenetic protein-1/procollagen C-proteinase (BMP-1/PCP) nor BMP-1/PCP activity enhanced by PCPE-1. PCPE-1 did not stimulate beta2-m amyloid fibril formation from monomeric beta2-m in vitro under acidic and neutral conditions as revealed by thioflavin T fluorescence spectroscopy and electron microscopy. Since PCPE-1 is abundantly expressed in connective tissues rich in type I collagen, it may be involved in the initial accumulation of beta2-m in selected tissues such as tendon, synovium and bone. Furthermore, since such preferential deposition of beta2-m may be linked to subsequent beta2-m amyloid fibril formation, the disruption of the interaction between beta2-m and PCPE-1 may prevent beta2-m amyloid fibril formation and therefore PCPE-1 could be a new target for the treatment of DRA.
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- 2007
42. Development of a hemicornea from human primary cell cultures for pharmacotoxicology testing
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V. Andre, Vanessa Barbaro, Virginie Justin, Odile Damour, E. Di Iorio, C. Auxenfans, N. Bechetoille, David J.S. Hulmes, Nicolas Builles, Institut de biologie et chimie des protéines [Lyon] (IBCP), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Centre National de la Recherche Scientifique (CNRS), and Deleage, Gilbert
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Collagen Type IV ,Stromal cell ,Pharmacotoxicology ,Epithelial cell morphogenesis ,Health, Toxicology and Mutagenesis ,Mesenchyme ,Cell Culture Techniques ,Animal Testing Alternatives ,Toxicology ,Cornea ,Extracellular matrix ,03 medical and health sciences ,0302 clinical medicine ,Laminin ,[SDV.BBM] Life Sciences [q-bio]/Biochemistry, Molecular Biology ,medicine ,Humans ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Cells, Cultured ,030304 developmental biology ,Basement membrane ,0303 health sciences ,biology ,Chemistry ,Stem Cells ,Hemidesmosome ,Epithelium, Corneal ,Membrane Proteins ,Epithelial Cells ,Cell Biology ,Hemidesmosomes ,Extracellular Matrix ,Cell biology ,medicine.anatomical_structure ,030221 ophthalmology & optometry ,biology.protein ,Stromal Cells ,Cell Adhesion Molecules ,Biomarkers - Abstract
International audience; We report the reconstruction and characterization of a hemicornea (epithelialized stroma), using primary human cells, for use in research and as an alternative to the use of animals in pharmacotoxicology testing. To create a stromal equivalent, keratocytes from human corneas were cultured in collagen-glycosaminoglycan-chitosan foams. Limbal stem cell-derived epithelial cells were seeded on top of these, giving rise to hemi-corneas. The epithelium appeared morphologically similar to its physiological counterpart, as shown by the basal cell expression of p63 isoforms including, in some cases, the stem cell marker p63DeltaNalpha, and the expression of keratin 3 and 14-3-3sigma in the upper cell layers. In addition, the cuboidal basal epithelial cells were anchored to a basement membrane containing collagen IV, laminin 5, and hemidesmosomes. In the stromal part, the keratocytes colonized the porous scaffold, formed a network of interconnecting cells, and synthesized an ultrastructurally organized extracellular matrix (ECM) containing collagen types I, V, and VI. Electron microscopy showed the newly synthesized collagen fibrils to have characteristic periodic striations, with diameters and interfibril spacings similar to those found in natural corneas. Compared to existing models for corneal pharmacotoxicology testing, this new model more closely approaches physiological conditions by including the inducing effects of mesenchyme and cell-matrix interactions on epithelial cell morphogenesis.We report the reconstruction and characterization of a hemicornea (epithelialized stroma), using primary human cells, for use in research and as an alternative to the use of animals in pharmacotoxicology testing. To create a stromal equivalent, keratocytes from human corneas were cultured in collagen-glycosaminoglycan-chitosan foams. Limbal stem cell-derived epithelial cells were seeded on top of these, giving rise to hemi-corneas. The epithelium appeared morphologically similar to its physiological counterpart, as shown by the basal cell expression of p63 isoforms including, in some cases, the stem cell marker p63DeltaNalpha, and the expression of keratin 3 and 14-3-3sigma in the upper cell layers. In addition, the cuboidal basal epithelial cells were anchored to a basement membrane containing collagen IV, laminin 5, and hemidesmosomes. In the stromal part, the keratocytes colonized the porous scaffold, formed a network of interconnecting cells, and synthesized an ultrastructurally organized extracellular matrix (ECM) containing collagen types I, V, and VI. Electron microscopy showed the newly synthesized collagen fibrils to have characteristic periodic striations, with diameters and interfibril spacings similar to those found in natural corneas. Compared to existing models for corneal pharmacotoxicology testing, this new model more closely approaches physiological conditions by including the inducing effects of mesenchyme and cell-matrix interactions on epithelial cell morphogenesis.
