2,091 results on '"Daniel K"'
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2. DCAF16-Based Covalent Handle for the Rational Design of Monovalent Degraders
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Melissa Lim, Thang Do Cong, Lauren M. Orr, Ethan S. Toriki, Andrew C. Kile, James W. Papatzimas, Elijah Lee, Yihan Lin, and Daniel K. Nomura
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Chemistry ,QD1-999 - Published
- 2024
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3. A Fast-Binding, Functionally Reversible, COX‑2 Radiotracer for CNS PET Imaging
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Michael S. Placzek, Daniel K. Wilton, Michel Weïwer, Mariah A. Manter, Sarah E. Reid, Christopher J. Meyer, Arthur J. Campbell, Besnik Bajrami, Antoine Bigot, Sarah Bricault, Agathe Fayet, Arnaud Frouin, Frederick Gergits, Mehak Gupta, Wei Jiang, Michelle Melanson, Chiara D. Romano, Misha M. Riley, Jessica M. Wang, Hsiao-Ying Wey, Florence F. Wagner, Beth Stevens, and Jacob M. Hooker
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Chemistry ,QD1-999 - Published
- 2024
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4. New Triazole-Based Potent Inhibitors of Human Factor XIIa as Anticoagulants
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Ma’Lik D. Woodland, Anthony Thompson, Amanda Lipford, Navneet Goyal, John C. Schexnaildre, Madhusoodanan Mottamal, Daniel K. Afosah, and Rami A. Al-Horani
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Chemistry ,QD1-999 - Published
- 2024
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5. A Model-Based Approach to Teaching about Solutions
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Eymur, Gülüzar and Capps, Daniel K.
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We present an example of a novel, model-based approach to instruction in which learners constructed a representation of a specific phenomenon, evaluated their representation, and then revised it, via an abstraction process, to construct a model. The example took place in high school in the context of solution chemistry. The aim of the instruction was to support students in developing a generalized model for a homogenous mixture where the ratio of the solute and solvent remains the same throughout the solution. Students also developed a general model of the effect of pressure and temperature on solubility. Pre- and posttests were administered to provide evidence of student learning because of the experience.
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- 2022
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6. The Enrichment of Whey Protein Isolate Hydrogels with Poly-γ-Glutamic Acid Promotes the Proliferation and Osteogenic Differentiation of Preosteoblasts
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Daniel K. Baines, Varvara Platania, Nikoleta N. Tavernaraki, Mattia Parati, Karen Wright, Iza Radecka, Maria Chatzinikolaidou, and Timothy E. L. Douglas
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whey protein ,γ-PGA ,bone scaffolds ,Raman ,swelling ,biocompatibility ,Science ,Chemistry ,QD1-999 ,Inorganic chemistry ,QD146-197 ,General. Including alchemy ,QD1-65 - Abstract
Osseous disease accounts for over half of chronic pathologies, but there is a limited supply of autografts, the gold standard; hence, there is a demand for new synthetic biomaterials. Herein, we present the use of a promising, new dairy-derived biomaterial: whey protein isolate (WPI) in the form of hydrogels, modified with the addition of different concentrations of the biotechnologically produced protein-like polymeric substance poly-γ-glutamic acid (γ-PGA) as a potential scaffold for tissue regeneration. Raman spectroscopic analysis demonstrated the successful creation of WPI-γ-PGA hydrogels. A cytotoxicity assessment using preosteoblastic cells demonstrated that the hydrogels were noncytotoxic and supported cell proliferation from day 3 to 14. All γ-PGA-containing scaffold compositions strongly promoted cell attachment and the formation of dense interconnected cell layers. Cell viability was significantly increased on γ-PGA-containing scaffolds on day 14 compared to WPI control scaffolds. Significantly, the cells showed markers of osteogenic differentiation; they synthesised increasing amounts of collagen over time, and cells showed significantly enhanced alkaline phosphatase activity at day 7 and higher levels of calcium for matrix mineralization at days 14 and 21 on the γ-PGA-containing scaffolds. These results demonstrated the potential of WPI-γ-PGA hydrogels as scaffolds for bone regeneration.
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- 2023
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7. High brightness red emitting polymer beads for immunoassays: Comparison between trifluoroacetylacetonates of Europium
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Daniel K. Dinga, Ewa Kasprzycka, Israel P. Assunção, Franziska Winterstein, Amina Alizade, Volkan Caliskanyürek, Dirk Blödorn, Johannes Winkle, Ulrich Kynast, and Marina Lezhnina
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rare earth complexes ,luminescence ,polymer beads ,core-shell ,elisa ,lateral flow ,Chemistry ,QD1-999 - Abstract
Efficiently luminescing spherical polymer particles (beads) in the nanoscale regime of up to approximately 250 nm have become very valuable tools in bioanalytical assays. Eu3+- complexes imbedded in polymethacrylate and polystyrene in particular proved to be extraordinarily useful in sensitive immunochemical and multi-analyte assays, and histo- and cytochemistry. Their obvious advantages derive from both, the possibility to realize very high ratios of emitter complexes to target molecules, and the intrinsically long decay times of the Eu3+-complexes, which allows an almost complete discrimination against bothersome autofluorescence via time-gated measuring techniques; the narrow line emission in conjunction with large apparent Stokes shifts are additional benefits with regard to spectral separation of excitation and emission with optical filters. Last but not least, a reasonable strategy to couple the beads to the analytes is mandatory. We have thus screened a variety of complexes and ancillary ligands; the four most promising candidates evaluated and compared to each other were β-diketonates (trifluoroacetylacetonates, R-CO-CH-CO-CF3, R = - thienyl, -phenyl, -naphthyl and -phenanthryl); highest solubilities in polystyrene were obtained with trioctylphosphine co-ligands. All beads had overall quantum yields in excess of 80% as dried powders and lifetimes well beyond 600 µs. Core-shell particles were devised for the conjugation to model proteins (Avidine, Neutravidine). Their applicability was tested in biotinylated titer plates using time gated measurements and a Lateral Flow Assay as practical examples.
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- 2023
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8. Examining a Transition from Supramolecular Halogen Bonding to Covalent Bonds: Topological Analysis of Electron Densities and Energies in the Complexes of Bromosubstituted Electrophiles
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Daniel K. Miller, Cody Loy, and Sergiy V. Rosokha
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Chemistry ,QD1-999 - Published
- 2021
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9. Correction to 'Rational Chemical Design of Molecular Glue Degraders'
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Ethan S. Toriki, James W. Papatzimas, Kaila Nishikawa, Dustin Dovala, Andreas O. Frank, Matthew J. Hesse, Daniela Dankova, Jae-Geun Song, Megan Bruce-Smythe, Heidi Struble, Francisco J. Garcia, Scott M. Brittain, Andrew C. Kile, Lynn M. McGregor, Jeffrey M. McKenna, John A. Tallarico, Markus Schirle, and Daniel K. Nomura
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Chemistry ,QD1-999 - Published
- 2023
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10. Removal of the Micropollutants Propranolol Hydrochloride and 2-Naphthol From Water by Pyridine-Functionalized Polymers
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Qixuan Zheng, Daniel K. Unruh, and Kristin M. Hutchins
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copolymer ,micropollutants ,pharmaceuticals ,polymeric sorbents ,supramolecular ,Chemistry ,QD1-999 - Abstract
The number and concentration of micropollutants in aqueous environments are increasing. Two such micropollutants include the pharmaceutical, propranolol hydrochloride, and dye intermediate, 2-naphthol. Here, we describe the synthesis of both linear and crosslinked pyridine-functionalized copolymers that bind and remove propranolol hydrochloride and 2-naphthol from water solutions. Propranolol hydrochloride and 2-naphthol both contain hydrogen-bond-donor groups, and the pyridine moiety on the polymer acts as a hydrogen-bond acceptor to facilitate removal. Copolymers with different amounts of pyridine comonomer are synthesized, and as the amount of the pyridine comonomer is increased, the ability of the polymer to bind and remove the contaminant also increases. The concentrations of propranolol hydrochloride and 2-naphthol decreased by approximately 20–40% and 60–88%, respectively, depending on the polymer type that is used in the binding experiment. A control polymer was synthesized by using styrene in place of the pyridine monomer. In analogous binding experiments, the styrene polymer decreases the concentration of propranolol hydrochloride by 2% and 2-naphthol by 26%. Thus, the binding effectiveness is significantly reduced when the hydrogen-bond-acceptor group is not present on the polymer. We also show that the best performing crosslinked pyridine-functionalized polymer is reusable. Overall, these polymer adsorbents demonstrate the potential for removal of micropollutants from water.
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- 2022
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11. Manganese-catalyzed aziridination of olefins with chloramine-T in water and buffered aqueous solutions
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Daniel K. Wolgemuth, Sydnee D. Elmore, James D. Cope, Patrick E. Sheridan, Sean L. Stokes, and Joseph P. Emerson
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Manganese ,Catalysis ,Aziridination ,TMPyP4 ,Chloramine-T ,Nitrene transfer ,Chemistry ,QD1-999 - Abstract
A water-soluble, manganese-porphyrin complex was used to catalytically generate aziridines from olefins in moderate to good yields (up to 93%) upon optimization at room temperature and in aqueous media. Reactions using chloramine-T at slightly acidic to neutral pH values showed generally higher catalytic yields. Attempts to integrate this catalytic system into a DNA hybrid catalyst system to support asymmetric aziridination showed little promise, where steric bulk in the axial positions from activation of chloramine-T by this Mn-heme complex may influence its ability to associate with double-stranded DNA.
