23 results on '"Murauer A"'
Search Results
2. A novel humanized mouse model to study the function of human cutaneous memory T cells in vivo in human skin
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Angelika Stoecklinger, Iris K. Gratz, Eva M. Murauer, Raimund Holly, Daniel J. Campbell, Jutta Horejs-Hoeck, Ariane Benedetti, Maria M. Klicznik, Suraj R Varkhande, Andreas Sir, Roland Reitsamer, Martin Laimer, Laura M Gail, Theresa Neuper, and Michael Rosenblum
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Adult ,CD4-Positive T-Lymphocytes ,Male ,Adoptive cell transfer ,Chemokine ,T-Lymphocytes ,medicine.medical_treatment ,T cell ,lcsh:Medicine ,Human skin ,Biology ,Immunological memory ,Article ,Mice ,Immune system ,Mice, Inbred NOD ,Candida albicans ,medicine ,Animals ,Humans ,lcsh:Science ,Tissue homeostasis ,Skin ,Multidisciplinary ,Tissue Engineering ,lcsh:R ,Immunological surveillance ,Skin Transplantation ,Middle Aged ,Cell biology ,Experimental models of disease ,Cytokine ,medicine.anatomical_structure ,Humanized mouse ,biology.protein ,Heterografts ,Female ,lcsh:Q ,Immunologic Memory - Abstract
Human skin contains a population of memory T cells that supports tissue homeostasis and provides protective immunity. The study of human memory T cells is often restricted to in vitro studies and to human PBMC serving as primary cell source. Because the tissue environment impacts the phenotype and function of memory T cells, it is crucial to study these cells within their tissue. Here we utilized immunodeficient NOD-scid IL2rγnull (NSG) mice that carried in vivo-generated engineered human skin (ES). ES was generated from human keratinocytes and fibroblasts and was initially devoid of skin-resident immune cells. Upon adoptive transfer of human PBMC, this reductionist system allowed us to study human T cell recruitment from a circulating pool of T cells into non-inflamed human skin in vivo. Circulating human memory T cells preferentially infiltrated ES and showed diverse functional profiles of T cells found in fresh human skin. The chemokine and cytokine microenvironment of ES closely resembled that of non-inflamed human skin. Upon entering the ES T cells assumed a resident memory T cell-like phenotype in the absence of infection, and a proportion of these cutaneous T cells can be locally activated upon injection of monocyte derived dendritic cells (moDCs) that presented Candida albicans. Interestingly, we found that CD69+ memory T cells produced higher levels of effector cytokines in response to Candida albicans, compared to CD69- T cells. Overall, this model has broad utility in many areas of human skin immunology research, including the study of immune-mediated skin diseases.
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- 2020
- Full Text
- View/download PDF
3. 287 Development of a non-invasive, non-viral RNA therapy approach for dystrophic epidermolysis bullosa
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B. Liemberger, J. Bischof, T. Kocher, M. Ablinger, E. Murauer, A. Nyström, V. Wally, E. Mayr, J. Bauer, and U. Koller
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Cell Biology ,Dermatology ,Molecular Biology ,Biochemistry - Published
- 2022
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- View/download PDF
4. First Identification of RNA-Binding Proteins That Regulate Alternative Exons in the Dystrophin Gene
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Mireille Claustres, Anne-Laure Bougé, Michel Koenig, Dylan Da Cunha, Julie Miro, Emmanuelle Beyne, Eva M. Murauer, Sylvie Tuffery-Giraud, Laboratoire de génétique des maladies rares. Pathologie moleculaire, etudes fonctionnelles et banque de données génétiques (LGMR), IFR3, Université Montpellier 1 (UM1)-Université Montpellier 1 (UM1)-Université de Montpellier (UM)-Institut National de la Santé et de la Recherche Médicale (INSERM), Département de génétique médicale, maladies rares et médecine personnalisée [CHRU Montpellier], and Centre Hospitalier Régional Universitaire [Montpellier] (CHRU Montpellier)
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TDP-43 ,Duchenne muscular dystrophy ,RNA-binding protein ,lcsh:Chemistry ,Dystrophin ,Exon ,0302 clinical medicine ,lcsh:QH301-705.5 ,Spectroscopy ,0303 health sciences ,General Medicine ,Exons ,Computer Science Applications ,Cell biology ,RNA-binding proteins (RBPs), alternative splicing ,RNA Recognition Motif Proteins ,RNA splicing ,RNA Interference ,RNA-binding proteins (RBPs) ,Gene isoform ,musculoskeletal diseases ,Adult ,Myoblasts, Skeletal ,Biology ,Catalysis ,Article ,Cell Line ,Inorganic Chemistry ,03 medical and health sciences ,alternative splicing ,targeted RNA-seq ,medicine ,Humans ,TargetedRNA-seq ,Physical and Theoretical Chemistry ,skeletal muscle ,Molecular Biology ,Gene ,030304 developmental biology ,Organic Chemistry ,Alternative splicing ,medicine.disease ,Introns ,lcsh:Biology (General) ,lcsh:QD1-999 ,[SDV.GEN.GH]Life Sciences [q-bio]/Genetics/Human genetics ,Gene Expression Regulation ,biology.protein ,030217 neurology & neurosurgery ,DMD gene - Abstract
International audience; The Duchenne muscular dystrophy (DMD) gene has a complex expression pattern regulated by multiple tissue-specific promoters and by alternative splicing (AS) of the resulting transcripts. Here, we used an RNAi-based approach coupled with DMD-targeted RNA-seq to identify RNA-binding proteins (RBPs) that regulate splicing of its skeletal muscle isoform (Dp427m) in a human muscular cell line. A total of 16 RBPs comprising the major regulators of muscle-specific splicing events were tested. We show that distinct combinations of RBPs maintain the correct inclusion in the Dp427m of exons that undergo spatio-temporal AS in other dystrophin isoforms. In particular, our findings revealed the complex networks of RBPs contributing to the splicing of the two short DMD exons 71 and 78, the inclusion of exon 78 in the adult Dp427m isoform being crucial for muscle function. Among the RBPs tested, QKI and DDX5/DDX17 proteins are important determinants of DMD exon inclusion. This is the first large-scale study to determine which RBP proteins act on the physiological splicing of the DMD gene. Our data shed light on molecular mechanisms contributing to the expression of the different dystrophin isoforms, which could be influenced by a change in the function or expression level of the identified RBPs.
