3,678 results on '"Bean A"'
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2. Integrating human dimensions within the LTAR Network to achieve agroecological system transformation
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Alycia R. Bean, Claire N. Friedrichsen, Gwendŵr Meredith, Zach Hurst, and Amanda L. Bentley Brymer
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Agroecosystem ,Ecology ,business.industry ,Geography, Planning and Development ,Environmental resource management ,Stakeholder ,Stakeholder engagement ,Management, Monitoring, Policy and Law ,Institutional support ,Research plan ,System transformation ,Business ,Productivity ,Agroecology - Abstract
On the Ground • Agroecosystem research often focuses on biophysical processes and productivity without incorporating human dimensions research and/or stakeholder engagement. • Connecting individual and community well-being to agro-innovation research is required for agro-ecological transformation to sustainable intensification. • Long-Term Agroecosystem Research (LTAR) Network sites have historically had varied degrees of human dimensions research within their research plan; however, LTAR's human dimensions capacity has grown. • To capitalize on this capacity, we propose a four-step framework for the LTAR Network to evolve a cohesive human dimensions strategy that brings together the social and ecological. • Continued institutional support is required to maintain and further pursue research that will support stakeholder co-developed science that facilitates agroecosystem transformations benefiting society.
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- 2022
3. Evidence-Based Medicine Training in United States-Based Physiatry Residency Programs
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Lumy Sawaki, Christina Case, Qing Mei Wang, Stacy J. Suskauer, Allison C. Bean, W. David Arnold, Elena Ilieva, Thiru M. Annaswamy, Sabrina Paganoni, Michael Fredericson, Maryam Hosseini, Julia Patrick Engkasan, Prakash Jayabalan, Carmen M. Cirstea, Pradeep Suri, Amy Schnappinger, Brad E. Dicianno, John Whyte, John-Ross Rizzo, David C. Morgenroth, Preeti Raghavan, and Mike Boninger
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medicine.medical_specialty ,Evidence-Based Medicine ,business.industry ,Rehabilitation ,MEDLINE ,Core competency ,Internship and Residency ,Physical Therapy, Sports Therapy and Rehabilitation ,Evidence-based medicine ,Physical and Rehabilitation Medicine ,Training (civil) ,United States ,Article ,Physical medicine and rehabilitation ,Surveys and Questionnaires ,Medicine ,Humans ,Curriculum ,business ,Journal club - Abstract
Although the physiatric community increasingly embraces evidence-based medicine (EBM), the current state of EBM training for trainees in physiatry is unclear. The purposes of this article are to report the results of the Association of Academic Physiatrists’ surveys of physiatry residency programs in the United States, to discuss the implications of their findings, and to better delineate the “baseline” upon which sound and clear recommendations for systematic EBM training can be made. The two Association of Academic Physiatrists surveys of US physiatry residency programs reveal that most survey respondents report that they include EBM training in their programs that covers the five recommended steps of EBM core competencies. However, although most respondents reported using traditional pedagogic methods of training such as journal club, very few reported that their EBM training used a structured and systematic approach. Future work is needed to support and facilitate physiatry residency programs interested in adopting structured EBM training curricula that include recommended EBM core competencies and the evaluation of their impact.
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- 2023
4. Projecting the Impact of Socioeconomic and Policy Factors on Greenhouse Gas Emissions and Carbon Sequestration in U.S. Forestry and Agriculture
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Jared Creason, Bruce A. McCarl, Alison Bean de Hernandez, Justin Baker, Shaun Ragnauth, Kemen Austin, Sara Ohrel, Christopher M. Wade, Gregory S. Latta, Yongxia Cai, and Jason P. H. Jones
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Ecology ,Agriculture ,business.industry ,Greenhouse gas ,Geography, Planning and Development ,Economics, Econometrics and Finance (miscellaneous) ,Environmental science ,Forestry ,Carbon sequestration ,business ,Socioeconomic status - Abstract
Projecting the Impact of Socioeconomic and Policy Factors on Greenhouse Gas Emissions and Carbon Sequestration in U.S. Forestry and Agriculture
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- 2022
5. Prevalence of deep and ovarian endometriosis in early pregnancy: ultrasound diagnostic study
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Ertan Saridogan, J. Naftalin, Alfred Cutner, E. Bean, Andrew W Horne, and Davor Jurkovic
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Adult ,medicine.medical_specialty ,Multivariate analysis ,Uterine fibroids ,Endometriosis ,Early pregnancy factor ,Logistic regression ,Ultrasonography, Prenatal ,Pregnancy ,Odds Ratio ,Prevalence ,Humans ,Medicine ,Radiology, Nuclear Medicine and imaging ,Ovarian Diseases ,Prospective Studies ,Radiological and Ultrasound Technology ,biology ,business.industry ,Obstetrics ,Uterus ,Ultrasound ,Obstetrics and Gynecology ,General Medicine ,medicine.disease ,Pregnancy Complications ,Reproductive Medicine ,Urogenital Abnormalities ,biology.protein ,Ovarian Endometriosis ,Female ,business ,Infertility, Female - Abstract
Objectives To assess the prevalence and morphological appearances of deep endometriosis and ovarian endometriomas using pelvic ultrasound examination in women attending for early pregnancy care. Methods This was a prospective observation study, set within a dedicated early pregnancy unit. We included 1341 consecutive women who attended for an early pregnancy assessment for reassurance or because of suspected early pregnancy complications. All women underwent transvaginal scans to assess the location and viability of their pregnancies. In addition, a detailed examination of pelvic organs was carried out to detect the presence of endometriosis and other gynaecological abnormalities. Data analysis was performed using logistic regression and multivariate analysis. Results The prevalence of deep endometriosis and ovarian endometriomas in women attending our early pregnancy unit was 4.9% (95% CI 3.8 - 6.2). In 33/66 (50%, 95% CI 37.9 - 62.1) women with endometriosis, this was a new diagnosis made for the first time during their early pregnancy scan. On multivariate analysis the presence of endometriosis was strongly associated with East Asian ethnicity (OR 1.51, 95% CI 0.50, 4.59), a history of subfertility (OR 3.15, 95% CI 1.63 - 6.07), congenital uterine anomalies (OR 5.69, 95% CI 2.17 - 14.9) and uterine fibroids (OR 2.37, 95% CI 1.31- 4.28). Morphological changes typical of decidualization were seen in 11/33 (33.3%, 95% CI 17.2 - 49.4)) endometriomas and 18/57 (31.6%, CI 19.5 - 43.7) deep endometriotic nodules. Conclusions Deep endometriosis and ovarian endometriomas were present in a significant proportion of women attending for early pregnancy assessment. The prevalence was affected by ethnicity and history of subfertility and it is likely to differ significantly among diverse populations depending on their characteristics. Ultrasound is a useful tool for the detection of endometriosis in early pregnancy and to identify women who may benefit from specialist antenatal care. This article is protected by copyright. All rights reserved.
