1. Meta-analysis of epigenome-wide association studies of carotid intima-media thickness
- Author
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Shih-Jen Hwang, Jordana T. Bell, Olli T. Raitakari, Mikko Hurme, Joanna M. Wardlaw, W. David Hill, Joshua C. Bis, Traci M. Bartz, Anton J.M. Roks, John M. Starr, Wolfgang Koenig, M. Arfan Ikram, Eliana Portilla-Fernandez, Alexander Teumer, Annette Peters, Mika Kähönen, Ian J. Deary, Maryam Kavousi, Nona Sotoodehnia, Joachim Thiery, Jennifer A. Brody, Melanie Waldenberger, Ulf Schminke, Abbas Dehghan, Hans J. Grabe, Roby Joehanes, Symen Ligthart, Daniel Levy, Bruce M. Psaty, A.H. Jan Danser, Wolfgang Rathmann, Henry Völzke, Andrew Wong, Mohsen Ghanbari, Jochen Seissler, Terho Lehtimäki, Ken K. Ong, Jane Maddock, Rory P. Wilson, Christopher J. O'Donnell, Cornelia Then, Christine Meisinger, Pashupati P. Mishra, Sahar Ghasemi, Marcus Dörr, Portilla-Fernández, Eliana [0000-0003-4105-8586], Ong, Kenneth [0000-0003-4689-7530], Apollo - University of Cambridge Repository, Tampere University, Department of Clinical Chemistry, Clinical Medicine, Department of Clinical Physiology and Nuclear Medicine, BioMediTech, Epidemiology, and Internal Medicine
- Subjects
0301 basic medicine ,Oncology ,medicine.medical_specialty ,Epidemiology ,Differentially methylated regions ,Aryl hydrocarbon receptor repressor ,Coronary Artery Disease ,030204 cardiovascular system & hematology ,Carotid Intima-Media Thickness ,Coronary artery disease ,03 medical and health sciences ,Epigenome ,0302 clinical medicine ,SDG 3 - Good Health and Well-being ,Risk Factors ,Internal medicine ,Mendelian randomization ,Medicine ,Vascular outcomes ,Humans ,ddc:610 ,cardiovascular diseases ,Stroke ,Cardiovascular risk factors ,Epigenome-wide association studies ,DNA methylation ,business.industry ,medicine.disease ,humanities ,3142 Public health care science, environmental and occupational health ,ddc ,030104 developmental biology ,Cross-Sectional Studies ,CpG site ,Intima-media thickness ,cardiovascular system ,Common carotid intima-media thickness ,business ,Meta-Analysis - Abstract
Funder: Nederlandse Organisatie voor Wetenschappelijk Onderzoek; doi: http://dx.doi.org/10.13039/501100003246, Funder: ZonMw; doi: http://dx.doi.org/10.13039/501100001826, Funder: Research Institute for Diseases in the Elderly, Funder: Ministerie van Onderwijs, Cultuur en Wetenschap; doi: http://dx.doi.org/10.13039/501100003245, Funder: Health Promotion Administration, Ministry of Health and Welfare; doi: http://dx.doi.org/10.13039/100013227, Funder: Municipality of Rotterdam, Common carotid intima-media thickness (cIMT) is an index of subclinical atherosclerosis that is associated with ischemic stroke and coronary artery disease (CAD). We undertook a cross-sectional epigenome-wide association study (EWAS) of measures of cIMT in 6400 individuals. Mendelian randomization analysis was applied to investigate the potential causal role of DNA methylation in the link between atherosclerotic cardiovascular risk factors and cIMT or clinical cardiovascular disease. The CpG site cg05575921 was associated with cIMT (beta = -0.0264, p value = 3.5 × 10-8) in the discovery panel and was replicated in replication panel (beta = -0.07, p value = 0.005). This CpG is located at chr5:81649347 in the intron 3 of the aryl hydrocarbon receptor repressor gene (AHRR). Our results indicate that DNA methylation at cg05575921 might be in the pathway between smoking, cIMT and stroke. Moreover, in a region-based analysis, 34 differentially methylated regions (DMRs) were identified of which a DMR upstream of ALOX12 showed the strongest association with cIMT (p value = 1.4 × 10-13). In conclusion, our study suggests that DNA methylation may play a role in the link between cardiovascular risk factors, cIMT and clinical cardiovascular disease.
- Published
- 2021