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- 2020
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5. A cancer stem cell-like phenotype is associated with miR-10b expression in aggressive squamous cell carcinomas
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Manuela Reisenberger, M. Wimmer, Stefan Hainzl, Julia Reichelt, Albert S. Mellick, Thomas Lettner, Johannes Proell, Christina Guttmann-Gruber, Mila Sajinovic, Eva M. Murauer, Verena Wally, Paul de Souza, Thomas Kocher, Michael Ablinger, R. Zauner, Johann W. Bauer, Norbert Niklas, Dirk Strunk, and Josefina Piñón-Hofbauer
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Keratinocytes ,Cell type ,Skin Neoplasms ,Primary Cell Culture ,Population ,Cell ,lcsh:Medicine ,Biology ,Biochemistry ,Metastasis ,Transcriptome ,03 medical and health sciences ,0302 clinical medicine ,Cancer stem cell ,Squamous cell carcinoma ,microRNA ,medicine ,Humans ,Neoplasm Invasiveness ,lcsh:QH573-671 ,Epidermolysis bullosa ,education ,Molecular Biology ,Cells, Cultured ,030304 developmental biology ,0303 health sciences ,education.field_of_study ,lcsh:Cytology ,Research ,lcsh:R ,Cell Biology ,medicine.disease ,Epidermolysis Bullosa Dystrophica ,Gene Expression Regulation, Neoplastic ,MicroRNAs ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Carcinoma, Squamous Cell ,Neoplastic Stem Cells ,Cancer research ,miR-10b - Abstract
Background Cutaneous squamous cell carcinomas (cSCC) are the primary cause of premature deaths in patients suffering from the rare skin-fragility disorder recessive dystrophic epidermolysis bullosa (RDEB), which is in marked contrast to the rarely metastasizing nature of these carcinomas in the general population. This remarkable difference is attributed to the frequent development of chronic wounds caused by impaired skin integrity. However, the specific molecular and cellular changes to malignancy, and whether there are common players in different types of aggressive cSCCs, remain relatively undefined. Methods MiRNA expression profiling was performed across various cell types isolated from skin and cSCCs. Microarray results were confirmed by qPCR and by an optimized in situ hybridization protocol. Functional impact of overexpression or knock-out of a dysregulated miRNA was assessed in migration and 3D-spheroid assays. Sample-matched transcriptome data was generated to support the identification of disease relevant miRNA targets. Results Several miRNAs were identified as dysregulated in cSCCs compared to control skin. These included the metastasis-linked miR-10b, which was significantly upregulated in primary cell cultures and in archival biopsies. At the functional level, overexpression of miR-10b conferred the stem cell-characteristic of 3D-spheroid formation capacity to keratinocytes. Analysis of miR-10b downstream effects identified a novel putative target of miR-10b, the actin- and tubulin cytoskeleton-associated protein DIAPH2. Conclusion The discovery that miR-10b mediates an aspect of cancer stemness – that of enhanced tumor cell adhesion, known to facilitate metastatic colonization – provides an important avenue for future development of novel therapies targeting this metastasis-linked miRNA.
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- 2020
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6. QR-313, an Antisense Oligonucleotide, Shows Therapeutic Efficacy for Treatment of Dominant and Recessive Dystrophic Epidermolysis Bullosa: A Preclinical Study
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Verena Wally, Douglas R. Keene, M. Peter Marinkovich, Sara F. Tufa, Eva M. Murauer, Elisabeth M. Haisma, Alexander Nyström, Ulrich Koller, Dimitra Kiritsi, Pauline Nauroy, Marieke Hogervorst, Olivier Bornert, Stefan Hainzl, Gerard Platenburg, Ingrid Hausser, Tita Ritsema, Ioannis Athanasiou, Jim Swildens, and Johannes Bischof
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0301 basic medicine ,Keratinocytes ,Collagen Type VII ,Biopsy ,Primary Cell Culture ,Mice, Transgenic ,Dermatology ,Biochemistry ,Cell Line ,03 medical and health sciences ,Exon ,Mice ,0302 clinical medicine ,Fibrosis ,Medicine ,Animals ,Humans ,Molecular Biology ,Gene ,Dermoepidermal junction ,Skin ,Wound Healing ,integumentary system ,business.industry ,Wild type ,Cell Biology ,Exons ,Genetic Therapy ,Fibroblasts ,Oligonucleotides, Antisense ,medicine.disease ,Exon skipping ,Epidermolysis Bullosa Dystrophica ,Disease Models, Animal ,030104 developmental biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Mutation ,Cancer research ,business ,Wound healing ,Keratinocyte - Abstract
Dystrophic epidermolysis bullosa (DEB) is a blistering skin disease caused by mutations in the gene COL7A1 encoding collagen VII. DEB can be inherited as recessive DEB (RDEB) or dominant DEB (DDEB) and is associated with a high wound burden. Perpetual cycles of wounding and healing drive fibrosis in DDEB and RDEB, as well as the formation of a tumor-permissive microenvironment. Prolonging wound-free episodes by improving the quality of wound healing would therefore confer substantial benefit for individuals with DEB. The collagenous domain of collagen VII is encoded by 82 in-frame exons, which makes splice-modulation therapies attractive for DEB. Indeed, antisense oligonucleotide–based exon skipping has shown promise for RDEB. However, the suitability of antisense oligonucleotides for treatment of DDEB remains unexplored. Here, we developed QR-313, a clinically applicable, potent antisense oligonucleotide specifically targeting exon 73. We show the feasibility of topical delivery of QR-313 in a carbomer-composed gel for treatment of wounds to restore collagen VII abundance in human RDEB skin. Our data reveal that QR-313 also shows direct benefit for DDEB caused by exon 73 mutations. Thus, the same topically applied therapeutic could be used to improve the wound healing quality in RDEB and DDEB.
