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Planctomycetes are ubiquitous and environmentally important Gram-negative aquatic bacteria with key roles in global carbon and nitrogen cycles. Many planctomycetal species have a pink or orange colour and have been suggested to produce carotenoids. Potential applications as food colorants or anti-oxidants have been proposed. Hitherto, the planctomycetal metabolism is largely unexplored and the strain pigmentation has not been explored. For a holistic view of the complex planctomycetal physiology, we analysed carotenoid profiles of the pink-pigmented strain Rhodopirellula rubra LF2 T and of the orange strain Rubinisphaera brasiliensis Gr7. During LC-MS/MS analysis of culture extracts, we could identify three saproxanthin-type carotenoids including a rare C 45 carotenoid. These compounds, saproxanthin, dehydroflexixanthin and 2'-isopentenyldehydrosaproxanthin, derive from the common carotenoid precursor lycopene and are characterized by related end groups, namely a 3-hydroxylated β-carotene-like cyclohexene ring as one end group and simple hydration on the other end of the molecule. Based on the observed molecule structure we present putative pathways for their biosynthesis. Results support Planctomycetes as a promising, yet mostly untapped source of carotenoids., (© 2019 Society for Applied Microbiology and John Wiley & Sons Ltd.)

Carotenoids in cyanobacteria play an important role in protecting against and in repairing damage against low level UV-B radiation. Here we use transcriptomics and metabolomic HPLC pigment analysis to compare carotenoid pathway regulation in the filamentous cyanobacterium Chlorogloeopsis fritschii PCC 6912 exposed to white light and to white light supplemented with low level UV-B. Under UV-B changes in carotenoid transcription regulation were found associated with carotenogenesis (carotenoid synthesis), photoprotection and carotenoid cleavage. Transcriptional regulation was reflected in corresponding pigment signatures. All carotenogenesis pathway genes from geranylgeranyl-diphosphate to lycopene were upregulated. There were significant increases in expression of gene homologs (crtW , crtR , cruF , and cruG) associated with routes to ketolation to produce significant increases in echinenone and canthaxanthin concentrations. There were gene homologs for four β-carotene-ketolases (crtO and crtW) present but only one crtW was upregulated. Putative genes encoding enzymes (CruF, CrtR, and CruG) for the conversion of γ-carotene to myxol 2′-methylpentoside were upregulated. The hydroxylation pathway to nostaxanthin via zeaxanthin and caloxanthin (gene homologs for CrtR and CrtG) were not upregulated, reflected in the unchanged corresponding pigment concentrations in zeaxanthin, caloxanthin and nostaxanthin, Transcripts for the non-photochemical quenching related Orange-Carotenoid-Protein (OCP) and associated Fluoresence-Recovery-Protein (FRP) associated with photoprotection were upregulated, and one carotenoid binding Helical-Carotenoid-Protein (HCP) gene homolog was downregulated. Multiple copies of genes encoding putative apocarotenoid related carotenoid oxygenases responsible for carotenoid cleavage were identified, including an upregulated apo-β-carotenal-oxygenase gene homologous to a retinal producing enzyme. Our study provides holistic insight into the photoregulatory processes that modulate the synthesis, photoprotection and cleavage of carotenoids in cyanobacterial cells exposed to low level UV-B. This is important to understanding how regulation of metabolism responds to a changing environment and how metabolism can be modulated for biotechnological purposes. [ABSTRACT FROM AUTHOR]

Summary: Planctomycetes are ubiquitous and environmentally important Gram‐negative aquatic bacteria with key roles in global carbon and nitrogen cycles. Many planctomycetal species have a pink or orange colour and have been suggested to produce carotenoids. Potential applications as food colorants or anti‐oxidants have been proposed. Hitherto, the planctomycetal metabolism is largely unexplored and the strain pigmentation has not been explored. For a holistic view of the complex planctomycetal physiology, we analysed carotenoid profiles of the pink‐pigmented strain Rhodopirellula rubra LF2T and of the orange strain Rubinisphaera brasiliensis Gr7. During LC–MS/MS analysis of culture extracts, we could identify three saproxanthin‐type carotenoids including a rare C45 carotenoid. These compounds, saproxanthin, dehydroflexixanthin and 2′‐isopentenyldehydrosaproxanthin, derive from the common carotenoid precursor lycopene and are characterized by related end groups, namely a 3‐hydroxylated β‐carotene‐like cyclohexene ring as one end group and simple hydration on the other end of the molecule. Based on the observed molecule structure we present putative pathways for their biosynthesis. Results support Planctomycetes as a promising, yet mostly untapped source of carotenoids. [ABSTRACT FROM AUTHOR]

A new atmospheric pressure chemical ionization mass spectrometry (APCI-LC/MS) method improved detection and aided characterization of fucoxanthin related carotenoids, revealing the coccolithophorid Emiliania huxleyi (Lohm.) Hay et Mohler (strain MBA 92, Plymouth) to contain a wider range of acyloxyfucoxanthins than reported previously. The diversity is confirmed as arising from differences in the length of the alkanoic acid substituent esterified at position C-19′. Acyloxyfucoxanthins with substituents of between four and eight carbons at the C-19′ position have been detected in a culture of Emiliania huxleyi, where previously only 19′-butanoyloxyfucoxanthin and 19′-hexanoyloxyfucoxanthin have been reported in the literature. Novel fucoxanthinol derivatives were also found. The detection of these novel carotenoids in Emiliania huxleyi permits detailed studies of the impact of environmental factors on individual components of the complex pool of fucoxanthin-type carotenoids in this organism. [ABSTRACT FROM AUTHOR]

Abstract: We report the response of carotenoids and chlorophylls during 120 h time series virus infection experiments of the marine coccolithophorid Emiliania huxleyi (Lohm.) Hay et Mohler culture. The response of individual carotenoids to infection varied: Diatoxanthin (Dtx) increased rapidly relative to chlorophyll-a, whereas diadinoxanthin (Ddx) and β-carotene showed a rapid decrease and fucoxanthin and 19′hexanoyloxyfucoxanthin a slight increase. The response of the individual carotenoids reflects their role in epoxy/de-epoxidation cycling, antioxidant protection, biosynthetic conversion and vulnerability to photooxidative destruction. We observed for the first time the operation of the diadinoxanthin cycle occurring in response to viral infection in E. huxleyi with the de-epoxidation ratio (Dtx/(Dtx+Ddx)) increasing exponentially with time (R 2 =0.92) and decreasing exponentially with F V / F M (R 2 =0.97). Our findings contribute to our understanding of the conversion and fate of key biochemical cell constituents in algae and are important in understanding the physiological stress response to virus infection. [Copyright &y& Elsevier]