24 results on '"Spectroscopy and Catalysis"'
Search Results
2. Octahedral Iron‐Acyl‐Nitrenoid Intermediates in Sulphur −Nitrogen Coupling and Hydrogen Atom Transfer Reactions
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Mònica Rodríguez, Aleksandr Y. Pereverzev, and Jana Roithová
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Inorganic Chemistry ,Organic Chemistry ,Spectroscopy and Catalysis ,Physical and Theoretical Chemistry ,Catalysis - Abstract
Contains fulltext : 293925.pdf (Publisher’s version ) (Open Access) 05 juni 2023
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- 2023
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3. Sulfonyl Nitrene and Amidyl Radical: Structure and Reactivity
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Jan Zelenka, Aleksandr Pereverzev, Ullrich Jahn, and Jana Roithová
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Electron Transport ,Azides ,Organic Chemistry ,Spectroscopy and Catalysis ,Imines ,General Chemistry ,Protons ,Catalysis ,Hydrogen - Abstract
Photocatalytic generation of nitrenes and radicals can be used to tune or even control their reactivity. Photocatalytic activation of sulfonyl azides leads to the elimination of N
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- 2022
4. Can Copper(I) and Silver(I) be Hydrogen Bond Acceptors?
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Erik Andris, Michal Straka, Jan Vrána, Aleš Růžička, Jana Roithová, and Lubomír Rulíšek
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Organic Chemistry ,Spectroscopy and Catalysis ,General Chemistry ,Catalysis - Abstract
Contains fulltext : 292790.pdf (Publisher’s version ) (Open Access)
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- 2023
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5. Enantiodivergent Sulfoxidation Catalyzed by a Photoswitchable Iron Salen Phosphate Complex
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Pieter J. Gilissen, Xiaofei Chen, Joep De Graaf, Paul Tinnemans, Ben L. Feringa, Johannes A. A. W. Elemans, Roeland J. M. Nolte, Stratingh Institute of Chemistry, and Synthetic Organic Chemistry
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Hammett plot ,Organic Chemistry ,Spectroscopy and Catalysis ,asymmetric catalysis ,photoresponsive ,Solid State Chemistry ,General Chemistry ,Physical Organic Chemistry ,Catalysis ,sulfoxidation ,supramolecular chemistry - Abstract
Here we describe a photoswitchable iron(III) salen phosphate catalyst, which is able to catalyze the enantiodivergent oxidation of prochiral aryl alkyl sulfides to chiral aryl alkyl sulfoxides. The stable (S)-axial isomer of the catalyst produced enantioenriched sulfoxides with the (R)-configuration in up to 75 % e.e., whereas the photoisomerized metastable (R)-axial isomer of the catalyst favored the formation of (S)-sulfoxides in up to 43 % e.e. The maximum Δe.e. value obtained in the enantiodivergent sulfoxidation was 118 %, which is identical to the maximum Δe.e. value that was measured in the enantiodivergent epoxidation of alkenes by a related recently described Mn1 catalyst. This iron-based catalyst broadens the scope of photoswitchable enantiodivergent catalysts and may be used in the future to develop a photoswitchable catalytic system that can write digital information on a polymer chain in the form chiral sulfoxide functions.
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- 2023
6. Computing Arithmetic Functions Using Immobilised Enzymatic Reaction Networks
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Nikita M. Ivanov, Mathieu G. Baltussen, Cristina Lía Fernández Regueiro, Max T. G. M. Derks, and Wilhelm T. S. Huck
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Spectroscopy and Catalysis ,General Chemistry ,General Medicine ,Catalysis ,Physical Organic Chemistry - Abstract
Living systems use enzymatic reaction networks to process biochemical information and make decisions in response to external or internal stimuli. Here, we present a modular and reusable platform for molecular information processing using enzymes immobilised in hydrogel beads and compartmentalised in a continuous stirred tank reactor. We demonstrate how this setup allows us to perform simple arithmetic operations, such as addition, subtraction and multiplication, using various concentrations of substrates or inhibitors as inputs and the production of a fluorescent molecule as the readout.