- Published
- 2019
7. A novel humanized mouse model to study the function of human cutaneous memory T cells in vivo in human skin
- Author
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Theresa Neuper, Eva M. Murauer, Maria M. Klicznik, Iris K. Gratz, Daniel J. Campbell, Roland Reitsamer, Ariane Benedetti, Raimund Holly, Laura M Gail, Andreas Sir, Michael Rosenblum, Jutta Horejs-Hoeck, Martin Laimer, Suraj R Varkhande, and Angelika Stoecklinger
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0303 health sciences ,integumentary system ,medicine.medical_treatment ,T cell ,Human skin ,Biology ,Cell biology ,03 medical and health sciences ,0302 clinical medicine ,medicine.anatomical_structure ,Cytokine ,Immune system ,030220 oncology & carcinogenesis ,Humanized mouse ,medicine ,Skin immunity ,Memory T cell ,Tissue homeostasis ,030304 developmental biology - Abstract
Human skin contains a population of memory T cells that support tissue homeostasis and provide protective immunity. The study of human memory T cells is often restricted to in vitro studies and to human PBMC serving as primary cell source. Because the tisse environment impacts the phenotype and function of memory T cells, it is crucial to study these cells within their tissue. Here we utilized immunodeficient NOD-scid IL2rγnull (NSG) mice that carried in vivo-generated engineered human skin (ES). ES were generated from human keratinocytes and fibroblasts and is initially devoid of skin-resident immune cells. Upon adoptive transfer of human PBMC this reductionist system allowed to study human T cell recruitment from a circulating pool of T cells into non-inflamed human skin in vivo. Circulating human memory T cells preferentially infiltrated ES and showed diverse functional profiles of T cells found in fresh human skin. The chemokine and cytokine microenvironment of ES closely resembled that of non-inflamed human skin. Upon entering the ES T cells assumed a resident memory T cell-like phenotype in the absence of infection, and a proportion of these cutaneous T cells can be locally activated upon injection of monocyte derived dendritic cells (moDCs) that presented Candida albicans. Interestingly, we found that CD69+ memory T cells produced higher levels of effector cytokines in response to Candida albicans, compared to CD69- T cells. Overall, this model has broad utility in many areas of human skin immunology research, including the study of immune-mediated skin diseases.
- Published
- 2018
- Full Text
- View/download PDF
8. A Reporter-Based Screen to Identify Potent 3’ Trans-Splicing Molecules for Endogenous RNA Repair
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Eva M. Murauer, Verena Wally, Johann W. Bauer, Ulrich Koller, and Stefan Hainzl
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Keratinocytes ,Collagen Type VII ,Blotting, Western ,Genetic Vectors ,Green Fluorescent Proteins ,Molecular Sequence Data ,Trans-splicing ,Genes, Recessive ,Biology ,Transfection ,medicine.disease_cause ,Applied Microbiology and Biotechnology ,Trans-Splicing ,Exon ,Genes, Reporter ,Genetics ,medicine ,Humans ,RNA, Messenger ,Cloning, Molecular ,Genetics (clinical) ,Pharmacology ,Messenger RNA ,Mutation ,Base Sequence ,HEK 293 cells ,Intron ,Epidermolysis bullosa dystrophica ,RNA ,Exons ,Flow Cytometry ,medicine.disease ,Molecular biology ,Epidermolysis Bullosa Dystrophica ,Cell biology ,HEK293 Cells ,Retroviridae ,Molecular Medicine - Abstract
In the treatment of genetic disorders, repairing defective pre-mRNAs by RNA trans-splicing has become an emerging alternative to conventional gene therapy. Previous studies have made clear that the design of the binding domains of the corrective RNA trans-splicing molecules (RTMs) is crucial for their optimal functionality. We established a reporter-based screening method that allows for selection of highly functional RTMs from a large pool of variants. The efficiency and functionality of the screen were validated in the COL7A1 gene, in which mutations are the cause of the skin disease dystrophic epidermolysis bullosa. Comparison of RTMs containing different binding domains hybridizing to COL7A1 intron 64/exon 65 revealed highly different trans-splicing efficiencies. Isolated RTMs were then adapted for endogenous trans-splicing in a recessive dystrophic epidermolysis bullosa (RDEB) keratinocyte cell line expressing reduced levels of COL7A1 mRNA. Our results confirm the applicability and relevance of prescreening reporter RTMs, as significant levels of endogenous COL7A1 mRNA repair were seen with RTMs identified as being highly efficient in our screening system.