- Published
- 2007
43. Low resolution structure determination shows procollagen C-proteinase enhancer to be an elongated multidomain glycoprotein
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Christine Ebel, Denise Eichenberger, Gilbert Deléage, Sylvie Ricard-Blum, Maxim V. Petoukhov, Christophe Geourjon, Dmitri I. Svergun, Barry M. Steiglitz, Simonetta Bernocco, Florence Ruggiero, David J.S. Hulmes, Daniel S. Greenspan, Bernard Font, Institut de biologie et chimie des protéines [Lyon] (IBCP), Université Claude Bernard Lyon 1 (UCBL), Université de Lyon-Université de Lyon-Centre National de la Recherche Scientifique (CNRS), Institut de biologie structurale (IBS - UMR 5075 ), Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Institut de Recherche Interdisciplinaire de Grenoble (IRIG), Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Centre National de la Recherche Scientifique (CNRS), Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Institut de Recherche Interdisciplinaire de Grenoble (IRIG), and Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)
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MESH: Extracellular Matrix Proteins ,Models, Molecular ,MESH: Sequence Homology, Amino Acid ,Protein Conformation ,MESH: Amino Acid Sequence ,Matrix metalloproteinase ,Biochemistry ,Mass Spectrometry ,law.invention ,MESH: Recombinant Proteins ,MESH: Protein Structure, Tertiary ,MESH: Protein Conformation ,law ,Scattering, Radiation ,chemistry.chemical_classification ,0303 health sciences ,Extracellular Matrix Proteins ,Chemistry ,030302 biochemistry & molecular biology ,Recombinant Proteins ,Recombinant DNA ,medicine.symptom ,MESH: Models, Molecular ,Stereochemistry ,Molecular Sequence Data ,MESH: Glycoproteins ,MESH: Microscopy, Electron ,Cell Line ,03 medical and health sciences ,MESH: X-Rays ,medicine ,Humans ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Homology modeling ,Amino Acid Sequence ,MESH: Scattering, Radiation ,Enhancer ,Molecular Biology ,030304 developmental biology ,Glycoproteins ,MESH: Mass Spectrometry ,MESH: Humans ,MESH: Molecular Sequence Data ,Sequence Homology, Amino Acid ,X-Rays ,MESH: Ultracentrifugation ,Cell Biology ,MESH: Cell Line ,Protein Structure, Tertiary ,Procollagen peptidase ,Microscopy, Electron ,Mechanism of action ,Biophysics ,Glycoprotein ,Ultracentrifugation ,Function (biology) - Abstract
International audience; Procollagen C-proteinase enhancer (PCPE) is an extracellular matrix glycoprotein that can stimulate the action of tolloid metalloproteinases, such as bone morphogenetic protein-1, on a procollagen substrate, by up to 20-fold. The PCPE molecule consists of two CUB domains followed by a C-terminal NTR (netrin-like) domain. In order to obtain structural insights into the function of PCPE, the recombinant protein was characterized by a range of biophysical techniques, including analytical ultracentrifugation, transmission electron microscopy, and small angle x-ray scattering. All three approaches showed PCPE to be a rod-like molecule, with a length of approximately 150 A. Homology modeling of both CUB domains and the NTR domain was consistent with the low-resolution structure of PCPE deduced from the small angle x-ray scattering data. Comparison with the low-resolution structure of the procollagen C-terminal region supports a recently proposed model (Ricard-Blum, S., Bernocco, S., Font, B., Moali, C., Eichenberger, D., Farjanel, J., Burchardt, E. R., van der Rest, M., Kessler, E., and Hulmes, D. J. S. (2002) J. Biol. Chem. 277, 33864-33869) for the mechanism of action of PCPE.
