1. Interplay and cooperation between SREBF1 and master transcription factors regulate lipid metabolism and tumor-promoting pathways in squamous cancer
- Author
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Xiu E. Xu, Allen S. Ho, De-Chen Lin, Qian Yang, Wei Yang, Xiang Li, Li Yan Xu, Ying Zhang, Zachary S. Zumsteg, Stephen J. Meltzer, Melissa J. Fullwood, Bo Zhou, Stephen J. Freedland, Yuan Jiang, Masaharu Hazawa, En Min Li, Ming Rong Wang, Guowei Huang, H. Phillip Koeffler, Li Yan Li, Yan-Yi Jiang, Sigal Gery, and Ling-Wen Ding
- Subjects
0301 basic medicine ,Epigenomics ,Lung Neoplasms ,Esophageal Neoplasms ,General Physics and Astronomy ,Histones ,0302 clinical medicine ,Cell Movement ,Tandem Mass Spectrometry ,Squamous cell carcinoma ,Cancer epigenetics ,Regulatory Elements, Transcriptional ,Regulation of gene expression ,Multidisciplinary ,TOR Serine-Threonine Kinases ,Fatty Acids ,Acetylation ,ErbB Receptors ,Gene Expression Regulation, Neoplastic ,Head and Neck Neoplasms ,030220 oncology & carcinogenesis ,Carcinoma, Squamous Cell ,Chromatin Immunoprecipitation Sequencing ,Sterol Regulatory Element Binding Protein 1 ,Signal Transduction ,Science ,Kruppel-Like Transcription Factors ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Article ,03 medical and health sciences ,ErbB ,Cell Line, Tumor ,Genetics ,Humans ,Epigenetics ,Transcription factor ,neoplasms ,PI3K/AKT/mTOR pathway ,Cell Proliferation ,Sphingolipids ,Tumor Suppressor Proteins ,General Chemistry ,Epigenome ,Lipid Metabolism ,stomatognathic diseases ,030104 developmental biology ,Cancer research ,Transcriptome ,Chromatography, Liquid ,Transcription Factors - Abstract
Squamous cell carcinomas (SCCs) comprise one of the most common histologic types of human cancer. Transcriptional dysregulation of SCC cells is orchestrated by tumor protein p63 (TP63), a master transcription factor (TF) and a well-researched SCC-specific oncogene. In the present study, both Gene Set Enrichment Analysis (GSEA) of SCC patient samples and in vitro loss-of-function assays establish fatty-acid metabolism as a key pathway downstream of TP63. Further studies identify sterol regulatory element binding transcription factor 1 (SREBF1) as a central mediator linking TP63 with fatty-acid metabolism, which regulates the biosynthesis of fatty-acids, sphingolipids (SL), and glycerophospholipids (GPL), as revealed by liquid chromatography tandem mass spectrometry (LC-MS/MS)-based lipidomics. Moreover, a feedback co-regulatory loop consisting of SREBF1/TP63/Kruppel like factor 5 (KLF5) is identified, which promotes overexpression of all three TFs in SCCs. Downstream of SREBF1, a non-canonical, SCC-specific function is elucidated: SREBF1 cooperates with TP63/KLF5 to regulate hundreds of cis-regulatory elements across the SCC epigenome, which converge on activating cancer-promoting pathways. Indeed, SREBF1 is essential for SCC viability and migration, and its overexpression is associated with poor survival in SCC patients. Taken together, these data shed light on mechanisms of transcriptional dysregulation in cancer, identify specific epigenetic regulators of lipid metabolism, and uncover SREBF1 as a potential therapeutic target and prognostic marker in SCC., The relevance and underlying molecular mechanisms of epigenetic regulation in squamous cell carcinomas (SCC) await further characterization. Here, the authors show a transcriptional regulatory loop involving SREBF1, TP63 and KLF5 driving tumourigenesis in SCC through fatty acid, ERBB and mTOR pathway regulation.
- Published
- 2021