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- 2022
7. Do Sulfonamides Interact with Aromatic Rings?
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Roel Hammink, Jasmin Mecinović, Jie Jian, Christine J. McKenzie, F. Matthias Bickelhaupt, Jordi Poater, Chemistry and Pharmaceutical Sciences, AIMMS, and Theoretical Chemistry
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Models, Molecular ,Stereochemistry ,Drug design ,Synthetic Organic Chemistry ,010402 general chemistry ,01 natural sciences ,Catalysis ,noncovalent interactions ,Molecular recognition ,polar–pi interactions ,sulfonamides ,Spectroscopy and Catalysis ,Non-covalent interactions ,Moiety ,Theoretical Chemistry ,chemistry.chemical_classification ,Sulfonamides ,010405 organic chemistry ,Hydrogen bond ,aromatic compounds ,Organic Chemistry ,Proteins ,Aromaticity ,Hydrogen Bonding ,General Chemistry ,0104 chemical sciences ,Sulfonamide ,chemistry ,Proton affinity ,molecular recognition ,Protons - Abstract
Aromatic rings form energetically favorable interactions with many polar groups in chemical and biological systems. Recent molecular studies have shown that sulfonamides can chelate metal ions and form hydrogen bonds, however, it is presently not established whether the polar sulfonamide functionality also interacts with aromatic rings. Here, synthetic, spectroscopic, structural, and quantum chemical analyses on 2,6-diarylbenzenesulfonamides are reported, in which two flanking aromatic rings are positioned close to the central sulfonamide moiety. Fine-tuning the aromatic character by substituents on the flanking rings leads to linear trends in acidity and proton affinity of sulfonamides. This physical-organic chemistry study demonstrates that aromatic rings have a capacity to stabilize sulfonamides via through-space NH–π interactions. These results have implications in rational drug design targeting electron-rich aromatic rings in proteins.
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- 2021
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8. Mechanistic Study of Pd/NHC‐Catalyzed Sonogashira Reaction: Discovery of NHC‐Ethynyl Coupling Process
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Dmitry B. Eremin, Alexander Yu. Kostyukovich, Jana Roithová, Valentine P. Ananikov, Mariarosa Anania, Ekaterina A. Denisova, Daniil A. Boiko, Jos Oomens, Julia V. Burykina, Giel Berden, and Jonathan Martens
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FELIX Molecular Structure and Dynamics ,chemistry.chemical_classification ,Collision-induced dissociation ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,Sonogashira coupling ,Alkyne ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Bond-dissociation energy ,Catalysis ,Dissociation (chemistry) ,0104 chemical sciences ,Molecular dynamics ,Computational chemistry ,Spectroscopy and Catalysis ,Infrared multiphoton dissociation - Abstract
The product of a revealed transformation-NHC-ethynyl coupling-was observed as a catalyst transformation pathway in the Sonogashira cross-coupling, catalyzed by Pd/NHC complexes. The 2-ethynylated azolium salt was isolated in individual form and fully characterized, including X-ray analysis. A number of possible intermediates of this transformation with common formulae (NHC)n Pd(C2 Ph) (n=1,2) were observed and subjected to collision-induced dissociation (CID) and infrared multiphoton dissociation (IRMPD) experiments to elucidate their structure. Measured bond dissociation energies (BDEs) and IRMPD spectra were in an excellent agreement with quantum calculations for coupling product π-complexes with Pd0 . Molecular dynamics simulations confirmed the observed multiple CID fragmentation pathways. An unconventional methodology to study catalyst evolution suggests the reported transformation to be considered in the development of new catalytic systems for alkyne functionalization reactions.
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- 2020
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9. Binding Interactions in Copper, Silver and Gold pi-Complexes
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Jaya Mehara, Brandon T. Watson, Anurag Noonikara‐Poyil, Adway O. Zacharias, Jana Roithová, and H. V. Rasika Dias
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Silver ,Organic Chemistry ,Spectroscopy and Catalysis ,Gold ,General Chemistry ,Crystallography, X-Ray ,Ligands ,Copper ,Catalysis - Abstract
The copper(I), silver(I), and gold(I) metals bind π-ligands by σ-bonding and π-back bonding interactions. These interactions were investigated using bidentate ancillary ligands with electron donating and withdrawing substituents. The π-ligands span from ethylene to larger terminal and internal alkenes and alkynes. Results of X-ray crystallography, NMR, and IR spectroscopy and gas phase experiments show that the binding energies increase in the order AgCuAu and the binding energies are slightly higher for alkynes than for alkenes. Modulation of the electron density at the metal using substituents on the ancillary ligands shows that the π-back bonding interaction plays a dominant role for the binding in the copper and gold complexes.
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- 2022
10. Cationic Gold(II) Complexes: Experimental and Theoretical Study
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Jaya Mehara, Adarsh Koovakattil Surendran, Teun van Wieringen, Deeksha Setia, Cina Foroutan‐Nejad, Michal Straka, Lubomír Rulíšek, and Jana Roithová
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Halogens ,Nitrogen ,Cations ,Organic Chemistry ,Spectroscopy and Catalysis ,Gold ,General Chemistry ,Models, Theoretical ,Ligands ,Crystallography, X-Ray ,Copper ,Catalysis - Abstract
Gold(II) complexes are rare and their application for catalysis of chemical transformations is unexplored. The reason is their easy oxidation or reduction to the more stable gold(III) or gold(I) complexes, respectively. We explored the thermodynamics of the formation of the [(L)AuIIX]+ complexes (L = ligand, X = halogen) from their gold(III) precursors and investigated the stability and the spectral properties in the IR and VIS range of the formed gold(II) complexes in the gas phase. The results show that the best ancillary ligands L for stabilizing gaseous [(L)AuIIX]+ complexes are bidentate and tridentate ligands with nitrogen donor atoms. The electronic structure and spectral properties of the investigated gold(II) complexes were correlated with the quantum chemical calculations. The results show that the molecular and electronic structure of the gold(II) complexes as well as their spectroscopic properties are very similar to the analogous stable copper(II) complexes.
