2,875 results on '"A, Chopra"'
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2. Reform in a General Chemistry Laboratory: How Do Students Experience Change in the Instructional Approach?
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Chopra, I., O'Connor, J., Pancho, R., Chrzanowski, M., and Sandi-Urena, S.
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This qualitative study investigated the experience of a cohort of students exposed consecutively to two substantially different environments in their General Chemistry Laboratory programme. To this end, the first semester in a traditional expository programme was followed by a semester in a cooperative, problem-based, multi-week format. The focus on the experience of a change in the laboratory format is complementary understanding to that from participants exposed to a single format. This work used a phenomenological approach for the reduction, analysis, and interpretation of data gathered from semi-structured student interviews. Through deep analysis, five researchers distilled an outcome space with three fundamental features: (1) ten vectors of change that served as lens to analyse the phenomenon; (2) participants' ability to accurately characterise and differentiate the two instructional environments; and (3) an overarching descriptor that argues that a transition from mindless behaviour to mindful engagement subsumed the experience of a change in the laboratory environment. This outcome space is independent of participants' instructional style preferences. Findings from this work inform the design of laboratory experiences furthering the potential realisation of experimental education at the same time when they extend understanding of learning in the chemistry laboratory.
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- 2017
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3. Discovery of Potential Inhibitors of CDK1 by Integrating Pharmacophore-Based Virtual Screening, Molecular Docking, Molecular Dynamics Simulation Studies, and Evaluation of Their Inhibitory Activity
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Vineeta Teotia, Prakash Jha, and Madhu Chopra
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Chemistry ,QD1-999 - Published
- 2024
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4. Structural, morphological and photoluminescence studies of Ca7Mg2P6O24:RE3+(RE3+= Tb3+, Dy3+) nanophosphor for solid state illumination
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Roshana T. Maske, A.N. Yerpude, Rupesh S. Wandhare, Vibha Chopra, and S.J. Dhoble
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Tb3+ ions ,Dy3+ ions ,Wet chemical method ,XRD ,TEM ,SEM ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
The Ca7Mg2P6O24:RE3+ (RE3+= Tb3+, Dy3+) nanophosphor material was synthesized by traditional wet chemical method. The XRD are used to determine phase and crystallinity of the synthesized sample; further FTIR, SEM, TEM, and PL properties were studied. The XRD pattern of prepared sample match well with standard JCPDS card no 00–020–0348, and it exhibits the rhombohedral structure along with space group R3c (161). The phosphate (PO4)3-group absorption band was observed at 990–1100 cm-1 in FTIR. Surface morphology (TEM analysis) reveals particle sizes in the range of 55–110 nm. The luminescence emission spectra of Ca7Mg2P6O24 phosphor activated by Tb3+ were studied at three different excitations: 352 nm, 370 nm, and 379 nm. The spectra show two emission peaks at 470 nm (blue) and 545 nm (green). These are due to the 5D4 → 7F6 and 5D4 → 7F5 transitions of Tb3+ ions. The highest intensity peak is located at 545 nm. The Ca7Mg2P6O24:Tb3+ phosphor's CIE chromaticity coordinates are (0.040, 0.316) at 491 nm and (0.265, 0.724) at 543 nm. These are in the blue and green areas on the edges of the CIE diagram, respectively. The photoluminescence emission spectra of Dy3+-doped Ca7Mg2P6O24 phosphor show two significant emission peaks located at 482 nm and 574 nm. These are caused by the 4F9/2 → 5H15/2 and 4F9/2 → 6H13/2 transitions of Dy3+ ions, which produce blue and yellow light, respectively, with an excitation wavelength of 350 nm. The sharp peak position at 482 nm produces the strongest emission. The effect of concentration quenching in between the Dy3+-Dy3+ions and Tb3+-Tb3+ ions is due to dipole-dipole interaction. The CIE color coordinate is found to be (0.082, 0.156) at 482 nm and (0.471, 0.527) at 574 nm which lies in blue and yellow border of CIE diagram. The lifespan of Tb3+, Dy3+activated Ca7Mg2P6O24 nanophosphor of highest concentration is found to be 1.917 ms and 0.9985 ms respectively. On investigation, the synthesized Tb3+, Dy3+activated Ca7Mg2P6O24 nanophosphor can be potential for solid lightning devices & other display application.
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- 2024
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5. Shelf Life Enhancement of Structured Lipids Rich in Omega‑3 Fatty Acids Using Rosemary Extract: A Sustainable Approach
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Priyanka Kumari Singh, Rajni Chopra, Meenakshi Garg, Komal Chauhan, Neha Singh, Snigdha Homroy, Aparna Agarwal, Awdhesh Kumar Mishra, Madhu Kamle, Dipendra Kumar Mahato, and Abhishek Dutt Tripathi
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Chemistry ,QD1-999 - Published
- 2024
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6. Microwave-Assisted Synthesis of Functionalized Carbon Nanospheres Using Banana Peels: pH-Dependent Synthesis, Characterization, and Selective Sensing Applications
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Tavishi Chopra and Raman Parkesh
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Chemistry ,QD1-999 - Published
- 2024
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7. Sustainable biosurfactant production from secondary feedstock—recent advances, process optimization and perspectives
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Yahui Miao, Ming Ho To, Muhammad Ahmar Siddiqui, Huaimin Wang, Sofie Lodens, Shauhrat S. Chopra, Guneet Kaur, Sophie L. K. W. Roelants, and Carol Sze Ki Lin
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glycolipid ,valorization ,biorefinery ,biosurfactant ,sustainability ,secondary feedstock ,Chemistry ,QD1-999 - Abstract
Biosurfactants have garnered increased attention lately due to their superiority of their properties over fossil-derived counterparts. While the cost of production remains a significant hurdle to surpass synthetic surfactants, biosurfactants have been anticipated to gain a larger market share in the coming decades. Among these, glycolipids, a type of low-molecular-weight biosurfactant, stand out for their efficacy in reducing surface and interfacial tension, which made them highly sought-after for various surfactant-related applications. Glycolipids are composed of hydrophilic carbohydrate moieties linked to hydrophobic fatty acid chains through ester bonds that mainly include rhamnolipids, trehalose lipids, sophorolipids, and mannosylerythritol lipids. This review highlights the current landscape of glycolipids and covers specific glycolipid productivity and the diverse range of products found in the global market. Applications such as bioremediation, food processing, petroleum refining, biomedical uses, and increasing agriculture output have been discussed. Additionally, the latest advancements in production cost reduction for glycolipid and the challenges of utilizing second-generation feedstocks for sustainable production are also thoroughly examined. Overall, this review proposes a balance between environmental advantages, economic viability, and societal benefits through the optimized integration of secondary feedstocks in biosurfactant production.
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- 2024
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8. Structure analysis and molecular docking studies of laccase from 'Bacillus licheniformis NS2324'
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Navleen Kaur Chopra, Divya Singhal, Ribhav Saini, and Sonica Sondhi
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Bacillus licheniformis ,Homology modeling ,Structure prediction ,Laccase ,Chemistry ,QD1-999 ,Environmental technology. Sanitary engineering ,TD1-1066 - Abstract
Laccase in prokaryotes have enormous application as biocatalysts. Nevertheless, very few laccases have been characterized structurally till date. Recently, a prokaryotic laccase from“Bacillus licheniformis NS2324” have been was cloned and expresses in E. coli. The present research was focused on in silicostructure prediction and characterization of cloned laccase gene isolated from “B. licheniformisNS2324”.In this study various homology modeling servers were used to predict the protein structure of the cloned laccase. Total 17 models were predicted with servers like SWISS-MODEL, ModWeb, Geno3D,I-TASSER,HHPRED using different template structures. All of these models were further validated through PROTSAV, PROCHECK and SAVES server.The best scoring model predicted by SWISS MODEL was selected and submitted in PMDB database. Selected and submitted protein structure was used further for in silico protein structure characterization and docking studies on leather dyes. It was found that all the 33 tested acid leather dyes were docked perfectly to laccase structure with good binding affinity. Acid orange 56 was having highest affinity of − 9.6 kcal mol−1for binding site. A binding affinity of − 9.3 kcal mol−1 and − 9.2 kcal mol−1 was achieved by docking acid red 97 and acid yellow 110 with laccase respectively. The docking studies were further validated by wet laboratory dye decolorization studies which showed a maximum of 96.26 ± 2.51% of (acid orange 56) and a minimum of 61.87 ± 1.30% (acid red 18) This is, to the best of our knowledge, the first study that reports model building from extracellular B. licheniformis laccase and docking with acid leather dyes.