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- 2022
6. Coherent diffraction of single Rice Dwarf virus particles using hard X-rays at the Linac Coherent Light Source
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Ahmad Hosseinizadeh, Chun Hong Yoon, Peter Schwander, Henry N. Chapman, Adrian P. Mancuso, M. Marvin Seibert, Hasan DeMirci, Akifumi Higashiura, Max F. Hantke, Benedikt J. Daurer, Richard Bean, Ti-Yen Lan, Atsushi Nakagawa, Richard A. Kirian, Daniel Westphal, Jakob Andreasson, N. Duane Loh, Kenta Okamoto, Max Rose, Petra Fromme, Daniel S. D. Larsson, Haiguang Liu, Veit Elser, Raymond G. Sierra, Kerstin Mühlig, Andrew Aquila, Yoonhee Kim, Daewoong Nam, Kartik Ayyer, Gijs van der Schot, Changyong Song, James Zook, Sébastien Boutet, Garth J. Williams, Ivan A. Vartanyants, Martin Svenda, Johan Bielecki, Garrett Nelson, Brenda G. Hogue, Peter Berntsen, Janos Hajdu, Max O. Wiedorn, Anna Munke, Salah Awel, Anton Barty, Jonas A. Sellberg, Hemanth K. N. Reddy, Carl Nettelblad, Nicusor Timneanu, Maximilian Bucher, Abbas Ourmazd, Filipe R. N. C. Maia, and Paulraj Lourdu Xavier
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0301 basic medicine ,Statistics and Probability ,Diffraction ,Data Descriptor ,02 engineering and technology ,Library and Information Sciences ,Linear particle accelerator ,Education ,law.invention ,Imaging ,03 medical and health sciences ,Optics ,Single-molecule biophysics ,law ,ddc:610 ,Uncategorized ,Physics ,biology ,Extramural ,business.industry ,Particle accelerator ,021001 nanoscience & nanotechnology ,biology.organism_classification ,Computer Science Applications ,030104 developmental biology ,Hard X-rays ,Rice dwarf virus ,Physics::Accelerator Physics ,Statistics, Probability and Uncertainty ,0210 nano-technology ,business ,Structural biology ,Biological physics ,Information Systems - Abstract
Scientific data 3, 160064 -(2016). doi:10.1038/sdata.2016.64, Single particle diffractive imaging data from Rice Dwarf Virus (RDV) were recorded using the Coherent X-ray Imaging (CXI) instrument at the Linac Coherent Light Source (LCLS). RDV was chosen as it is a well-characterized model system, useful for proof-of-principle experiments, system optimization and algorithm development. RDV, an icosahedral virus of about 70 nm in diameter, was aerosolized and injected into the approximately 0.1 μm diameter focused hard X-ray beam at the CXI instrument of LCLS. Diffraction patterns from RDV with signal to 5.9 Ångström were recorded. The diffraction data are available through the Coherent X-ray Imaging Data Bank (CXIDB) as a resource for algorithm development, the contents of which are described here., Published by Nature Publ. Group, London
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- 2023
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7. Impact of the COVID-19 pandemic on South Australia’s emergency departments: evidence from two lockdowns
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Nigel Bean, Mark Mackay, Matthew Roughan, Laura M. Boyle, Boyle, Laura M, Mackay, Mark, Bean, Nigel, and Roughan, Matthew
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Context (language use) ,emergency department presentations ,03 medical and health sciences ,0302 clinical medicine ,SDG 3 - Good Health and Well-being ,Health care ,Pandemic ,Medicine ,030212 general & internal medicine ,business.industry ,030503 health policy & services ,Health Policy ,Australia ,Health services research ,COVID-19 ,Emergency department ,Triage ,Metropolitan area ,Mental health ,health services research ,medical care ,emergency treatment ,hospitals ,0305 other medical science ,business ,health systems ,Demography - Abstract
Objective This study assessed the impact of the COVID-19 pandemic on emergency departments (EDs) in South Australia, measured by changes in the number and casemix of patients in the system over time. Methods Data from the South Australia Emergency Department Dashboard, updated every 30 min, were analysed for the period 4 October–21 December 2020. The Dashboard reports live counts of the number and type of patients in each of the six adult metropolitan public EDs in Adelaide, South Australia. Results There was a significant difference in the mean daily average occupied ED capacity before and during two distinct increases in COVID-19 cases in South Australia. An increase in COVID-19 cases coincided with a decrease in patients in EDs (Pearson’s r = –0.93 and –0.67; P
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- 2021
8. Merkel cell carcinoma of the head and neck in the south-east of England
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Paul Norris, J. Rooney, V. Lachanas, C. Surwald, Rachel Loke, T. Bean, J. Dhanda, C.M. Bowe, A.B. Moody, Brian Bisase, A.W. Barrett, Stergios Doumas, and N. Gallagher
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medicine.medical_specialty ,Skin Neoplasms ,Sentinel lymph node ,Malignancy ,030207 dermatology & venereal diseases ,03 medical and health sciences ,0302 clinical medicine ,Positron Emission Tomography Computed Tomography ,Internal medicine ,Biopsy ,Overall survival ,Humans ,Medicine ,Stage (cooking) ,Head and neck ,Neoplasm Staging ,Retrospective Studies ,medicine.diagnostic_test ,Sentinel Lymph Node Biopsy ,business.industry ,Merkel cell carcinoma ,Incidence (epidemiology) ,medicine.disease ,Carcinoma, Merkel Cell ,Otorhinolaryngology ,030220 oncology & carcinogenesis ,Surgery ,Oral Surgery ,business - Abstract
Merkel cell carcinoma (MCC) is a rare and highly aggressive neuroendocrine malignancy of the skin. Its incidence is increasing with half of cases involving the head and neck. To the best of our knowledge, few large studies have been published in the UK, and to date this is the largest reported series of head and neck MCC. We retrospectively reviewed the outcomes of patients with MCC in three hospitals in the south-east of England over a 12-year period (2008–2019). Diagnosis was based on histological data following biopsy. Overall survival and disease-specific survival were calculated using Kaplan–Meier and log-rank tests. Fifty-eight patients met the inclusion criteria (24 stage I, 22 stage II, 9 stage III, and 3 unclassified). Median disease-free survival was 36 months (95% CI 0 to 77.2) and median overall survival 50 months (95% CI 29.9 to 70). Overall five-year survival was 34.4% (95% CI 17% to 52%) with two-year survival at 62% (95% CI 48% to 76%). Five-year disease-free survival was 26.7% (95% CI 17 to 52%) with two-year disease-free survival at 54% (95% CI 40% to 68%). To date, this is the largest UK based study reporting overall and disease-free survival associated with MCC of the head and neck. Half the patients presented late, and surgery was the mainstay of treatment, augmented by adjuvant radiotherapy. There is a need to better stratify patients at risk of developing metastatic disease, with the use of sentinel lymph node biopsy and positron-emission tomography-computed tomography (PET-CT), as immunotherapy and targeted agents are now available to treat advanced disease.
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- 2021
9. Mandated restrictions on the use of medically important antibiotics in broiler chicken production in Canada: implications, emerging challenges, and opportunities for bolstering gastrointestinal function and health — a review
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Lisa Bean-Hodgins and Elijah G. Kiarie
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0301 basic medicine ,animal structures ,030109 nutrition & dietetics ,business.industry ,medicine.drug_class ,Antibiotics ,0402 animal and dairy science ,Broiler ,04 agricultural and veterinary sciences ,Mand ,040201 dairy & animal science ,Biotechnology ,03 medical and health sciences ,Food Animals ,Medicine ,Production (economics) ,Animal Science and Zoology ,business ,Gastrointestinal function - Abstract
Chicken Farmers of Canada has been progressively phasing out prophylactic use of antibiotics in broiler chicken production. Consequently, hatcheries, veterinarians, and nutritionists have been mandated to contend with less reliance on the use of preventive antibiotics. A topical concern is the increased risk of proliferation of enteric pathogens leading to poor performance, increased mortality, and compromised welfare. Moreover, the gut harbors several taxa such as Campylobacter and Salmonella capable of causing significant illnesses in humans via contaminated poultry products. This has created an opportunity for research and development of dietary strategies designed to modulate gastrointestinal environment for enhanced performance and food safety. Albeit with inconsistent responses, literature data suggest that dietary strategies such as feed enzymes, probiotics/prebiotics, and phytogenic feed additives can bolster gut health and function in broiler chickens. However, much of the efficacy data were generated at controlled research settings that vary significantly with the complex commercial broiler production operations due to variation in dietary, health, and environmental conditions. This review will summarize implications of mandated restrictions on the preventative use of antibiotics and emerging Canadian broiler production programs to meet processor specifications. Challenges and opportunities for integrating alternative dietary strategies in commercial broiler production settings will be highlighted.
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- 2021
10. Mobile Alert and Warning in the United States and Japan: Confronting the Challenges of International Harmonization
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Bean, Hamilton, Cruz, Ana Maria, Shimizu, Mika, Stephens, Keri K., McGlone, Matthew, and Strover, Sharon
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Sustainable development ,Global and Planetary Change ,Alerts ,Warning ,Disaster risk reduction ,Warning system ,business.industry ,Geography, Planning and Development ,Conference Report ,Management, Monitoring, Policy and Law ,Public relations ,United States ,Disasters ,Japan ,Natural hazard ,Political science ,Mobile technology ,Global partnership ,International harmonization ,business ,Safety Research ,Mobile device - Abstract
A U.S.-Japan expert workshop on mobile alert and warning was held online 8–10 September 2021. Funded by the Japan Foundation’s Center for Global Partnership (CGP) and responding to the Sendai Framework for Disaster Risk Reduction 2015–2030, the workshop compared U.S. and Japanese mobile alert and warning contexts, systems, policies, and messages to investigate possibilities for international harmonization of mobile device-based early warning. The workshop’s sessions revealed two interrelated issues that repeatedly surfaced among workshop participants: culture and policy. The workshop illuminated several possibilities and problems confronting U.S., Japanese, and global stakeholders as they develop, deploy, and seek to improve the effectiveness of mobile alert and warning systems and messages.
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- 2021
11. Molecular Testing in Breast Cancer
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Gregory R. Bean, Ariel Wu, Lulu Sun, Ian S. Hagemann, and Chieh-Yu Lin
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Oncology ,medicine.medical_specialty ,medicine.diagnostic_test ,business.industry ,Immune checkpoint inhibitors ,Microsatellite instability ,Ductal carcinoma ,medicine.disease ,Patient care ,Pathology and Forensic Medicine ,Breast cancer ,MammaPrint ,Internal medicine ,medicine ,MISMATCH REPAIR DEFICIENCY ,Molecular Medicine ,Oncotype DX ,business - Abstract
Molecular testing in breast cancer is a rapidly developing field that is becoming increasingly integral to patient care. This article provides an overview of currently available molecular assays and testing modalities that have prognostic, predictive, and therapeutic value. These include multigene assays for invasive breast cancer (Oncotype DX, MammaPrint, Prosigna, and Breast Cancer Index) and ductal carcinoma in situ (Oncotype DX DCIS and DCISionRT) and companion tests to detect PIK3CA mutations and NTRK fusions. The various assays related to immune checkpoint inhibitors, consisting of immunohistochemistry with anti–programmed death-ligand 1 antibodies SP142 and 22C3 and detection of microsatellite instability, mismatch repair deficiency, and tumor mutational burden are also discussed. Finally, the practical utility and hopeful promise of next-generation sequencing panels and circulating tumor (cell-free) DNA assays are evaluated. This review should serve as a useful and practical reference for practicing pathologists, molecular pathologists, clinicians, and researchers.