- Published
- 2002
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44. Interaction properties of the procollagen C-proteinase enhancer protein shed light on the mechanism of stimulation of BMP-1
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Catherine Moali, Elmar R. Burchardt, Efrat Kessler, David J.S. Hulmes, Michel van der Rest, Sylvie Ricard-Blum, Simonetta Bernocco, Bernard Font, Denise Eichenberger, Jean Farjanel, and Deleage, Gilbert
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chemistry.chemical_classification ,Extracellular Matrix Proteins ,Binding Sites ,integumentary system ,Metalloendopeptidases ,Cell Biology ,Cleavage (embryo) ,Biochemistry ,Bone morphogenetic protein 1 ,Bone Morphogenetic Protein 1 ,Dissociation constant ,Procollagen peptidase ,chemistry ,Bone Morphogenetic Proteins ,[SDV.BBM] Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Humans ,Calcium ,Binding site ,Glycoprotein ,Protein precursor ,Enhancer ,Molecular Biology ,Procollagen ,Glycoproteins - Abstract
Procollagen C-proteinase enhancer (PCPE) is an extracellular matrix glycoprotein that binds to the C-propeptide of procollagen I and can enhance the activities of procollagen C-proteinases up to 20-fold. To determine the molecular mechanism of PCPE activity, the interactions of the recombinant protein with the procollagen molecule as well as with its isolated C-propeptide domain were studied using surface plasmon resonance (BIAcore) technology. Binding required the presence of divalent metal cations such as calcium and manganese. By ligand blotting, calcium was found to bind to the C-propeptide domains of procollagens I and III but not to PCPE. By chemical cross-linking, the stoichiometry of the PCPE/C-propeptide interaction was found to be 1:1 in accordance with enzyme kinetic data. The use of a monoclonal antibody directed against the N-terminal region of the C-propeptide suggested that this region is probably not involved in binding to PCPE. Association and dissociation kinetics of the C-propeptide domains of procollagens I and III on immobilized PCPE were rapid. Extrapolation to saturation equilibrium yielded apparent equilibrium dissociation constants in the range 150-400 nM. In contrast, the association/dissociation kinetics of intact procollagen molecules on immobilized PCPE were relatively slow, corresponding to a dissociation constant of 1 nM. Finally, pN-collagen (i.e. procollagen devoid of the C-terminal propeptide domain) was also found to bind to immobilized PCPE, suggesting that PCPE binds to sites on either side of the procollagen cleavage site, thereby facilitating the action of procollagen C-proteinases.Procollagen C-proteinase enhancer (PCPE) is an extracellular matrix glycoprotein that binds to the C-propeptide of procollagen I and can enhance the activities of procollagen C-proteinases up to 20-fold. To determine the molecular mechanism of PCPE activity, the interactions of the recombinant protein with the procollagen molecule as well as with its isolated C-propeptide domain were studied using surface plasmon resonance (BIAcore) technology. Binding required the presence of divalent metal cations such as calcium and manganese. By ligand blotting, calcium was found to bind to the C-propeptide domains of procollagens I and III but not to PCPE. By chemical cross-linking, the stoichiometry of the PCPE/C-propeptide interaction was found to be 1:1 in accordance with enzyme kinetic data. The use of a monoclonal antibody directed against the N-terminal region of the C-propeptide suggested that this region is probably not involved in binding to PCPE. Association and dissociation kinetics of the C-propeptide domains of procollagens I and III on immobilized PCPE were rapid. Extrapolation to saturation equilibrium yielded apparent equilibrium dissociation constants in the range 150-400 nM. In contrast, the association/dissociation kinetics of intact procollagen molecules on immobilized PCPE were relatively slow, corresponding to a dissociation constant of 1 nM. Finally, pN-collagen (i.e. procollagen devoid of the C-terminal propeptide domain) was also found to bind to immobilized PCPE, suggesting that PCPE binds to sites on either side of the procollagen cleavage site, thereby facilitating the action of procollagen C-proteinases.
