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Metadynamics is employed to sample the configurations available to calcium carbonate nanoparticles in water, and to map an approximate free energy as a function of crystalline order. These data are used to investigate the validity of bulk and ideal surface energies in predicting structure at the nanoscale. Results indicate that such predictions can determine the structure and morphology of particles as small as 3-4 nm in diameter. Comparisons are made to earlier results on 2 nm particles under constant volume conditions which support nanoconfinement as a mechanism for enhancing the stability of amorphous calcium carbonate. Our results indicate that crystalline calcitelike structure is thermodynamically preferred for nanoparticles as small as 2 nm in the absence of nanoconfinement.

We show that recent developments in the application of metadynamics methods to direct simulations of crystallization make it possible to predict the orientation of crystals grown on self-assembled monolayers. In contrast to previous studies, the method allows for dynamic treatment of the organic component and the inclusion of explicit surface water without the need for computationally intensive interfacial energy calculations or prior knowledge of the interfacial structure. The method is applied to calcite crystallization on carboxylate terminated alkanethiols arrayed on Au (111). We demonstrate that a dynamic treatment of the monolayer is sufficient to reproduce the experimental results without the need to impose epitaxial constraints on the system. We also observe an odd-even effect in the variation of selectivity with organic chain length, reproducing experimentally observed orientations in both cases. Analysis of the ordering process in our simulations suggests a cycle of mutual control in which both the organic and mineral components induce complementary local order across the interface, leading to the formation of a critical crystalline region. The influence of pH, together with some factors that might affect the range of applicability of our method, is discussed.

Ordered organic substrates influence the crystallisation of minerals and different crystal morphologies and polymorphs can be stabilised by varying the properties of the substrates. The mechanisms behind this crystallisation control are not always apparent; however in recent years results from molecular modelling studies have led to an increased level of understanding. We present a review of the experimental evidence for crystallisation control by organic self-assembled monolayers and discuss the modelling methods that have been used to study these effects. We give an overview of the contribution modelling has made to the field of mineral crystallisation on organic substrates. The focus is on calcium carbonate because of its importance as a biomineral and, consequently, the large number of experimental and modelling studies that have been performed for this mineral. [ABSTRACT FROM AUTHOR]

Amorphous calcium carbonate is often the first phase to precipitate from solution during the mineralization of calcium carbonate, before the formation of one of the crystalline polymorphs. In vivo, this phase is believed to be essential for the manufacture of minerals displaying nonequilibrium morphologies. The precipitation of this, usually transient, phase and its subsequent transformation into one of the crystalline polymorphs can be controlled by organic molecules. Here, we present a series of molecular dynamics simulations that explore the amorphous calcium carbonate-water interface, the attachment of amino acids onto both hydrous and anhydrous amorphous calcium carbonate, and their effect on the surface. The results show that surface ions have a different coordination number distribution from bulk ions and can diffuse up to two orders of magnitude faster than their bulk counterparts, suggesting that crystallization is much more likely to occur in this region. All the amino acids investigated bind to the amorphous calcium carbonate surfaces. However, acidic amino acids have a clear preference for the surface of amorphous CaCO3•H2O. The favored mode of interaction of the amino acids is through amine and/or guanidine moieties. The important ramifications of the results for our understanding of protein-mineral interactions are discussed. [ABSTRACT FROM AUTHOR]