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- 2013
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9. Spliceosome-Mediated Trans-Splicing: The Therapeutic Cut and Paste
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Eva M. Murauer, Verena Wally, and Johann W. Bauer
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Spliceosome ,RNA Splicing ,Trans-splicing ,Cystic Fibrosis Transmembrane Conductance Regulator ,Dermatology ,Computational biology ,Biology ,Biochemistry ,Genetic therapy ,Trans-Splicing ,Mice ,medicine ,Animals ,Humans ,Molecular Biology ,Gene ,Alleles ,Models, Genetic ,business.industry ,Genetic Diseases, Inborn ,technology, industry, and agriculture ,RNA ,Genetic Therapy ,Cell Biology ,medicine.disease ,humanities ,Biotechnology ,Phenotype ,Genetic Techniques ,Mutation ,RNA splicing ,Carcinoma, Squamous Cell ,Spliceosomes ,Epidermolysis bullosa ,business - Abstract
Spliceosome-mediated RNA trans-splicing (SMaRT) is an RNA-based technology to reprogram genes for diagnostic and therapeutic purposes. For the correction of genetic diseases, SMaRT offers several advantages over traditional gene-replacement strategies. SMaRT protocols have recently been used for in vitro phenotypic correction of a variety of genetic disorders, ranging from epidermolysis bullosa to neurodegenerative diseases. In vivo studies are currently bringing trans-splicing RNA therapy toward clinical application. In this review, we summarize the progress made toward the medical use of SMaRT and provide an outlook on its upcoming applications.
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- 2012
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10. The Pathogenetic Role of IL-1β in Severe Epidermolysis Bullosa Simplex
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Stefan Hainzl, Patricia Peking, Johann W. Bauer, Eva M. Murauer, Verena Wally, Doris Peckl-Schmid, Helmut Hintner, and Thomas Lettner
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Keratinocytes ,medicine.medical_specialty ,MAP Kinase Signaling System ,business.industry ,Interleukin-1beta ,Anti-Inflammatory Agents ,Keratin-14 ,Anthraquinones ,Cell Biology ,Dermatology ,medicine.disease ,Severity of Illness Index ,Biochemistry ,Antibodies ,Epidermolysis bullosa simplex ,Epidermolysis Bullosa Simplex ,Mutation ,Humans ,Medicine ,business ,Molecular Biology ,Alleles ,Cells, Cultured ,Signal Transduction - Published
- 2013
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11. 185 CRISPR/Cas9 mediated gene correction of COL7A1
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Eva M. Murauer, M. Del Rio, Alfred Klausegger, Stefan Hainzl, Blanca Duarte, Patricia Peking, Julia Reichelt, Fernando Larcher, Ulrich Koller, Johann W. Bauer, Markus Steiner, and Thomas Kocher
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CRISPR interference ,CRISPR ,Cell Biology ,Dermatology ,Computational biology ,Biology ,Molecular Biology ,Biochemistry ,Gene - Published
- 2017
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12. 189 Improved safety profile: An efficient CRISPR/Cas9 double nicking approach for KRT14 repair in EB simplex
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Alfred Klausegger, Eva M. Murauer, Johann W. Bauer, Patricia Peking, Verena Wally, Michael Ablinger, Thomas Kocher, Thomas Lettner, Julia Reichelt, J. Piñón Hofbauer, Stefan Hainzl, and Ulrich Koller
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Safety profile ,EB simplex ,CRISPR ,Cell Biology ,Dermatology ,Biology ,Molecular Biology ,Biochemistry ,Virology - Published
- 2017
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13. 302 A novel population of skin-tropic T cells with a potential role in wound healing
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Maria M. Klicznik, Thomas Duhen, B. Hoellbacher, Samantha Motley, Roland Reitsamer, Daniel J. Campbell, Iris K. Gratz, Eva M. Murauer, and Andreas Sir
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education.field_of_study ,business.industry ,Population ,Immunology ,Medicine ,Cell Biology ,Dermatology ,Wound healing ,education ,business ,Molecular Biology ,Biochemistry - Published
- 2017
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14. 560 Transcriptome profiling in recessive dystrophic epidermolysis bullosa patients
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Verena Wally, Johann W. Bauer, M. Wimmer, Dirk Strunk, Julia Reichelt, R. Zauner, Eva M. Murauer, Christina Gruber, and Thomas Lettner
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medicine.medical_specialty ,business.industry ,Recessive dystrophic epidermolysis bullosa ,Medicine ,Transcriptome profiling ,Cell Biology ,Dermatology ,business ,Molecular Biology ,Biochemistry - Published
- 2017
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15. 214 RNA trans-splicing-mediated COL7A1 repair in a dystrophic epidermolysis bullosa mouse model
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Patricia Peking, A. Nystroem, Eva M. Murauer, Julia Reichelt, Thomas Kocher, Johann W. Bauer, and Ulrich Koller
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Dystrophic epidermolysis bullosa ,Cell Biology ,Dermatology ,Biology ,Molecular Biology ,Biochemistry ,Molecular biology ,RNA Trans-Splicing - Published
- 2017
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16. 212 Antisense RNA-mediated improvement of SMaRT therapy for KRT14 correction
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Bernadette Liemberger, Eva M. Murauer, Claudia Arzt, Julia Reichelt, Johann W. Bauer, Ulrich Koller, Stefan Hainzl, J. Piñón Hofbauer, and Thomas Kocher