- Published
- 2002
45. Fibrillar Collagen Trimerization: Structural Basis and Related Genetic Disorders
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David J.S. Hulmes, Natacha Mariano, Urvashi Sharma, and Nushin Aghajari
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Inorganic Chemistry ,Structural Biology ,Chemistry ,Fibrillar collagen ,Biophysics ,General Materials Science ,Physical and Theoretical Chemistry ,Condensed Matter Physics ,Biochemistry - Abstract
The C-propeptides of fibrillar procollagens play crucial roles in tissue homeostasis and remodeling by controlling both the intracellular assembly of procollagen molecules and the extracellular assembly of collagen fibrils. Mutations in the C-propeptides affecting molecular assembly are associated with several, often lethal, genetic disorders affecting bone, cartilage, blood vessels and skin. Cells often produce multiple collagen types, each with the correct chain composition. In fibrillar collagens, molecular assembly begins with the C-propeptides which contain chain recognition sequences specific for each collagen type. Our recent crystal structure of a C-propeptide trimer from procollagen III (Bourhis et al, 2012), revealed specific interactions at the trimer interface. Unlike collagen III, a homotrimer, collagen I is normally a heterotrimer, though small amounts of homotrimer are found in embryonic tissue and cancer. To investigate the molecular basis of homo- versus hetero-trimer formation, further structural information is required. We have initiated structural studies on homo- and hetero-trimers of the C-propeptide domain of human procollagen I, to study the molecular basis of chain selectivity within the same cells. CPI homotrimer crystallizes in the monoclinic spacegroup P21, and data were collected to 2.2 Å resolution. The crystal structure solved by MR shows a structure resembling CPIII with the overall shape of a flower. At the trimerization interface however, interactions between chains are specific to CPI and these give insights into the mechanism of molecular recognition. These interactions will be compared to those in CPIII. Structural mapping indicates striking correlations between the sites of numerous disease-related mutations in different C-propeptide domains and the degree of phenotype severity. The results have broad implications for the understanding of genetic disorders of connective tissues and also for new therapeutic approaches against fibrosis.
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- 2014
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46. Biophysical characterization of the C-propeptide trimer from human procollagen III reveals a tri-lobed structure
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Jean Farjanel, Christine Ebel, Denise Eichenberger, Marlène Mazzorana, Simonetta Bernocco, Stéphanie Finet, David J.S. Hulmes, and Deleage, Gilbert
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Models, Molecular ,Stereochemistry ,Trimer ,Biochemistry ,Culture Media, Serum-Free ,Cell Line ,Extracellular matrix ,Cell surface receptor ,[SDV.BBM] Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Extracellular ,Humans ,Scattering, Radiation ,Protein Structure, Quaternary ,Molecular Biology ,Chemistry ,Chemotaxis ,Cell Biology ,Recombinant Proteins ,Solutions ,Procollagen peptidase ,Collagen Type III ,Cruciform ,Biophysics ,Ultracentrifugation ,Intracellular ,Procollagen - Abstract
Procollagen C-propeptide domains direct chain association during intracellular assembly of procollagen molecules. In addition, they control collagen solubility during extracellular proteolytic processing and fibril formation and interact with cell surface receptors and extracellular matrix components involved in feedback inhibition, mineralization, cell growth arrest, and chemotaxis. At present, three-dimensional structural information for the C-propeptides, which would help to understand the underlying molecular mechanisms, is lacking. Here we have carried out a biophysical study of the recombinant C-propeptide trimer from human procollagen III using laser light scattering, analytical ultracentrifugation, and small angle x-ray scattering. The results show that the trimer is an elongated molecule, which by modeling of the x-ray scattering data appears to be cruciform in shape with three large lobes and one minor lobe. We speculate that each of the major lobes corresponds to one of the three component polypeptide chains, which come together in a junction region to connect to the rest of the procollagen molecule.Procollagen C-propeptide domains direct chain association during intracellular assembly of procollagen molecules. In addition, they control collagen solubility during extracellular proteolytic processing and fibril formation and interact with cell surface receptors and extracellular matrix components involved in feedback inhibition, mineralization, cell growth arrest, and chemotaxis. At present, three-dimensional structural information for the C-propeptides, which would help to understand the underlying molecular mechanisms, is lacking. Here we have carried out a biophysical study of the recombinant C-propeptide trimer from human procollagen III using laser light scattering, analytical ultracentrifugation, and small angle x-ray scattering. The results show that the trimer is an elongated molecule, which by modeling of the x-ray scattering data appears to be cruciform in shape with three large lobes and one minor lobe. We speculate that each of the major lobes corresponds to one of the three component polypeptide chains, which come together in a junction region to connect to the rest of the procollagen molecule.