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- 2022
11. Monitoring Reaction Intermediates to Predict Enantioselectivity Using Mass Spectrometry
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Roelant Hilgers, Sin Yong Teng, Anamarija Briš, Aleksandr Y. Pereverzev, Paul White, Jeroen J. Jansen, and Jana Roithová
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asymmetric catalysis ,ion mobility mass spectrometry ,kinetics ,organocatalysis ,reactive intermediates ,Asymmetric Catalysis ,Reactive Intermediates ,Aldehydes ,Food Chemistry ,Organocatalysis ,Stereoisomerism ,General Chemistry ,General Medicine ,Synthetic Organic Chemistry ,Catalysis ,Mass Spectrometry ,Analytical Chemistry ,Kinetics ,Ion Mobility Spectrometry ,Levensmiddelenchemie ,Spectroscopy and Catalysis ,Ethers ,VLAG - Abstract
Enantioselective reactions are at the core of chemical synthesis. Their development mostly relies on prior knowledge, laborious product analysis and post-rationalization by theoretical methods. Here, we introduce a simple and fast method to determine enantioselectivities based on mass spectrometry. The method is based on ion mobility separation of diastereomeric intermediates, formed from a chiral catalyst and prochiral reactants, and delayed reactant labeling experiments to link the mass spectra with the reaction kinetics in solution. The data provide rate constants along the reaction paths for the individual diastereomeric intermediates, revealing the origins of enantioselectivity. Using the derived kinetics, the enantioselectivity of the overall reaction can be predicted. Hence, this method can offer a rapid discovery and optimization of enantioselective reactions in the future. We illustrate the method for the addition of cyclopentadiene (CP) to an α, β-unsaturated aldehyde catalyzed by a diarylprolinol silyl ether.
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- 2022
12. Monoaurated vs. diaurated intermediates: causality or independence?†
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Jana Roithová, Mariarosa Anania, Juraj Jašík, Elena Shcherbachenko, Jan Zelenka, and Lucie Jašíková
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chemistry.chemical_classification ,Reaction mechanism ,Ketone ,010405 organic chemistry ,Chemistry ,Kinetics ,Photodissociation ,Protonation ,General Chemistry ,010402 general chemistry ,Photochemistry ,01 natural sciences ,3. Good health ,0104 chemical sciences ,Catalysis ,Reaction rate ,Kinetic isotope effect ,Spectroscopy and Catalysis - Abstract
Diaurated intermediates of gold-catalysed reactions have been a long-standing subject of debate. Although diaurated complexes were regarded as a drain of active monoaurated intermediates in catalytic cycles, they were also identified as the products of gold–gold cooperation in dual–activation reactions. This study shows investigation of intermediates in water addition to alkynes catalysed by [(IPr)Au(CH3CN)(BF4)]. Electrospray ionisation mass spectrometry (ESI-MS) allowed us to detect both monoaurated and diaurated complexes in this reaction. Infrared photodissociation spectra of the trapped complexes show that the structure of the intermediates corresponds to α-gold ketone intermediates protonated or aurated at the oxygen atom. Delayed reactant labelling experiments provided the half life of the intermediates in reaction of 1-phenylpropyne (∼7 min) and the kinetic isotope effects for hydrogen introduction to the carbon atom (KIE ∼ 4–6) and for the protodeauration (KIE ∼ 2). The results suggest that the ESI-MS detected monoaurated and diaurated complexes report on species with a very similar or the same kinetics in solution. Kinetic analysis of the overall reaction showed that the reaction rate is first-order dependent on the concentration of the gold catalyst. Finally, all results are consistent with the reaction mechanism proceeding via monoaurated neutral α-gold ketone intermediates only., Reaction kinetics and detected α-gold ketone intermediates reveal that gold-mediated hydration of alkynes does not rely on dual activation.