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- 2023
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9. Temporary pause in the growth of atmospheric ethane and propane in 2015–2018
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H. Angot, C. Davel, C. Wiedinmyer, G. Pétron, J. Chopra, J. Hueber, B. Blanchard, I. Bourgeois, I. Vimont, S. A. Montzka, B. R. Miller, J. W. Elkins, and D. Helmig
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Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
Atmospheric non-methane hydrocarbons (NMHCs) play an important role in the formation of secondary organic aerosols and ozone. After a multidecadal global decline in atmospheric mole fractions of ethane and propane – the most abundant atmospheric NMHCs – previous work has shown a reversal of this trend with increasing atmospheric abundances from 2009 to 2015 in the Northern Hemisphere. These concentration increases were attributed to the unprecedented growth in oil and natural gas (O&NG) production in North America. Here, we supplement this trend analysis building on the long-term (2008–2010; 2012–2020) high-resolution (∼3 h) record of ambient air C2–C7 NMHCs from in situ measurements at the Greenland Environmental Observatory at Summit station (GEOSummit, 72.58 ∘ N, 38.48 ∘ W; 3210 m above sea level). We confirm previous findings that the ethane mole fraction significantly increased by +69.0 [+47.4, +73.2; 95 % confidence interval] ppt yr−1 from January 2010 to December 2014. Subsequent measurements, however, reveal a significant decrease by −58.4 [−64.1, −48.9] ppt yr−1 from January 2015 to December 2018. A similar reversal is found for propane. The upturn observed after 2019 suggests, however, that the pause in the growth of atmospheric ethane and propane might only have been temporary. Discrete samples collected at other northern hemispheric baseline sites under the umbrella of the NOAA cooperative global air sampling network show a similar decrease in 2015–2018 and suggest a hemispheric pattern. Here, we further discuss the potential contribution of biomass burning and O&NG emissions (the main sources of ethane and propane) and conclude that O&NG activities likely played a role in these recent changes. This study highlights the crucial need for better constrained emission inventories.
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- 2021
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10. Heparan Sulfate Proteoglycans as Attachment Factor for SARS-CoV‑2
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Lin Liu, Pradeep Chopra, Xiuru Li, Kim M. Bouwman, S. Mark Tompkins, Margreet A. Wolfert, Robert P. de Vries, and Geert-Jan Boons
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Chemistry ,QD1-999 - Published
- 2021
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11. In Vitro and In Silico Characterization of Curcumin-Loaded Chitosan–PVA Hydrogels: Antimicrobial and Potential Wound Healing Activity
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Hitesh Chopra, Shabana Bibi, Yugal Kishore Mohanta, Tapan Kumar Mohanta, Sandeep Kumar, Inderbir Singh, Muhammad Saad Khan, Pradipta Ranjan Rauta, Abdulrahman Alshammari, Metab Alharbi, and Abdullah F. Alasmari
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curcumin ,hydrogels ,natural products ,molecular characterization ,antimicrobial potential ,Science ,Chemistry ,QD1-999 ,Inorganic chemistry ,QD146-197 ,General. Including alchemy ,QD1-65 - Abstract
Curcumin has been used in traditional medicine forages. The present study aimed to develop a curcumin-based hydrogel system and assess its antimicrobial potential and wound healing (WH) activity on an invitro and in silico basis. A topical hydrogel was prepared using chitosan, PVA, and Curcumin in varied ratios, and hydrogels were evaluated for physicochemical properties. The hydrogel showed antimicrobial activity against both gram-positive and gram-negative microorganisms. In silico studies showed good binding energy scores and significant interaction of curcumin components with key residues of inflammatory proteins that help in WH activity. Dissolution studies showed sustained release of curcumin. Overall, the results indicated wound healing potential of chitosan–PVA–curcumin hydrogel films. Further in vivo experiments are needed to evaluate the clinical efficacy of such films for wound healing.
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- 2023
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12. Exploring the Role of Consecutive Addition of Nitrogen Atoms on Stability and Reactivity of Hydrogen-Bonded Azine–Water Complexes
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Neha Chopra, Geetanjali Chopra, and Damanjit Kaur
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Chemistry ,QD1-999 - Published
- 2019
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13. Optimization and ecofriendly synthesis of iron oxide nanoparticles as potential antioxidant
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Kuldeep Singh, Dimple Sethi Chopra, Dhandeep Singh, and Nirmal Singh
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Iron oxide nanoparticles ,Box-Behnken design ,Antioxidants ,Coriander ,Green synthesis ,Chemistry ,QD1-999 - Abstract
The present study involves the use of Box-Behnken design for optimization of the energy-efficient process variables, eco-friendly synthesis of nanoparticles of iron oxide using Coriandrum sativum L. (cilantro) leaf extract. The factors, which significantly influenced mean nanoparticle size, surface charge, and size distribution, were the volume of leaf extract, agitation speed, and temperature. The developed model using Box-Behnken design was validated by synthesizing the iron nanoparticles using optimized operational conditions i.e. 10 ml volume of leaf extract, 1500 rpm agitation speed and 30 °C temperature. This resulted in the formation of highly stable iron oxide nanoparticles with mean particle size 161.5 nm and polydispersity index 0.132 with a zeta potential of −19.5 mV. The free radical inhibitory activity of prepared iron oxide nanoparticles was found comparable to ascorbic acid. These results reveal that iron nanoparticles for a biomedical application can be prepared at ambient temperature in an eco-friendly manner.
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- 2020
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14. Accurate Prediction of Inhibitor Binding to HIV-1 Protease Using CANDOCK
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Zackary Falls, Jonathan Fine, Gaurav Chopra, and Ram Samudrala
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molecular docking ,inhibitor prediction ,protein–ligand interaction ,HIV-1 protease ,knowledge-based force field ,CANDOCK ,Chemistry ,QD1-999 - Abstract
The human immunodeficiency virus 1 (HIV-1) protease is an important target for treating HIV infection. Our goal was to benchmark a novel molecular docking protocol and determine its effectiveness as a therapeutic repurposing tool by predicting inhibitor potency to this target. To accomplish this, we predicted the relative binding scores of various inhibitors of the protease using CANDOCK, a hierarchical fragment-based docking protocol with a knowledge-based scoring function. We first used a set of 30 HIV-1 protease complexes as an initial benchmark to optimize the parameters for CANDOCK. We then compared the results from CANDOCK to two other popular molecular docking protocols Autodock Vina and Smina. Our results showed that CANDOCK is superior to both of these protocols in terms of correlating predicted binding scores to experimental binding affinities with a Pearson coefficient of 0.62 compared to 0.48 and 0.49 for Vina and Smina, respectively. We further leveraged the Database of Useful Decoys: Enhanced (DUD-E) HIV protease set to ascertain the effectiveness of each protocol in discriminating active versus decoy ligands for proteases. CANDOCK again displayed better efficacy over the other commonly used molecular docking protocols with area under the receiver operating characteristic curve (AUROC) of 0.94 compared to 0.71 and 0.74 for Vina and Smina. These findings support the utility of CANDOCK to help discover novel therapeutics that effectively inhibit HIV-1 and possibly other retroviral proteases.
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- 2022
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15. Nature and Hierarchy of Hydrogen-Bonding Interactions in Binary Complexes of Azoles with Water and Hydrogen Peroxide
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Neha Chopra, Damanjit Kaur, and Geetanjali Chopra
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Chemistry ,QD1-999 - Published
- 2018
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16. Biophysical Characterization and Drug Delivery Potential of Exosomes from Human Wharton’s Jelly-Derived Mesenchymal Stem Cells
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Neha Chopra, Braham Dutt Arya, Namrata Jain, Poonam Yadav, Saima Wajid, Surinder P. Singh, and Sangeeta Choudhury
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Chemistry ,QD1-999 - Published
- 2019
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17. Metabolic Derangements in Patients of Psoriasis and their Association with Psoriasis Area Severity Index Score: A Cross-sectional Study
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Seema Goel, Shalini Bansal, Dimple Chopra, and Jayati Batra
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c-reactive protein ,fasting blood sugar ,lipid profile ,uric acid ,Microbiology ,QR1-502 ,Chemistry ,QD1-999 - Abstract
Introduction: Psoriasis is a chronic inflammatory disease of skin associated with various metabolic derangements. These metabolic derangements increases the risk of cardiovascular diseases in psoriatic patients. Aim: To study the metabolic parameters- Fasting Blood Glucose (FBS), serum lipid profile, serum uric acid, C-Reactive Protein (CRP) in psoriatic patients in relation to clinical disease severityPsoriasis Area Severity Index (PASI) score. Materials and Methods: The study was a hospital based cross-sectional observational study carried out over a period of 18 months in Department of Dermatology at Government Medical College and Rajindra Hospital, Patiala that included 250 psoriatic patients. Their percentage Body Surface Area (BSA) involved and PASI score were calculated as per the standard guidelines. The severity of psoriasis was divided into mild (PASI12) disease based on PASI score. Serum lipid profile was measured by enzymatic method, blood glucose by glucose oxidase method, serum uric acid by uricase method and CRP by latex slide agglutination method and the values obtained were compared with severity of psoriasis. Results: There was a rise in the value of FBS, serum lipid profile, serum uric acid and CRP as PASI score increased and the difference between these values was statistically highly significant (p-value
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- 2021
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18. Antiviral Essential Oil Components Against SARS-CoV-2 in Pre-procedural Mouth Rinses for Dental Settings During COVID-19: A Computational Study
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Pradeep Kumar Yadalam, Kalaivani Varatharajan, K. Rajapandian, Priyanka Chopra, Deepavalli Arumuganainar, Thilgavathi Nagarathnam, Honglae Sohn, and Thirumurthy Madhavan
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COVID-19 ,SARS-CoV-2 ,pre-procedural mouth rinse ,antiviral ,dental ,molecular docking ,Chemistry ,QD1-999 - Abstract
COVID-19 mainly spreads through cough or sneeze droplets produced by an infected person. The viral particles are mostly present in the oral cavity. The risk of contracting COVID-19 is high in the dental profession due to the nature of procedures involved that produce aerosols. Along with other measures to limit the risk of infection, pre-procedural mouth rinses are beneficial in reducing the viral particles in the oral cavity. In this study, the antiviral efficacy of essential oil components has been determined specifically against SARS-CoV-2 by molecular docking and conceptual DFT approach. Based on the binding affinities of the components against the receptor binding domain of the S1 glycoprotein, cuminal, carvacrol, myrtanol, and pinocarveol were found to be highly active. The molecular descriptor values obtained through conceptual DFT also indicated the above-mentioned components to be active based on the correlation between the structure and the activity of the compounds. Therefore, pre-procedural mouth rinses with these components included may be specifically suitable for dental procedures during the COVID-19 period.