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Cancer research ,Cell Biology ,Dermatology ,Biology ,Molecular Biology ,Biochemistry ,Antisense RNA - Published
- 2017
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17. 535 Ex vivo COL7A1 editing via CRISPR/Cas9 in recessive dystrophic epidermolysis bullosa
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M. Steiner, Johann W. Bauer, Stefan Hainzl, Fernando Larcher, Julia Reichelt, Ulrich Koller, Thomas Kocher, Eva M. Murauer, Patricia Peking, and Blanca Duarte
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medicine.medical_specialty ,Pathology ,Recessive dystrophic epidermolysis bullosa ,medicine ,CRISPR ,Cell Biology ,Dermatology ,Biology ,Molecular Biology ,Biochemistry ,Ex vivo - Published
- 2017
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18. 164 CRISPR/Cas9-mediated gene repair in the COL7A1 gene
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Eva M. Murauer, Johann W. Bauer, Ulrich Koller, Thomas Kocher, Stefan Hainzl, Fernando Larcher, Markus Steiner, and Julia Reichelt
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CRISPR interference ,Intron ,Cell Biology ,Dermatology ,Gene mutation ,Biology ,medicine.disease ,Biochemistry ,Molecular biology ,Exon ,RNA splicing ,medicine ,Epidermolysis bullosa ,Molecular Biology ,Gene ,Minigene - Abstract
164 CRISPR/Cas9-mediated gene repair in the COL7A1 gene S Hainzl, T Kocher, EM Murauer, F Larcher, M Steiner, JW Bauer, J Reichelt and U Koller 1 EB House Austria, Research Program for Molecular Therapy of Genodermatoses, Department of Dermatology, University Hospital of the Paracelsus Medical University, Salzburg, Austria, 2 Department of Dermatology, Paracelsus Medical University, Salzburg, Austria, 3 Epithelial Biomedicine Division, CIEMAT, Madrid, Spain and 4 3rd Medical Department, Paracelsus Medical University Salzburg, Austria, Laboratory for Immunological and Molecular Cancer Research, Salzburg, Austria The CRISPR/Cas9 system turned out to be a powerful tool for genome editing and is therefore a promising option for the specific repair of gene mutations causing the blistering skin disease epidermolysis bullosa (EB). We have exploited the CRISPR/Cas9-mediated homologydirected repair (HDR) approach for the correction of a homozygous mutation in COL7A1 exon 80, leading to a complete loss of type VII collagen within the basement membrane zone of the skin. We have predicted a guide RNA (gRNA) specific for intron 80 of COL7A1, which was then cloned either into a wild-type Cas9 dual vector system, inducing double strand breaks, or a D10A Cas9 dual vector system, causing single strand breaks within the target intron. Homology COL7A1 arms for HDR were cloned into a donor vector, including a selection cassette. Transfected patient keratinocytes were selected either via antibiotic selection or fluorescent-activated cell sorting (FACS). RT-PCR on genomic DNA of treated cells and subsequent restriction enzyme digest analysis of the resulting PCR products showed the genetic correction of the COL7A1 mutation. The mutation-specific enzymatic digest revealed the presence of 26% reverted alleles. Additionally, type VII collagen restoration was confirmed via Western blot analysis and immunofluorescence staining. Our data indicate that genome editing using the CRISPR/Cas9 system can be an elegant tool for the repair of genes involved in the severe skin disease epidermolysis bullosa. 165 Combining antisense molecules with splicing modulation for KRT14 repair in epidermolysis bullosa B Liemberger, C Arzt, S Hainzl, J Pinon Hofbauer, V Wally, EM Murauer, JW Bauer, J Reichelt and U Koller 1 EB House Austria, Research Program for Molecular Therapy of Genodermatoses, Department of Dermatology, University Hospital of the Paracelsus Medical University, Salzburg, Austria and 2 Department of Dermatology, Paracelsus Medical University Salzburg, Austria, Salzburg, Austria Epidermolysis bullosa (EB) is an inherited skin disease characterized by severe blistering of the skin and mucous membranes after minor mechanical trauma. In EB simplex (EBS) dominant mutations within KRT14 encoding keratin 14 lead to loss of integrity of the intermediate filament network within basal keratinocytes. In order to correct a dominant mutation in an EBS patient cell line, we exploited the RNA trans-splicing technology which utilizes the cell’s endogenous splicing machinery to facilitate a trans-splicing reaction between two RNAs, generating a new chimeric product at the pre-mRNA level. The designed RNA transsplicing molecule (RTM), containing a binding domain, splicing elements, and the wild-type KRT14 region to be introduced, has already been shown to be able to partially revert the EBS phenotype at the cellular level. In order to increase the repair efficiency mediated by RNA trans-splicing, antisense RNAs (asRNAs) specific for splice sites or splicing enhancer sequences within the KRT14 target pre-mRNA region were randomly generated with the aim of blocking these cis-splicing elements thereby increasing the trans-splicing rate. We analysed the functionality of 76 individual asRNAs by exploiting our fluorescence-based screening system, in which reconstitution of a GFP signal acts as a readout for accurate trans-splicing between a generated KRT14 minigene (KRT14-MG) and the RTM. Triple transfection experiments in HEK293 cells of the KRT14-MG, the RTM, and the most functional asRNA revealed an increase in trans-splicing efficiency of up to 7 fold as monitored by flow cytometry. Our data suggest that the inclusion of asRNAs can increase the trans-splicing efficiency to levels needed to overcome the EBS phenotype.