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- 2019
13. Characterized cis-FeV(O)(OH) intermediate mimics enzymatic oxidations in the gas phase
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Erik Andris, Jana Roithová, Rafael Navrátil, Margarida Borrell, and Miquel Costas
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0301 basic medicine ,Oxygenase ,Stereochemistry ,Iron ,Science ,Catalitzadors ,Reactive intermediate ,General Physics and Astronomy ,Context (language use) ,02 engineering and technology ,Article ,Catalysis ,General Biochemistry, Genetics and Molecular Biology ,Bioinorganic chemistry ,Chemistry, Physical and theoretical ,03 medical and health sciences ,Spectroscopy and Catalysis ,Reactivity (chemistry) ,lcsh:Science ,chemistry.chemical_classification ,Multidisciplinary ,Catalysts ,General Chemistry ,Química bioinorgànica ,021001 nanoscience & nanotechnology ,3. Good health ,respiratory tract diseases ,030104 developmental biology ,Enzyme ,chemistry ,Dihydroxylation ,Oxygenases ,lcsh:Q ,0210 nano-technology ,Oxidation-Reduction ,Iron Compounds ,Fisicoquímica - Abstract
FeV(O)(OH) species have long been proposed to play a key role in a wide range of biomimetic and enzymatic oxidations, including as intermediates in arene dihydroxylation catalyzed by Rieske oxygenases. However, the inability to accumulate these intermediates in solution has thus far prevented their spectroscopic and chemical characterization. Thus, we use gas-phase ion spectroscopy and reactivity analysis to characterize the highly reactive [FeV(O)(OH)(5tips3tpa)]2+ (32+) complex. The results show that 32+ hydroxylates C–H bonds via a rebound mechanism involving two different ligands at the Fe center and dihydroxylates olefins and arenes. Hence, this study provides a direct evidence of FeV(O)(OH) species in non-heme iron catalysis. Furthermore, the reactivity of 32+ accounts for the unique behavior of Rieske oxygenases. The use of gas-phase ion characterization allows us to address issues related to highly reactive intermediates that other methods are unable to solve in the context of catalysis and enzymology., FeV(O)(OH) species have long been thought to play a role in a range of enzymatic oxidations, but their characterization has remained elusive. Here, using gas-phase ion spectroscopy, the authors characterize an FeV(O)(OH) species and find that its reactivity mimics that of Rieske oxygenases.
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- 2019
14. Closed Shell Iron(IV) Oxo Complex with an Fe-O Triple Bond: Computational Design, Synthesis, and Reactivity
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Jana Roithová, Koen Segers, Jaya Mehara, Lubomír Rulíšek, and Erik Andris
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ligand design ,010402 general chemistry ,01 natural sciences ,Catalysis ,iron oxo complexes ,Iron Oxo Complexes | Hot Paper ,Spectroscopy and Catalysis ,Reactivity (chemistry) ,Singlet state ,Open shell ,Research Articles ,010405 organic chemistry ,Chemistry ,Ligand ,Bond strength ,spin state ,General Medicine ,General Chemistry ,Antibonding molecular orbital ,Triple bond ,3. Good health ,0104 chemical sciences ,Crystallography ,ion spectroscopy ,Unpaired electron ,Research Article - Abstract
Iron(IV)‐oxo intermediates in nature contain two unpaired electrons in the Fe–O antibonding orbitals, which are thought to contribute to their high reactivity. To challenge this hypothesis, we designed and synthesized closed‐shell singlet iron(IV) oxo complex [(quinisox)Fe(O)]+ (1+; quinisox‐H=(N‐(2‐(2‐isoxazoline‐3‐yl)phenyl)quinoline‐8‐carboxamide). We identified the quinisox ligand by DFT computational screening out of over 450 candidates. After the ligand synthesis, we detected 1+ in the gas phase and confirmed its spin state by visible and infrared photodissociation spectroscopy (IRPD). The Fe–O stretching frequency in 1+ is 960.5 cm−1, consistent with an Fe–O triple bond, which was also confirmed by multireference calculations. The unprecedented bond strength is accompanied by high gas‐phase reactivity of 1+ in oxygen atom transfer (OAT) and in proton‐coupled electron transfer reactions. This challenges the current view of the spin‐state driven reactivity of the Fe–O complexes., An iron oxo complex with an Fe≡O bond and a closed shell ground state was designed by employing DFT calculations, synthesized, and experimentally characterized by gas‐phase spectroscopic techniques. Despite the unprecedented Fe≡O bond strength and closed‐shell ground state, it still exhibits high‐reactivity.
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- 2020
15. Copper Arylnitrene Intermediates: Formation, Structure and Reactivity
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Jana Roithová and Noël R. M. de Kler
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010405 organic chemistry ,Chemistry ,Ethanethiol ,Ligand ,Nitrene ,Metals and Alloys ,chemistry.chemical_element ,General Chemistry ,010402 general chemistry ,Photochemistry ,01 natural sciences ,Copper ,Catalysis ,3. Good health ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,chemistry.chemical_compound ,Pyridine ,Spectroscopy and Catalysis ,Materials Chemistry ,Ceramics and Composites ,Moiety ,Reactivity (chemistry) ,Amine gas treating - Abstract
The mechanism of oxidation of arylamines by copper enzymes is not clarified yet. Here, we explored a reaction between a possible high-valent copper(II)-oxyl intermediate and arylamine. We have employed a TPA ligand (TPA = tris(2-pyridylmethyl)amine) with the NH2 group in position 2 of one of the pyridine rings (TPANH2). This model system allows generation of [(TPANH2)Cu(O)]+ in the gas phase, which immediately undergoes a reaction between the arylamino group and the copper oxyl moiety. The reaction leads to elimination of H2O and formation of a copper–nitrene complex. The structure of the resulting copper–nitrene complex was confirmed by infrared spectroscopy in the gas phase. We show that the copper–nitrene complex reacts by hydrogen atom transfer with 1,4-cyclohexadiene and by an order of magnitude faster by a double hydrogen atom transfer with ethanethiol and methanol. DFT calculations explain the formation of the copper nitrene as well as its reactivity in agreement with the experimental findings.