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- 2021
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12. Stride Length Impacts on Sagittal Knee Biomechanics in Flat Ground Baseball Pitching
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Daniel K. Ramsey and Ryan L. Crotin
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baseball ,pitching ,biomechanics ,injury ,performance ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
Coordinated lower extremity biomechanics are altered in response to changes in stride length, influencing the kinetic chain that potentially induces compensatory throwing mechanics throughout the baseball pitching cycle. The respective sagittal knee dynamic profiles, for both the stride (lead) and drive (trail) leg, were analyzed during flat ground baseball pitching to determine whether the stride length variation elicits compensatory drive and stride leg knee joint kinematics, kinetics, and joint powers. Using a randomized cross-over design, a cohort of 19 healthy skilled competitive pitchers from collegiate and high school travel programs from across Western New York were assigned to throw 2 simulated 80 pitch games at ±25% of their desired stride length. An integrated motion capture system with two force plates and a radar gun tracked each throw. Pairwise comparisons at hallmark events and phases identified significantly different sagittal knee dynamics for both the drive and stride leg between the stride length conditions. During the acceleration phase, the drive knee moments between the stride length conditions demonstrated differences in power generation and absorption. Longer strides allowed for greater knee propulsion dynamics, exemplified by eccentric drive knee extensor moments with a concomitant power absorption that slowed the rate of drive knee flexion (p ≤ 0.001). Conversely, shorter strides generated power through concentric knee flexor moments that increased the rate of drive knee flexion (p ≤ 0.001). Stride knee extensor moments and power generation during the acceleration phase were also significantly higher with shorter strides (p ≤ 0.05). Adapted knee joint dynamics may offer insights into stride length optimization, training, and injury prevention strategies.
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- 2022
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13. Biochemical Studies of Mitochondrial Malate: Quinone Oxidoreductase from Toxoplasma gondii
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Rajib Acharjee, Keith K. Talaam, Endah D. Hartuti, Yuichi Matsuo, Takaya Sakura, Bundutidi M. Gloria, Shinya Hidano, Yasutoshi Kido, Mihoko Mori, Kazuro Shiomi, Masakazu Sekijima, Tomoyoshi Nozaki, Kousuke Umeda, Yoshifumi Nishikawa, Shinjiro Hamano, Kiyoshi Kita, and Daniel K. Inaoka
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toxoplasmosis ,electron transport chain ,mitochondria ,membrane protein ,enzyme inhibition ,ferulenol ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Toxoplasma gondii is a protozoan parasite that causes toxoplasmosis and infects almost one-third of the global human population. A lack of effective drugs and vaccines and the emergence of drug resistant parasites highlight the need for the development of new drugs. The mitochondrial electron transport chain (ETC) is an essential pathway for energy metabolism and the survival of T. gondii. In apicomplexan parasites, malate:quinone oxidoreductase (MQO) is a monotopic membrane protein belonging to the ETC and a key member of the tricarboxylic acid cycle, and has recently been suggested to play a role in the fumarate cycle, which is required for the cytosolic purine salvage pathway. In T. gondii, a putative MQO (TgMQO) is expressed in tachyzoite and bradyzoite stages and is considered to be a potential drug target since its orthologue is not conserved in mammalian hosts. As a first step towards the evaluation of TgMQO as a drug target candidate, in this study, we developed a new expression system for TgMQO in FN102(DE3)TAO, a strain deficient in respiratory cytochromes and dependent on an alternative oxidase. This system allowed, for the first time, the expression and purification of a mitochondrial MQO family enzyme, which was used for steady-state kinetics and substrate specificity analyses. Ferulenol, the only known MQO inhibitor, also inhibited TgMQO at IC50 of 0.822 μM, and displayed different inhibition kinetics compared to Plasmodium falciparum MQO. Furthermore, our analysis indicated the presence of a third binding site for ferulenol that is distinct from the ubiquinone and malate sites.
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- 2021
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14. Using the Universal Design for Learning Approach in Science Laboratories to Minimize Student Stress
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Miller, Daniel K. and Lang, Patricia L.
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This commentary discusses how the principles of universal design for learning (UDL) can be applied in the science laboratory with an emphasis on assisting students who experience stress in the laboratory environment. The UDL approach in the laboratory is based on three elements: open-mindedness, supportive communication, and analysis and adaptation of laboratory curriculum. "Supportive communication", a novel element of our approach comprising interaction methods adapted from counseling therapy, is introduced. A brief discussion of a workshop for chemistry faculty and graduate students on the UDL approach is presented.
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- 2016
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15. Gold-Deposited Nickel Foam as Recyclable Plasmonic Sensor for Therapeutic Drug Monitoring in Blood by Surface-Enhanced Raman Spectroscopy
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Saiqa Muneer, Daniel K. Sarfo, Godwin A. Ayoko, Nazrul Islam, and Emad L. Izake
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meropenem ,nickel foam ,electrodeposition ,therapeutic drug monitoring ,surface enhanced Raman spectroscopy ,HPLC-SERS ,Chemistry ,QD1-999 - Abstract
A sensitive and recyclable plasmonic nickel foam sensor has been developed for surface-enhanced Raman spectroscopy (SERS). A simple electrochemical method was used to deposit flower-shaped gold nanostructures onto nickel foam substrate. The high packing of the gold nanoflowers onto the nickel foam led to a high enhancement factor (EF) of 1.6 × 1011. The new SERS sensor was utilized for the direct determination of the broad-spectrum β-lactam carbapenem antibiotic meropenem in human blood plasma down to one pM. The sensor was also used in High Performance Liquid Chromatography (HPLC)-SERS assembly to provide fingerprint identification of meropenem in human blood plasma. Moreover, the SERS measurements were reproducible in aqueous solution and human blood plasma (RSD = 5.5%) and (RSD = 2.86%), respectively at 200 µg/mL (n = 3), and successfully recycled using a simple method, and hence, used for the repeated determination of the drug by SERS. Therefore, the new sensor has a strong potential to be applied for the therapeutic drug monitoring of meropenem at points of care and intensive care units.
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- 2020
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16. One Dimensional AuAg Nanostructures as Anodic Catalysts in the Ethylene Glycol Oxidation
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Daniel K. Kehoe, Luis Romeral, Ross Lundy, Michael A. Morris, Michael G. Lyons, and Yurii K. Gun’ko
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ultrathin ,nanowire ,anodic catalyst ,tunable ,Chemistry ,QD1-999 - Abstract
Direct alcohol fuel cells are highly promising as efficient power sources for various mobile and portable applications. However, for the further advancement of fuel cell technology it is necessary to develop new, cost-effective Pt-free electrocatalysts that could provide efficient alcohol oxidation and also resist cross-over poisoning. Here, we report new electrocatalytic materials for ethylene glycol oxidation, which are based on AuAg linear nanostructures. We demonstrate a low temperature tunable synthesis that enables the preparation of one dimensional (1D) AuAg nanostructures ranging from nanowires to a new nano-necklace-like structure. Using a two-step method, we showed that, by aging the initial reaction mixture at various temperatures, we produced ultrathin AuAg nanowires with a diameter of 9.2 ± 2 and 3.8 ± 1.6 nm, respectively. These nanowires exhibited a high catalytic performance for the electro-oxidation of ethylene glycol with remarkable poisoning resistance. These results highlight the benefit of 1D metal alloy-based nanocatalysts for fuel cell applications and are expected to make an important contribution to the further development of fuel cell technology.
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- 2020
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17. Facile Photochemical Syntheses of Conjoined Nanotwin Gold-Silver Particles within a Biologically-Benign Chitosan Polymer
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Daniel K. Korir, Bharat Gwalani, Abel Joseph, Brian Kamras, Ravi K. Arvapally, Mohammad A. Omary, and Sreekar B. Marpu
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isotropic ,anisotropic ,photochemical ,bifunctional ,nanomaterials ,plasmonic ,Chemistry ,QD1-999 - Abstract
A simple photochemical method for making conjoined bi-metallic gold-silver (Au/Ag) nanotwins, a new breed of nanoparticles (NPs), is developed. To the best of our knowledge, the photochemical method resulted in distinct, conjoined, bimetallic nanotwins that are different from any well-established alloyed or core-shell nanostructures in the literature. The conjoined Au-Ag NPs possessed surface plasmon resonance (SPR) properties of both metals. The bimetallic nanostructures possessing distinctive optical properties of both metals were obtained using Au NPs as seeds in the first step, followed by the addition of a silver precursor as feed in the second step during a photochemical irradiation process. In the first step, small, isotropic or large, anisotropic Au NPs are generated by photoinduced reduction within a biocompatible chitosan (CS) polymer. In the second step, a silver precursor (AgNO3) is added as the feed to the AuNPs seed, followed by irradiation of the solution in the ice-bath. The entire photochemical irradiation process resulting in the formation of bimetallic Au-AgNPs did not involve any other reducing agents or stabilizing agents other than the CS polymer stabilizer. The small, conjoined Au-Ag bi-metallic NPs exhibited SPR with peak maxima centering at ~400 nm and ~550 nm, whereas the large conjoined nanoparticles exhibited SPR with peak maxima centering at ~400 nm, 550 nm, and 680 nm, characteristic of both gold and silver surface plasmons in solution. The tunability in the SPR and size of the bimetallic NPs were obtained by varying the reaction time and other reaction parameters, resulting in average sizes between 30 and 100 nm. The SPR, size, distribution, and elemental composition of the bi-metallic NPs were characterized using UV-Vis absorption, electron microscopy, and energy dispersive X-ray spectroscopy (EDS) studies.