- Published
- 2001
47. Unhydroxylated triple helical collagen I produced in transgenic plants provides new clues on the role of hydroxyproline in collagen folding and fibril formation
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Manfred Theisen, Christine Merle, David J.S. Hulmes, Robert Garrone, Simonetta Bernocco, Patricia Berland, Florence Ruggiero, and Stephanie Perret
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chemistry.chemical_classification ,Protein Folding ,Protein Conformation ,Collagen helix ,Cell Biology ,Fibril ,Plants, Genetically Modified ,Biochemistry ,Collagen Type I ,Amino acid ,Hydroxylation ,Hydroxyproline ,chemistry.chemical_compound ,Protein structure ,chemistry ,Ionic strength ,Animals ,Protein folding ,Cattle ,Electrophoresis, Polyacrylamide Gel ,Molecular Biology - Abstract
Human unhydroxylated homotrimeric triple-helical collagen I produced in transgenic plants was used as an experimental model to provide insights into the role of hydroxyproline in molecular folding and fibril formation. By using chemically cross-linked molecules, we show here that the absence of hydroxyproline residues does not prevent correct folding of the recombinant collagen although it markedly slows down the propagation rate compared with bovine fully hydroxylated homotrimeric collagen I. Relatively slow cis-trans-isomerization in the absence of hydroxyproline likely represents the rate-limiting factor in the propagation of the unhydroxylated collagen helix. Because of the lack of hydroxylation, recombinant collagen molecules showed increased flexibility as well as a reduced melting temperature compared with native homotrimers and heterotrimers, whereas the distribution of charged amino acids was unchanged. However, unlike with bovine collagen I, the recombinant collagen did not self-assemble into banded fibrils in physiological ionic strength buffer at 20 degrees C. Striated fibrils were only obtained with low ionic strength buffer. We propose that, under physiological ionic strength conditions, the hydroxyl groups in the native molecule retain water more efficiently thus favoring correct fibril formation. The importance of hydroxyproline in collagen self-assembly suggested by others from the crystal structures of collagen model peptides is thus confirmed experimentally on the entire collagen molecule.
- Published
- 2001
48. Collagen XI nucleates self-assembly and limits lateral growth of cartilage fibrils
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Hans-Joachim Galla, Eric F. Eikenberry, Ulrich Blaschke, David J.S. Hulmes, Peter Bruckner, and Deleage, Gilbert
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Cartilage, Articular ,Sternum ,Growth control ,Chick Embryo ,Fibril ,Biochemistry ,Fibril formation ,Polymer chemistry ,medicine ,[SDV.BBM] Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Embryonic cartilage ,Animals ,Molecular Biology ,Cells, Cultured ,Diameter control ,Collagen ii ,Chemistry ,Cartilage ,Cell Biology ,Models, Structural ,Kinetics ,Microscopy, Electron ,medicine.anatomical_structure ,Microfibrils ,Biophysics ,Self-assembly ,Collagen - Abstract
Fibrils of embryonic cartilage are heterotypic alloys formed by collagens II, IX, and XI and have a uniform diameter of approximately 20 nm. The molecular basis of this lateral growth control is poorly understood. Collagen II subjected to fibril formation in vitro produced short and tapered tactoids with strong D-periodic banding. The maximal width of these tactoids varied over a broad range. By contrast, authentic mixtures of collagens II, IX, and XI yielded long and weakly banded fibrils, which, strikingly, had a uniform width of about 20 nm. The same was true for mixtures of collagens II and XI lacking collagen IX as long as the molar excess of collagen II was less than 8-fold. At higher ratios, the proteins assembled into tactoids coexisting with cartilage-like fibrils. Therefore, diameter control is an inherent property of appropriate mixtures of collagens II and XI. Collagen IX is not essential for this feature but strongly increases the efficiency of fibril formation. Therefore, this protein may be an important stabilizing factor of cartilage fibrils.Fibrils of embryonic cartilage are heterotypic alloys formed by collagens II, IX, and XI and have a uniform diameter of approximately 20 nm. The molecular basis of this lateral growth control is poorly understood. Collagen II subjected to fibril formation in vitro produced short and tapered tactoids with strong D-periodic banding. The maximal width of these tactoids varied over a broad range. By contrast, authentic mixtures of collagens II, IX, and XI yielded long and weakly banded fibrils, which, strikingly, had a uniform width of about 20 nm. The same was true for mixtures of collagens II and XI lacking collagen IX as long as the molar excess of collagen II was less than 8-fold. At higher ratios, the proteins assembled into tactoids coexisting with cartilage-like fibrils. Therefore, diameter control is an inherent property of appropriate mixtures of collagens II and XI. Collagen IX is not essential for this feature but strongly increases the efficiency of fibril formation. Therefore, this protein may be an important stabilizing factor of cartilage fibrils.