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- 2020
16. Nucleophilic versus Electrophilic Reactivity of Bioinspired Superoxido Nickel(II) Complexes
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Matthias Driess, Bhawana Pandey, Erik Andris, Teresa Corona, S. Künstner, Chakadola Panda, Jana Roithová, Erik R. Farquhar, Somenath Garai, Kallol Ray, Nils Lindenmaier, Gopalan Rajaraman, and Anirban Chandra
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Models, Molecular ,chemistry.chemical_element ,Salt (chemistry) ,Lithium ,010402 general chemistry ,01 natural sciences ,Medicinal chemistry ,Catalysis ,Nucleophile ,Coordination Complexes ,Nickel ,Superoxides ,Spectroscopy and Catalysis ,Struktur aktivitats beziehungen ,Reactivity (chemistry) ,chemistry.chemical_classification ,010405 organic chemistry ,General Medicine ,General Chemistry ,0104 chemical sciences ,Oxygen ,chemistry ,Electrophile ,Oxygenases ,Quantum Theory ,Salts ,Oxidoreductases ,Ground state ,Oxidation-Reduction - Abstract
The formation and detailed spectroscopic characterization of the first biuret-containing monoanionic superoxido-NiII intermediate [LNiO2 ]- as the Li salt [2; L=MeN[C(=O)NAr)2 ; Ar=2,6-iPr2 C6 H3 )] is reported. It results from oxidation of the corresponding [Li(thf)3 ]2 [LNiII Br2 ] complex M with excess H2 O2 in the presence of Et3 N. The [LNiO2 ]- core of 2 shows an unprecedented nucleophilic reactivity in the oxidative deformylation of aldehydes, in stark contrast to the electrophilic character of the previously reported neutral Nacnac-containing superoxido-NiII complex 1, [L'NiO2 ] (L'=CH(CMeNAr)2 ). According to density-functional theory (DFT) calculations, the remarkably different behaviour of 1 versus 2 can be attributed to their different charges and a two-state reactivity, in which a doublet ground state and a nearby spin-polarized doublet excited-state both contribute in 1 but not in 2. The unexpected nucleophilicity of the superoxido-NiII core of 2 suggests that such a reactivity may also play a role in catalytic cycles of Ni-containing oxygenases and oxidases.
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- 2018
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17. Flavinium Catalysed Photooxidation: Detection and Characterization of Elusive Peroxyflavinium Intermediates
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Jan Zelenka, Jana Roithová, and Radek Cibulka
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Spectrometry, Mass, Electrospray Ionization ,Radical ,Reaction intermediate ,Flavin group ,Alkylation ,Photochemistry ,010402 general chemistry ,01 natural sciences ,Catalysis ,Electron Transport ,Electron transfer ,Flavins ,Spectroscopy and Catalysis ,Research Articles ,mass spectrometry ,Chemistry ,010405 organic chemistry ,photooxidation ,Photodissociation ,General Chemistry ,General Medicine ,Hydrogen Peroxide ,flavin ,0104 chemical sciences ,Microsecond ,ion spectroscopy ,peroxy intermediates ,Lasers, Semiconductor ,Protons ,Photooxidation | Very Important Paper ,Oxidation-Reduction ,Research Article - Abstract
Flavin‐based catalysts are photoactive in the visible range which makes them useful in biology and chemistry. Herein, we present electrospray‐ionization mass‐spectrometry detection of short‐lived intermediates in photooxidation of toluene catalysed by flavinium ions (Fl+). Previous studies have shown that photoexcited flavins react with aromates by proton‐coupled electron transfer (PCET) on the microsecond time scale. For Fl+, PCET leads to FlH.+ with the H‐atom bound to the N5 position. We show that the reaction continues by coupling between FlH.+ and hydroperoxy or benzylperoxy radicals at the C4a position of FlH.+. These results demonstrate that the N5‐blocking effect reported for alkylated flavins is also active after PCET in these photocatalytic reactions. Structures of all intermediates were fully characterised by isotopic labelling and by photodissociation spectroscopy. These tools provide a new way to study reaction intermediates in the sub‐second time range., Active site switch occurred after N5‐hydrogen blocking which resulted from proton coupled electron transfer. The short‐lived peroxy‐flavinium reaction intermediates were characterised by mass spectrometry and ion spectroscopy. Although the effect of N5‐hydrogen blocking was predicted more than 40 years ago, this is the first direct evidence.