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- 2019
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18. An Enlightening Reactor
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Daniel K. Kim and Vy M. Dong
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Chemistry ,QD1-999 - Published
- 2017
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19. Dynamic Modelling Reveals 'Hotspots' on the Pathway to Enzyme-Substrate Complex Formation
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Shane E. Gordon, John Wagner, Matthew T. Downton, Daniel K. Weber, and Matthew A. Perugini
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0301 basic medicine ,Protein Conformation ,Staphylococcus ,Plasma protein binding ,Pathology and Laboratory Medicine ,Biochemistry ,01 natural sciences ,Substrate Specificity ,Protein structure ,Enzyme Stability ,Pyruvic Acid ,Biochemical Simulations ,Medicine and Health Sciences ,Staphylococcus Aureus ,lcsh:QH301-705.5 ,Uncategorized ,Crystallography ,Ecology ,biology ,Physics ,Ketones ,Condensed Matter Physics ,Bacterial Pathogens ,Chemistry ,Computational Theory and Mathematics ,Medical Microbiology ,Modeling and Simulation ,Physical Sciences ,Crystal Structure ,Pathogens ,Umbrella sampling ,Research Article ,Protein Binding ,Pyruvate ,Biophysical Simulations ,Markov Models ,Dihydrodipicolinate synthase ,Stereochemistry ,Biophysics ,Molecular Dynamics Simulation ,010402 general chemistry ,Microbiology ,Catalysis ,Protein–protein interaction ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,Genetics ,Solid State Physics ,Binding site ,Protein Interactions ,Microbial Pathogens ,Molecular Biology ,Hydro-Lyases ,Ecology, Evolution, Behavior and Systematics ,Enzyme substrate complex ,Binding Sites ,Bacteria ,Chemical Compounds ,Organisms ,Biology and Life Sciences ,Computational Biology ,Proteins ,Active site ,Probability Theory ,0104 chemical sciences ,Enzyme Activation ,Kinetics ,030104 developmental biology ,Models, Chemical ,lcsh:Biology (General) ,biology.protein ,Acids ,Mathematics - Abstract
Dihydrodipicolinate synthase (DHDPS) catalyzes the first committed step in the diaminopimelate pathway of bacteria, yielding amino acids required for cell wall and protein biosyntheses. The essentiality of the enzyme to bacteria, coupled with its absence in humans, validates DHDPS as an antibacterial drug target. Conventional drug design efforts have thus far been unsuccessful in identifying potent DHDPS inhibitors. Here, we make use of contemporary molecular dynamics simulation and Markov state models to explore the interactions between DHDPS from the human pathogen Staphylococcus aureus and its cognate substrate, pyruvate. Our simulations recover the crystallographic DHDPS-pyruvate complex without a priori knowledge of the final bound structure. The highly conserved residue Arg140 was found to have a pivotal role in coordinating the entry of pyruvate into the active site from bulk solvent, consistent with previous kinetic reports, indicating an indirect role for the residue in DHDPS catalysis. A metastable binding intermediate characterized by multiple points of intermolecular interaction between pyruvate and key DHDPS residue Arg140 was found to be a highly conserved feature of the binding trajectory when comparing alternative binding pathways. By means of umbrella sampling we show that these binding intermediates are thermodynamically metastable, consistent with both the available experimental data and the substrate binding model presented in this study. Our results provide insight into an important enzyme-substrate interaction in atomistic detail that offers the potential to be exploited for the discovery of more effective DHDPS inhibitors and, in a broader sense, dynamic protein-drug interactions., Author Summary Interactions between proteins and ligands underpin many important biological processes, such as binding of substrates to their cognate enzymes in the process of catalysis. These interactions are complex, often requiring several intermediate steps to fully transition into the bound state. Here, we have used computational simulation to study binding of pyruvate to Dihydrodipicolinate synthase (DHDPS), an enzyme in the bacterial diaminopimelate pathway. In bacteria, such as the human pathogen S. aureus, DHDPS functions to make building blocks necessary for protein and bacterial cell wall biosyntheses. As the enzyme is absent in humans, yet essential for bacterial growth, DHDPS is a valid target for broad-range antibiotics. However, known DHDPS inhibitors show poor potency. One avenue that has not yet been taken into consideration for inhibitor design is the dynamics of DHDPS’s interaction with its reaction substrates (e.g. pyruvate). Using molecular dynamics simulation, we find that pyruvate binding to DHDPS must pass through a transition intermediate ‘hotspot’ in which the substrate is held in place by a dense network of noncovalent bonds. Given that many of the protein residues involved in this interaction are also shared by DHDPS from many pathogenic bacteria, this binding intermediate ‘hotspot’ may help in development of better broad-range DHDPS inhibitors.
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- 2023
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20. Transforming a Sword into a Knife: Persistent Phototoxicity Inhibition and Alternative Therapeutical Activation of Highly-Photosensitive Phytochlorin
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Zhigang Chen, Daniel K. Macharia, Peng Geng, Meifang Zhu, Qian Ren, Pu Qiu, Mei Wen, and Nuo Yu
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Photosensitizing Agents ,Porphyrins ,Chlorophyllides ,General Engineering ,Normal tissue ,General Physics and Astronomy ,Photothermal therapy ,Porphyrin ,chemistry.chemical_compound ,Phytochlorin ,Photochemotherapy ,chemistry ,Biosecurity ,Cell Line, Tumor ,Biophysics ,General Materials Science ,Photosensitizer ,Chlorin e6 ,Retina injury ,Phototoxicity - Abstract
The phototoxicity of photosensitizers (PSs) is a double-edged sword with one edge beneficial for destroying tumors while the other is detrimental to normal tissues, and the conventional "OFF-ON" strategy provides temporary inhibition so that phototoxicity would come sooner or later due to the inevitable retention and transformation of PSs in vivo. We herein put forward a strategy to convert "double-edged sword" PSs into "single-edged knife" ones with simultaneously persistent phototoxicity inhibition and alternative multiple therapeutical activation. The Chlorin e6 (Ce6) as the PS model directly assembles with Cu2+ ions into nanoscale frameworks (nFs) whose Cu2+-coordination includes both carboxyl groups and a porphyrin ring of Ce6 instead of Fe3+/Mn2+-coordination with only carboxyl groups. Compared to the high phototoxicity of Ce6, the nFs exhibit efficient energy transfer due to the dual-coordination of paramagnetic Cu2+ ions and the aggregation, achieving the persistent and high phototoxicity inhibition rate of >92%. Alternatively, the nFs not only activate a high photoacoustic contrast and near-infrared (NIR)-driven photothermal efficacy (3.5-fold that of free Ce6) due to the aggregation-enhanced nonradiative transition but also initiate tumor microenvironment modulation, structure disassembly, and chemodynamic effect by Cu2+ ions. Given these merits, the nFs achieve long-term biosecurity, no retina injury under sunlight, and a higher therapeutical output than the photodynamic effect of Ce6. This work presents a possibility of converting numerous highly phototoxic porphyrins into safe and efficient ones.
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- 2021
21. Pharmacokinetics of bempedoic acid in patients with renal impairment
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William J. Sasiela, Perry Tresh, Maurice G. Emery, Daniel K. Ries, and Benny M. Amore
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Male ,medicine.medical_specialty ,ATP citrate lyase ,Urology ,Renal function ,urologic and male genital diseases ,General Biochemistry, Genetics and Molecular Biology ,chemistry.chemical_compound ,Pharmacokinetics ,medicine ,Humans ,Dicarboxylic Acids ,Renal Insufficiency ,General Pharmacology, Toxicology and Pharmaceutics ,Adverse effect ,Cholesterol ,business.industry ,General Neuroscience ,Incidence (epidemiology) ,Fatty Acids ,General Medicine ,Bioavailability ,chemistry ,Free fraction ,Area Under Curve ,Female ,business - Abstract
Bempedoic acid is an ATP citrate lyase inhibitor approved for the treatment of hypercholesterolemia. The objective of this phase I study was to assess the pharmacokinetics (PKs) and safety of bempedoic acid in 24 subjects with normal renal function or mild, moderate, or severe renal impairment. All subjects received a single oral bempedoic acid 180-mg dose and PK parameters were monitored for up to 23 days. Resulting estimates of area under the concentration-time curve exposure following bempedoic acid treatment were 1.5-fold, 2.2-fold, and 2.2-fold higher in subjects with mild, moderate, or severe renal impairment, respectively, compared with subjects with normal renal function. With decreases in renal function, plasma free fraction was increased up to 20.1%, whereas total and unbound clearances were decreased by 55.2% and 62.6%, respectively, in subjects with severe renal impairment relative to those with normal renal function. These observed decreases in total and unbound oral clearance in subjects with decreased renal function are not explained by the increases in free fraction and might therefore also be attributable to changes in bioavailability or intrinsic clearance. Bempedoic acid was generally well-tolerated and the incidence and type of adverse events were not affected by the degree of renal impairment. In conclusion, bempedoic acid exposures in subjects with renal impairment were increased up to approximately two-fold with no safety signals identified, consistent with findings in phase III patients with mild or moderate renal impairment. No dose adjustments are necessary for patients with mild or moderate renal impairment.
- Published
- 2021
22. Synthesis and crystal structure of nonacarbonyltris[(2-thia-1,3,5-triaza-7-phosphatricylco[3.3.1.1]decane-κ1 P)-2,2-dioxide]triruthenium(0) – acetonitrile (7/6), C25.71H32.57N9.86O15P3S3Ru3
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Wisdom Ebong, Daniel K. Unruh, Alexandra E. Muniz, David R. Khan, and Jason C. Yarbrough
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Inorganic Chemistry ,chemistry.chemical_compound ,Chemistry ,General Materials Science ,Decane ,Crystal structure ,Condensed Matter Physics ,Acetonitrile ,Medicinal chemistry - Abstract
C25.71H32.57N9.86O15P3S3Ru3, hexagonal, P63 (no. 173), a = 37.24213(9) Å, b = 37.24213(9) Å, c = 11.64828(3) Å, β = 90°, V = 13,991.40(8) Å3, Z = 14, R gt (F) = 0.0406, wR ref(F 2) = 0.1009, T = 100(2) K.