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- 2021
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19. Preparation and Evaluation of Chitosan/PVA Based Hydrogel Films Loaded with Honey for Wound Healing Application
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Hitesh Chopra, Shabana Bibi, Sandeep Kumar, Muhammad Saad Khan, Pradeep Kumar, and Inderbir Singh
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hydrogel films ,chitosan/PVA ,honey ,wound healing ,Science ,Chemistry ,QD1-999 ,Inorganic chemistry ,QD146-197 ,General. Including alchemy ,QD1-65 - Abstract
In the present study, chitosan/polyvinyl alcohol (PVA)-based honey hydrogel films were developed for potential wound healing application. The hydrogel films were developed by a solvent-casting method and were evaluated in terms of thickness, weight variation, folding endurance, moisture content and moisture uptake. The water vapor transmission rate was found to range between 1650.50 ± 35.86 and 2698.65 ± 76.29 g/m2/day. The tensile strength and elongation at break were found to range between 4.74 ± 0.83 and 38.36 ± 5.39 N, and 30.58 ± 3.64 and 33.51 ± 2.47 mm, respectively, indicating significant mechanical properties of the films. SEM images indicated smooth surface morphology of the films. FTIR, DSC and in silico analysis were performed, which highlighted the docking energies of the protein–ligand complex and binding interactions such as hydrogen bonding, Pi–Pi bonding, and Pi–H bonding between the selected compounds and target proteins; hence, we concluded, with the three best molecules (lumichrome, galagin and chitosan), that there was wound healing potential. In vitro studies pointed toward a sustained release of honey from the films. The antimicrobial performance of the films was investigated against Staphylococcus aureus. Overall, the results signaled the potential application of chitosan/PVA based hydrogel films as wound dressings. Furthermore, in vivo experiments may be required to evaluate the clinical efficacy of honey-loaded chitosan/PVA hydrogel films in wound healing.
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- 2022
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20. Iatrogenic intrathoracic encapsulated siliconoma from a ruptured breast implant
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Christina Shree Chopra, Fernando A. Herrera, Ahmed Suliman, and Patricia A. Thistlethwaite
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medicine.medical_specialty ,medicine.medical_treatment ,Breast Implants ,Mammaplasty ,Iatrogenic Disease ,law.invention ,Silicone Gels ,chemistry.chemical_compound ,Silicone ,law ,medicine ,Humans ,Thoracotomy ,Breast augmentation ,Breast Implantation ,business.industry ,Thoracic cavity ,General Medicine ,Capsular contracture ,Middle Aged ,Surgery ,medicine.anatomical_structure ,chemistry ,Cardiothoracic surgery ,Breast implant ,Female ,Implant ,business - Abstract
Our patient was a 57-year-old woman with a history of bilateral retropectoral silicone breast augmentation and axillary hyperhidrosis who underwent a bilateral thoracic sympathectomy via video-assisted thoracoscopic surgery by a surgeon at an outside hospital approximately 20 years ago. The left side required an open thoracotomy. Shortly after the surgery, she developed a left-sided Baker 4 capsular contracture and the left implant was noted to be ruptured. Both implants were exchanged. Several years later the patient began to experience progressive fatigue. Work-up revealed a left lung nodule and she underwent a biopsy that confirmed silicone granulomas. It was hypothesised that at the time of her initial thoracotomy the implant was violated resulting in silicone spillage into the thoracic cavity. The patient was referred to our institution for advanced management of her intrathoracic silicosis. The patient underwent bilateral removal of her silicone implants, total capsulectomy and needle-localised removal of her left thoracic silicone masses. She had an uneventful postoperative course with resolution of her fatigue.
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- 2023
21. Development and Characterization of Sodium Alginate Beads for Metformin
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Hitesh Chopra
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Chemistry ,QD1-999 - Abstract
The metformin is anti diabetic drug. In this study the sodium alginate beads were prepared with different oils preparing emulsion first. The drug is entrapped and measured for its drug content and swelling index. The beads were prepared and evaluated on different parameters.
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- 2019
22. Chaotic Evolutionary Programming for an Engineering Optimization Problem
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Nirbhow Jap Singh, Shakti Singh, Vikram Chopra, Mohd Asim Aftab, S. M. Suhail Hussain, and Taha Selim Ustun
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chaotic evolutionary programming ,Gauss map ,Powell’s pattern search ,robustness test ,tent map ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
The aim of the current paper is to present a mimetic algorithm called the chaotic evolutionary programming Powell’s pattern search (CEPPS) algorithm for the solution of the multi-fuel economic load dispatch problem. In the CEPPS algorithm, the exploration process is maintained by chaotic evolutionary programming, whereas exploitation is taken care off by a pattern search. The proposed CEPPS has two variants based on the Gauss map and the tent map. Seven generalized benchmark test functions and six cases of the multi-fuel economic load dispatch problem are considered for the performance analysis. It is observed from the analysis that the CEPPS solution procedure based on the tent map exhibits superiority to obtain an excellent solution and better convergence characteristics than traditional chaotic evolutionary programming. Further, the performance investigation for the considered economic load dispatch shows that the Gauss map CEPPS solution procedure performs better than the tent map based CEPPS to obtain the solution of the multi-fuel economic dispatch problem.
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- 2021
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23. Towards Clinical Translation: Optimized Fabrication of Controlled Nanostructures on Implant-Relevant Curved Zirconium Surfaces
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Divya Chopra, Karan Gulati, and Sašo Ivanovski
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zirconium ,zirconia ,dental implants ,nanopores ,electrochemical anodization ,Chemistry ,QD1-999 - Abstract
Anodization enables fabrication of controlled nanotopographies on Ti implants to offer tailorable bioactivity and local therapy. However, anodization of Zr implants to fabricate ZrO2 nanostructures remains underexplored and are limited to the modification of easy-to-manage flat Zr foils, which do not represent the shape of clinically used implants. In this pioneering study, we report extensive optimization of various nanostructures on implant-relevant micro-rough Zr curved surfaces, bringing this technology closer to clinical translation. Further, we explore the use of sonication to remove the top nanoporous layer to reveal the underlying nanotubes. Nano-engineered Zr surfaces can be applied towards enhancing the bioactivity and therapeutic potential of conventional Zr-based implants.
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- 2021
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24. Bacterial Nanocellulose based Wound Dressings: Current and Future Prospects
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Rupesh K. Gautam, Mohammad Amjad Kamal, Hitesh Chopra, and Shweta Gandhi
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Pharmacology ,Wound Healing ,Materials science ,integumentary system ,Treatment options ,Nanotechnology ,Bandages ,Anti-Bacterial Agents ,Nanocellulose ,Preparation method ,chemistry.chemical_compound ,chemistry ,Bacterial cellulose ,Three dimensional printing ,Wound dressing ,Drug Discovery ,Humans ,Burns ,Cellulose - Abstract
Although there are many treatment options available for wound and burns dressings, improvements in technology are still required. Bacterial cellulose is a polymer derived from the microbiological world and has shown some promising properties that recommend it as a wound healing therapeutic. Moreover, bacterial cellulose can be nanosized to form Bacterial Nanocellulose (BNC), enhancing its properties. Most importantly, in addition to its inherent antibacterial properties, BNC can be used to deliver drugs. This article presents a birds-eye view of the preparation method and applications of BNC-based wound dressings.
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- 2022
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25. Can THF hydrogen bond to glycine as strong as water?
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Kaur, Damanjit, Chopra, Geetanjali, and Kaur, Rajinder
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Glycine -- Chemical properties ,Hydrogen bonding -- Observations -- Chemical properties ,Chemistry - Abstract
Abstract: Hydrogen bond complexation between glycine and THF and between glycine and water involving four lowest-energy glycine conformers have been studied. The complexes have been investigated in the gas phase [...]
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- 2017
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26. Investigation of Plasmid DNA Delivery and Cell Viability Dynamics for Optimal Cell Electrotransfection In Vitro
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Sonam Chopra, Paulius Ruzgys, Martynas Maciulevičius, Milda Jakutavičiūtė, and Saulius Šatkauskas
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plasmid ,DNA ,electroporation ,electrotransfection ,cell viability ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
Electroporation is an effective method for delivering plasmid DNA molecules into cells. The efficiency of gene electrotransfer depends on several factors. To achieve high transfection efficiency while maintaining cell viability is a tedious task in electroporation. Here, we present a combined study in which the dynamics of both evaluation types of transfection efficiency and the cell viability were evaluated in dependence of plasmid concentration as well as at the different number of high voltage (HV) electric pulses. The results of this study reveal a quantitative sigmoidal (R2 > 0.95) dependence of the transfection efficiency and cell viability on the distance between the cell membrane and the nearest plasmid. We propose this distance value as a new, more accurate output parameter that could be used in further optimization studies as a predictor and a measure of electrotransfection efficiency.