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- 2019
18. M-O Bonding Beyond the Oxo Wall: Spectroscopy and Reactivity of Cobalt(III)-Oxyl and Cobalt(III)-Oxo Complexes
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Jana Roithová, Rafael Navrátil, Monica Rodriguez, Juraj Jašík, Martin Srnec, Miquel Costas, Erik Andris, and Ministerio de Economía y Competitividad (Espanya)
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Reactive intermediate ,chemistry.chemical_element ,010402 general chemistry ,01 natural sciences ,7. Clean energy ,Medicinal chemistry ,C−H activation ,Catalysis ,Metal ,Transition metal ,Catàlisi ,Spectroscopy and Catalysis ,Reactivity (chemistry) ,cobalt-oxo complexes ,helium tagging ,Spectroscopy ,Research Articles ,Mass spectrometry ,010405 organic chemistry ,Chemistry ,Enllaços químics ,Photodissociation ,Chemical bonds ,Activació (Química) ,General Medicine ,General Chemistry ,iron-oxo complexes ,oxo wall ,0104 chemical sciences ,Bonding Analysis ,ion spectroscopy ,Espectrometria de masses ,Activation (Chemistry) ,visual_art ,Metalls de transició -- Compostos ,visual_art.visual_art_medium ,Cobalt ,Transition metal compounds ,Research Article - Abstract
Aquest mateix article està publicat a l'edició alemanya d''Angewandte Chemie' (ISSN 0044-8249, EISSN 1521-3757), 2019, vol.131, núm. 28, p. 9721-9726. DOI https://doi.org/10.1002/ange.201904546 Terminal oxo complexes of late transition metals are frequently proposed reactive intermediates. However, they are scarcely known beyond Group 8. Using mass spectrometry, we prepared and characterized two such complexes: [(N4Py)CoIII(O)]+ (1) and [(N4Py)CoIV(O)]2+ (2). Infrared photodissociation spectroscopy revealed that the Co−O bond in 1 is rather strong, in accordance with its lack of chemical reactivity. On the contrary, 2 has a very weak Co−O bond characterized by a stretching frequency of ≤659 cm−1. Accordingly, 2 can abstract hydrogen atoms from non-activated secondary alkanes. Previously, this reactivity has only been observed in the gas phase for small, coordinatively unsaturated metal complexes. Multireference ab-initio calculations suggest that 2, formally a cobalt(IV)-oxo complex, is best described as cobalt(III)-oxyl. Our results provide important data on changes to metal-oxo bonding behind the oxo wall and show that cobalt-oxo complexes are promising targets for developing highly active C−H oxidation catalysts The project was funded by the European Research Council (ERC CoG No. 682275), the Czech Ministry of Education, Youth and Sports (LTAUSA17026), the COST action ECOSTBio, MINECO of Spain (CTQ2015‐70795‐P), the Catalan DIUE of the Generalitat de Catalunya (2017SGR01378, a BFI PhD grant to M.R., and an ICREA‐Academia award), and the Grant Agency of the Czech Republic (Grant No. 18‐13093S)
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- 2019
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19. Spectroscopic and Computational Evidence of Intramolecular (AuH+)-H-I-N Hydrogen Bonding
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Aleš Růžička, Jan Vícha, Jana Roithová, Lubomír Rulíšek, Michal Straka, and Erik Andris
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Materials science ,010405 organic chemistry ,Infrared ,Hydrogen bond ,Photodissociation ,Protonation ,General Chemistry ,Interaction energy ,010402 general chemistry ,01 natural sciences ,Catalysis ,0104 chemical sciences ,Crystallography ,chemistry.chemical_compound ,chemistry ,Chemical bond ,Intramolecular force ,Spectroscopy and Catalysis ,Carbene - Abstract
Despite substantial evidence of short Au⋅⋅⋅H-X contacts derived from a number of X-ray structures of AuI compounds, the nature of AuI ⋅⋅⋅H bonding in these systems has not been clearly understood. Herein, we present the first spectroscopic evidence for an intramolecular AuI ⋅⋅⋅H+ -N hydrogen bond in a [Cl-Au-L]+ complex, where L is a protonated N-heterocyclic carbene. The complex was isolated in the gas phase and characterized with helium-tagging infrared photodissociation (IRPD) spectra, in which H+ -N-mode-derived bands evidence the intramolecular AuI ⋅⋅⋅H+ -N bond. Quantum chemical calculations reproduce the experimental IRPD spectra and allow to characterize the intramolecular Au⋅⋅⋅H+ -N bonding with a short rAu⋅⋅⋅H distance of 2.17 A and an interaction energy of approximately -10 kcal mol-1 . Various theoretical descriptors of chemical bonding calculated for the Au⋅⋅⋅H+ -N interaction provide strong evidence for a hydrogen bond of moderate strength.