- Published
- 2021
23. Evaluation of urine electrolytes for the diagnosis of hypoadrenocorticism in dogs
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Casey A Dropkin, Daniel K. Langlois, and John M. Kruger
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medicine.medical_specialty ,Hyperkalemia ,Potassium ,Sodium ,Urology ,chemistry.chemical_element ,Hypoadrenocorticism in dogs ,Urine ,Urine sodium ,Excretion ,Electrolytes ,chemistry.chemical_compound ,Dogs ,Animals ,Medicine ,Dog Diseases ,Creatinine ,General Veterinary ,business.industry ,medicine.disease ,chemistry ,medicine.symptom ,business ,Adrenal Insufficiency - Abstract
BACKGROUND Most dogs with primary hypoadrenocorticism (HA) have a mineralocorticoid deficiency, which decreases renal tubular sodium reabsorption and potassium excretion. Limited information is available concerning the clinical value of measuring urine electrolytes to aid in an HA diagnosis. OBJECTIVES We aimed to evaluate the diagnostic utility of urine electrolyte measurements in dogs with HA. METHODS Urine sodium and potassium concentrations were measured in 89 dogs, including 39 dogs with HA and 50 controls with nonadrenal illness. Fractional excretions of sodium (FENa ) and potassium (FEK ) were also calculated. Urine electrolytes and fractional excretion values were compared between the groups. Sensitivities and specificities were determined for various cut-points. RESULTS The median urine sodium to potassium (Na:K) ratio was twofold greater (P 90% sensitivity or specificity provided a corresponding specificity or sensitivity of >50%. When only dogs with abnormal serum or plasma electrolytes were included in the analyses, absolute urine electrolyte concentrations and FENa were not different between study populations (P > .05 for all comparisons), but the FEK was increased (P = .005) and the urine potassium:creatinine ratio was decreased (P
- Published
- 2021
24. Bioaccumulation of Toxic Metals in Commercially Valuable Fish from the Western Region of Ghana
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Ebenezer Ofori-Attah, A K Nyarko, Christopher P. Gordon, Benedicta Y. Fosu-Mensah, Nunoo Fke, Daniel K. Arhinful, Regina Appiah-Opong, Isaac Tuffour, Amoako Ofori, and M Ofosuhene
- Subjects
Wet season ,Cadmium ,Health (social science) ,Health Policy ,Public Health, Environmental and Occupational Health ,Medicine (miscellaneous) ,chemistry.chemical_element ,Zinc ,Health Professions (miscellaneous) ,Mercury (element) ,Animal science ,chemistry ,Bioaccumulation ,Dry season ,Selenium ,Arsenic - Abstract
Fish is an important source of protein, however as human impacts on the environment through industrialization, mining and farming among others is resulting in increased concentration of toxic metals in them. The levels of copper (Cu), arsenic (As), zinc (Zn), lead (Pb), cadmium (Cd), mercury (Hg), and selenium (Se) were analysed in fish samples from the southwestern coast of Ghana using acid digestion and atomic absorption spectrophotometer method. A total of 71 fish species were sampled where 35 species were collected in the wet season (October, 2014) whereas 36 species were collected in the dry season (March, 2015). The average levels of heavy metals detected in the wet season were 1.08 mg/kg for Cu, 9.79 mg/kg for Zn, 4.80 mg/kg for Se, 0.06 mg/kg for Pb, 0.03 mg/kg for Hg, 0.02 mg/kg for As, and 0.01 mg/kg for Cd. The average values of heavy metals in fish samples analysed in the dry season were 2.17 mg/kg for Cu, 4.55 mg/kg for Zn, 8.13 mg/kg for Se, 0.06 mg/kg for Pb, 0.03 mg/kg for Hg, 0.09 mg/kg for As, and 0.005 mg/kg for Cd. The results showed that the average levels of toxic metals analysed in the wet season increased in the order of Cd < As
- Published
- 2021
25. Diffusion of Short Semiflexible DNA Polymer Chains in Strong and Moderate Confinement
- Author
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Daniel F. Kienle, Gregory T. Morrin, and Daniel K. Schwartz
- Subjects
chemistry.chemical_classification ,Materials science ,Polymers and Plastics ,Polymers ,Organic Chemistry ,Molecular Conformation ,DNA ,Polymer ,Diffusion ,Inorganic Chemistry ,chemistry.chemical_compound ,chemistry ,Chemical physics ,Materials Chemistry ,Diffusion (business) ,Base Pairing - Abstract
In many technological applications, DNA is confined within nanoenvironments that are smaller than the size of the unconfined polymer in solution. However, the dependence of the diffusion coefficient on molecular weight and characteristic confinement dimension remains poorly understood in this regime. Here, convex lens-induced confinement (CLiC) was leveraged to examine how the diffusion of short DNA fragments varied as a function of slit height by using single-molecule fluorescence tracking microscopy. The diffusion coefficient followed approximate power law behavior versus confinement height, with exponents of 0.27 ± 0.01, 0.32 ± 0.02, and 0.42 ± 0.06 for 692, 1343, and 2686 base pair chains, respectively. The weak dependence on slit height suggests that shorter semiflexible chains may adopt increasingly rodlike conformations and therefore experience weaker excluded-volume interactions as the confinement dimension is reduced. The diffusion coefficient versus molecular weight also exhibited apparent power law behavior, with exponents that varied slightly (from -0.89 to -0.85) with slit height, consistent with hydrodynamic interactions intermediate between Rouse and Zimm model predictions.
- Published
- 2021
26. Ligandability of E3 Ligases for Targeted Protein Degradation Applications
- Author
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Daniel K. Nomura, Bridget P. Belcher, and Carl C. Ward
- Subjects
biology ,medicine.diagnostic_test ,Chemistry ,Proteolysis ,Druggability ,Computational biology ,Protein degradation ,Biochemistry ,Small molecule ,Article ,Ubiquitin ligase ,Ubiquitin ,Proteasome ,Proteome ,biology.protein ,medicine - Abstract
Targeted protein degradation (TPD) using Proteolysis Targeting Chimeras (PROTACs) and molecular glue degraders has arisen as a powerful therapeutic modality for eliminating disease-causing proteins from cells. PROTACs and molecular glue degraders employ heterobifunctional or monovalent small molecules, respectively, to chemically induce the proximity of target proteins with E3 ubiquitin ligases to ubiquitinate and degrade specific proteins via the proteasome. While TPD is an attractive therapeutic strategy for expanding the druggable proteome, only a relatively small number of E3 ligases out of the >600 E3 ligases encoded by the human genome have been exploited by small molecules for TPD applications. Here, we review the existing E3 ligases that have thus far been successfully exploited for TPD and discuss chemoproteomics-enabled covalent screening strategies for discovering new E3 ligase recruiters. We also provide a chemoproteomic map of reactive cysteines within hundreds of E3 ligases which may represent potential ligandable sites that can be pharmacologically interrogated to uncover additional E3 ligase recruiters.
- Published
- 2021
27. A potent SARS-CoV-2 neutralising nanobody shows therapeutic efficacy in the Syrian golden hamster model of COVID-19
- Author
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Robert J. Watson, Oliver Carnell, Jordan J. Clark, Francisco J. Salguero, Tessa Prince, William James, Michael J. Elmore, Miriam Weckener, Philip N. Ward, Audrey Le Bas, Chelsea Norman, Susan A. Fotheringham, Raymond J. Owens, Yper Hall, Parul Sharma, James H. Naismith, Adam Harding, Karen R. Buttigieg, Andrew Owen, Peter J. Harrison, Lucile Moynié, Jiandong Huo, Anja Kipar, Miles W. Carroll, Daniel K. Clare, James P. Stewart, Didier Ngabo, H. Mikolajek, Daniel Knott, Maud Dumoux, Joshua Dormon, Julia A. Tree, and Julian A. Hiscox
- Subjects
Male ,medicine.medical_treatment ,Science ,Mutant ,Intraperitoneal injection ,Dose-Response Relationship, Immunologic ,General Physics and Astronomy ,Hamster ,Alpha (ethology) ,Crystallography, X-Ray ,Article ,General Biochemistry, Genetics and Molecular Biology ,Epitope ,Epitopes ,Neutralization Tests ,medicine ,Antibody fragment therapy ,Animals ,Administration, Intranasal ,X-ray crystallography ,Multidisciplinary ,Mesocricetus ,biology ,SARS-CoV-2 ,Chemistry ,Cryoelectron Microscopy ,General Chemistry ,Single-Domain Antibodies ,biology.organism_classification ,Antibodies, Neutralizing ,Virology ,COVID-19 Drug Treatment ,Disease Models, Animal ,Spike Glycoprotein, Coronavirus ,biology.protein ,Female ,Antibody ,Golden hamster - Abstract
SARS-CoV-2 remains a global threat to human health particularly as escape mutants emerge. There is an unmet need for effective treatments against COVID-19 for which neutralizing single domain antibodies (nanobodies) have significant potential. Their small size and stability mean that nanobodies are compatible with respiratory administration. We report four nanobodies (C5, H3, C1, F2) engineered as homotrimers with pmolar affinity for the receptor binding domain (RBD) of the SARS-CoV-2 spike protein. Crystal structures show C5 and H3 overlap the ACE2 epitope, whilst C1 and F2 bind to a different epitope. Cryo Electron Microscopy shows C5 binding results in an all down arrangement of the Spike protein. C1, H3 and C5 all neutralize the Victoria strain, and the highly transmissible Alpha (B.1.1.7 first identified in Kent, UK) strain and C1 also neutralizes the Beta (B.1.35, first identified in South Africa). Administration of C5-trimer via the respiratory route showed potent therapeutic efficacy in the Syrian hamster model of COVID-19 and separately, effective prophylaxis. The molecule was similarly potent by intraperitoneal injection., Neutralizing nanobodies (Nb) are of considerable interest as therapeutic agents for COVID-19 treatment. Here, the authors functionally and structurally characterize Nbs that bind with high affinity to the receptor binding domain of the SARS-CoV-2 spike protein and show that an engineered homotrimeric Nb prevents disease progression in a Syrian hamster model of COVID-19 when administered intranasally.