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- 2020
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27. Serial Assessment of High-Sensitivity Cardiac Troponin and the Effect of Dapagliflozin in Patients With Heart Failure With Reduced Ejection Fraction
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Pardeep S. Jhund, Kieran F. Docherty, Marc S. Sabatine, Eileen O'Meara, Daniel Lindholm, David A. Morrow, John J.V. McMurray, Petr Jarolim, Paul Welsh, Jose C. Nicolau, Naveed Sattar, AM Langkilde, Mikhail Kosiborod, Mikaela Sjöstrand, Vijay K. Chopra, Morten Schou, Ann Hammarstedt, David D. Berg, Inder S. Anand, Rudolf A. de Boer, and Cardiovascular Centre (CVC)
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Male ,medicine.medical_specialty ,BIOMARKERS ,heart failure ,Placebo ,GUIDELINES ,Ventricular Function, Left ,Ventricular Dysfunction, Left ,chemistry.chemical_compound ,Glucosides ,Physiology (medical) ,Internal medicine ,medicine ,Clinical endpoint ,sodium-glucose transporter 2 inhibitors ,Humans ,Benzhydryl Compounds ,Dapagliflozin ,Aged ,Proportional Hazards Models ,Aged, 80 and over ,Clinical Trials as Topic ,Ejection fraction ,business.industry ,troponin ,NATRIURETIC PEPTIDE ,Hazard ratio ,Absolute risk reduction ,Stroke Volume ,clinical trial ,Middle Aged ,medicine.disease ,PROGNOSTIC VALUE ,Quartile ,chemistry ,Heart failure ,Cardiology ,Female ,Cardiology and Cardiovascular Medicine ,business ,Numbers Needed To Treat - Abstract
Background: Circulating high-sensitivity cardiac troponin T (hsTnT) predominantly reflects myocardial injury, and higher levels are associated with a higher risk of worsening heart failure and death in patients with heart failure with reduced ejection fraction. Less is known about the prognostic significance of changes in hsTnT over time, the effects of dapagliflozin on clinical outcomes in relation to baseline hsTnT levels, and the effect of dapagliflozin on hsTnT levels. Methods: DAPA-HF (Dapagliflozin and Prevention of Adverse Outcomes in Heart Failure) was a randomized, double-blind, placebo-controlled trial of dapagliflozin (10 mg daily) in patients with New York Heart Association class II to IV symptoms and left ventricular ejection fraction ≤40% (median follow-up, 18.2 months). hsTnT (Roche Diagnostics) was measured at baseline in 3112 patients and at 1 year in 2506 patients. The primary end point was adjudicated worsening heart failure or cardiovascular death. Clinical end points were analyzed according to baseline hsTnT and change in hsTnT from baseline to 1 year. Comparative treatment effects on clinical end points with dapagliflozin versus placebo were assessed by baseline hsTnT. The effect of dapagliflozin on hsTnT was explored. Results: Median baseline hsTnT concentration was 20.0 (25th–75th percentile, 13.7–30.2) ng/L. Over 1 year, 67.9% of patients had a ≥10% relative increase or decrease in hsTnT concentrations, and 43.5% had a ≥20% relative change. A stepwise gradient of higher risk for the primary end point was observed across increasing quartiles of baseline hsTnT concentration (adjusted hazard ratio Q4 versus Q1, 3.44 [95% CI, 2.46–4.82]). Relative and absolute increases in hsTnT over 1 year were associated with higher subsequent risk of the primary end point. The relative reduction in the primary end point with dapagliflozin was consistent across quartiles of baseline hsTnT ( P -interaction=0.55), but patients in the top quartile tended to have the greatest absolute risk reduction (absolute risk difference, 7.5% [95% CI, 1.0%–14.0%]). Dapagliflozin tended to attenuate the increase in hsTnT over time compared with placebo (relative least squares mean reduction, –3% [–6% to 0%]; P =0.076). Conclusions: Higher baseline hsTnT and greater increase in hsTnT over 1 year are associated with worse clinical outcomes. Dapagliflozin consistently reduced the risk of the primary end point, irrespective of baseline hsTnT levels. Registration: URL: https://www.clinicaltrials.gov ; Unique identifier: NCT03036124.
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- 2022
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28. Synthetic short peptides (SSPs) as antibiofilm agents for dental material applications
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Vishakha Grover, Manjula Mehta, and Priyanka Chopra
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stomatognathic diseases ,Surface coating ,Streptococcus salivarius ,Bacteriocin ,biology ,Chemistry ,Antimicrobial peptides ,Biofilm ,Oral Microflora ,biology.organism_classification ,Antimicrobial ,Microbiology - Abstract
Human oral microflora is one of the most complex microbial communities known. A consistent competitive environment in this niche necessitates the generation of bacteriocins or antimicrobial peptides (AMPs), which play a significant impact on niche ecology by inhibiting the growth of closely related inhabitants. In the current study, draft genomes of oral commensal Streptococcus salivarius strains were analyzed using various bioinformatic tools to design novel short antibiofilm peptides. The antimicrobial potency of peptides was predicted by using AMP database and Bactibase. Novel short peptides were designed, synthesized and evaluated against oral oppurtinistic pathogenic microbes. Synthetic short peptides (SSPs) displayed effective inhibition of biofilm formation by specific oral bacterial strains, indicating their potential applicability as targeted antibiofilm agents for variety of dental material surface coating applications.
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- 2022
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29. Pestilential impacts of battery industry discharged metal waste on human health
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Lalita Chopra and Sahil Randhawa
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inorganic chemicals ,Battery (electricity) ,Pollutant ,Waste management ,chemistry ,Hazardous waste ,Impact assessment ,Source reduction ,Environmental science ,chemistry.chemical_element ,Lithium ,Leaching (agriculture) ,Lithium battery - Abstract
Lithium-ion and lithium-polymer batteries have become dominant in consumer electronic products because of their energy density and product longevity. Li dry-cell can give significantly to sustainable waste as well as potential pollutants that are harmful to human health due to their small size, high rates of removal from buy item here whatever we are previously owned, as well as a, require of the same rigid plan at inherent discarding. To assess hazard assessment, source reduction capability, and dangerous potential about lithium battery worn inside the digital telephone, we used standardized leaching monitoring, Lifecycle Impact Assessment (LCIA), and Hazardous Waste Classification. Diffuse Leon batteries are listed as dangerous by US federal regulations due to their main contents. However, due to high levels of cobalt, copper, and nickel, all lithium batteries tested in California are rated as hazardous. Leached amounts of chromium, lead, and thallium in some of Leon's batteries violated California regulations. However, due to high amounts of cobalt, copper, and nickel, all lithium batteries tested in California are rated as hazardous. Leached amounts of chromium, lead, and thallium in some of Leon's batteries violated California regulations materials.
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- 2022
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30. Synthesis and evaluation of triazole congeners of nitro-benzothiazinones potentially active against drug resistant Mycobacterium tuberculosis demonstrating bactericidal efficacy
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Santosh Kumar Sahoo, Mohammad Naiyaz Ahmad, Grace Kaul, Srinivas Nanduri, Arunava Dasgupta, Sidharth Chopra, and Venkata Madhavi Yaddanapudi
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Pharmacology ,Chemistry ,Organic Chemistry ,Drug Discovery ,bacteria ,Pharmaceutical Science ,Molecular Medicine ,respiratory system ,biochemical phenomena, metabolism, and nutrition ,bacterial infections and mycoses ,Biochemistry - Abstract
With growing concerns regarding target residue mutation hovering over established anti-TB pharmacophores, it is imperative to have reserve chemotypes at our disposal to curb unrestrained spread of tuberculosis. In this context, we herein present the synthesis and bio-evaluation of a library of new nitrobenzothiazinone (BTZ) congeners comprising 2-mercapto/amino-benzothiazinone tethered 1,2,3-triazole hybrids as antitubercular agents. In preliminary screening, 10 out of 37 compounds displayed substantial in vitro potency against Mtb H37Rv (MIC 0.5–8 μg mL(−1)). Structural optimization of the initial hit 5o (MIC 0.5 μg mL(−1)) led to identification of linker variants 9a, 9b, 9c, and 9d exhibiting potent anti-TB activity (MIC 0.03–0.12 μg mL(−1)). When tested against Vero cells to determine their selectivity index (SI), these compounds displayed no appreciable cytotoxicity (SI >80). Further studies on activity against drug resistant (DR) Mtb indicated these compounds to be equally potent (MIC 0.03–0.25 μg mL(−1)). The in silico covalent docking study suggested a similar polar interaction to that of PBTZ169 with an additional and contrasting side chain interaction at the active site of Mtb DprE1 target protein. Further, the time kill kinetic study found compounds 9a and 9d to be demonstrating bactericidal efficacy, completely eliminating bacilli in 7 days at 10× MIC. The most promising compound 9d, considering its potent anti-TB activity (MIC 0.06 μg mL(−1) against drug susceptible Mtb and MIC 0.06–0.25 μg mL(−1) against DR Mtb) along with a broad therapeutic index (SI >640) demonstrating a comparable concentration dependent bactericidal efficacy to that of RIF, holds a significant edge to be translated into a potent anti-Mtb agent.