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- 2021
12. Factors Associated With Burnout in Physical Medicine and Rehabilitation Residents in the United States
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Julie K. Silver, Kevin Franzese, Allison C. Bean, Allison N. Schroeder, Matthew Mesoros, Sara Cuccurullo, Gina McKernan, and Monica Verduzco-Gutierrez
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medicine.medical_specialty ,business.industry ,Family medicine ,Rehabilitation ,Medicine ,Physical Therapy, Sports Therapy and Rehabilitation ,Burnout ,business - Published
- 2021
13. Trade-offs between reducing complex terminology and producing accurate interpretations from environmental DNA: Comment on 'Environmental DNA: What’s behind the term?' by Pawlowski et al. (2020)
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Luca Mirimin, Fabian Roger, Olivier Morissette, Quentin Mauvisseau, Kathryn A. Stewart, Michael T. Monaghan, Kristy Deiner, Pritam Banerjee, Sarah J. Helyar, Shivakumara Manu, Luke Holman, Colin W. Bean, Hugo J. de Boer, Marie Eve Monchamp, Owen S. Wangensteen, Matthieu Leray, Hideyuki Doi, Anaïs Lacoursière-Roussel, S. Elizabeth Alter, Caterina M. Antognazza, Matthew A. Barnes, Naiara Rodríguez-Ezpeleta, Reindert Nijland, Cathryn L. Abbott, Kingsly C. Beng, Pascal I. Hablützel, and Evolutionary and Population Biology (IBED, FNWI)
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0106 biological sciences ,0301 basic medicine ,ADN ,Biology ,010603 evolutionary biology ,01 natural sciences ,Terminology ,clear terminology ,03 medical and health sciences ,organismal DNA ,0302 clinical medicine ,Marine Animal Ecology ,Genetics ,ecology of eDNA ,DNA Barcoding, Taxonomic ,Environmental DNA ,Biological sciences ,Ecology, Evolution, Behavior and Systematics ,extra-organismal DNA ,030304 developmental biology ,0303 health sciences ,business.industry ,Environmental resource management ,Trade offs ,Sampling (statistics) ,Mariene Dierecologie ,Biodiversity ,500 Naturwissenschaften und Mathematik::570 Biowissenschaften ,Biologie::570 Biowissenschaften ,Biologie ,DNA ,DNA, Environmental ,Term (time) ,Epistemology ,Biological monitoring ,Geography ,030104 developmental biology ,030220 oncology & carcinogenesis ,Seguiment biològic ,WIAS ,business - Abstract
In a recent paper, "Environmental DNA: What's behind the term? Clarifying the terminology and recommendations for its future use in biomonitoring," Pawlowski et al. argue that the term eDNA should be used to refer to the pool of DNA isolated from environmental samples, as opposed to only extra-organismal DNA from macro-organisms. We agree with this view. However, we are concerned that their proposed two-level terminology specifying sampling environment and targeted taxa is overly simplistic and might hinder rather than improve clear communication about environmental DNA and its use in biomonitoring. This terminology is based on categories that are often difficult to assign and uninformative, and it overlooks a fundamental distinction within eDNA: the type of DNA (organismal or extra-organismal) from which ecological interpretations are derived., Molecular Ecology, 30 (19), ISSN:0962-1083, ISSN:1365-294X
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- 2021
14. Professional conduct oversight in neurosurgery
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Alex B. Valadka, James R. Bean, and Frederic T. Knape
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Professional conduct ,Medical education ,medicine.medical_specialty ,business.industry ,Medicine ,General Medicine ,Neurosurgery ,business - Published
- 2021
15. Primary hepatic neoplasms arising in cirrhotic livers can have a variable spectrum of neuroendocrine differentiation
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Cynthia D. Guy, Chanjuan Shi, Rachel Jug, William R. Jeck, and Sarah M. Bean
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Liver Cirrhosis ,Male ,Pathology ,medicine.medical_specialty ,Carcinoma, Hepatocellular ,Cirrhosis ,Cell ,Neuroendocrine differentiation ,Pathology and Forensic Medicine ,Hepatic neoplasms ,Carcinoma ,medicine ,Humans ,Aged ,business.industry ,Liver Neoplasms ,Middle Aged ,medicine.disease ,Laboratory results ,digestive system diseases ,Carcinoma, Neuroendocrine ,Mixed Tumor, Malignant ,medicine.anatomical_structure ,Hepatocellular carcinoma ,Immunohistochemistry ,Female ,business - Abstract
Summary Primary hepatic neoplasms with neuroendocrine differentiation are extremely rare. Their clinicopathological features and molecular genetic basis are largely unknown. We identified four cases of primary hepatic neoplasms with neuroendocrine differentiation. Electronic medical records were reviewed for clinical history, imaging findings, laboratory results, and follow-up. Pathology slides, immunohistochemistry, and ancillary studies were reviewed. There were two females and two males with age ranging from 52 to 74 years. There was one amphicrine carcinoma with tumor cells simultaneously demonstrating both hepatocellular and neuroendocrine differentiation, one mixed hepatocellular-neuroendocrine carcinoma (NEC) with hepatocellular component intermingled with neuroendocrine component, one small cell NEC, and one well-differentiated neuroendocrine tumor. Next- generation sequencing of the mixed hepatocellular-NEC and small cell NEC showed molecular/genetic alterations commonly seen in hepatocellular carcinoma (HCC). All four cases arose in a background of cirrhosis. Primary hepatic neoplasms arising in cirrhotic livers can have a spectrum of neuroendocrine differentiation. Presence of a NEC component may be an indicator of aggressiveness. In addition, primary hepatic carcinomas with neuroendocrine differentiation likely share the same molecular pathways as HCC.
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- 2021
16. Nodular fasciitis of the breast: clinicopathologic and molecular characterization with identification of novel USP6 fusion partners
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Gregory R. Bean, Ryanne A. Brown, Jeffrey M. Cloutier, Elizabeth M. Hosfield, Joaquin J. Garcia, Gregory W. Charville, Megan L. Troxell, Kimberly H. Allison, and Christian A. Kunder
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0301 basic medicine ,Pathology ,medicine.medical_specialty ,medicine.diagnostic_test ,business.industry ,Metaplastic carcinoma ,Nodular fasciitis ,medicine.disease ,Malignancy ,Pathology and Forensic Medicine ,Metastasis ,03 medical and health sciences ,Axilla ,030104 developmental biology ,0302 clinical medicine ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Biopsy ,medicine ,Differential diagnosis ,business ,Fluorescence in situ hybridization - Abstract
Nodular fasciitis is a benign, self-limited, pseudosarcomatous neoplasm that can mimic malignancy due to its rapid growth, cellularity, and mitotic activity. Involvement of the breast is rare and diagnosis on biopsy can be challenging. In this largest series to date, we examined the clinicopathologic and molecular characteristics of 12 cases of nodular fasciitis involving the breast/axilla. All patients were female, with a median age of 32 years (range 15-61). The lesions were 0.4 to 5.8 cm in size (median 0.8). All cases presented as palpable masses, and two patients had overlying skin retraction. Microscopically, lesions were relatively well-circumscribed nodular masses of bland myofibroblastic spindle cells within a variably myxoid stroma. Infiltrative growth into adipose tissue or breast epithelium was frequent. Mitotic figures were present in all cases, ranging from 1 to 12 per 10 high-power fields (median 3). Immunohistochemically, all cases expressed smooth muscle actin and were negative for pan-cytokeratin, p63, desmin, CD34, and nuclear beta-catenin. Targeted RNA sequencing performed on 11 cases identified USP6 gene fusions in eight; one additional case was positive by break-apart fluorescence in situ hybridization. The common MYH9-USP6 rearrangement was detected in four cases; another case had a rare alternative fusion with CTNNB1. Three cases harbored novel USP6 gene fusions involving NACA, SLFN11, or LDHA. All fusions juxtaposed the promoter region of the 5' partner gene with the full-length coding sequence of USP6. Outcome data were available for eight patients; none developed recurrence or metastasis. Five patients elected for observation without immediate excision, and self-resolution of the lesions was reported in three cases. Albeit uncommon, nodular fasciitis should be considered in the differential diagnosis of breast spindle cell lesions. A broad immunohistochemical panel to exclude histologic mimics, including metaplastic carcinoma, is important. Confirmatory detection of USP6 rearrangements can aid in classification, with potential therapeutic implications.
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- 2021
17. Utilization of Chest Pain Decision Aids in a Community Hospital Emergency Department: A Mixed-methods Implementation Study
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Jason R Stone, Angela Silva, Uma Krishnan, Madiha Khan, and Glenn Bean
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Chest Pain ,Decision support system ,business.industry ,Medical record ,Decision Making ,Hospitals, Community ,Emergency department ,Chest pain ,medicine.disease ,Community hospital ,Decision Support Techniques ,Physicians ,medicine ,Decision aids ,Humans ,Generalizability theory ,Implementation research ,Medical emergency ,medicine.symptom ,Emergency Service, Hospital ,Cardiology and Cardiovascular Medicine ,business - Abstract
INTRODUCTION Chest pain is a common reason for emergency department (ED) visits. Evidence-based decision aids assessing risk for an adverse cardiac event are underused in community hospital emergency care. This study explored the acceptability, barriers, facilitators, and potential strategies for implementation of the HEART Score risk stratification tool, accelerated diagnostic pathway, and shared decision-making visual aid with physicians and chest pain patients ages >45 in a community hospital ED. METHODS Single center, mixed-methods study. (1) Physician semistructured interviews using The Consolidated Framework for Implementation Research for systematic analysis. (2) Patient and physician surveys. (3) 16-week intervention of physician training and pilot testing of decision aids with ED patients. RESULTS Physician interviews (n = 19); key facilitators: electronic medical record decision support, ease of use, risk stratification and disposition support, and shared decision-making training. Key barriers: time constraints, patient ability, and/or willingness to participate in shared decision-making, lack of integration with medical record and change in practice workflow. Patient study participants (n = 184) with a survey response rate of 92% (n = 170). Most patients (85%) were satisfied with the shared decision-making visual aid. Physicians surveyed (n = 84) with a response rate of 50% (n = 42). Most physicians, 95% (n = 40), support use of the HEART Score, with limited acceptance of the shared decision-making visual aid of 57% (n = 24). CONCLUSIONS Using evidence-based chest pain decision aids in a community hospital ED is feasible and acceptable. Key barriers and facilitators for implementation were identified. Further research in community hospitals is needed to verify findings, examine generalizability, and test implementation strategies.