- Published
- 2021
28. CryoEM structure of the super-constricted two-start dynamin 1 filament
- Author
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Daniel K. Clare, Jun Liu, Peijun Zhang, Alvarez Fjd., and J K Noel
- Subjects
endocrine system ,Protein Conformation ,Science ,General Physics and Astronomy ,GTPase ,macromolecular substances ,Molecular Dynamics Simulation ,Endocytosis ,General Biochemistry, Genetics and Molecular Biology ,GTP Phosphohydrolases ,Protein filament ,03 medical and health sciences ,0302 clinical medicine ,Humans ,Dynamin I ,030304 developmental biology ,Dynamin ,0303 health sciences ,Multidisciplinary ,Chemistry ,Vesicle ,Cryoelectron Microscopy ,Pleckstrin Homology Domains ,General Chemistry ,Pleckstrin homology domain ,Membrane ,030220 oncology & carcinogenesis ,Mutation ,Helix ,Biophysics ,Thermodynamics ,Guanosine Triphosphate ,Protein Multimerization ,biological phenomena, cell phenomena, and immunity ,Algorithms - Abstract
Dynamin belongs to the large GTPase superfamily, and mediates the fission of vesicles during endocytosis. Dynamin molecules are recruited to the neck of budding vesicles to assemble into a helical collar and to constrict the underlying membrane. Two helical forms were observed: the one-start helix in the constricted state and the two-start helix in the super-constricted state. Here we report the cryoEM structure of a super-constricted two-start dynamin 1 filament at 3.74 A resolution. The two strands are joined by the conserved GTPase dimeric interface. In comparison with the one-start structure, a rotation around Hinge 1 is observed, essential for communicating the chemical power of the GTPase domain and the mechanical force of the Stalk and PH domain onto the underlying membrane. The Stalk interfaces are well conserved and serve as fulcrums for adapting to changing curvatures. Relative to one-start, small rotations per interface accumulate to bring a drastic change in the helical pitch. Elasticity theory rationalizes the diversity of dynamin helical symmetries and suggests corresponding functional significance. Dynamin mediates the fission of vesicles during endocytosis. Here, the authors report the cryoEM structure of a super-constricted two-start dynamin 1 filament- one of the two known helical forms of dynamin, with insights into the molecular mechanisms of dynamin-mediated membrane scission.
- Published
- 2021
29. Examining a Transition from Supramolecular Halogen Bonding to Covalent Bonds: Topological Analysis of Electron Densities and Energies in the Complexes of Bromosubstituted Electrophiles
- Author
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Sergiy V. Rosokha, Daniel K. Miller, and Cody Loy
- Subjects
Halogen bond ,Chemistry ,General Chemical Engineering ,Binding energy ,Atoms in molecules ,Supramolecular chemistry ,General Chemistry ,Article ,Bond length ,symbols.namesake ,Crystallography ,Covalent bond ,Electrophile ,symbols ,Van der Waals radius ,QD1-999 - Abstract
The transition from weak (noncovalent) interactions to fully developed covalent bonds is examined using the quantum theory of atoms in molecules in a series of halogen-bonded (XB) complexes of bromosubstituted electrophiles, RBr, with 1,4-diazabicyclo[2.2.2]octane (DABCO) and Cl– and Br– anions. The gradual decrease in the XB lengths in these associations, dBr···Y (where Y = Cl–, Br–, or N), was accompanied by the exponential increase in the binding energies and charge transfer, as well as electron densities and magnitudes of the kinetic and potential energy densities at the bond critical points (BCPs) on the Br···Y bond path. These indices, as well as characteristics of the adjacent bonds in the XB donor, followed remarkably close trend lines when plotted against the normalized XB length RBrY = dBr···Y/(rBr + rY) (where rBr and rY are the van der Waals radii) regardless of the methods [MP2/6-311+G(d,p) or M062X/6-311+G(d,p)], media (gas phase or dichloromethane), and nucleophiles (Cl–, Br–, or DABCO). In the systems with an RBrY higher than about 0.78, the energy densities H(r) at BCPs at the Br···Y bond path were small and positive, and XBs did not substantially affect the characteristics of the adjacent R–Br covalent bond in the XB donor. Accordingly, the XB can be identified as noncovalent in this range. In the complexes with RBrY values between about 0.67 and 0.78, energy densities H(r) at Br···Y BCPs were negative, and their magnitudes increased with the decrease in the Br···Y separation. In this range, formation of XBs was accompanied by the increase in the R–Br bond length in the XB donor and the decrease in the magnitude of the (negative) H(r) values at the BCPs of the R–Br bonds. XBs can be classified as partially covalent in this RBrY range. At an RBrY less than about 0.67, electron densities were larger, and energy densities were more negative at BCPs of the Br···Y bond than those at BCPs of the R–Br bond in the XB donor. This indicates that Br···Y bonds were stronger than R–Br bonds, and these (Br···Y) XBs can be regarded as essentially covalent. The synchronous change of a variety of (R–Br and Br···Y) bonding characteristics with RBrY suggests that the normalized XB bond length can be used as a basic parameter in the identification of the type of intermolecular interaction. A continuity of these characteristics suggests an inherent relationship between limiting (covalent and noncovalent) types of XBs and thus an onset of molecular–orbital interactions in the weaker bonds.
- Published
- 2021
30. Multiple corticosteroid abnormalities in cats with hyperaldosteronism
- Author
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Kent R. Refsal, Cailin C. Harro, Michal Mazaki-Tovi, and Daniel K. Langlois
- Subjects
medicine.medical_specialty ,Hydrocortisone ,Normal aldosterone ,medicine.drug_class ,Veterinary medicine ,Standard Article ,cortisol ,progesterone ,Cat Diseases ,chemistry.chemical_compound ,Endocrinology ,Adrenocorticotropic Hormone ,Interquartile range ,Corticosterone ,Internal medicine ,Hyperaldosteronism ,SF600-1100 ,medicine ,Animals ,adrenal cancer ,Aldosterone ,Retrospective Studies ,CATS ,General Veterinary ,business.industry ,corticosterone ,ADRENAL CORTICOSTEROIDS ,medicine.disease ,Standard Articles ,chemistry ,Cats ,Corticosteroid ,SMALL ANIMAL ,business - Abstract
Background The frequency with which multiple corticosteroid abnormalities occur in cats with aldosterone secreting adrenocortical tumors is unknown. Objectives To evaluate adrenal‐derived corticosteroids in cats in which blood samples were submitted for measure of aldosterone. Animals Two hundred ninety‐seven cats. Methods Retrospective study. Analysis of a convenience sample of previously submitted serum or plasma. Progesterone, corticosterone, and cortisol were measured in feline serum or plasma samples submitted to an endocrinology laboratory for aldosterone measurements. Demographics and clinical history were retrieved from submittal forms when provided. Statistical testing was performed to investigate associations among the adrenal corticosteroids. Results Progesterone and corticosterone concentrations were strongly correlated (ρ = 0.74; P
- Published
- 2021
31. In Situ Grain Growth of Nanograined Magnetite under Ion Irradiation at Room Temperature and 500 ℃
- Author
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Tiffany C. Kaspar, Daniel K. Schreiber, Ryan Schoell, Chris McRobie, and Djamel Kaoumi
- Subjects
In situ ,chemistry.chemical_compound ,Grain growth ,Materials science ,chemistry ,Chemical engineering ,Irradiation ,Instrumentation ,Magnetite ,Ion - Published
- 2021
32. Behavioural responses of Phlebotomus duboscqi to plant‐derived volatile organic compounds
- Author
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Iman B. Hassaballa, David P. Tchouassi, Baldwyn Torto, Damaris Matoke-Muhia, Daniel K. Masiga, and Catherine L. Sole
- Subjects
Male ,Leishmaniasis, Cutaneous ,Zoology ,Biology ,Ocimene ,chemistry.chemical_compound ,Cutaneous leishmaniasis ,parasitic diseases ,medicine ,Animals ,Ecology, Evolution, Behavior and Systematics ,Volatile Organic Compounds ,General Veterinary ,fungi ,food and beverages ,Fabaceae ,medicine.disease ,Leishmania ,biology.organism_classification ,Kenya ,Attraction ,Olfactometer ,chemistry ,Phlebotomus ,Insect Science ,Vector (epidemiology) ,Kairomone ,Female ,Parasitology ,Psychodidae - Abstract
Phlebotomine sand flies are vectors of Leishmania parasites that cause leishmaniases. Both sexes of sand flies feed on plants primarily for sugars, although the chemical cues that mediate attraction to host plants remain largely unknown. Previously, using coupled gas chromatography-mass spectrometry, the authors identified several volatile organic compounds (VOCs) common to preferred host plants for selected Afrotropical sand flies from the Fabaceae family. Of the identified volatiles, the significance of the monoterpenes linalool oxide, ocimene and p-cymene and the benzenoid m-cresol, p-cresol in sand fly behaviour is unknown. In olfactometer assays, the authors tested these compounds singly and in blends for their attractiveness to Phlebotomus duboscqi, cutaneous leishmaniasis vector in Kenya. In dose-response assays, single compounds increased the responses of males and females over controls, but their optimum attractive doses varied between the sexes. Two five-component blends, referred to as Blend-f and Blend-m for females and males respectively, were formulated and tested in dose-response assays against 1-octen-3-ol (positive control). The results of the present study showed that males and females were significantly attracted to varying levels of the two blends. In pairwise assays, the authors evaluated the most attractive of these blends to each sex (i.e., Blend Am for male against Blend Bf for female), revealing that males were attracted to both blends at varying levels, whereas females were indifferent. The study's results demonstrate that plant-derived VOCs can be exploited for sand fly management.