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- 2022
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31. Extraction of cellulosic fibers from the natural resources: A short review
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Manikanika and Lalita Chopra
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Microbial cellulose ,Cellulose fiber ,chemistry.chemical_compound ,Cellulosic ethanol ,Chemistry ,Extraction (chemistry) ,food and beverages ,Biomass ,Biodegradation ,Cellulose ,Pulp and paper industry ,Husk - Abstract
Cellulosic fiber or cellulosic biomass finds major role in the modern scientific era. The cellulosic fibers were well utilized in today’s research due to the unique properties of cellulose such as its biocompatibility, biodegradability, non-toxic etc. Nature is the major sources of cellulose along with some minor sources such as microbial cellulose (fungal, bacterial, algal etc.). One of the major research areas today is to extract cellulose from natural resources abundant with us such as rice husk, wheat husk, maize husk, pine needles, cotton, jute etc. Cellulose can be extract from these available sources by numerous chemicals, mechanical and green techniques. Cellulose extraction can be carried out at nano, micro or macro scale by the processes like alkalization, bleaching, acidic hydrolysis etc. Extracted cellulosic fiber was analyzed by different analysis techniques such as X-Ray Diffraction (XRD), Fourier transform infra-red (FTIR) etc. The present review article represents the importance of the waste biomass to be a useful resource for the extraction of cellulose.
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- 2022
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32. Major application and impact after modified bituminous with Nitrile rubber and Thermoset: An analysis
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Avani Chopra and Sandeep Singh
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Materials science ,Nitrile ,Thermosetting polymer ,Epoxy ,engineering.material ,chemistry.chemical_compound ,chemistry ,Asphalt ,visual_art ,Filler (materials) ,Bakelite ,Ultimate tensile strength ,visual_art.visual_art_medium ,engineering ,Composite material ,Nitrile rubber - Abstract
India is emerging as an automobile hub and has adequate production capacity of nitrile to cater to the present demand. However with the passage of time huge waste of nitrile is likely to be created which may become a major problem for its disposal. Nitrile has certain unique properties which are suitable for the road surface viz. resistant to oil, resistant to fuels, resistant to acids, high tensile strength etc. Some research has been carried out using nitrile in bitumen and the results have been encouraging. So far research has only been carried out using Nitrile rubber with different grades of bitumen.Now thermosets namely Bakelite, Furan Resin & Epoxy Resin have been used as a partial replacement of bitumen. In this research a 81 combination of Nitrile Rubber and Thermosets (Bakelite, Furan Resin & Epoxy Resin) shall be replaced with bitumen to prepared a Modified Bituminous Mix, whose properties was studied upon.To determine the optimum bitumen content (OBC) of mixes and to predict different Marshall requirements, the Marshall test is easy, economical, and widely available: Marshall consistency, flow value, air voids, mineral aggregate voids, and bitumen filled voids 5 percent, 5.5 percent, 6 percent, 6.5 percent for each of three styles of moulds were observed under 81 thermoset variations. We observed Indirect Tensile (IDT) Strength and TSR with unconditioned and conditioned would be enhanced after equal distribution of Nitrile Rubber and Thermosets (Bakelite, Furan Resin & Epoxy Resin as filler in modified bituminous . The testresults indicated that addition of Nitrile Rubber and Thermosets (Bakelite, Furan Resin & Epoxy Resin as filler remarkably improves the engineering properties of both mixes considered.
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- 2022
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33. Comprehensive study of synthetic tool for ZnO based nanoparticles
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Anurag Pundir and Lalita Chopra
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Materials science ,Imaging Tool ,Biocompatibility ,chemistry ,Zno nanoparticles ,Human life ,Nanoparticle ,chemistry.chemical_element ,Nanotechnology ,Zinc ,Hydrothermal circulation ,Characterization (materials science) - Abstract
Zinc oxide (ZnO) nanoparticles, because of the reality of their biocompatibility are utilized for biomedical applications. The modern technique-based characterization is needed to find out the pharmacology and biological impact of ZnO nanoparticles. Further, these techniques also help to check the biological and toxic levels of ZnO particles. These nanoparticles to maximize their performance can be folded up in a 3-D structure and also have a different range of shapes. ZnO nanoparticles are utilized in many technical devices like sensor and imaging tool devices. ZnO nanoparticles have various useful activities in human life. ZnO nanoparticles also have the application to help in the healing of a wound. ZnO nanoparticles have healing activity against diabetes and cancer. ZnO particles are formed by various methods, like the sol–gel method, hydrothermal method, and by green method. Zinc oxide nanoparticles are also produced by natural method from plant leaf of Sambucus ebulcus and their physiochemical important findings are further examined for use. The X-ray [radiation mediated] diffraction observation, shown that ZnO nanoparticles are highly crystallized. The dimensions of prepared ZnO nanoparticles are observed differently in different conditions. Further, there are large numbers of techniques for the production of ZnO nanoparticles.
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- 2022
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34. Natural prokaryotic antimicrobial peptide coated titanium discs prevent Staphylococcus auerus growth and biofilm formation – Implications on peri-implant infections
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Priyanka Chopra, Vishakha Grover, and Manjula Mehta
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Chemistry ,Antimicrobial peptides ,Biofilm ,Biomaterial ,chemistry.chemical_element ,medicine.disease_cause ,Antimicrobial ,Microbiology ,chemistry.chemical_compound ,Surface coating ,medicine ,Crystal violet ,Staphylococcus ,Titanium - Abstract
Staphylococcus auerus (S. aureus) biofilms are a frequently associated cause of artificial implant infections and failures. Surface coating of titanium (Ti), a widely used implant biomaterial with antimicrobial agents may appear a promising approach to prevent and reduce the periimplant infections and associated failures. Natural antimicrobial peptides (AMPs) viz laterosporulins (LS) from soil bacteria Brevibacillus spp. were bound on titanium (Ti) substrates using a simple, time and cost effective chemical processing technique. Resistance of the AMP coated Ti substrates against biofilm formation of the bacterium S. aureus was determined by crystal violet staining, in vitro. Further the antibiofilm activity was visualized in replicate experiments on Hydroxyapatite (HA) discs also to simulate enamel surfaces consistently layered by saliva in oral cavity to ascertain the biofilm inhibition assessment. AMP coated Ti substrates showed marked reduction in the biofilm formation by S. aureus, in vitro compared against the control-Ti surfaces. Further, Coated HA discs also substantiated the findings in a similar trend compared with control-Ti substrates. The findings suggested a promising potential for laterosporulins as effective antibiofilm agents for coating titanium surfaces for various applications, including dental implants used in oral cavity.
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- 2022
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35. Unleashing the Potential of Microbial Natural Products in Drug Discovery: Focusing on Streptomyces as Antimicrobials Goldmine
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Sahar Behzad, Bairong Shen, Hitesh Chopra, Rajeev K Singla, Ajmer Singh Grewal, and Himangini Bansal
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Biological Products ,2019-20 coronavirus outbreak ,Natural product ,biology ,Drug discovery ,General Medicine ,biology.organism_classification ,Streptomyces ,Natural (archaeology) ,Streptomyces species ,Synthetic biology ,chemistry.chemical_compound ,Anti-Infective Agents ,chemistry ,Drug Discovery ,Screening programs ,Animals ,Humans ,Synthetic Biology ,Business ,Biochemical engineering - Abstract
The natural product specialized metabolites produced by microbes and plants are the backbone of our current drugs. Ironically, we are in a golden age of understanding natural product biosynthesis, biochemistry, and engineering. These advances have the potential to usher in a new era of natural product exploration and development, taking full advantage of the unique and favorable properties of natural product compounds in drug discovery. There is now an increasing realization that these privileged structures represent the optimal starting point for the development of clinically viable assets. Here, we outline the current state-of-the-art in antimicrobial natural product drug discovery, specifically Streptomyces species, with a specific focus on how the emerging field of synthetic biology is delivering the tools and technologies required to unlock the therapeutic potential of natural products. We illustrate how these approaches are circumventing many of the problems that have historically plagued conventional screening programs, enabling the expedient discovery of new molecules with novel functions.