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- 2019
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20. C–H Funkcionalizace karboxyláty palladia: efekt kyseliny
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Jan Bartáček, Miloš Sedlák, Jana Roithová, Jiří Váňa, and Jiří Hanusek
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inorganic chemicals ,C-H functionalizations ,Carboxylic acid ,chemistry.chemical_element ,Protonation ,010402 general chemistry ,01 natural sciences ,Catalysis ,chemistry.chemical_compound ,Palladium carboxylates ,karboxylové kyseliny ,Spectroscopy and Catalysis ,Carboxylate ,Reaction conditions ,chemistry.chemical_classification ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,Substrate (chemistry) ,Karboxyláty palladia ,C–H funkcionalizace ,Combinatorial chemistry ,0104 chemical sciences ,Surface modification ,carboxylic acid ,Palladium - Abstract
Finding optimal reaction conditions is usually complex, requires many experiments, and is therefore demanding in terms of human, financial, and environmental resources. This work provides a simple workflow for easier design of popular palladium-catalyzed C−H functionalization reactions, where the active palladium catalysts contain carboxylate ligands. The key factor for optimizing reaction conditions is to find a balance between two opposing effects of the carboxylic acid in the reaction mixture: generation of more reactive palladium catalyst versus deactivation of a substrate by its protonation. Hledání optimální reakčních podmínek je obecně komplikované a vyžaduje mnoho experimentů a je také spojeno s nároky na lidské, finanční a environmentální zdroje. Tato práce poskytuje jednoduchý postup pro snažší návrh populárních palladiem katalyzovaných C–H funkcionalizačních reakcí, v nichž aktivní katalyzátory palladia obsahují karboxylátové ligandy. Klíčovým faktorem pro optimalizační podmínky je nalézt rovnováhu mezi dvěma protichůdnými účinky karboxylové kyseliny v reakční směsi: tvorba více reaktivního katalyzátoru palladia vs. deaktivace substrátu protonací.
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- 2019
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21. Experimentally Calibrated Analysis of the Electronic Structure of CuO+: Implications for Reactivity
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Jana Roithová, Rafael Navrátil, Martin Srnec, Erik Andris, and Juraj Jašík
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Materials science ,010405 organic chemistry ,Photodissociation ,chemistry.chemical_element ,General Chemistry ,Electronic structure ,010402 general chemistry ,01 natural sciences ,Copper ,Catalysis ,Spectral line ,0104 chemical sciences ,3. Good health ,Ion ,Crystallography ,chemistry ,Spectroscopy and Catalysis ,Reactivity (chemistry) ,Absorption (chemistry) ,Spectroscopy - Abstract
The CuO+ core is a central motif of reactive intermediates in copper-catalysed oxidations occurring in nature. The high reactivity of CuO+ stems from a weak bonding between the atoms, which cannot be described by a simple classical model. To obtain the correct picture, we have investigated the acetonitrile-ligated CuO+ ion using neon-tagging photodissociation spectroscopy at 5 K. The spectra feature complex vibronic absorption progressions in NIR and visible regions. Employing Franck-Condon analyses, we derived low-lying triplet potential energy surfaces that were further correlated with multireference calculations. This provided insight into the ground and low-lying excited electronic states of the CuO+ unit and elucidated how these states are perturbed by the change in ligation. Thus, we show that the bare CuO+ ion has prevailingly a copper(I)-biradical oxygen character. Increasing the number of ligands coordinated to copper changes the CuO+ character towards the copper(II)-oxyl radical structure.
- Published
- 2018
22. Trapping Iron(III)-Oxo Species at the Boundary of the 'Oxo Wall': Insights into the Nature of the Fe(III)-O Bond
- Author
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Mayank Puri, Miquel Costas, Juraj Jašík, Erik Andris, Jana Roithová, Rafael Navrátil, and Lawrence Que
- Subjects
Spin states ,010405 organic chemistry ,Hydrogen bond ,Chemistry ,General Chemistry ,Electron ,010402 general chemistry ,Antibonding molecular orbital ,01 natural sciences ,Biochemistry ,Bond order ,Catalysis ,0104 chemical sciences ,Crystallography ,Colloid and Surface Chemistry ,Atomic orbital ,Spectroscopy and Catalysis ,Reactivity (chemistry) ,Spin (physics) - Abstract
Terminal non-heme iron(IV)-oxo compounds are among the most powerful and best studied oxidants of strong C-H bonds. In contrast to the increasing number of such complexes (>80 thus far), corresponding one-electron-reduced derivatives are much rarer and presumably less stable, and only two iron(III)-oxo complexes have been characterized to date, both of which are stabilized by hydrogen-bonding interactions. Herein we have employed gas-phase techniques to generate and identify a series of terminal iron(III)-oxo complexes, all without built-in hydrogen bonding. Some of these complexes exhibit ∼70 cm-1 decrease in ν(Fe-O) frequencies expected for a half-order decrease in bond order upon one-electron reduction to an S = 5/2 center, while others have ν(Fe-O) frequencies essentially unchanged from those of their parent iron(IV)-oxo complexes. The latter result suggests that the added electron does not occupy a d orbital with Fe═O antibonding character, requiring an S = 3/2 spin assignment for the nascent FeIII-O- species. In the latter cases, water is found to hydrogen bond to the FeIII-O- unit, resulting in a change from quartet to sextet spin state. Reactivity studies also demonstrate the extraordinary basicity of these iron(III)-oxo complexes. Our observations show that metal-oxo species at the boundary of the "Oxo Wall" are accessible, and the data provide a lead to detect iron(III)-oxo intermediates in biological and biomimetic reactions.