- Published
- 2021
33. Self-Assembly of Complementary Components Using a Tripodal Bismuth Compound: Pnictogen Bonding or Coordination Chemistry?
- Author
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Shiva Moaven, Brandon T. Watson, Brian M. Karl, Thomas J. Polaske, Daniel K. Unruh, Anthony F. Cozzolino, and Nathan P. Bowling
- Subjects
chemistry.chemical_classification ,Chemistry ,Supramolecular chemistry ,chemistry.chemical_element ,Nuclear magnetic resonance spectroscopy ,Crystal engineering ,Coordination complex ,Bismuth ,Inorganic Chemistry ,Crystallography ,Molecular recognition ,Self-assembly ,Physical and Theoretical Chemistry ,Pnictogen - Abstract
Triple pnictogen bonding refers to the ability of a pnictogen atom to engage in three simultaneous pnictogen bonds (PnBs) to a complementary partner through a single pnictogen atom. This supramolecular strategy was recently introduced as a unique facet of pnictogen bonding as compared to other named supramolecular interactions. Here, the ability of bismuth to participate in this phenomenon is demonstrated using Bi((NC9H7)3CH3). The study reveals that Bi engages in stronger PnBs than the analogous Sb system. The results have been contrasted with Bi systems that form strong coordination bonds, and analysis of the electron density along the bond path reveals key differences. The solution behavior of these newly synthesized supramolecules were studied by PFGSE NMR spectroscopy and they are found to remain intact in solution. Molecular design strategies that allow for triple pnictogen bonding should find use in the fields of molecular recognition and crystal engineering.
- Published
- 2021
34. GSH-Sensitive Nanoscale Mn3+-Sealed Coordination Particles as Activatable Drug Delivery Systems for Synergistic Photodynamic-Chemo Therapy
- Author
-
Daniel K. Macharia, Haijun Zhang, Maoquan Li, Nuo Yu, Xiaohan Liu, Zhigang Chen, Qian Ren, Pu Qiu, Mei Wen, and Peng Geng
- Subjects
Materials science ,medicine.medical_treatment ,technology, industry, and agriculture ,Photodynamic therapy ,02 engineering and technology ,Glutathione ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Treatment efficacy ,0104 chemical sciences ,chemistry.chemical_compound ,chemistry ,In vivo ,Drug delivery ,PEG ratio ,medicine ,Biophysics ,Chemo therapy ,General Materials Science ,Doxorubicin ,0210 nano-technology ,medicine.drug - Abstract
Activatable nanoscale drug delivery systems (NDDSs) are promising in maximizing cancer specificity and anticancer efficacy, and a multifunctional metal-organic nanomaterial is one of the new star NDDSs which requires further exploration. Herein, a novel DOX@MnCPs/PEG NDDSs were constructed by first synthesizing Mn3+-sealed coordination particles (MnCPs), modified with a targeted PEGylated polymer, and then loading anticancer drug doxorubicin (DOX). MnCPs were prepared from the assembly of Mn3+ ions and hematoporphyrin monomethyl ether (HMME) molecules. Furthermore, MnCPs had an average size of ∼100 nm and a large surface area (∼52.6 m2 g-1) and porosity (∼3.6 nm). After the loading of DOX, DOX@MnCPs/PEG exhibited a high DOX-loading efficacy of 27.2%, and they reacted with glutathione (GSH) to confer structural collapse, leading to the production of Mn2+ ions for enhanced magnetic resonance imaging (MRI), free HMME for augmented photodynamic effect, and free DOX for chemotherapy. As a consequence, these DOX@MnCPs/PEG NDDSs after intravenous injection showed efficient tumor homing and then exerted an obvious suppression for tumor growth rate by synergistic photodynamic-chemo therapy in vivo. Importantly, most of the DOX@MnCPs/PEG NDDSs could be gradually cleared through the renal pathway, and the remaining part could slowly be metabolized via the feces, enabling high biosafety. Therefore, this work provides a type of GSH-sensitive NDDS with biosafety, caner specificity, and multifunctionality for high synergistic treatment efficacy.
- Published
- 2021
35. Site-selective tyrosine bioconjugation via photoredox catalysis for native-to-bioorthogonal protein transformation
- Author
-
Jennifer X. Qiao, Steven Bloom, William R. Ewing, Daniel G. Oblinsky, Gregory D. Scholes, Richard Y.-C. Huang, Daniel K. Kim, Beryl X. Li, and David W. C. MacMillan
- Subjects
chemistry.chemical_classification ,Bioconjugation ,010405 organic chemistry ,Chemistry ,General Chemical Engineering ,Chemical modification ,Photoredox catalysis ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Combinatorial chemistry ,0104 chemical sciences ,Amino acid ,Covalent bond ,Click chemistry ,Bioorthogonal chemistry ,Tyrosine - Abstract
The growing prevalence of synthetically modified proteins in pharmaceuticals and materials has exposed the need for efficient strategies to enable chemical modifications with high site-selectivity. While genetic engineering can incorporate non-natural amino acids into recombinant proteins, regioselective chemical modification of wild-type proteins remains a challenge. Herein, we use photoredox catalysis to develop a site-selective tyrosine bioconjugation pathway that incorporates bioorthogonal formyl groups, which subsequently allows for the synthesis of structurally defined fluorescent conjugates from native proteins. A water-soluble photocatalyst, lumiflavin, has been shown to induce oxidative coupling between a previously unreported phenoxazine dialdehyde tag and a single tyrosine site, even in the presence of multiple tyrosyl side chains, through the formation of a covalent C–N bond. A variety of native proteins, including those with multiple tyrosines, can successfully undergo both tyrosine-specific and single-site-selective labelling. This technology directly introduces aldehyde moieties onto native proteins, enabling rapid product diversification using an array of well-established bioorthogonal functionalization protocols including the alkyne–azide click reaction. Regioselective chemical modification of wild-type proteins remains challenging. Now, by harnessing the varied SOMOphilicity of native tyrosine residues through photoredox catalysis, a site-selective bioconjugation method has been developed. This technology directly incorporates bioorthogonal formyl groups in one step, forming structurally defined fluorescent conjugates that can be rapidly diversified to biorelevant products.
- Published
- 2021
36. Understanding Design Rules for Optimizing the Interface between Immobilized Enzymes and Random Copolymer Brushes
- Author
-
Joel L. Kaar, Daniel K. Schwartz, James S. Weltz, and Héctor Sánchez-Morán
- Subjects
Materials science ,Immobilized enzyme ,Polymers ,Rhizomucor miehei ,02 engineering and technology ,010402 general chemistry ,Methacrylate ,01 natural sciences ,Fungal Proteins ,chemistry.chemical_compound ,Bacterial Proteins ,Enzyme Stability ,Copolymer ,General Materials Science ,Lipase ,biology ,Enzymes, Immobilized ,021001 nanoscience & nanotechnology ,biology.organism_classification ,Combinatorial chemistry ,0104 chemical sciences ,Candida rugosa ,chemistry ,Biocatalysis ,biology.protein ,Candida antarctica ,0210 nano-technology ,Hydrophobic and Hydrophilic Interactions ,Ethylene glycol ,Biotechnology - Abstract
A long-standing goal in the field of biotechnology is to develop and understand design rules for the stabilization of enzymes upon immobilization to materials. While immobilization has sometimes been successful as a strategy to stabilize enzymes, the design of synthetic materials that stabilize enzymes remains largely empirical. We sought to overcome this challenge by investigating the mechanistic basis for the stabilization of immobilized lipases on random copolymer brush surfaces comprised of poly(ethylene glycol) methacrylate (PEGMA) and sulfobetaine methacrylate (SBMA), which represent novel heterogeneous supports for immobilized enzymes. Using several related but structurally diverse lipases, including Bacillus subtilis lipase A (LipA), Rhizomucor miehei lipase, Candida rugosa lipase, and Candida antarctica lipase B (CALB), we showed that the stability of each lipase at elevated temperatures was strongly dependent on the fraction of PEGMA in the brush layer. This dependence was explained by developing and applying a new algorithm to quantify protein surface hydrophobicity, which involved using unsupervised cluster analysis to identify clusters of hydrophobic atoms. Characterization of the lipases showed that the optimal brush composition correlated with the free energy of solvation per enzyme surface area, which ranged from -17.1 kJ/mol·nm2 for LipA to -11.8 kJ/mol·nm2 for CALB. Additionally, using this algorithm, we found that hydrophobic patches consisting of aliphatic residues had a higher free energy than patches consisting of aromatic residues. By providing the basis for rationally tuning the interface between enzymes and materials, this understanding will transform the use of materials to reliably ruggedize enzymes under extreme conditions.