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- 2021
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36. Perfluorocarbons Therapeutics in Modern Cancer Nanotechnology for Hypoxiainduced Anti-tumor Therapy
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Daljeet Singh Dhanjal, Saurabh Satija, Flavia C. Zacconi, Navneet Khurana, Nitin B Charbe, Murtaza M. Tambuwala, Prabal Sharma, Hamid A. Bakshi, Dinesh Kumar Chellappan, Reena Singh Chopra, Neha Sharma, Manish Vyas, Harpreet Kaur, Meenu Mehta, and Kamal Dua
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Medicinal & Biomolecular Chemistry ,medicine.medical_treatment ,Cell ,Photodynamic therapy ,Cancer nanotechnology ,Microcirculation ,Cell quiescence ,Cell Line, Tumor ,Neoplasms ,Drug Discovery ,Tumor Microenvironment ,medicine ,Humans ,Nanotechnology ,Pharmacology ,chemistry.chemical_classification ,Fluorocarbons ,Reactive oxygen species ,Photosensitizing Agents ,business.industry ,Cancer ,Hypoxia (medical) ,medicine.disease ,medicine.anatomical_structure ,Photochemotherapy ,chemistry ,Cancer research ,Nanoparticles ,1115 Pharmacology and Pharmaceutical Sciences ,medicine.symptom ,business - Abstract
With an estimated failure rate of about 90%, immunotherapies that are intended for the treatment of solid tumors have caused an anomalous rise in the mortality rate over the past decades. It is apparent that resistance towards such therapies primarily occurs due to elevated levels of HIF-1 (Hypoxia-induced factor) in tumor cells, which are caused by disrupted microcirculation and diffusion mechanisms. With the advent of nanotechnology, several innovative advances were brought to the fore; and, one such promising direction is the use of perfluorocarbon nanoparticles in the management of solid tumors. Perfluorocarbon nanoparticles enhance the response of hypoxia-based agents (HBAs) within the tumor cells and have been found to augment the entry of HBAs into the tumor micro-environment. The heightened penetration of HBAs causes chronic hypoxia, thus aiding in the process of cell quiescence. In addition, this technology has also been applied in photodynamic therapy, where oxygen self-enriched photosensitizers loaded perfluorocarbon nanoparticles are employed. The resulting processes initiate a cascade, depleting tumour oxygen and turning it into a reactive oxygen species eventually to destroy the tumour cell. This review elaborates on the multiple applications of nanotechnology based perfluorocarbon formulations that are being currently employed in the treatment of tumour hypoxia.
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- 2021
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37. Short Peptides and Their Mimetics as Potent Antibacterial Agents and Antibiotic Adjuvants
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Sandeep Verma, Grace Kaul, Apurva Panjla, Alexander Titz, and Sidharth Chopra
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Cell Membrane Permeability ,medicine.drug_class ,Antibiotics ,Antimicrobial peptides ,Molecular Conformation ,Peptide ,Context (language use) ,Microbial Sensitivity Tests ,Antibacterial efficacy ,Pharmacology ,Peptides, Cyclic ,Biochemistry ,Structure-Activity Relationship ,Antibiotic resistance ,Adjuvants, Immunologic ,Anti-Infective Agents ,Drug Development ,Biomimetic Materials ,Humans ,Medicine ,Amino Acid Sequence ,Polymyxins ,chemistry.chemical_classification ,business.industry ,General Medicine ,Antimicrobial ,Multiple drug resistance ,chemistry ,Molecular Medicine ,business ,Antimicrobial Cationic Peptides - Abstract
Antimicrobial resistance (AMR) has been increasing unrelentingly worldwide, thus negatively impacting human health. The discovery and development of novel antibiotics is an urgent unmet need of the hour. However, it has become more challenging, requiring increasingly time-consuming efforts with increased commercial risks. Hence, alternative strategies are urgently needed to potentiate the existing antibiotics. In this context, short cationic peptides or peptide-based antimicrobials that mimic the activity of naturally occurring antimicrobial peptides (AMPs) could overcome the disadvantages of AMPs having evolved as potent antibacterial agents. Besides their potent antibacterial efficacy, short peptide conjugates have also gained attention as potent adjuvants to conventional antibiotics. Such peptide antibiotic combinations have become an increasingly cost-effective therapeutic option to tackle AMR. This Review summarizes the recent progress for peptide-based small molecules as promising antimicrobials and as adjuvants for conventional antibiotics to counter multidrug resistant (MDR) pathogens.
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- 2021
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38. Mechanical Integrity in a Dynamic Interpenetrating Hydrogel Network of Supramolecular Peptide–Polysaccharide Supports Enhanced Chondrogenesis
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Jojo P. Joseph, Vianni Chopra, Deepa Ghosh, Jijo Thomas, Asish Pal, and Nidhi Gupta
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Scaffold ,Tissue Engineering ,Chemistry ,technology, industry, and agriculture ,Biomedical Engineering ,Hydrogels ,Chondrogenesis ,Chondrocyte ,Carboxymethyl cellulose ,Biomaterials ,Chondrocytes ,medicine.anatomical_structure ,Tissue engineering ,Nanofiber ,Self-healing hydrogels ,medicine ,Biophysics ,Peptide amphiphile ,Humans ,Peptides ,medicine.drug - Abstract
Tissue engineering demands intelligently designed scaffolds that encompass the properties of the target tissues in terms of mechanical and bioactive properties. An ideal scaffold for engineering a cartilage tissue should provide the chondrocytes with a favorable 3D microarchitecture apart from possessing optimal mechanical characteristics such as compressibility, energy dissipation, strain stiffening, etc. Herein, we used a unique design approach to develop a hydrogel having a dynamic interpenetrating network to serve as a framework to support chondrocyte growth and differentiation. An amyloid-inspired peptide amphiphile (1) was self-assembled to furnish kinetically controlled nanofibers and incorporated in a dynamic covalently cross-linked polysaccharide network of carboxymethyl cellulose dialdehyde (CMC-D) and carboxymethyl chitosan (CMCh) using Schiff base chemistry. The dynamic noncovalent interaction played a pivotal role in providing the desired modulation in the structure and mechanical properties of the double-network hydrogels that are imperative for cartilage scaffold design. The adaptable nature supported shear-induced extrusion of the hydrogel and facilitated various cellular functions while maintaining its integrity. The potential of the as-developed hydrogels to support in vitro chondrogenesis was explored using human chondrocytes. Evidence of improved cell growth and cartilage-specific ECM production confirmed the potential of the hydrogel to support cartilage tissue engineering while reaffirming the significance of mimicking the biophysical microenvironment to induce optimal tissue regeneration.
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- 2021
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39. Tree Turmeric: A Super Food and Contemporary Nutraceutical of 21st Century – A Laconic Review
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Jasleen Kaur Bhasin, Baneet Thakur, Satish Kumar, and Vikas Chopra
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Diarrhea ,Berberis ,Berberine ,Berberis aristata ,Antioxidants ,Trees ,chemistry.chemical_compound ,Curcuma ,Nutraceutical ,Humans ,Hypoglycemic Agents ,Medicine ,Medicinal plants ,Inflammation ,biology ,Traditional medicine ,business.industry ,Water ,Vitamins ,Eye infection ,biology.organism_classification ,Antimicrobial ,Malaria ,chemistry ,Phytochemical ,Dietary Supplements ,business - Abstract
Since ancient times the medicinal plants have been under use as food and potential therapeutic agent for the management of overall health and the use of all plant parts including fruits, seeds, is well reported in the literature. One such plant is Berberis aristata which is rich in vitamins, minerals, and various phytochemicals amongst which Berberine is the principal bioactive compound with a range of reported health benefits, and some of the commercial formulations like Rasaut, Darvyadi Leha are being used for the treatments of jaundice, malaria, typhoid fever, inflammation, eye infection, diarrhea, wound healing, etc. The hepatoprotective, antidiabetic, antitumor, anti-cancerous, properties are the recent additions to its functional importance. Berberine has significant bioactivities in the treatments of different diseases. Besides its remarkable applications, the berberine has low efficacy due to its low solubility in water, poor absorption, and low bioavailability. This problem can be solved by using some techniques like Nanotechnology which has been found to increase its solubility in water, bioavailability, and absorption and hence provide a better delivery system of berberine. This review illuminates the therapeutic applications of the plant Berberis aristata, scientific validation to its traditional uses, role of berberine in the treatment of various diseases through its different bioactivities, major flaws in berberine treatment, and the role of nanotechnology in minimizing those flaws and increasing its overall efficacy. Key teaching pointsPlant Berberis aristata has been used since ancient times for the treatment of various ailments like jaundice, hepatitis, fever, bleeding, inflammation, diarrhea, malaria, skin and eye infections, chronic rheumatism, and urinary disorders.Berberine is the major and most significant phytochemical among numerous phytochemicals present in plant Berberis aristata.Berberine has significantly shown many potent effect against emerging diseases like cancer and diabetes. Besides that, it has also shown antioxidant, anti-inflamation, antimicrobial, hepatoprotective, and anti-gastrointestinal disorder properties.Berberine can be very effective in overcoming the demerits of berberine treatment like poor aqueous solubility, low bioavailability, and poor absorption in the human body in the treatment of various diseases.
