1. Tagging Proteins with Fluorescent Reporters Using the CRISPR/Cas9 System and Double-Stranded DNA Donors
- Author
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Jean-Paul Concordet, Sophie Jacquemin, Sylvain Geny, Arnaud Poterszman, Simon Pichard, Alice Brion, Jean-Baptiste Renaud, Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Université de Strasbourg (UNISTRA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Structure et Instabilité des Génomes (STRING), Muséum national d'Histoire naturelle (MNHN)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut de Chimie du CNRS (INC)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), and POTERSZMAN, Arnaud
- Subjects
0301 basic medicine ,Models, Molecular ,Protein Conformation ,Recombinant Fusion Proteins ,Green Fluorescent Proteins ,Gene Expression ,Context (language use) ,Computational biology ,[SDV.BBM.BM] Life Sciences [q-bio]/Biochemistry, Molecular Biology/Molecular biology ,03 medical and health sciences ,Structure-Activity Relationship ,0302 clinical medicine ,Genome editing ,CRISPR ,Humans ,Cloning, Molecular ,Gene ,CRISPR/Cas9 ,ComputingMilieux_MISCELLANEOUS ,Double-stranded DNA donors ,Gene Editing ,Base Sequence ,Drug discovery ,Cas9 ,Chemistry ,[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Molecular biology ,DNA ,Flow Cytometry ,Fluorescent protein ,Protein subcellular localization prediction ,030104 developmental biology ,HEK293 Cells ,Microscopy, Fluorescence ,030220 oncology & carcinogenesis ,Gene Targeting ,Target protein ,CRISPR-Cas Systems ,Plasmids ,RNA, Guide, Kinetoplastida - Abstract
International audience; Macromolecular complexes govern the majority of biological processes and are of great biomedical relevance as factors that perturb interaction networks underlie a number of diseases, and inhibition of protein-protein interactions is a common strategy in drug discovery. Genome editing technologies enable precise modifications in protein coding genes in mammalian cells, offering the possibility to introduce affinity tags or fluorescent reporters for proteomic or imaging applications in the bona fide cellular context. Here we describe a streamlined procedure which uses the CRISPR/Cas9 system and a double-stranded donor plasmid for efficient generation of homozygous endogenously GFP-tagged human cell lines. Establishing cellular models that preserve native genomic regulation of the target protein is instrumental to investigate protein localization and dynamics using fluorescence imaging but also to affinity purify associated protein complexes using anti-GFP antibodies or nanobodies.
- Published
- 2021
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