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- 2021
18. Prevalence, associated factors and outcomes of pressure injuries in adult intensive care unit patients: the DecubICUs study
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Labeau, Sonia O, Afonso, Elsa, Benbenishty, Julie, Blackwood, Bronagh, Boulanger, Carole, Brett, Stephen J, Calvino-Gunther, Silvia, Chaboyer, Wendy, Coyer, Fiona, Deschepper, Mieke, François, Guy, Honore, Patrick M, Jankovic, Radmilo, Khanna, Ashish K, Llaurado-Serra, Mireia, Lin, Frances, Rose, Louise, Rubulotta, Francesca, Saager, Leif, Williams, Ged, Blot, Stijn I, Dritan, Muzha, Antoni Margarit Ribas, Fernando, Lipovesty, Cecilia, Loudet, Fiona, Coyer, Philipp, Eller, Nafseen, Mostafa, Patrick, M Honoré, Vanesa Mercado Telleria, Jasmina, Smajic, Paula Cristina Nogueira, Khalid Mahmood Khan Nafees, Romuald, Hentchoya, Louise, Rose, Javiera, Soledad, Frances, Lin, Yenny, Cardenas, Amylkar Garay Reyes, Alan, Sustic, Meropi, Mpouzika, Tamas, Vymazal, Hanne Irene Jensen, Hernan, Aguirre-Bermeo, Liivi, Maddison, Maija, Valta, Silvia, Calvino-Gunther, Frank, Bloos, Faustina Excel Adipa, Vasilios, Koulouras, Judy, Enamorado, Zsuzsann, Ágoston, Hrönn, Birgisdóttir, Amit, Gupta, Mohan, Gurjar, Bram, Kilapong, Seyed Mohammadreza Hashemian, Ignacio, Martin-Loeches, Julie, Benbenishty, Andrea, Cortegiani, Kelly, Fletcher, Yoshiro, Hayashi, Wangari, Waweru-Siika, Khalid, Abidi, Sang-Min, Lee, Burhan, Hadri, Mihails, Dolgusevs, Fayez François Abillama, Tomas, Jovaisa, Cyril, Thix, Muhammed, Elhadi, Basri Mat Nor, Shanti, Ratnam, Mohd Zulfakar Mazlan, Sundaresan, Maiyalagan, Luis, Sánchez-Hurtado, Adrian, Belii, Mendsaikhan, Naranpurev, Prabha, Gautam, Dylan De Lange, Rachael, Parke, Rose Ekama Ilesanmi, Mirjana, Shosholcheva, Antonija, Petosic, Ranveig, Lind, Madiha Hashmi Ffarcsi, Javier, Bogarin, Aaron Mark Hernandez, Malgorzata, Mikaszewska-Sokolewicz, Bruno, Sousa, Dana, Tomescu, Dorel, Sandesc, Theogene, Twagirumugabe, Vitaly, Gusarov, Maie, Ebaid, Radmilo, Jankovic, Gari, Slobodianiuk, Andrea, Martonova, Rihard, Knafelj, Mervyn, Mer, Emilio, Maseda, Bernardo, Panka, Joerg, C Schefold, Eva, Joelsson-Alm, Konlawij, Trongtrakul, Lorna, Merritt-Charles, Lamia Ouanes 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Matty, Koopmans, Rik, T Gerritsen, Arlette Van Den Elst, Mirjam, Evers, Oscar, Oiting, Rob, Wilting, Bart, Ramaker, Mark van der Kuil, Jan-Willem, Fijen, Lenneke, Haas, Jasper, Haringman, Lynette, Newby, Eileen, Gilder, Danielle, Hacking, Rica, Dagooc, Rima, Song, Hansjoerg, Waibel, Frances, Dawn, Jackie, Rapley, Llesley, Chadwick, Carmel, Chapman, Petra, Crone, Jonathan, Albrett, Peter, Marko, Jennifer, Goodson, Troy, Browne, Richard, Whitticase, Cheryl, Davidson, Harriet, Judd, Daniel, Owens, Tonia, Onyeka, Innocent, Ugwu, Rose, Ilesanmi, Prisca Olabisi Adejumo, Afolabi, Owojuyigbe, Anthony, Adenekan, Stella, Uba, Christiana, Chime, Deborah, Jibrin, Babangida John Sankey, Oyebola, Adekola, Simeon, Olanipekun, Mirjana, Shosolcheva, Vanja, Gievski, Andrijan, Kartalov, Filip, Naumovski, Biljana, Kuzmanovska, Angela, Trposak, Zaneta, Bogoevska-Miteva, Rodney, Rosalia, Brita Fosser Olsen, Britt, Sjobo, Karianne Dale Jensen, Drammen, Sykehus, Birgitte Fosser Johansen, Esben, Straede, Edda, Johansen, Inger Johanne Finnstrom, Annette, Toellefsen, Hege, Ostenjo, Hege, Bjorgen, Bjorn, Bratsberg, Elin, Kristoffersen, Elin Mari Skorstad, Siri, Hansen, Sylvi, Vullum, Gro Anne Lunde, Wenche, Arntsen, Mette, Lund, Gro Ringstad Akselsen, Kristina Reinertsen Monstad, Ane, Stenset, Hanne, Haugom, Bjoern, Monsen, Lisa, Høgvall, Siw, Trudvang, Britt, Galaaen, Siv Karin Malmin, Marit Hildegunn Andersen, Rita Foss Hargott, Yvonne, Andersen, Elin, Steffenak, Marit, Nyhus, Barbro, Meland, Madiha, Hashmi, Noelia, Rivas, Elizabeth, Maidana, Alberto de Jesús Ortiz, Dolly Mabel Bordon Cabral, Marcelo, Simi, Cesar, Aponte, Juan Carlos Rivas, Sirley, Gill, Amilcar, Garcia, Gloria, Alvarenga, Laura, Cespedes, Hugo, Perez, Maria Liz Moreira, Fidelina, Canete, Roberto, Gonzalez, Natalia, Monges, Mary, Coman, Marcelo, Pederzani, Natalia, Franco, Ferdinand, Aganon, Regina, Martinez, Debbie, Noblezada-Uy, Chris Gerome Ellazar, Franklin Dean Cerezo, Jose Emmanuel Palo, Cristal April Jane Aperocho, Michael, Isanan, Marta, Tubacka, Przemyslaw, Jasiewicz, Miroslaw, Czuczwar, Michal, Borys, Aleksandra, Gutysz-Wojnicka, Lidia, Glinka, Ryszard, Gawda, Jan, Bilawicz, Paula, Cabrita, João, Vieira, Margarida Ferreira Figueiredo, Cristiana Mota Pinheiro, Nelson, Antunes, Laura, Pedro, Fatima, Ferreira, Isabel, Parente, Maria, Varela, Fatima, Fernandes, Claudia, Martins, Abel, Viveiros, Raquel, Cavaco, Clara Santa Rita, Sofia, Dias, Ana Margarida Feranandes, Pedro, Silva, Catarina, Nunes, João, Cabral, Filpe, Pires, Hilaryano, Ferreira, Jacinta, Santos, Vitor Manuel Vaz Pinto, Bruno Miguel Bispo, Amelia, Ferreira, Elena, Molinos, Estevão, Lafuente, Ricardo, Gregorio, Humberto, Costa, Ângela, Lima, Susana, Ferreira, Vanda, Seromenho, Eulália, Luis, Idália, Valerio, Helena, Cesar, Ana, Tavares, Ahmed Subhy Alsheikhly, Saeed, Mahmood, Catalin Traian Guran, Alida, Moise, Daniela Carmen Filipescu, Mihail, Luchian, Mihai, Popescu, Monica Adriana Scutariu, Cristina, Petrisor, Natalia, Hagau, Ioana, Grigoras, Tatiana, Patrichi, Vitaly, Gusarev, Alexandra, Pivkina, Vladimir, Kulakov, Olga, Ignatenko, Julia, Kovaleva, Trina, Zhivotneva, Marina, Zhedaeva, Nikita, Matiushkov, Olga, Ershova, Natalya, Egorova, Victoria, Khoronenko, Danil, Baskakov, Dmitry, Sergeev, Michael, Piradov, Liudmila, Grishina, Marat, Magomedov, Evgeniy, Zuev, Uri, Gorokhovatsky, Anna, Leonova, Liudmila, Fadeeva, Vladislav, Belskiy, Dmitriy, Galishevskiy, Nadezhda, Zubareva, Maksim, Tribulev, Oksana, Zueva, Alexander, Kiselev, Nikolaj, Kamenshchikov, Ekaterina, Tokareva, Maxim, Petrushin, Irina, Starchenko, Isaac, Nshimyumuremyi, Jerome, Muhizi, Egide, Buregeya, Josue, Nzarora, Amer, Assiri, Maie Salem Ebaid, Ghaleb, Almekhlafi, Yasser, Mandourah, Jelena, Velickovic, Dejan, Veličković, Bojan, Jovanovic, Adi, Hadzibegovic, Branislava, Stefanovic, Vanja, Misic, Vesna, Bumbasirevic, Marija, Rajković, Milena, Stojanovic, Srđan, Gavrilovic, Maja, Stanojević, Aktham, Yaghi, Anton, Turčan, Peter, Firment, Garri, Slobodianiuk, Daria, Rabarova, Danca, Lančaričová, Janko, Vlaovic, Matjaž, Groznik, Milica, Lukic, Janja, Perme, Maja, Sostaric, Nejc, Umek, Tomislav, Mirkovic, Simon, Dolenc, Misa, Fister, Nika, Zorko, Andrej, Markota, Nomhle Princess Yeni, Phumele, Jali, Shelley, Schmollgruber, Muhommed Ridwaan Syed, Nivisha, Parag, Robert, Wise, Maria, Galiana, José Alejandro Navarro, Ana María De Pablo, Patricia, Albert, Pilar, Martinez, Yolanda, Mendiara, Barbara, Garcia, Ana Alabart Llinas, Marilyn, Riveiro, Elisabet, Gallart, Alba, Riera, Miquel, Sanz, Swagotika, Salo, Miguel Angel Gimenez Lajara, Montserrat Venturas Nieto, Rosa, Garcia, José Manuel Garcia Pena, Maria Carmen Gorgolas, Maria Aranzazu Isasi, Rafael, Sierra, Federico, Gordo, Isabel, Conejo, Vicent, Salvà-Costa, Carolina, Garzón-Tovar, Sara, Lospitao, Rafael, Gonzalez, Pedro, Gutierrez, Mercè, Girona, Jordi, Adamuz, Pablo Garcia Olivares, José Peral Gutierrez de Ceballos, Celia, Tirado, Irene De Wit, Ana Belén Curto Polo, Maria Del Mar Diaz Salcedo, Javier, Ripolles-Melchor, Eugenio, Martinez-Hurtado, Jorge Duerto Alvarez, María Luisa Bravo Arcas, Juan Ignacio Torres Gonzalez, Ana Belén Sánchez de la Ventana, Pablo Lopez-Arcas Calleja, Raquel Garcia Alvarez, Purificacion Sanchez Zamora, Alvaro Ortega Guerrero, Rosario, Cosano, Jonathan, Perez-Vacas, Margarita, Campos-Perez, Emma