- Published
- 2000
49. Articular cartilage proteoglycan metabolism in avian degenerative joint disease: effects of strain selection and body weight
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David J.S. Hulmes, B.H. Thorp, N. Venkatesan, and Deleage, Gilbert
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Cartilage, Articular ,medicine.medical_specialty ,Fowl ,Tibiotarsus ,Tarsometatarsus ,Strain (injury) ,Biochemistry ,Glycosaminoglycan ,Rheumatology ,Internal medicine ,Osteoarthritis ,medicine ,[SDV.BBM] Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Animals ,Orthopedics and Sports Medicine ,Molecular Biology ,Cells, Cultured ,Electrophoresis, Agar Gel ,biology ,Chemistry ,Cartilage ,Body Weight ,Broiler ,food and beverages ,Cell Biology ,biology.organism_classification ,medicine.disease ,carbohydrates (lipids) ,Endocrinology ,medicine.anatomical_structure ,Proteoglycan metabolism ,Electrophoresis, Polyacrylamide Gel ,Proteoglycans ,Chickens - Abstract
The effects of strain selection and body weight on proteoglycan metabolism and the onset of degenerative joint disease (DJD) were investigated in avian articular cartilage. Samples from the hock joint (proximal tarsometatarsus, PTM; distal tibiotarsus, DTT) of rapidly growing broiler fowl, fed either ad libitum or on a restricted-diet, were compared with those from a slow growing, light and non-selected strain (J-line). Synthesis and degradation of proteoglycans were investigated by radioactive pulse-chase studies, determination of total sulphated glycosaminoglycans and electrophoretic analysis. By gross morphology, degenerative changes in articular cartilage occurred solely in the DTT from ad libitum-fed broiler fowl, after 13 weeks. Differences in proteoglycan metabolism were also observed, most markedly in the DTT, where the rate of proteoglycan synthesis in the ad libitum-fed group was less than in age-matched J-line cartilage, and the proportions of both newly synthesised and resident proteoglycans released into the culture medium were greater. Results with the feed-restricted group were intermediate between ad libitum-fed and J-line. Electrophoretic analysis of proteoglycans in the culture media showed evidence of degradation solely in the ad libitum-fed group, with earliest onset in the DTT. The results indicate that proteoglycan metabolism in avian articular cartilage is similar to that in mammalian cartilage during the development of DJD, and that the onset of cartilage degeneration is linked with excessive load bearing.The effects of strain selection and body weight on proteoglycan metabolism and the onset of degenerative joint disease (DJD) were investigated in avian articular cartilage. Samples from the hock joint (proximal tarsometatarsus, PTM; distal tibiotarsus, DTT) of rapidly growing broiler fowl, fed either ad libitum or on a restricted-diet, were compared with those from a slow growing, light and non-selected strain (J-line). Synthesis and degradation of proteoglycans were investigated by radioactive pulse-chase studies, determination of total sulphated glycosaminoglycans and electrophoretic analysis. By gross morphology, degenerative changes in articular cartilage occurred solely in the DTT from ad libitum-fed broiler fowl, after 13 weeks. Differences in proteoglycan metabolism were also observed, most markedly in the DTT, where the rate of proteoglycan synthesis in the ad libitum-fed group was less than in age-matched J-line cartilage, and the proportions of both newly synthesised and resident proteoglycans released into the culture medium were greater. Results with the feed-restricted group were intermediate between ad libitum-fed and J-line. Electrophoretic analysis of proteoglycans in the culture media showed evidence of degradation solely in the ad libitum-fed group, with earliest onset in the DTT. The results indicate that proteoglycan metabolism in avian articular cartilage is similar to that in mammalian cartilage during the development of DJD, and that the onset of cartilage degeneration is linked with excessive load bearing.