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- 2016
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19. 169 Regeneration of a functional epidermis at a large, long-standing wound by gene-corrected autologous epidermal stem cells
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Johann W. Bauer, Elena Enzo, Wolfgang Muss, M. De Luca, L. De Rosa, Eva M. Murauer, Elisabeth Mayr, Josef Koller, Sonia Carulli, and Graziella Pellegrini
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Intron ,RNA ,Cell Biology ,Dermatology ,Gene mutation ,Biology ,medicine.disease ,Biochemistry ,Molecular biology ,Exon ,RNA splicing ,medicine ,Epidermolysis bullosa ,Molecular Biology ,Gene ,Minigene - Abstract
164 CRISPR/Cas9-mediated gene repair in the COL7A1 gene S Hainzl, T Kocher, EM Murauer, F Larcher, M Steiner, JW Bauer, J Reichelt and U Koller 1 EB House Austria, Research Program for Molecular Therapy of Genodermatoses, Department of Dermatology, University Hospital of the Paracelsus Medical University, Salzburg, Austria, 2 Department of Dermatology, Paracelsus Medical University, Salzburg, Austria, 3 Epithelial Biomedicine Division, CIEMAT, Madrid, Spain and 4 3rd Medical Department, Paracelsus Medical University Salzburg, Austria, Laboratory for Immunological and Molecular Cancer Research, Salzburg, Austria The CRISPR/Cas9 system turned out to be a powerful tool for genome editing and is therefore a promising option for the specific repair of gene mutations causing the blistering skin disease epidermolysis bullosa (EB). We have exploited the CRISPR/Cas9-mediated homologydirected repair (HDR) approach for the correction of a homozygous mutation in COL7A1 exon 80, leading to a complete loss of type VII collagen within the basement membrane zone of the skin. We have predicted a guide RNA (gRNA) specific for intron 80 of COL7A1, which was then cloned either into a wild-type Cas9 dual vector system, inducing double strand breaks, or a D10A Cas9 dual vector system, causing single strand breaks within the target intron. Homology COL7A1 arms for HDR were cloned into a donor vector, including a selection cassette. Transfected patient keratinocytes were selected either via antibiotic selection or fluorescent-activated cell sorting (FACS). RT-PCR on genomic DNA of treated cells and subsequent restriction enzyme digest analysis of the resulting PCR products showed the genetic correction of the COL7A1 mutation. The mutation-specific enzymatic digest revealed the presence of 26% reverted alleles. Additionally, type VII collagen restoration was confirmed via Western blot analysis and immunofluorescence staining. Our data indicate that genome editing using the CRISPR/Cas9 system can be an elegant tool for the repair of genes involved in the severe skin disease epidermolysis bullosa. 165 Combining antisense molecules with splicing modulation for KRT14 repair in epidermolysis bullosa B Liemberger, C Arzt, S Hainzl, J Pinon Hofbauer, V Wally, EM Murauer, JW Bauer, J Reichelt and U Koller 1 EB House Austria, Research Program for Molecular Therapy of Genodermatoses, Department of Dermatology, University Hospital of the Paracelsus Medical University, Salzburg, Austria and 2 Department of Dermatology, Paracelsus Medical University Salzburg, Austria, Salzburg, Austria Epidermolysis bullosa (EB) is an inherited skin disease characterized by severe blistering of the skin and mucous membranes after minor mechanical trauma. In EB simplex (EBS) dominant mutations within KRT14 encoding keratin 14 lead to loss of integrity of the intermediate filament network within basal keratinocytes. In order to correct a dominant mutation in an EBS patient cell line, we exploited the RNA trans-splicing technology which utilizes the cell’s endogenous splicing machinery to facilitate a trans-splicing reaction between two RNAs, generating a new chimeric product at the pre-mRNA level. The designed RNA transsplicing molecule (RTM), containing a binding domain, splicing elements, and the wild-type KRT14 region to be introduced, has already been shown to be able to partially revert the EBS phenotype at the cellular level. In order to increase the repair efficiency mediated by RNA trans-splicing, antisense RNAs (asRNAs) specific for splice sites or splicing enhancer sequences within the KRT14 target pre-mRNA region were randomly generated with the aim of blocking these cis-splicing elements thereby increasing the trans-splicing rate. We analysed the functionality of 76 individual asRNAs by exploiting our fluorescence-based screening system, in which reconstitution of a GFP signal acts as a readout for accurate trans-splicing between a generated KRT14 minigene (KRT14-MG) and the RTM. Triple transfection experiments in HEK293 cells of the KRT14-MG, the RTM, and the most functional asRNA revealed an increase in trans-splicing efficiency of up to 7 fold as monitored by flow cytometry. Our data suggest that the inclusion of asRNAs can increase the trans-splicing efficiency to levels needed to overcome the EBS phenotype.
- Published
- 2016
- Full Text
- View/download PDF
20. 167 Long-term in vivo correction of a recessive dystrophic epidermolysis bullosa phenotype using RNA trans -splicing repair
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Blanca Duarte, Ulrich Koller, Patricia Peking, Eva M. Murauer, Susanne A. Wolf, Axel Schambach, M. García Díez, Johann W. Bauer, Fernando Larcher, and R. Murrillas
- Subjects
Intron ,RNA ,Cell Biology ,Dermatology ,Biology ,Gene mutation ,medicine.disease ,Biochemistry ,Molecular biology ,Exon ,RNA splicing ,medicine ,Epidermolysis bullosa ,Molecular Biology ,Gene ,Minigene - Abstract