Moreno Barreiro, Losune Cano Sanchez, Monica Garcia Diaz, Raquel, Jimenez, Lorena Del Rio Cabajo, Daniel Sancho Muriel, Helena Fernandez Alonso, Ana Wensell Fernández, Isabel Santín Piñan, Guillermo Muñiz Albaiceta, Maria Cristina Iglesias Fernandez, Francisco Javier Saenz Abos, Pablo, Monedero, Ramon Molina Chueca, Lydia Gallego Aguirre, Silvia Call Manosa, Carmen Partera Luque, Neus, Calpe, Monica Recio Losilla, Meritxell Tapia Fores, Olga, Farre, Oscar, Fernandez, M Del Rosario Villar Redondo, Donaldo, S Arteta Arteta, Maria Angeles Hurtado Sanchez, Cristina Paños Espinosa, Laura Martinez Reyes, Laura Claramunt Domenech, Carmen Velasco Guillén, Josep Trenado Alvarez, Mercedes Del Cotillo, Jesus Emilio Barrueco-Francioni, Belen Burgos Conde, Maria Pilar Sogues Blanco, Maria Luisa Blasco, Ana Isabel Clement, Clara, Hurtado, Luz Coronado Sanz, David, Perez-Torres, Estefanía, Prol-Silva, Jorge, Pereira, Iván Areán González, Anastasio Espejo Cano, Cesar Rodriguez Nuñez, Inmaculada Lorenzo Fernadez, Alejandra Azahara Marguello Fernandez, Rosa Del Bosque Diez, Badiola, Hilario, Begoña, Zalba-Etayo, Ana, Pascual-Bielsa, Preveen, Banwarie, Dick, Nahar, Alisha van Axel, Naraindath, N Boedjawan, Erika Backlund Jansson, Ann-Sofie, Malvemyr, Lotta, Johansson, Ulla, Sandberg, Catarina, Tingsvik, Gunilla, Mattsson, Gun, Löf, Martin, Spångfors, Mona, Ringdal, Sebastian, Geijer, Lotti, Orvelius, Mia, Hylen, Caroline, Lagerhäll, Eva, Åkerman, Viveca Hamback Hellkvist, Ulrica, Mickelsson, Ewa, Wahlbom, Ing-Marie, Larsson, Ewa, Wallin, Filippo, Boroli, Solenne, Ory, Margaret Lynn Jong, Alexander, Dullenkopf, Martin, Lang, Yvan, Fleury, Marianne, Maus, Nawfel, Ben-Hamouda, Anne, Fishman, Mei Yu Hsu, Shu Chuan Chang, Konlawij, Trongtratul, Chaiwut, Sawawiboon, Sunthiti, Morakul, Bodin, Khwannimit, Keevan, Singh, Dale, Ventour, Dianne, Figaro-Barclay, Sasha, Sankar-Maharaj, Mhamed Sami Mebazaa, Salma, Kamoun, Souheil, Elatrous, Lamia, Besbes, Fekri, Abroug, Walid, Naija, Youssef Zied Elhechmi, Walid, Sellami, Zied, Hajjej, Takoua, Merhabene, Imen, Talik, Ozlem Ozkan Kuscu, Ozcengiz, Dilek, Avşar, Zerman, Hayriye Cankar Dal, Sema, Turan, Semih, Aydemir, Hakan, Yilmaz, Duygu Kayar Calili, Seval, İzdes, Melike, Cengiz, Ayça, Gümüş, Banu, Taşdemir, Ali, Kağnıcı, Mustafa, Ay, Serap Avcı Ay, Gulbahar, Caliskan, Turkay, Akbas, Abidin Oner Balbay, Serdar, Efe, Volkan, Inal, Gülseren, Elay, Pınar, Karabacak, Boğaç, Özserezli, Evren, Şentürk, Oktay, Demirkiran, Suha, Bozbay, Elif, Erdogan, Mustafa, Akker, Nebia, Peker, Asu, Ozgultekin, Sibel Ocak Serin, Can, Turan, Gulsah, Karaoren, Senay, Goksu, Sait, Karakurt, Huseyin, Arikan, Fethi, Gül, İsmail, Cinel, Iskender, Kara, Hasan Nabi Undar, Yesim Serife Bayraktar, Jale Bengi Çelik, Murat Emre Tokur, Demet Tok Aydin, İsmail, Yildiz, Beysim, Özcan, Başar, Erdivanli, Ahmet, Eroglu, Devrim, Akdağ, Nurdan, Ünlü, Adonis, Dungca, Ashwaq, Ali, Bindu, Thankamma, Paul Eric Reyes, Sini, John, Ajitha, Rajendran, Fatima Kasem El Ahmad, Kathleen Ann Smiley, Susanna, Hojden, Mia Thorning Miller, Vishnu Das Sasidharan Nair, Maria Gracia San Antonio, Khaled Al Qawasmeh, Sabah Abu Shawish, Hilary, Twiggs, Ines, Rosado, Volodymyr, Babych, Faye, Morren, Charlotte, Young, Nicola, Vaughan-Jones, Stephanie, Harris, Karen, Burns, Carmel, Georgiev, Rosina, Shayamano, Ian, Kerslake, Peter, Creber, Ana, Vochin, Catherine, O'Brien, Paul, Caddell, Samantha, Hagan, Mandy, Hughes, Tomasz, Torlinski, James, Sherwin, Santhana, Kannan, Amber, Markham, Richard, Lebon, Jason, Cupitt, Julius, Cranshaw, Nigel, White, Victoria, Marriott, Wendy, Milner, Casiano Barrera Groba, Joao, Azoia, Petra, 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A.S., Goller, S., Afonso, E., Larina, E., Labeau, Sonia O. 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[0000-0003-2145-0345], Apollo - University of Cambridge Repository, Critical Care, Labeau S.O., Afonso E., Benbenishty J., Blackwood B., Boulanger C., Brett S.J., Calvino-Gunther S., Chaboyer W., Coyer F., Deschepper M., Francois G., Honore P.M., Jankovic R., Khanna A.K., Llaurado-Serra M., Lin F., Rose L., Rubulotta F., Saager L., Williams G., Blot S.I., Muzha D., Ribas A.M., Lipovesty F., Loudet C., Eller P., Mostafa N., Telleria V.M., Smajic J., Nogueira P.C., Nafees K.M.K., Hentchoya R., Soledad J., Cardenas Y., Reyes A.G., Sustic A., Mpouzika M., Vymazal T., Jensen H.I., Aguirre-Bermeo H., Maddison L., Valta M., Bloos F., Adipa F.E., Koulouras V., Enamorado J., Agoston Z., Birgisdottir H., Gupta A., Gurjar M., Kilapong B., Hashemian S.M., Martin-Loeches I., Cortegiani A., Fletcher K., Hayashi Y., Waweru-Siika W., Abidi K., Lee S.-M., Hadri B., Dolgusevs M., Abillama F.F., Jovaisa T., Thix C., Elhadi M., Nor B.M., Ratnam S., Mazlan M.Z., Maiyalagan S., Sanchez-Hurtado L., Belii A., 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N.N., Jansson E.B., Malvemyr A.-S., Johansson L., Sandberg U., Tingsvik C., Mattsson G., Lof G., Spangfors M., Ringdal M., Geijer S., Orvelius L., Hylen M., Lagerhall C., Akerman E., Hellkvist V.H., Mickelsson U., Wahlbom E., Larsson I.-M., Wallin E., Boroli F., Ory S., Jong M.L., Dullenkopf A., Lang M., Fleury Y., Maus M., Ben-Hamouda N., Fishman A., Hsu M.Y., Chang S.C., Trongtratul K., Sawawiboon C., Morakul S., Khwannimit B., Singh K., Ventour D., Figaro-Barclay D., Sankar-Maharaj S., Mebazaa M.S., Kamoun S., Elatrous S., Besbes L., Abroug F., Naija W., Elhechmi Y.Z., Sellami W., Hajjej Z., Merhabene T., Talik I., Kuscu O.O., Dilek O., Zerman A., Dal H.C., Turan S., Aydemir S., Yilmaz H., Calili D.K., Izdes S., Cengiz M., Gumus A., Tasdemir B., Kagnici A., Ay M., Ay S.A., Caliskan G., Akbas T., Balbay A.O., Efe S., Inal V., Elay G., Karabacak P., Ozserezli B., Senturk E., Demirkiran O., Bozbay S., Erdogan E., Akker M., Peker N., Ozgultekin A., Serin S.O., Turan C., Karaoren G., Goksu S., Karakurt S., Arikan H., Gul F., Cinel I., Kara I., Undar H.N., Bayraktar Y.S., Celik J.B., Tokur M.E., Aydin D.T., Yildiz I., Ozcan B., Erdivanli B., Eroglu A., Akdag D., Unlu N., Dungca A., Ali A., Thankamma B., Reyes P.E., John S., Rajendran A., Ahmad F.K.E., Smiley K.A., Hojden S., Miller M.T., Das Sasidharan Nair V., Antonio M.G.S., Qawasmeh K.A., Shawish S.A., Twiggs H., Rosado I., Babych V., Morren F., Young C., Vaughan-Jones N., Harris S., Burns K., Georgiev C., Shayamano R., Kerslake I., Creber P., Vochin A., O'Brien C., Caddell P., Hagan S., Hughes M., Torlinski T., Sherwin J., Kannan S., Markham A., Lebon R., Cupitt J., Cranshaw J., White N., Marriott V., Milner W., Groba C.B., Azoia J., Polgarova P., George S., Kapoor R., Lynch C., Fox N., Cranmer K., Llewellym T., Matthews K., Maltby L., Ibao J., Boulton K., Jarman R., Baxter K., Raj A.S., Moghal A., White J., Barrowcliffe S., Pulletz M., Ganeshalingam V., Baruah R., Baker H., Woods J., Ei P.P., Ogbeide V., Hayden P., Hughes J., Balasubramanian M., Salberg A., Saha R., Holmquist D., Derbyshire C., Smith N., Stones E., Ademokun J., Legorburo M.S., North S., Brett C., Jaundoo H., Craig J., Whiteley S., Howcroft C., Wilby L., Delve P., Shaw D., Williams K., Welters I.D., McMullen J., Brett S., Flores L., Trueman-Dawkins T., Templeton M., Adams J., Prowle J., Byers H., McDonnell A., Rose B.O., Reece-Anthony R., Mendes L., Vizcaychipi M., Bull R., Lacaden G., Santiago E., Delgado C.C., Farnell-Ward S., Thorpe E., Somerville J., Williams A., Cummings D., Derrick H., Brumwell S., Randell C., McCann N., Aves E., Berry G., Szakmany T., Gunter U., Pulak P., Sarkar N., Wright K., Gomes V., Jones J., Palfrey R., Camsooksai J., Lewis A., Eneas A., Tridente A., Barr L., Thomas B., Parkin E., Horner D., Frey C., Bench S., Baumber R., Broadhurst P., Jackson M., Williams L., Clark M., Paddle J., Bean S., Buckley S., Palfreeman C., Liu S., Allison N., Attwood B., Parsons P., Houghton V., Turner S.J., Higgins D., Bielskute E., Horrigan N., Jacob R., Habgood K., Zaki A., Collins A., Lord J., Ramiro C., Kubisz-Pudelko A., Kotze M., Williams H., Iovenko I., Tsarev A., Briva A., Mendez G., Napolitano L., Teig M., Rodriguez G.E., Ben-Jacob T., Potestio C., Eng T., Mahanes D., Khanna A., Duggal A., Nananmori M., Lois M., Karamchandani K., Bealer C., Barefield C., Terry D., Fivecoat P., Idowu O., Cata J., Clesi T., Peterson J., Hatton K., Dhaliwal J., Mueller D., Tao J., Eltorai A.S., Pastores S.M., Remor N., Salazar J., Barkas D., Joffe A., Barnes C., Sona C., Schallom M., Short J., Lorenzo J., Von Der Osten I., Borkowska M., Demarre L., Pleitinckx V., Xing C., Debue A.