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- 2021
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40. Sialic acid-containing glycolipids mediate binding and viral entry of SARS-CoV-2
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Shang-Te Danny Hsu, Gour Chand Daskhan, Linh Nguyen, Stephen M. Tompkins, Geert-Jan Boons, Elena N. Kitova, Todd L. Lowary, Tzu-Jing Yang, Ling Han, Kelli A. McCord, Mohamed Elaish, Duong T Bui, Robert P. de Vries, Ilhan Tomris, John S. Klassen, Kim M. Bouwman, Andrew Mason, Pradeep Chopra, Lori J. West, Lara K. Mahal, Steven Willows, Tom C. Hobman, Dhanraj Kumawat, Matthew S. Macauley, Afd Chemical Biology and Drug Discovery, Sub Chemical Biology and Drug Discovery, and Chemical Biology and Drug Discovery
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Glycan ,Binding Sites ,biology ,SARS-CoV-2 ,Chemistry ,Sialyltransferase ,viruses ,Cell Biology ,Heparan sulfate ,Ligand (biochemistry) ,Sialic acid ,carbohydrates (lipids) ,chemistry.chemical_compound ,Glycolipid ,Biochemistry ,Viral entry ,Spike Glycoprotein, Coronavirus ,Sialic Acids ,biology.protein ,Humans ,Angiotensin-Converting Enzyme 2 ,Glycolipids ,Molecular Biology ,Neuraminidase - Abstract
Emerging evidence suggests that host glycans influence severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection. Here, we reveal that the receptor-binding domain (RBD) of the spike (S) protein on SARS-CoV-2 recognizes oligosaccharides containing sialic acid (Sia), with preference for monosialylated gangliosides. Gangliosides embedded within an artificial membrane also bind to the RBD. The monomeric affinities (Kd = 100–200 μM) of gangliosides for the RBD are similar to another negatively charged glycan ligand of the RBD proposed as a viral co-receptor, heparan sulfate (HS) dp2–dp6 oligosaccharides. RBD binding and infection of SARS-CoV-2 pseudotyped lentivirus to angiotensin-converting enzyme 2 (ACE2)-expressing cells is decreased following depletion of cell surface Sia levels using three approaches: sialyltransferase (ST) inhibition, genetic knockout of Sia biosynthesis, or neuraminidase treatment. These effects on RBD binding and both pseudotyped and authentic SARS-CoV-2 viral entry are recapitulated with pharmacological or genetic disruption of glycolipid biosynthesis. Together, these results suggest that sialylated glycans, specifically glycolipids, facilitate viral entry of SARS-CoV-2. Mass spectrometric profiling of a glycan library reveals that sialylated glycans, especially sialic acid-containing gangliosides, interact with the RBD of the SARS-CoV-2 spike protein and are involved in ACE2-dependent viral infection.
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- 2021
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41. Delineation of Neuroprotective Effects and Possible Benefits of AntioxidantsTherapy for the Treatment of Alzheimer’s Diseases by Targeting Mitochondrial-Derived Reactive Oxygen Species: Bench to Bedside
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Tanima Bhattacharya, Md. Habibur Rahman, Kuldeep Kumar, Jatin Parashar, Vineet Mittal, Chenmala Karthika, Rokeya Akter, Ghulam Md Ashraf, Vaibhav Walia, Saurabh Bhatia, Ravinder Verma, Deepak Kaushik, Ahmed Al-Harrasi, and Hitesh Chopra
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chemistry.chemical_classification ,Reactive oxygen species ,Antioxidant ,biology ,business.industry ,Amyloid beta ,medicine.medical_treatment ,Neurodegeneration ,Neuroscience (miscellaneous) ,Mitochondrion ,medicine.disease ,medicine.disease_cause ,Neuroprotection ,Cellular and Molecular Neuroscience ,Neurology ,chemistry ,medicine ,biology.protein ,Senile plaques ,business ,Neuroscience ,Oxidative stress - Abstract
Alzheimer’s disease (AD) is considered the sixth leading cause of death in elderly patients and is characterized by progressive neuronal degeneration and impairment in memory, language, etc. AD is characterized by the deposition of senile plaque, accumulation of fibrils, and neurofibrillary tangles (NFTs) which are responsible for neuronal degeneration. Amyloid-β (Aβ) plays a key role in the process of neuronal degeneration in the case of AD. It has been reported that Aβ is responsible for the production of reactive oxygen species (ROS), depletion of endogenous antioxidants, increase in intracellular Ca2+ which further increases mitochondria dysfunctions, oxidative stress, release of pro-apoptotic factors, neuronal apoptosis, etc. Thus, oxidative stress plays a key role in the pathogenesis of AD. Antioxidants are compounds that have the ability to counteract the oxidative damage conferred by ROS. Therefore, the antioxidant therapy may provide benefits and halt the progress of AD to advance stages by counteracting neuronal degeneration. However, despite the beneficial effects imposed by the antioxidants, the findings from the clinical studies suggested inconsistent results which might be due to poor study design, selection of the wrong antioxidant, inability of the molecule to cross the blood–brain barrier (BBB), treatment in the advanced state of disease, etc. The present review insights into the neuroprotective effects and limitations of the antioxidant therapy for the treatment of AD by targeting mitochondrial-derived ROS. This particular article will certainly help the researchers to search new avenues for the treatment of AD by utilizing mitochondrial-derived ROS-targeted antioxidant therapies.
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- 2021
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42. A new approach of microwave treatment to augment the mechanical properties of polymeric materials
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Kartik Rathod, Pritamkumar S. Tupe, Abhay D. Deshmukh, Kanchan Zine, Kavita Pande, Dilip Peshwe, and Swamini Chopra
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chemistry.chemical_classification ,Radiation processing ,Materials science ,Polymers and Plastics ,chemistry ,Materials Chemistry ,Nanotechnology ,General Chemistry ,Polymer ,Augment ,Microwave - Published
- 2021
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43. Dissipation behaviour of bifenthrin in water at different pH levels under laboratory conditions
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K. C. Patel, Indu Chopra, P. G. Shah, Premlata Meena, Kapil A. Chobhe, and Chaudhary Radhaben Viraji
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Pesticide residue ,Chemistry ,Health, Toxicology and Mutagenesis ,Bifenthrin ,Public Health, Environmental and Occupational Health ,Soil Science ,Dissipation ,Pollution ,Analytical Chemistry ,chemistry.chemical_compound ,Environmental chemistry ,Environmental Chemistry ,Laboratory experiment ,Waste Management and Disposal ,Water Science and Technology - Abstract
A laboratory experiment was conducted at AINP on Pesticide Residues, ICAR Unit - 9, AAU, Anand to study the dissipation behaviour of bifenthrin in water at different pH (4.0, 7.0 and 9.2) at the ra...
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- 2021
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44. Micromechanical characterization and dynamic wear study of DC-Arc coated cemented carbide cutting tools for dry titanium turning
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Dhruv Talwar, Ankush Chopra, Kushaal Singh, Sivanandam Aravindan, Sudarsan Ghosh, and Sarvesh Kumar Mishra
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Materials science ,Process Chemistry and Technology ,Delamination ,chemistry.chemical_element ,Titanium alloy ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Abrasion (geology) ,chemistry ,visual_art ,Physical vapor deposition ,Materials Chemistry ,Ceramics and Composites ,visual_art.visual_art_medium ,Cemented carbide ,Ceramic ,Composite material ,Elastic modulus ,Titanium - Abstract
The present study investigates the micromechanical properties of ceramic coated WC/Co tools and their influence on wear performance during dry Ti6Al4V turning. Physical and micromechanical characterization have been performed for the evaluation of the PVD coating properties. Higher hardness, elastic modulus, and adhesion strength have been obtained for dual-layer (AlTiN/AlCrN) coated tool than monolayer AlTiN and AlCrN coated tools. Micromechanical properties influence the wear mechanisms in thermally activated and abrasion dominant crater zones. Dual-layer coated tools reduced the flank wear at the corner radius and crater wear by 35–50% and 40%, respectively. Dynamic wear and abrasion-dissolution wear mechanisms have been explored over the tool rake face. Dual-layer coatings have improved wear performance by diminishing delamination, micro-fracturing of WC grains, binder dissolution and fractured interface boundaries.
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- 2021
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45. An injectable hydrogel having proteoglycan-like hierarchical structure supports chondrocytes delivery and chondrogenesis
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Monika Mittal, Jijo Thomas, Swati Rajput, Vianni Chopra, Deepa Ghosh, Swati Kaushik, Rajdeep Guha, Naibedya Chattopadhyay, Anjana Sharma, and Vineeta Panwar
- Subjects
Cell Survival ,Biochemistry ,Chondrocyte ,Injections ,Rats, Sprague-Dawley ,Glycosaminoglycan ,chemistry.chemical_compound ,Chondrocytes ,Structural Biology ,Elastic Modulus ,Spectroscopy, Fourier Transform Infrared ,Hyaluronic acid ,medicine ,Animals ,Humans ,Molecular Biology ,Aggrecan ,Cell Proliferation ,Chitosan ,biology ,Cartilage ,Hydrogels ,General Medicine ,Cells, Immobilized ,Chondrogenesis ,Cell biology ,carbohydrates (lipids) ,medicine.anatomical_structure ,Proteoglycan ,chemistry ,Cytoprotection ,Carboxymethylcellulose Sodium ,Self-healing hydrogels ,biology.protein ,Cattle ,Proteoglycans ,Rheology - Abstract
The ECM of cartilage is composed of proteoglycans (PG) that contain glycosaminoglycan (GAG), aggrecan, hyaluronic acid (HA) and other molecular components which play an important role in regulating chondrocyte functions via cell-matrix interactions, integrin-mediated signalling etc. Implantation of chondrocytes encapsulated in scaffolds that mimic the micro-architecture of proteoglycan, is expected to enhance cartilage repair. With an aim to create a hydrogel having macromolecular structure that resembles the cartilage-specific ECM, we constructed a hierarchal structure that mimic the PG. The bottle brush structure of the aggrecan was obtained using chondroitin sulphate and carboxymethyl cellulose which served as GAG and core protein mimic respectively. A proteoglycan-like structure was obtained by cross-linking it with modified chitosan that served as a HA substitute. The physico-chemical characteristics of the above cross-linked injectable hydrogel supported long term human articular chondrocyte subsistence and excellent post-injection viability. The chondrocytes encapsulated in the PMH expressed significant levels of articular cartilage specific markers like collagen II, aggrecan, GAGs etc., indicating the ability of the hydrogel to support chondrocyte differentiation. The biocompatibility and biodegradability of the hydrogels was confirmed using suitable in vivo studies. The results revealed that the PG-mimetic hydrogel could serve as a promising scaffold for chondrocyte implantation.