- Published
- 1999
50. Structural requirements for fibromodulin binding to collagen and the control of type I collagen fibrillogenesis--critical roles for disulphide bonding and the C-terminal region
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Marguerite-Marie Boutillon, David J.S. Hulmes, Denise Eichenberger, Bernard Font, and D. Goldschmidt
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Decorin ,Lumican ,Protein Conformation ,Biochemistry ,Animals ,Amino Acid Sequence ,Disulfides ,Extracellular Matrix Proteins ,biology ,Chemistry ,Biglycan ,Circular Dichroism ,Hydrolysis ,Fibrillogenesis ,Cell biology ,carbohydrates (lipids) ,Collagen, type I, alpha 1 ,Microscopy, Electron ,Proteoglycan ,biology.protein ,Cattle ,Proteoglycans ,Spectrophotometry, Ultraviolet ,Collagen ,Carrier Proteins ,Type I collagen ,Fibromodulin ,Binding domain ,Protein Binding - Abstract
Fibromodulin belongs to the family of small, leucine-rich proteoglycans which have been reported tointeract with collagens and to inhibit type I collagen fibrillogenesis. Decorin and fibromodulin exhibit anoticeable degree of sequence similarity. However, as previously reported [Font, B., Eichenberger, D.,Rosenberg, L. M. & van der Rest, M. (1996) Matrix Biol. 15,3412348] the domains of these moleculesimplicated in the interactions with type XII and type XIV collagens are different, these being the dermatansulphate/chondroitin sulphate chain for decorin and the core protein for fibromodulin. At the present timethe fibromodulin domains implicated in the interactions with fibrillar collagens remain unknown. Inexperiments reported here, we have sought to identify the structural requirements for fibromodulin in-teraction with collagen and for the control of type I collagen fibrillogenesis. Circular dichroism spectraand fibrillogenesis inhibition studies show that fibromodulin structure and its collagen fibrillogenesiscontrol function are strictly dependent on the presence of intact disulphide bridge(s). In addition, weshow that the binding of fibromodulin (or fibromodulin-derived fragments) to type I collagen is notnecessarily correlated with fibrillogenesis inhibition. To isolate fibromodulin domains, the native proteog-lycan was submitted to mild proteolysis. We have isolated an A-chymotrypsin2resistant fragment whichcontains the bulk of the N-terminal and central region of the molecule including the leucine-rich repeats4 and 6 reported for decorin to be involved in type I collagen binding. This fragment does not bind totype I collagen. Using enzymes with different specificities, a number of large fragments of fibromodulinwere obtained, suggesting a compact structure for this molecule which is relatively resistant to proteolysis.None of these N-glycosylated fragments were able to bind to type I collagen in co-sedimentation experi-ments. Taken together these results suggest that fibromodulin-type I collagen interactions leading tofibrillogenesis inhibition require more than one binding domain. One of these domains could be the C-terminal end of the molecule containing the disulphide loop which is absent in the chymotrypsin-resistantfragment.Keywords: collagen fibrillogenesis; fibromodulin; proteoglycan domain.In connective tissues, proteoglycans play important roles due cysteine residues, with at least one disulphide bridge, (b) ato their interactions with other components of the extracellular central region with a variable number (10212) of asparagine-matrix [1]. Among proteoglycans, several members of this group containing leucine-rich repeats containing N-linked keratan sul-are structurally related and constitute the small proteoglycan phate (fibromodulin and lumican) or N-linked oligosaccharidesfamily, namely biglycan, decorin, fibromodulin and lumican [2]. (biglycan and decorin) distributed among up to five potentialThese molecules are characterised by a core protein of about sites; and (c) a C-terminal region with a conserved disulphide40 kDa, and by the existence of three distinct regions: (a) a neg- loop.In vivo, small proteoglycans have been shown to associateatively charged N-terminal region with either covalently linked with fibrillar collagens [3]. In recent experiments, it has beendermatan sulphate/chondroitin sulphate (DS/CS) chains (usually reported that targeted disruption of the decorin gene in miceone in decorin and two in biglycan), or tyrosine sulphate in fi- leads to skin with markedly reduced tensile strength and to ab-bromodulin and lumican, and a highly conserved cluster of four normal morphology of collagen fibrils, indicating that in vivodecorin plays a major role in the regulation of fibril formation
- Published
- 1998
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