164 CRISPR/Cas9-mediated gene repair in the COL7A1 gene S Hainzl, T Kocher, EM Murauer, F Larcher, M Steiner, JW Bauer, J Reichelt and U Koller 1 EB House Austria, Research Program for Molecular Therapy of Genodermatoses, Department of Dermatology, University Hospital of the Paracelsus Medical University, Salzburg, Austria, 2 Department of Dermatology, Paracelsus Medical University, Salzburg, Austria, 3 Epithelial Biomedicine Division, CIEMAT, Madrid, Spain and 4 3rd Medical Department, Paracelsus Medical University Salzburg, Austria, Laboratory for Immunological and Molecular Cancer Research, Salzburg, Austria The CRISPR/Cas9 system turned out to be a powerful tool for genome editing and is therefore a promising option for the specific repair of gene mutations causing the blistering skin disease epidermolysis bullosa (EB). We have exploited the CRISPR/Cas9-mediated homologydirected repair (HDR) approach for the correction of a homozygous mutation in COL7A1 exon 80, leading to a complete loss of type VII collagen within the basement membrane zone of the skin. We have predicted a guide RNA (gRNA) specific for intron 80 of COL7A1, which was then cloned either into a wild-type Cas9 dual vector system, inducing double strand breaks, or a D10A Cas9 dual vector system, causing single strand breaks within the target intron. Homology COL7A1 arms for HDR were cloned into a donor vector, including a selection cassette. Transfected patient keratinocytes were selected either via antibiotic selection or fluorescent-activated cell sorting (FACS). RT-PCR on genomic DNA of treated cells and subsequent restriction enzyme digest analysis of the resulting PCR products showed the genetic correction of the COL7A1 mutation. The mutation-specific enzymatic digest revealed the presence of 26% reverted alleles. Additionally, type VII collagen restoration was confirmed via Western blot analysis and immunofluorescence staining. Our data indicate that genome editing using the CRISPR/Cas9 system can be an elegant tool for the repair of genes involved in the severe skin disease epidermolysis bullosa. 165 Combining antisense molecules with splicing modulation for KRT14 repair in epidermolysis bullosa B Liemberger, C Arzt, S Hainzl, J Pinon Hofbauer, V Wally, EM Murauer, JW Bauer, J Reichelt and U Koller 1 EB House Austria, Research Program for Molecular Therapy of Genodermatoses, Department of Dermatology, University Hospital of the Paracelsus Medical University, Salzburg, Austria and 2 Department of Dermatology, Paracelsus Medical University Salzburg, Austria, Salzburg, Austria Epidermolysis bullosa (EB) is an inherited skin disease characterized by severe blistering of the skin and mucous membranes after minor mechanical trauma. In EB simplex (EBS) dominant mutations within KRT14 encoding keratin 14 lead to loss of integrity of the intermediate filament network within basal keratinocytes. In order to correct a dominant mutation in an EBS patient cell line, we exploited the RNA trans-splicing technology which utilizes the cell’s endogenous splicing machinery to facilitate a trans-splicing reaction between two RNAs, generating a new chimeric product at the pre-mRNA level. The designed RNA transsplicing molecule (RTM), containing a binding domain, splicing elements, and the wild-type KRT14 region to be introduced, has already been shown to be able to partially revert the EBS phenotype at the cellular level. In order to increase the repair efficiency mediated by RNA trans-splicing, antisense RNAs (asRNAs) specific for splice sites or splicing enhancer sequences within the KRT14 target pre-mRNA region were randomly generated with the aim of blocking these cis-splicing elements thereby increasing the trans-splicing rate. We analysed the functionality of 76 individual asRNAs by exploiting our fluorescence-based screening system, in which reconstitution of a GFP signal acts as a readout for accurate trans-splicing between a generated KRT14 minigene (KRT14-MG) and the RTM. Triple transfection experiments in HEK293 cells of the KRT14-MG, the RTM, and the most functional asRNA revealed an increase in trans-splicing efficiency of up to 7 fold as monitored by flow cytometry. Our data suggest that the inclusion of asRNAs can increase the trans-splicing efficiency to levels needed to overcome the EBS phenotype.
- Published
- 2016
- Full Text
- View/download PDF
21. 165 Combining antisense molecules with splicing modulation for KRT14 repair in epidermolysis bullosa
- Author
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Bernadette Liemberger, Ulrich Koller, J. Piñón Hofbauer, Johann W. Bauer, Verena Wally, Stefan Hainzl, Eva M. Murauer, Julia Reichelt, and Claudia Arzt
- Subjects
Intron ,RNA ,Cell Biology ,Dermatology ,Gene mutation ,Biology ,medicine.disease ,Biochemistry ,Molecular biology ,Exon ,RNA splicing ,medicine ,Epidermolysis bullosa ,Molecular Biology ,Gene ,Minigene - Abstract
164 CRISPR/Cas9-mediated gene repair in the COL7A1 gene S Hainzl, T Kocher, EM Murauer, F Larcher, M Steiner, JW Bauer, J Reichelt and U Koller 1 EB House Austria, Research Program for Molecular Therapy of Genodermatoses, Department of Dermatology, University Hospital of the Paracelsus Medical University, Salzburg, Austria, 2 Department of Dermatology, Paracelsus Medical University, Salzburg, Austria, 3 Epithelial Biomedicine Division, CIEMAT, Madrid, Spain and 4 3rd Medical Department, Paracelsus Medical University Salzburg, Austria, Laboratory for Immunological and Molecular Cancer Research, Salzburg, Austria The CRISPR/Cas9 system turned out to be a powerful tool for genome editing and is therefore a promising option for the specific repair of gene mutations causing the blistering skin disease epidermolysis bullosa (EB). We have exploited the CRISPR/Cas9-mediated homologydirected repair (HDR) approach for the correction of a homozygous mutation in COL7A1 exon 80, leading to a complete loss of type VII collagen within the basement membrane zone of the skin. We have predicted a guide RNA (gRNA) specific for intron 80 of COL7A1, which was then cloned either into a wild-type Cas9 dual vector system, inducing double strand breaks, or a D10A Cas9 dual vector system, causing single strand breaks within the target intron. Homology COL7A1 arms for HDR were cloned into a donor vector, including a selection cassette. Transfected patient keratinocytes were selected either via antibiotic selection or fluorescent-activated cell sorting (FACS). RT-PCR on genomic DNA of treated cells and subsequent restriction enzyme digest analysis of the resulting PCR products showed the genetic correction of the COL7A1 mutation. The mutation-specific enzymatic digest revealed the presence of 26% reverted alleles. Additionally, type VII collagen restoration was confirmed via Western blot analysis and immunofluorescence staining. Our data indicate that genome editing using the CRISPR/Cas9 system can be an elegant tool for the repair of genes involved in the severe skin disease epidermolysis bullosa. 