- Published
- 2021
37. Cell membrane camouflaged bismuth nanoparticles for targeted photothermal therapy of homotypic tumors
- Author
-
Ahmed Sharjeel, Han Yan, Changrui Lu, Qin Jiang, Daniel K. Macharia, Xiaoling Ren, Zhigang Chen, Nuo Yu, Shuangping Yang, and Peng Geng
- Subjects
Biocompatibility ,Photothermal Therapy ,Nanoparticle ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,Biomaterials ,Cell membrane ,Mice ,Colloid and Surface Chemistry ,Neoplasms ,Zeta potential ,medicine ,Animals ,Chemistry ,Cell Membrane ,Photothermal effect ,Phototherapy ,Photothermal therapy ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Membrane ,medicine.anatomical_structure ,Cancer cell ,Biophysics ,Nanoparticles ,0210 nano-technology ,Bismuth - Abstract
Bi nanoparticles (NPs) have been demonstrated as effective all-in-one type theranostic agent for imaging-guided photothermal therapy, but their applications have been limited by relatively low biocompatibility and target accumulation capacity. To address this issue, we report the camouflage of Bi NPs (size: ~42 ± 2 nm) by using the mouse colon cancer CT26 cells membrane (CT26 CCM). The camouflaging process confers the efficient coating of CCM shell layer with thickness of ~8 ± 2 nm on Bi NPs cores, which can be confirmed by TEM image, zeta potential and protein gel electrophoresis tests. Simultaneously, CCM shell has no side effects on the photoabsorption/photothermal effect. Importantly, Bi@CCM NPs retain significant features of CCM, including good biocompatibility and homologous targeting ability. When Bi@CCM dispersion was intravenously (i.v.) injected into mice, they exhibited higher blood circulation half-life (11.5 h, ~2.9 times) and accumulation amount (4.7 ± 0.56% ID/g, ~2.3 times) in homotypic CT26 tumor compared to those (4.0 h in blood and 2.03 ± 0.60% ID/g in tumor) from uncoated Bi NPs. After 808 nm laser irradiation, CT26 cancer cells could be effectively ablated after the photothermal therapy of high-accumulated Bi@CCM NPs, and then the tumor tends to be eradicated after 12 days. Thus, Bi NPs camouflaged with CT26 CCM have great potential for the targeted photothermal therapy of homotypic tumors.
- Published
- 2021
38. Machine Learning Models of Arsenic in Private Wells Throughout the Conterminous United States As a Tool for Exposure Assessment in Human Health Studies
- Author
-
Lorraine C. Backer, Catherine M. Bulka, Joseph D. Ayotte, Michael J. Focazio, Daniel K. Jones, Patricia L. Toccalino, Debra T. Silverman, Paul M. Bradley, Molly Scannell Bryan, Maria Argos, Matthew O. Gribble, and Melissa A. Lombard
- Subjects
medicine.medical_specialty ,Water Wells ,chemistry.chemical_element ,010501 environmental sciences ,Machine learning ,computer.software_genre ,01 natural sciences ,Article ,Arsenic ,Machine Learning ,Human health ,Water Supply ,medicine ,Humans ,Environmental Chemistry ,Maximum Contaminant Level ,Groundwater ,ARSENIC EXPOSURE ,0105 earth and related environmental sciences ,Exposure assessment ,Groundwater arsenic ,business.industry ,Public health ,General Chemistry ,United States ,chemistry ,Environmental science ,Artificial intelligence ,business ,computer ,Water Pollutants, Chemical ,Environmental Monitoring - Abstract
Arsenic from geologic sources is widespread in groundwater within the United States (U.S.). In several areas, groundwater arsenic concentrations exceed the U.S. Environmental Protection Agency maximum contaminant level of 10 μg per liter (μg/L). However, this standard applies only to public-supply drinking water and not to private-supply, which is not federally regulated and is rarely monitored. As a result, arsenic exposure from private wells is a potentially substantial, but largely hidden, public health concern. Machine learning models using boosted regression trees (BRT) and random forest classification (RFC) techniques were developed to estimate probabilities and concentration ranges of arsenic in private wells throughout the conterminous U.S. Three BRT models were fit separately to estimate the probability of private well arsenic concentrations exceeding 1, 5, or 10 μg/L whereas the RFC model estimates the most probable category ≤5, >5 to ≤10, or >10 μg/ L). Overall, the models perform best at identifying areas with low concentrations of arsenic in private wells. The BRT 10 μg/L model estimates for testing data have an overall accuracy of 91.2%, sensitivity of 33.9%, and specificity of 98.2%. Influential variables identified across all models included average annual precipitation and soil geochemistry. Models were developed in collaboration with public health experts to support U.S.-based studies focused on health effects from arsenic exposure.
- Published
- 2021
39. Small Molecule Activation with Intramolecular 'Inverse' Frustrated Lewis Pairs
- Author
-
Daniel K. Unruh, Clemens Krempner, and Chamila P. Manankandayalage
- Subjects
chemistry.chemical_classification ,Double bond ,010405 organic chemistry ,Stereochemistry ,Chemistry ,Organic Chemistry ,Boranes ,General Chemistry ,Nuclear magnetic resonance spectroscopy ,Borane ,010402 general chemistry ,01 natural sciences ,Catalysis ,Frustrated Lewis pair ,Pyrrolidine ,0104 chemical sciences ,Adduct ,chemistry.chemical_compound ,Intramolecular force - Abstract
The intramolecular "inverse" frustrated Lewis pairs (FLPs) of general formula 1-BR2 -2-[(Me2 N)2 C=N]-C6 H4 (3-6) [BR2 =BMes2 (3), BC12 H8 , (4), BBN (5), BBNO (6)] were synthesized and structurally characterized by multinuclear NMR spectroscopy and X-ray analysis. These novel types of pre-organized FLPs, featuring strongly basic guanidino units rigidly linked to weakly Lewis acidic boryl moieties via an ortho-phenylene linker, are capable of activating H-H, C-H, N-H, O-H, Si-H, B-H and C=O bonds. 4 and 5 deprotonated terminal alkynes and acetylene to form the zwitterionic borates 1-(RC≡C-BR2 )-2-[(Me2 N)2 C=NH]-C6 H4 (R=Ph, H) and reacted with ammonia, BnNH2 and pyrrolidine, to generate the FLP adducts 1-(R2 HN→BR2 )-2-[(Me2 N)2 C=NH]-C6 H4 , where the N-H functionality is activated by intramolecular H-bond interactions. In addition, 5 was found to rapidly add across the double bond of H2 CO, PhCHO and PhNCO to form cyclic zwitterionic guanidinium borates in excellent yields. Likewise, 5 is capable of cleaving H2 , HBPin and PhSiH3 to form various amino boranes. Collectively, the results demonstrate that these new types of intramolecular FLPs featuring weakly Lewis acidic boryl and strongly basic guanidino moieties are as potent as conventional intramolecular FLPs with strongly Lewis acidic units in activating small molecules.
- Published
- 2021
40. The gut microbiota composition of Trichoplusia ni is altered by diet and may influence its polyphagous behavior
- Author
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M. Leite-Mondin, Tiffany L. Weir, Daniel K. Manter, Michael J. DiLegge, Marcio C. Silva-Filho, and Jorge M. Vivanco
- Subjects
0301 basic medicine ,media_common.quotation_subject ,Science ,030106 microbiology ,Population ,Microbial communities ,Insect ,Moths ,Biology ,Gut flora ,Article ,Applied microbiology ,Food Preferences ,03 medical and health sciences ,chemistry.chemical_compound ,Botany ,Trichoplusia ,Animals ,Arabidopsis thaliana ,Gene Regulatory Networks ,education ,Phylogeny ,media_common ,Principal Component Analysis ,education.field_of_study ,TOMATE ,Multidisciplinary ,Bacteria ,Behavior, Animal ,Body Weight ,fungi ,food and beverages ,Biodiversity ,Feeding Behavior ,biology.organism_classification ,Diet ,Gastrointestinal Microbiome ,030104 developmental biology ,chemistry ,Genes, Bacterial ,Glucosinolate ,Rhizobium ,Medicine ,Microbiome ,Solanum ,Entomology - Abstract
Insects are known plant pests, and some of them such as Trichoplusia ni feed on a variety of crops. In this study, Trichoplusia ni was fed distinct diets of leaves of Arabidopsis thaliana or Solanum lycopersicum as well as an artificial diet. After four generations, the microbial composition of the insect gut was evaluated to determine if the diet influenced the structure and function of the microbial communities. The population fed with A. thaliana had higher proportions of Shinella, Terribacillus and Propionibacterium, and these genera are known to have tolerance to glucosinolate activity, which is produced by A. thaliana to deter insects. The population fed with S. lycopersicum expressed increased relative abundances of the Agrobacterium and Rhizobium genera. These microbial members can degrade alkaloids, which are produced by S. lycopersicum. All five of these genera were also present in the respective leaves of either A. thaliana or S. lycopersicum, suggesting that these microbes are acquired by the insects from the diet itself. This study describes a potential mechanism used by generalist insects to become habituated to their available diet based on acquisition of phytochemical degrading gut bacteria.
- Published
- 2021
41. Production Process Optimization of Recombinant Erwinia carotovora l‑Asparaginase II in Escherichia coli Fed-Batch Cultures and Analysis of Antileukemic Potential
- Author
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Bruna Coelho de Andrade, Gaby Renard, Adriano Gennari, Leonardo Luís Artico, José Ricardo Teixeira Júnior, Daniel Kuhn, Priscila Pini Zenatti Salles, Claucia Fernada Volken de Souza, Gustavo Roth, Jocelei Maria Chies, José Andrés Yunes, and Luiz Augusto Basso
- Subjects
Chemistry ,QD1-999 - Published
- 2024
- Full Text
- View/download PDF
42. Cocrystallization of Trimethoprim and Solubility Enhancement via Salt Formation
- Author
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Qixuan Zheng, Kristin M. Hutchins, and Daniel K. Unruh
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Active ingredient ,010405 organic chemistry ,Chemistry ,General Chemistry ,010402 general chemistry ,Condensed Matter Physics ,01 natural sciences ,Trimethoprim ,0104 chemical sciences ,Aqueous solubility ,medicine ,Organic chemistry ,General Materials Science ,Solubility ,Salt formation ,medicine.drug - Abstract
Trimethoprim (TMP) is an active pharmaceutical ingredient with poor aqueous solubility. Here, we describe the cocrystallization of TMP with five co-formers, three bipyridines and two monopyridines....