-S., Goller S., Larina E., Labeau, S. O., Blackwood, B., Brett, S. J., Deschepper, M., Francois, G., Honore, P. M., Khanna, A. K., Williams, G., Blot, S. I., Ribas, A. M., Telleria, V. M., Nogueira, P. C., Nafees, K. M. K., Reyes, A. G., Jensen, H. I., Adipa, F. E., Agoston, Z., Hashemian, S. M., Lee, S. -M., Abillama, F. F., Nor, B. M., Mazlan, M. Z., Sanchez-Hurtado, L., De lange, D., Ilesanmi, R. E., Ffarcsi, M. H., Hernandez, A. M., Schefold, J. C., Besbes, L. O., Minope, J. T. S., Rostello, O. F., Bartoli, J. R., Nocheretti, M. G., Escalante, R. G., Loudet, C. I., Gonzalez, A. L., Alvarez, G. A., Campos, P. A., Fonseca, I. P., Alvarez, G. M., Bascary, C. A., del Valle Gimenez, G., Bertoletti, F. P., Bonsignore, P. J. M., Fernandez, M. A., Leslie, G. D., Mclucas, A., Jacquet, L. -M., de Almeida, A. O., Jorge, S. A., Schmidt, R. C., Garcia, P. C., Ronchini, A. L. V., Manap, N. B. A., Laizner, A. M., Mcquirter, M., Kampayana, B. S., Sepulveda, M. I., Zamorano, M. J. F., Zhao, R. H., Hu, L. P., Jiao, Q. F., Wang, H. Y., Xia, C. J., Insu, L., Zhu, J. Y., Zhu, J. F., Huang, R. F., Wang, L. L., Song, J. H., Liu, X. M., Li, Z. S., Li, L. C., Zeng, J. M., Hu, X. C., Wang, R. X., Tak, P. S., Ho, S. W., Jiang, Q. X., Huang, L. P., Liu, X. L., Jiang, J. H., Gong, Y. Y., Lei, D. H., Bi, A. P., Zhao, H. M., Cao, Z. Q., Wu, S. F., Tian, X. F., Feng, Z. X., Liu, X. Z., Jiang, Z. X., Wang, G. X., Hu, R. L., Li, X. Q., Yu, Z. J., Yang, Y. X., Gama, L. M. S., Hernandez, J. S., Ochoa, M. -E., Reyes, A. J. G., Filipovic-Grcic, I., Vukovic, A., Pecenkovic, S., Suput, A., Radivojevic, R. C., Culjak, H., Adam, V. N., Pedersen, K. R., Kjaergard, I. E., Kodal, A. M., Hansen, T. C. B., Pedersen, A. S. B., Thomsen, T. D., Frandsen, T. M., Bliksted, I. A., Tamayo, L. M., Tutillo, D. R. M., Hurtado, C. V., Garcia, M. F., Kutimets, M., Lofqvist, C., Sakki, J. -K., Valta, M. A., Plantefeve, G., Deserts, M. D., Gunther, S. C., Timsit, J. -F., Farkas, J. -C., Bosl, K., Schuppel, S., Stubner, A., Osei, I. P., Kusi-Appiah, A. -C., Yakubu, Y. H., Patsiou, E. -C., Stalika, K. M. M., Enamorado, J. E., Jonasdottir, R. J., Lestari, M. I., Finn, D. O. C. R., Mcpherson, S., Ghioldi, D. M., Bruno, A. V., Maggiore, S. M., Volta, C. A., Taibi, M. R., Tranello, F. P., Giusti, G. D., Martin, M. A., Correia, M. C., Kim, J. H., Kim, K. C., Bae, J. -M., Park, S. Y., Park, T. S., Lee, H. B., Kim, S. C., Chee, H. K., Huh, J. W., Sim, Y. S., Ahn, J. -J., Kang, B. J., Lee, W. -Y., Lee, S. J., Feghaly, M. E., Belkhair, W. A., Tababa, O. W. E., Alkhumsi, S. I. R., Alshrif, A. I., Aboufray, A. A., Triki, A. R., Zahra, H. B., Al-Alawi, M. M. S., Ghula, M. A. A., Bahrin, L. K. K., Deva, S. R., Rahim, A. H. A., Hassan, W. N. W., Ismail, W. N. W., Ali, M. N., Khoo, T. M., Samat, N. M., Tong, J. M. G., Adib, N. A. N., Nor, M. B. M., Sulaiman, S. R., Foong, K. W., Hua, N. P., Zermeno, J. M., Nava, C. L. L., Nandyelly, S. J. R., Sanchez-Hurtado, L. A., Nava, L. P. A., Herrera, J. G., de Anda, G. F. V., Namendys-Silva, S. A., Romero-Gonzalez, J. P., Sosa, M. A., de Molina Serrano, J. I. R., Iburrigarro, S. R., Padilla, N. R. C., Pineda, A. A. V., Villafuerte, M. V. E., Herrera, M. O. G., Subedi, N. B., Pathak, S. D., Vermeijden, J. W., Gerritsen, R. T., Fijen, J. -W., Adejumo, P. O., Sankey, B. J., Olsen, B. F., Jensen, K. D., Johansen, B. F., Finnstrom, I. J., Skorstad, E. M., Lunde, G. A., Akselsen, G. R., Monstad, K. R., Hogvall, L., Malmin, S. K., Andersen, M. H., Hargott, R. F., de Jesus Ortiz, A., Cabral, D. M. B., Rivas, J. C., Moreira, M. L., Ellazar, C. G., Cerezo, F. D., Palo, J. E., Aperocho, C. A. J., Figueiredo, M. F., Pinheiro, C. M., Rita, C. S., Feranandes, A. M., Pinto, V. M. V., Bispo, B. M., Lima, A., Alsheikhly, A. S., Guran, C. T., Filipescu, D. C., Scutariu, M. A., Ebaid, M. S., Velickovic, D., Rajkovic, M., Stanojevic, M., Turcan, A., Lancaricova, D., Yeni, N. P., Syed, M. R., Navarro, J. A., De Pablo, A. M., Llinas, A. A., Lajara, M. A. G., Nieto, M. V., Pena, J. M. G., Gorgolas, M. C., Isasi, M. A., Salva-Costa, V., Garzon-Tovar, C., Olivares, P. G., de Ceballos, J. P. G., Polo, A. B. C., del Mar Diaz Salcedo, M., Alvarez, J. D., Arcas, M. L. B., Gonzalez, J. I. T., de la Ventana, A. B. S., Calleja, P. L. -A., Alvarez, R. G., Zamora, P. S., Guerrero, A. O., Barreiro, E. M., Sanchez, L. C., Diaz, M. G., Muriel, D. S., Alonso, H. F., Fernandez, A. W., Pinan, I. S., Albaiceta, G. M., Fernandez, M. C. I., Abos, F. J. S., Chueca, R. M., Aguirre, L. G., Manosa, S. C., Luque, C. P., Losilla, M. R., Fores, M. T., del Rosario Villar Redondo, M., Arteta Arteta, D. S., Sanchez, M. A. H., Espinosa, C. P., Reyes, L. M., Domenech, L. C., Guillen, C. V., Alvarez, J. T., del Cotillo, M., Barrueco-Francioni, J. E., Conde, B. B., Blanco, M. P. S., Blasco, M. L., Clement, A. I., Sanz, L. C., Gonzalez, I. A., Cano, A. E., Nunez, C. R., Fernadez, I. L., Fernandez, A. A. M., Boedjawan, N. N., Jansson, E. B., Malvemyr, A. -S., Lof, G., Spangfors, M., Lagerhall, C., Akerman, E., Hellkvist, V. H., Larsson, I. -M., Jong, M. L., Hsu, M. Y., Chang, S. C., Mebazaa, M. S., Elhechmi, Y. Z., Kuscu, O. O., Dal, H. C., Calili, D. K., Izdes, S., Gumus, A., Tasdemir, B., Kagnici, A., Ay, S. A., Balbay, A. O., Ozserezli, B., Senturk, E., Serin, S. O., Gul, F., Cinel, I., Undar, H. N., Bayraktar, Y. S., Celik, J. B., Tokur, M. E., Aydin, D. T., Yildiz, I., Ozcan, B., Akdag, D., Unlu, N., Reyes, P. E., Ahmad, F. K. E., Smiley, K. A., Miller, M. T., Antonio, M. G. S., Qawasmeh, K. A., Shawish, S. A., Groba, C. B., Raj, A. S., Ei, P. P., Legorburo, M. S., Welters, I. D., Mcmullen, J., Mcdonnell, A., Rose, B. O., Delgado, C. C., Mccann, N., Turner, S. J., Rodriguez, G. E., Eltorai, A. S., Pastores, S. M., Demarre, L., and Debue, A. -S.
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Male ,Original ,medicine.medical_treatment ,artificial ,Critical Care and Intensive Care Medicine ,Medical and Health Sciences ,Pressure ulcer ,law.invention ,Decubitus epidemiology ,ICU ,Morbidity ,Mortality ,Outcome ,Pressure injury ,Risk factors ,Adult ,Aged ,Hospital Mortality ,Humans ,Patient Discharge ,Prevalence ,Risk Factors ,Intensive Care Units ,Respiration, Artificial ,0302 clinical medicine ,decubitus epidemiology ,pressure injury ,pressure ulcer ,outcome ,risk factors ,morbidity ,mortality ,law ,Medicine and Health Sciences ,adults ,Medicine ,Simplified Acute Physiology Score ,icu ,ziekenhuissterfte ,Immunodeficiency ,intensive care ,European Society of Intensive Care Medicine (ESICM) Trials Group Collaborators ,mannen ,volwassenen ,COST ,Intensive care unit ,STATE ,ULCERS ,Underweight ,medicine.symptom ,Life Sciences & Biomedicine ,Human ,medicine.medical_specialty ,risicofactoren ,Decubitus epidemiology, ICU, Pressure injury, Pressure ulcer, Outcome, Risk factors, Morbidity, Mortality ,pressure injuries ,Intensive Care Unit ,prevalentie ,NO ,1117 Public Health and Health Services ,DecubICUs Study Team ,03 medical and health sciences ,Critical Care Medicine ,Anesthesiology ,General & Internal Medicine ,Health Sciences ,ouderen ,Mechanical ventilation ,Science & Technology ,business.industry ,decubitus ,Risk Factor ,030208 emergency & critical care medicine ,1103 Clinical Sciences ,Odds ratio ,medicine.disease ,Emergency & Critical Care Medicine ,Confidence interval ,030228 respiratory system ,Emergency medicine ,kunstmatige ademhaling ,RISK-FACTORS ,business ,respiration - Abstract