- Published
- 2018
23. Silver(I)-Catalyzed C-X, C-C, C-N, and C-O Cross-Couplings Using Aminoquinoline Directing Group via Elusive Aryl-Ag(III) Species
- Author
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Màrius Tarrés, Erik Andris, Anamarija Briš, Steven Roldán-Gómez, Lorena Capdevila, Jana Roithová, and Xavi Ribas
- Subjects
silver ,cross-coupling ,two-electron redox catalysis ,mass spectrometry ,infrared photodissociation spectroscopy ,010405 organic chemistry ,Chemistry ,Aryl ,Organic Chemistry ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Oxidative addition ,Redox ,Catalysis ,0104 chemical sciences ,Aminoquinoline ,chemistry.chemical_compound ,Catalytic cycle ,Nucleophile ,Polymer chemistry ,medicine ,Spectroscopy and Catalysis ,Organic synthesis ,medicine.drug - Abstract
Cross-coupling transformations are a powerful tool in organic synthesis. It is known that this kind of transformation undergoes 2- electron redox processes, and, for this reason, silver has been nearly forgotten as catalyst for cross-couplings because silver is mainly considered as a 1-electron redox metal. Herein, we disclose effective Ag(I)-catalyzed cross- coupling transformations using bidentate aminoquinoline as a directing group toward different nucleophiles to form C−C, C−N, and C−O bonds. DFT calculations indicate the feasible oxidative addition of L1-I substrate via the Ag(I)/Ag(III) catalytic cycle. Furthermore, ion spectroscopy experiments suggest a highly reactive aryl-Ag(III) that in the absence of nucleophiles reacts to form an intermolecular cyclic product [5d-Ag(I)-CH3CN], which in solution forms 5a. This work proves that silver can undergo 2-electron redox processes in cross-coupling reactions like Pd and Cu.
- Published
- 2018
24. Tuning the H‐Atom Transfer Reactivity of Iron(IV)‐Oxo Complexes as Probed by Infrared Photodissociation Spectroscopy
- Author
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Guilherme L. Tripodi, Lawrence Que, Magda M. J. Dekker, and Jana Roithová
- Subjects
Tris ,Infrared ,reactivity screening ,iron-oxo ,010402 general chemistry ,01 natural sciences ,Catalysis ,C−H activation ,Adduct ,chemistry.chemical_compound ,Hydrogen Atom Transfer | Very Important Paper ,Spectroscopy and Catalysis ,Reactivity (chemistry) ,Spectroscopy ,Research Articles ,mass spectrometry ,Ligand ,010405 organic chemistry ,Photodissociation ,General Chemistry ,General Medicine ,3. Good health ,0104 chemical sciences ,Crystallography ,ion spectroscopy ,chemistry ,Amine gas treating ,Research Article - Abstract
Reactivities of non‐heme iron(IV)‐oxo complexes are mostly controlled by the ligands. Complexes with tetradentate ligands such as [(TPA)FeO]2+ (TPA=tris(2‐pyridylmethyl)amine) belong to the most reactive ones. Here, we show a fine‐tuning of the reactivity of [(TPA)FeO]2+ by an additional ligand X (X=CH3CN, CF3SO3 −, ArI, and ArIO; ArI=2‐(tBuSO2)C6H4I) attached in solution and reveal a thus far unknown role of the ArIO oxidant. The HAT reactivity of [(TPA)FeO(X)]+/2+ decreases in the order of X: ArIO > MeCN > ArI ≈ TfO−. Hence, ArIO is not just a mere oxidant of the iron(II) complex, but it can also increase the reactivity of the iron(IV)‐oxo complex as a labile ligand. The detected HAT reactivities of the [(TPA)FeO(X)]+/2+ complexes correlate with the Fe=O and FeO−H stretching vibrations of the reactants and the respective products as determined by infrared photodissociation spectroscopy. Hence, the most reactive [(TPA)FeO(ArIO)]2+ adduct in the series has the weakest Fe=O bond and forms the strongest FeO−H bond in the HAT reaction., The reaction kinetics of H‐atom transfer mediated by iron(IV)oxo complexes with different cis‐ligands can be studied in a modular flow reactor coupled to MS detection. The HAT reactivity correlates with the intrinsic properties of the isolated complexes in the gas phase. A ligand with a larger binding energy forms a more reactive complex for the HAT reactions, has a weaker FeIV=O bond, and forms a stronger FeIIIO−H bond after the HAT reaction.
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