- Published
- 2021
43. Honeycomb molecular network based upon a hydrate of 4,6-dichlororesorcinol and the photoproduct rtct-tetrakis(pyridin-4-yl)cyclobutane
- Author
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Jessica D. Battle, Ryan H. Groeneman, Carlos L. Santana, and Daniel K. Unruh
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Pyridines ,010405 organic chemistry ,Hydrogen bond ,Chemistry ,Hydrogen Bonding ,Bridging ligand ,Crystal structure ,Crystallography, X-Ray ,Ligands ,010402 general chemistry ,Condensed Matter Physics ,Ring (chemistry) ,Crystal engineering ,01 natural sciences ,0104 chemical sciences ,Cyclobutane ,Inorganic Chemistry ,Crystallography ,chemistry.chemical_compound ,Coordination Complexes ,Pyridine ,Materials Chemistry ,Physical and Theoretical Chemistry ,Hydrate ,Cyclobutanes - Abstract
The formation of a self-interpenetrated honeycomb molecular network based upon 4,6-dichlororesorcinol (4,6-diCl res), a water molecule, and the photoproduct rtct-tetrakis(pyridin-4-yl)cyclobutane ( rtct -TPCB) is reported. Interestingly, only three of the four pyridine rings on the central cyclobutane ring are found to engage in O—H...N hydrogen bonds with either the 4,6-diCl res or an included water molecule, resulting in a three-connected net. Notably, the solid (4,6-diCl res)·( rtct -TPCB)·(H2O), C6H4Cl2O2·C24H20N4·H2O, contains channels that run along the crystallographic b axis, which are found to be interpenetrated. Although rtct -TPCB has been employed as a bridging ligand in the formation of numerous metal–organic materials, surprisingly neither the single-component X-ray structure nor any multi-component molecular solids based upon this stereoisomer have been reported previously. Lastly, the single-crystal X-ray structure of the photoproduct rtct -TPCB is also reported.
- Published
- 2021
44. Development of Logic Gate Nanodevices from Fluorogenic <scp>RNA</scp> Aptamers
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Daniel K. Miller, Emil F. Khisamutdinov, Rachel Fitzgerald, and Trinity Jackson
- Subjects
RNA Aptamers ,Chemistry ,Logic gate ,Nanotechnology - Published
- 2021
45. Radiation-grafted anion-exchange membranes for reverse electrodialysis: a comparison of N,N,N′,N′-tetramethylhexane-1,6-diamine crosslinking (amination stage) and divinylbenzene crosslinking (grafting stage)
- Author
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Daniel K. Whelligan, Terry R. Willson, Siân A. Franklin, Mehdi Choolaei, Carol Crean, Judy Lee, John R. Varcoe, and Rachida Bance-Soualhi
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Aqueous solution ,Ion exchange ,Renewable Energy, Sustainability and the Environment ,General Chemistry ,Grafting ,Divinylbenzene ,chemistry.chemical_compound ,Monomer ,Membrane ,chemistry ,Diamine ,Polymer chemistry ,General Materials Science ,Amination - Abstract
Radiation-grafted anion-exchange membranes (RG-AEM) are being developed to evaluate a range of chemistries that have relevance to a variety of electrochemical applications including reverse electrodialysis (RED) salinity gradient power. RG-AEMs are typically fabricated using an electron-beam activated (peroxidated) polymer substrate film. These activated films are first grafted with a monomer, such as vinylbenzyl chloride (VBC) and then reacted with a variety of tertiary amines to yield the desired RG-AEMs. The amination process forms covalently bound quaternary ammonium (QA) head-groups that allow the RG-AEMs to conduct anions such as Cl−. RG-AEMs are of interest as they exhibit high conductivities (100 mS cm−1 at elevated temperatures when containing Cl− anions). However, the current generation of RG-AEMs have two main Achilles' heels: (1) they exhibit low permselectivities; and (2) they exhibit a high degree of swelling in water. Introducing covalent crosslinking into ion-exchange membranes is a well-known strategy to overcome these issues but it often comes with a price – a significantly lowered conductivity (raised in situ resistance). Therefore, the level of crosslinking must be carefully optimised. RG-AEMs can be primarily crosslinked using two methods: (1) introduction of a divinyl monomer into the monomer mixture used during grafting; or (2) introduction of a diamine agent into the amination process. This study looks into both methods where either divinylbenzene (DVB) is added into the grafting mixture or N,N,N′,N′-tetramethylhexane-1,6-diamine (TMHDA) is added into the amination mixture. We show that on the balance of two application-relevant properties (resistances in aqueous NaCl (0.5 mol dm−3) solution and permselectivity), the diamine crosslinking method is the most effective for RG-AEMs being used in RED cells.
- Published
- 2021
46. Solid-state behaviors of imines: colossal biaxial positive thermal expansion, motion capability, and phase transitions
- Author
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Daniel K. Unruh, Ethan Zahid, Kristin M. Hutchins, and Navkiran Kaur Juneja
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Olefin fiber ,Phase transition ,Materials science ,Flexibility (anatomy) ,Imine ,Solid-state ,Motion (geometry) ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,01 natural sciences ,Static disorder ,Thermal expansion ,0104 chemical sciences ,chemistry.chemical_compound ,medicine.anatomical_structure ,chemistry ,Chemical physics ,medicine ,General Materials Science ,0210 nano-technology - Abstract
Pedal motion or static disorder in single-component solids containing imine groups is demonstrated. Unique solid-state behaviors including colossal biaxial positive thermal expansion in one solid and a temperature-dependent phase transition in another are discussed. Imines exhibit torsional flexibility, which differs from the isoelectronic azo and olefin groups and influences solid-state behaviors.
- Published
- 2021
47. Positive thermal expansion facilitates the formation of argentophilic forces following an order–disorder phase transition
- Author
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Daniel K. Unruh, Kristin M. Hutchins, Ryan H. Groeneman, and Navkiran Kaur Juneja
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chemistry.chemical_classification ,Phase transition ,Order (biology) ,Chemistry ,Chemical physics ,Ligand ,Materials Chemistry ,General Chemistry ,Trifluoromethanesulfonate ,Catalysis ,Thermal expansion ,Coordination complex - Abstract
Argentophilic forces are formed in a coordination complex based on silver(I) trifluoromethanesulfonate and 4-stilbazole as a ligand. The forces are absent at low temperature and form as a result of an order–disorder phase transition that occurs upon heating. Colossal positive thermal expansion also precedes the phase transition.
- Published
- 2021
48. Asymmetric synthesis of functionalized 2,3-dihydrobenzofurans using salicyl N-phosphonyl imines facilitated by group-assisted purification (GAP) chemistry
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Sai Zhang, Kazimierz Surowiec, Yao Tang, Hossein Rouh, Ahmed I. M. Ali, Daniel K. Unruh, and Guigen Li
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Annulation ,Enantiopure drug ,Chemistry ,Group (periodic table) ,Organic Chemistry ,Enantioselective synthesis ,Absolute configuration ,Separation method ,Physical and Theoretical Chemistry ,Biochemistry ,Combinatorial chemistry ,Domino - Abstract
In this work, we present a strategy for the preparation of functionalized 2,3-dihydrobenzofuran derivatives via the Cs2CO3-catalyzed domino annulation of enantiopure chiral salicyl N-phosphonyl imines with bromo malonates, which offers an avenue for the construction of 2,3-dihydrobenzofurans. Nineteen examples were synthesized in impressive chemical yields and diastereoselectivity. The products were purified simply by washing the crude mixtures with hexanes following group-assisted purification chemistry/technology to bypass traditional separation methods which often result in a loss of product. The absolute configuration was unambiguously assigned by X-ray structural analysis.
- Published
- 2021
49. Synthesis, structures and catalytic activity of some BINOL based boronates and boronium salts
- Author
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Clemens Krempner, Shipra Garg, and Daniel K. Unruh
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chemistry.chemical_classification ,Annulation ,010405 organic chemistry ,Solid-state ,Oxide ,Nuclear magnetic resonance spectroscopy ,010402 general chemistry ,01 natural sciences ,Medicinal chemistry ,0104 chemical sciences ,Nitrone ,Catalysis ,Inorganic Chemistry ,chemistry.chemical_compound ,chemistry ,Lewis acids and bases - Abstract
The BINOL supported 1,3,2-dioxaborepines [C10H12O2BC6F5(THF)] [(R)-1], [C10H12O2BC6F5(OPEt3)] [(R)-3], [C10H12O2BC6F5]2 [(R,R)-2], [C10H12O2B(OPEt3)2]+[B(O2C10H12)2]− [(R)-6], and [C10H12O2B(OSMe2)2]+[B(O2C10H12)2]− [(R)-7] have been prepared.
- Published
- 2021
50. Carbon monoxide bond cleavage mediated by an intramolecular frustrated Lewis pair: access to new B/N heterocycles via selective incorporation of single carbon atoms
- Author
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Clemens Krempner, Daniel K. Unruh, and Chamila P. Manankandayalage
- Subjects
Metals and Alloys ,General Chemistry ,Borane ,Medicinal chemistry ,Catalysis ,Frustrated Lewis pair ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Adduct ,chemistry.chemical_compound ,chemistry ,Intramolecular force ,Electrophile ,Materials Chemistry ,Ceramics and Composites ,Moiety ,Bond cleavage ,Carbon monoxide - Abstract
Utilizing an intramolecular frustrated Lewis pair (FLP) decorated with a strongly donating guanidino moiety enabled the formation of a thermally remarkably stable FLP-CO adduct, which at 120 °C underwent CO migration to form an acyl borane. Both compounds underwent rapid CO cleavage in the presence of strong electrophiles leading to the selective formation of a range of new 1,2- and 1,3-benzazaboroles in good yields under mild conditions.
- Published
- 2021
Catalog
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