Funder: European Society of Intensive Care Medicine; doi: http://dx.doi.org/10.13039/501100013347, Funder: Flemish Society for Critical Care Nurses, Purpose: Intensive care unit (ICU) patients are particularly susceptible to developing pressure injuries. Epidemiologic data is however unavailable. We aimed to provide an international picture of the extent of pressure injuries and factors associated with ICU-acquired pressure injuries in adult ICU patients. Methods: International 1-day point-prevalence study; follow-up for outcome assessment until hospital discharge (maximum 12 weeks). Factors associated with ICU-acquired pressure injury and hospital mortality were assessed by generalised linear mixed-effects regression analysis. Results: Data from 13,254 patients in 1117 ICUs (90 countries) revealed 6747 pressure injuries; 3997 (59.2%) were ICU-acquired. Overall prevalence was 26.6% (95% confidence interval [CI] 25.9–27.3). ICU-acquired prevalence was 16.2% (95% CI 15.6–16.8). Sacrum (37%) and heels (19.5%) were most affected. Factors independently associated with ICU-acquired pressure injuries were older age, male sex, being underweight, emergency surgery, higher Simplified Acute Physiology Score II, Braden score < 19, ICU stay > 3 days, comorbidities (chronic obstructive pulmonary disease, immunodeficiency), organ support (renal replacement, mechanical ventilation on ICU admission), and being in a low or lower-middle income-economy. Gradually increasing associations with mortality were identified for increasing severity of pressure injury: stage I (odds ratio [OR] 1.5; 95% CI 1.2–1.8), stage II (OR 1.6; 95% CI 1.4–1.9), and stage III or worse (OR 2.8; 95% CI 2.3–3.3). Conclusion: Pressure injuries are common in adult ICU patients. ICU-acquired pressure injuries are associated with mainly intrinsic factors and mortality. Optimal care standards, increased awareness, appropriate resource allocation, and further research into optimal prevention are pivotal to tackle this important patient safety threat.
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- 2021
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19. Elementary Literacy Coaching in 2021: What We Know and What We Wonder
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Jacy Ippolito, Rita M. Bean, and Allison Swan Dagen
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Pharmacology ,Linguistics and Language ,Modalities ,Point (typography) ,business.industry ,Download ,media_common.quotation_subject ,Public relations ,Coaching ,Language and Linguistics ,Literacy ,Wonder ,Professional learning community ,Reading (process) ,Pharmacology (medical) ,business ,Psychology ,media_common - Abstract
As schools continue to focus on elementary student achievement and literacy growth, the role of the elementary school‐based literacy coach is as imperative as ever. However, as a lever for reform and professional learning, the literacy coach role remains underspecified, variable, and often misunderstood in practice. This article aims to address what is currently known and what still needs to be learned about coaching effectiveness, roles and relationships, shifting practices and modalities, and preparation. The coaching “knowns” are framed by both research and practice literature published over the past three decades, whereas the “wonderings” cut across research, practice, and policy and point toward the future of coaching work. Together, these knowns and wonderings are intended to provoke district and school leaders, coaches, and preparation providers to reconsider the power and possibilities of school‐based elementary coaching as schools regain their footing following the COVID‐19 global pandemic. [ABSTRACT FROM AUTHOR] Copyright of Reading Teacher is the property of Wiley-Blackwell and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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- 2021
20. Hamsters and Gerbils
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Andrew D. Bean
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business.industry ,Medicine ,business - Published
- 2021
21. Longitudinal patterns of food insecurity, the home food environment, and parent feeding practices during COVID‐19
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Melanie K. Bean, Laura J. Caccavale, Elizabeth L. Adams, and Danyel Smith
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0301 basic medicine ,Coronavirus disease 2019 (COVID-19) ,Endocrinology, Diabetes and Metabolism ,coronavirus ,parent feeding ,030209 endocrinology & metabolism ,03 medical and health sciences ,0302 clinical medicine ,Environmental health ,food insecurity ,Pandemic ,medicine ,Economic impact analysis ,Internal medicine ,030109 nutrition & dietetics ,Nutrition and Dietetics ,Food security ,business.industry ,pandemic ,digestive, oral, and skin physiology ,Repeated measures design ,medicine.disease ,Obesity ,RC31-1245 ,Food insecurity ,nutrition ,Original Article ,business ,Food environment ,child weight - Abstract
Background The economic impacts of the coronavirus disease 2019 (COVID‐19) have drastically increased food insecurity in the United States. Initial data, collected a few months into the pandemic, showed that families, particularly those experiencing food insecurity, reported detrimental changes to their home food environment and parent feeding practices, compared to before COVID‐19. Objective This follow‐up study obtained longitudinal data from a sample of parents in the United States to quantify changes in food security status, the home food environment, and parent feeding practices, from before to across COVID‐19 as the pandemic continued to persist. Methods Parents (N = 433) completed online surveys May (T1) and September (T2) 2020 during COVID‐19. Food security, home food environment, and parent feeding practices were reported at each timepoint. At T1, parents also retrospectively reported on these factors pertaining to before COVID‐19. Chi square analyses and repeated measure mixed models examined associations among study variables. Results Low or very low food security increased from before COVID‐19 (37%) to T1 (54%) and decreased by T2 (45%). About 30% of families who became food insecure, and 44% who stayed food insecure from T1 to T2, reported a decrease in total food in their home; only 3%–6% who became/stayed food secure reported this decrease. Parents' concern for child overweight and use of monitoring increased from before COVID‐19 to T1, and decreased by T2, but remained elevated above pre–COVID‐19 values. Conclusion Rates of food insecurity remain high as this pandemic persists. Continued assessment of nutrition‐related factors and increased economic supports are critical for families to endure COVID‐19 and prevent long‐term obesity and health risks.