165 Combining antisense molecules with splicing modulation for KRT14 repair in epidermolysis bullosa B Liemberger, C Arzt, S Hainzl, J Pinon Hofbauer, V Wally, EM Murauer, JW Bauer, J Reichelt and U Koller 1 EB House Austria, Research Program for Molecular Therapy of Genodermatoses, Department of Dermatology, University Hospital of the Paracelsus Medical University, Salzburg, Austria and 2 Department of Dermatology, Paracelsus Medical University Salzburg, Austria, Salzburg, Austria Epidermolysis bullosa (EB) is an inherited skin disease characterized by severe blistering of the skin and mucous membranes after minor mechanical trauma. In EB simplex (EBS) dominant mutations within KRT14 encoding keratin 14 lead to loss of integrity of the intermediate filament network within basal keratinocytes. In order to correct a dominant mutation in an EBS patient cell line, we exploited the RNA trans-splicing technology which utilizes the cell’s endogenous splicing machinery to facilitate a trans-splicing reaction between two RNAs, generating a new chimeric product at the pre-mRNA level. The designed RNA transsplicing molecule (RTM), containing a binding domain, splicing elements, and the wild-type KRT14 region to be introduced, has already been shown to be able to partially revert the EBS phenotype at the cellular level. In order to increase the repair efficiency mediated by RNA trans-splicing, antisense RNAs (asRNAs) specific for splice sites or splicing enhancer sequences within the KRT14 target pre-mRNA region were randomly generated with the aim of blocking these cis-splicing elements thereby increasing the trans-splicing rate. We analysed the functionality of 76 individual asRNAs by exploiting our fluorescence-based screening system, in which reconstitution of a GFP signal acts as a readout for accurate trans-splicing between a generated KRT14 minigene (KRT14-MG) and the RTM. Triple transfection experiments in HEK293 cells of the KRT14-MG, the RTM, and the most functional asRNA revealed an increase in trans-splicing efficiency of up to 7 fold as monitored by flow cytometry. Our data suggest that the inclusion of asRNAs can increase the trans-splicing efficiency to levels needed to overcome the EBS phenotype.
- Published
- 2016
- Full Text
- View/download PDF
22. Functional Correction of Type VII Collagen Expression in Dystrophic Epidermolysis Bullosa
- Author
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Yannick Gache, Eva M. Murauer, Johann W. Bauer, Iris K. Gratz, Guerrino Meneguzzi, Wolfgang Muss, Alfred Klausegger, Helmut Hintner, and Christina Gruber
- Subjects
Keratinocytes ,Pathology ,medicine.medical_specialty ,Collagen Type VII ,Biopsy ,Genetic enhancement ,Dermatology ,Biochemistry ,Organ Culture Techniques ,Transduction, Genetic ,Complementary DNA ,COL7A1 Gene ,medicine ,Humans ,RNA, Messenger ,Allele ,Molecular Biology ,Gene ,Cells, Cultured ,business.industry ,Genetic Therapy ,Cell Biology ,Phenotype ,Molecular biology ,In vitro ,Epidermolysis Bullosa Dystrophica ,Alternative Splicing ,Retroviridae ,Codon, Nonsense ,RNA splicing ,business - Abstract
Functional defects in type VII collagen, caused by premature termination codons on both alleles of the COL7A1 gene, are responsible for the severe autosomal recessive types of the skin blistering disease, recessive dystrophic epidermolysis bullosa (RDEB). The full-length COL7A1 complementary DNA (cDNA) is about 9kb, a size that is hardly accommodated by therapeutically used retroviral vectors. Although there have been successful attempts to produce functional type VII collagen protein in model systems of RDEB, the risk of genetic rearrangements of the large repetitive cDNA sequence may hamper the clinical application of full-length COL7A1 cDNA in the human system. Therefore, we used trans -splicing to reduce the size of the COL7A1 transcript. Retroviral transduction of RDEB keratinocytes with a 3′ pre- trans -splicing molecule resulted in correction of full-length type VII collagen expression. Unlike parental RDEB keratinocytes, transduced cells displayed normal morphology and reduced invasive capacity. Moreover, transduced cells showed normal localization of type VII collagen at the basement membrane zone in skin equivalents, where it assembled into anchoring fibril-like structures. Thus, using trans -splicing we achieved correction of an RDEB phenotype in vitro , which marks an important step toward its application in gene therapy in vivo .JID JOURNAL CLUB ARTICLE: For questions, answers, and open discussion about this article, please go to http://www.nature.com/jid/journalclub
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23. Closure of a Large Chronic Wound through Transplantation of Gene-Corrected Epidermal Stem Cells
- Author
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Eva M. Murauer, Johann W. Bauer, Michele De Luca, Alessandra Recchia, Sergio Bondanza, Josef Koller, Elena Enzo, Laura De Rosa, Iris K. Gratz, Wolfgang Muss, Pamina Schlager, Graziella Pellegrini, Anja Diem, Sonia Carulli, and Elisabeth Mayr
- Subjects
0301 basic medicine ,Chronic wound ,Pathology ,medicine.medical_specialty ,Dermatology ,Biochemistry ,Viral vector ,03 medical and health sciences ,medicine ,Animals ,Skin pathology ,Gene ,Molecular Biology ,Skin ,Wound Healing ,business.industry ,Wound Closure Techniques ,Stem Cells ,Cell Biology ,Transplantation ,030104 developmental biology ,Wound Closure Technique ,Epidermal Cells ,Immunology ,Chronic Disease ,Wounds and Injuries ,Stem cell ,medicine.symptom ,Epidermis ,business ,Wound healing ,Stem Cell Transplantation - Full Text
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