- Published
- 2021
- Full Text
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46. Co-operative binding of SKP1, Cullin1 and Cullin7 to FBXW8 results in Cullin1-SKP1-FBXW8-Cullin7 functional complex formation that monitors cellular function of β-TrCP1
- Author
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Osheen Sahay, Srikanth Rapole, Radha Chauhan, Parul Dutta, Sehbanul Islam, Manas Kumar Santra, and Kriti Chopra
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Scaffold protein ,Biochemistry ,F-box protein ,Substrate Specificity ,SCF complex ,Cell Movement ,Structural Biology ,Skp1 ,Humans ,FBXW8 ,S-Phase Kinase-Associated Proteins ,Molecular Biology ,beta Catenin ,biology ,Protein Stability ,Chemistry ,F-Box Proteins ,General Medicine ,Cullin Proteins ,beta-Transducin Repeat-Containing Proteins ,Cell biology ,Multiprotein Complexes ,Ubiquitin ligase complex ,Proteolysis ,MCF-7 Cells ,biology.protein ,Cullin ,Function (biology) ,Protein Binding - Abstract
F-box protein FBXW8 is known to interact with scaffolding protein Cullin1 and Cullin7 to form SCF (SKP1, Cullin and F-box protein) complex. However, detail understanding about the importance of both Cullins for SCF-FBXW8 complex formation as well as its ubiquitin ligase activity remains elusive. Here, we show that, through in vitro and in vivo studies, Cullin1 and Cullin7 increase each other's binding to FBXW8 synergistically. Interestingly, absence of either Cullin results in abrogation of binding of other Cullin to FBXW8. Binding of SKP1 to FBXW8 also increases in the presence of both the Cullins. Thus, SKP1, Cullin1 and Cullin7 are essential to form Cullin1-SKP1-FBXW8-Cullin7 functional ubiquitin ligase complex. Further, using computational, mutational and biochemical analysis, we found that Cullin1 binds to N-terminus of FBXW8 through SKP1 while Cullin7 associates with C-terminus of FBXW8 to form Cullin1-SKP1-FBXW8-Cullin7 functional complex in a cooperative manner. Results showed that Cullin1-SKP1-FBXW8-Cullin7 complex plays a key role in maintaining the basal level expression of β-TrCP1. Moreover, Cullin1-SKP1-FBXW8-Cullin7 complex promotes cell migration by activating β-catenin via directing proteasomal degradation of β-TrCP1. Overall, our study reveals the intriguing molecular mechanism of assembly of SKP1, Cullin1, Cullin7 and FBXW8 to form Cullin1-SKP1-FBXW8-Cullin7 functional complex that control the function of β-TrCP1.
- Published
- 2021
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47. Modeling the protein-nucleic acid base interactions through hydrogen-bonded complexes of N-heterocyclic analogs of Indene with amino acid side-chain mimics
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Geetanjali Chopra, Neha Chopra, and Damanjit Kaur
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chemistry.chemical_classification ,Indazole ,010405 organic chemistry ,Stereochemistry ,Hydrogen bond ,Intermolecular force ,Atoms in molecules ,010402 general chemistry ,Condensed Matter Physics ,01 natural sciences ,0104 chemical sciences ,Amino acid ,chemistry.chemical_compound ,chemistry ,Density functional theory ,Physical and Theoretical Chemistry ,Indene ,Natural bond orbital - Abstract
A series of hydrogen-bonded complexes between N-heterocyclic analogs of Indene and amino acid side-chain mimics have been analyzed employing second-order Moller-Plesset perturbation (MP2) theory and density functional theory with dispersion function (DFT-D) calculations with the aim of gaining greater insight in to the nature of intermolecular interactions in these systems. In this study, the hydrogen bonding ability of N-heterocyclic analogs of Indene towards amino acid side-chain mimics follows the sequence Azaindazole (AIND) > Indazole (IND) > Azaindole (AIN) > Indole (IN) whereas the hydrogen bonding ability of amino acid side-chain mimics towards N-heterocyclic analogs of Indene follows the sequence AcOH > MeNH2 > MeOH > MeSH. Bader’s theory of atoms in molecules (AIM) and natural bond orbitals (NBO) analyses are employed to elucidate the interaction characteristics in the complexes under study. The purpose of conducting these studies is to measure the relative strength of hydrogen bonding interactions such as N-H···O=C, N-H···O, N-H···S, N-H···N, and O-H···N in these complexes and their role in providing stability to the complexes. The AIM theory shows good correlation of the electron density and its Laplacian at the bond critical points (BCP) with the computed stabilization energy for all the complexes under study.
- Published
- 2020
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48. Neurotoxic reactive astrocytes induce cell death via saturated lipids
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Prageeth R. Wijewardhane, Maya K. Weigel, Gaurav Chopra, Uriel Rufen-Blanchette, Priya Prakash, Jacob A. Blum, Shane A. Liddelow, Jonathan Fine, Aaron D. Gitler, Mikaela C. Neal, Kimberley D. Bruce, Philip Hasel, Kevin A. Guttenplan, Alexandra E. Münch, and Ben A. Barres
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Apolipoprotein E ,Programmed cell death ,Multidisciplinary ,Chemistry ,Central nervous system ,Neurodegeneration ,Lipid metabolism ,medicine.disease ,In vitro ,Cell biology ,medicine.anatomical_structure ,Toxicity ,medicine ,Astrocyte - Abstract
Astrocytes regulate the response of the central nervous system to disease and injury and have been hypothesized to actively kill neurons in neurodegenerative disease1–6. Here we report an approach to isolate one component of the long-sought astrocyte-derived toxic factor5,6. Notably, instead of a protein, saturated lipids contained in APOE and APOJ lipoparticles mediate astrocyte-induced toxicity. Eliminating the formation of long-chain saturated lipids by astrocyte-specific knockout of the saturated lipid synthesis enzyme ELOVL1 mitigates astrocyte-mediated toxicity in vitro as well as in a model of acute axonal injury in vivo. These results suggest a mechanism by which astrocytes kill cells in the central nervous system. Astrocytes can respond to diseases and injuries of the central nervous system by driving the death of neurons and mature oligodendrocytes through the delivery of long-chain saturated fatty acids contained in lipoparticles.
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- 2021
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49. Bio-evaluation of fluoro and trifluoromethyl-substituted salicylanilides against multidrug-resistant S. aureus
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Abdul Akhir, Grace Kaul, Shabina B. Ansari, Jhajan Lal, Sidharth Chopra, and Damodara N. Reddy
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Vancomycin-resistant Staphylococcus aureus ,medicine.drug_class ,Antibiotics ,Drug repurposing ,Fluorosalicylanilides ,medicine.disease_cause ,Microbiology ,Trifluoromethyl salicylanilides ,chemistry.chemical_compound ,medicine ,General Pharmacology, Toxicology and Pharmaceutics ,Original Research ,Chemistry ,Biofilm ,Organic Chemistry ,Multidrug-resistant S. aureus ,medicine.disease ,Antimicrobial ,Methicillin-resistant Staphylococcus aureus ,Multiple drug resistance ,Salicylanilide ,Antibacterial ,Staphylococcus aureus ,Vancomycin ,Drug synergism ,medicine.drug - Abstract
Methicillin-resistant Staphylococcus aureus (MRSA) and vancomycin-resistant Staphylococcus aureus (VRSA) are primary causes of skin and soft tissue infections worldwide. To address the emergency caused due to increasing multidrug-resistant (MDR) bacterial infections, a series of novel fluoro and trifluoromethyl-substituted salicylanilide derivatives were synthesized and their antimicrobial activity was investigated. MIC data reveal that the compounds inhibited S. aureus specifically (MIC 0.25–64 µg/mL). The in vitro cytotoxicity of compounds with MIC
- Published
- 2021
50. Structural Enhancement under X-ray Irradiation in an Octanuclear Uranium-Based 3D Metal–Organic Framework
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Avijit Kumar Paul, Rohit Bhowal, Deepak Chopra, and Nikhil Kumar
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Materials science ,chemistry ,Inorganic chemistry ,chemistry.chemical_element ,General Materials Science ,Metal-organic framework ,General Chemistry ,X ray irradiation ,Uranium ,Condensed Matter Physics - Published
- 2021
- Full Text
- View/download PDF
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