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- 2021
22. Next-generation sequencing for constitutional variants in the clinical laboratory, 2021 revision: a technical standard of the American College of Medical Genetics and Genomics (ACMG)
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Lisa M. Vincent, Elizabeth C. Chao, Vandana Shashi, Heidi L. Rehm, Catherine Rehder, Soma Das, Julianne M. O’Daniel, Lora J. H. Bean, Wendy K. Chung, and David P. Bick
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medicine.medical_specialty ,medicine.diagnostic_test ,business.industry ,Computer science ,Medical laboratory ,Genomics ,Data science ,Human genetics ,DNA sequencing ,Informatics ,medicine ,Medical genetics ,business ,Genetics (clinical) ,Exome sequencing ,Genetic testing - Abstract
Next-generation sequencing (NGS) technologies are now established in clinical laboratories as a primary testing modality in genomic medicine. These technologies have reduced the cost of large-scale sequencing by several orders of magnitude. It is now cost-effective to analyze an individual with disease-targeted gene panels, exome sequencing, or genome sequencing to assist in the diagnosis of a wide array of clinical scenarios. While clinical validation and use of NGS in many settings is established, there are continuing challenges as technologies and the associated informatics evolve. To assist clinical laboratories with the validation of NGS methods and platforms, the ongoing monitoring of NGS testing to ensure quality results, and the interpretation and reporting of variants found using these technologies, the American College of Medical Genetics and Genomics (ACMG) has developed the following technical standards.
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- 2021
23. Pre-sleep cognitive arousal exacerbates sleep disturbance in chronic pain: an exploratory daily diary and actigraphy study
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Arier C Lee, Juliette C Horne, Malcolm H Johnson, and Debbie J. Bean
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Arousal ,03 medical and health sciences ,Cognition ,0302 clinical medicine ,medicine ,Insomnia ,Humans ,030212 general & internal medicine ,Sleep disorder ,business.industry ,Chronic pain ,Actigraphy ,medicine.disease ,Anesthesiology and Pain Medicine ,Mood ,Neurology (clinical) ,Chronic Pain ,medicine.symptom ,Sleep onset ,Sleep ,business ,030217 neurology & neurosurgery ,Clinical psychology - Abstract
Objectives Insomnia is commonly comorbid with chronic pain, and typically leads to worse outcomes. Two factors that could contribute to a cycle of pain and sleeplessness are pre-sleep cognitive arousal (repetitive thought processes) and low mood. This study aimed to examine how pain, sleep disturbance, mood, and pre-sleep cognitive arousal inter-relate, to determine whether low mood or pre-sleep cognitive arousal contribute to a vicious cycle of pain and insomnia. Methods Forty seven chronic pain patients completed twice daily diary measures and actigraphy for one week. Analyses investigated the temporal and directional relationships between pain intensity, sleep quality, time awake after sleep onset, anhedonic and dysphoric mood, and pre-sleep cognitive arousal. Fluctuations in predictor variables were used to predict outcome variables the following morning using mixed-effects modelling. Results For people with chronic pain, an evening with greater pre-sleep cognitive arousal (relative to normal) led to a night of poorer sleep (measured objectively and subjectively), lower mood in the morning, and a greater misperception of sleep (underestimating sleep). A night of poorer sleep quality led to greater pain the following morning. Fluctuations in pain intensity and depression did not have a significant influence on subsequent sleep. Conclusions For people with chronic pain, cognitive arousal may be a key variable exacerbating insomnia, which in turn heightens pain. Future studies could target cognitive arousal to assess effects on sleep and pain outcomes.
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- 2021
24. Integrating a Sport-Based Trauma-Sensitive Program in a National Youth-Serving Organization
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M. Rojas, L. Bergholz, Tanya Forneris, M. Ali, Majidullah Shaikh, and Corliss Bean
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Community organization ,Participatory action research ,Article ,Knowledge translation ,03 medical and health sciences ,0302 clinical medicine ,0501 psychology and cognitive sciences ,Sociology ,Duration (project management) ,Child ,Evaluation ,business.industry ,05 social sciences ,Scale-out ,General Social Sciences ,030229 sport sciences ,Public relations ,Focus group ,Community-engaged ,General partnership ,Thriving ,Club ,business ,Social Sciences (miscellaneous) ,050104 developmental & child psychology - Abstract
There is a pressing need to equip youth-serving community organizations to respond to the unique needs of trauma-exposed children. Early prevention measures can be an effective means of redirecting children to self-regulatory healing, while facilitating their transition toward strength-based thriving. Sport can offer a powerful opportunity to reach these children; however there remains little information on how to effectively develop, deliver, evaluate, and sustain trauma-sensitive sport programs in a community context. The purpose of this paper is to outline a case study of integrating sport-based trauma-sensitive practices with BGC Canada’s national Bounce Back League program. An interdisciplinary partnership of academic, community, and practice experts used a community-based participatory action research approach, paired with a knowledge translational approach, to guide the process of program development. Mixed methods (e.g., surveys, logbooks, interviews, focus groups, online communications) were used to generate ongoing insights of staff’s training experiences, successes and challenges of program implementation, and potential impact of program on club members. Several stages of program development are described, including: (a) collaboratively planning the program; (b) piloting the program to three clubs; (c) adapting the program using pilot insights; (d) expanding the adapted program to ten clubs; and (e) creating opportunities to maintain, sustain, and scale-out practices throughout grant duration and beyond. Lessons learned regarding the leadership team’s experiences in terms of developing, adapting, and integrating trauma-sensitive practices in this community context are shared. Supplementary Information The online version contains supplementary material available at 10.1007/s10560-021-00776-7.
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- 2021
25. DNA-based screening and personal health: a points to consider statement for individuals and health-care providers from the American College of Medical Genetics and Genomics (ACMG)
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Kristin G. Monaghan, Michael F. Murray, Robert C. Green, Lora J. H. Bean, Tracy L. Trotter, Maren T. Scheuner, Leslie G. Biesecker, Michael S. Watson, Cynthia M. Powell, Glenn E. Palomaki, and Richard R. Sharp
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medicine.medical_specialty ,business.industry ,Statement (logic) ,Family medicine ,Health care ,MEDLINE ,medicine ,Medical genetics ,Genomics ,Personal health ,business ,Genetics (clinical) - Published
- 2021
26. Sex-specific impact of diabetes mellitus on left ventricular systolic function and prognosis in heart failure
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Soongu Kwak, Jun Bean Park, Jin Joo Park, Jae-Hyeong Park, Goo Yeong Cho, and In-Chang Hwang
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Blood Glucose ,Male ,medicine.medical_specialty ,Science ,Cardiology ,Systolic function ,Disease ,Kaplan-Meier Estimate ,030204 cardiovascular system & hematology ,Independent predictor ,Risk Assessment ,Article ,Diabetes Complications ,03 medical and health sciences ,Ventricular Dysfunction, Left ,0302 clinical medicine ,Sex Factors ,Risk Factors ,Internal medicine ,Diabetes mellitus ,medicine ,Humans ,030212 general & internal medicine ,Mortality ,Aged ,Aged, 80 and over ,Heart Failure ,Multidisciplinary ,business.industry ,Hazard ratio ,Middle Aged ,medicine.disease ,Prognosis ,Sex specific ,Confidence interval ,Cardiovascular diseases ,Echocardiography ,Heart failure ,Heart Function Tests ,Medicine ,Female ,business ,Biomarkers - Abstract
Background: Diabetes mellitus (DM) aggravates the clinical features and outcomes of heart failure (HF). However, the sex-specific cardiovascular consequence of DM in HF patients remains unclear. We aimed to investigate the sex differences in associations of DM with echocardiographic phenotypes and clinical outcomes of HF.Methods: We studied 4,180 patients admitted for acute HF between 2009 and 2016 (median follow-up, 31.7 months), whose left ventricular global longitudinal strain (LV-GLS) data were available. Patients were compared by sex and DM. Structural equation model (SEM) analysis was performed to evaluate the moderating effects of two causal paths, via ischemic heart disease (IHD) and LV-GLS, linking DM with mortality by sex. Results: Among 1,431 patients with HF and DM (34.2%), women had more preserved LV systolic function, whereas men had more ischemic etiology. Compared to non-diabetic women, diabetic women had lower LV-GLS (11.3% versus 10.1%, pConclusions: DM increases the mortality risk in HF irrespective of sex. However, the main driver leading to mortality differed by sex, suggesting the importance of sex-specific strategies for HF management.
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- 2021
27. Reverse remodelling by sacubitril/valsartan predicts the prognosis in heart failure with reduced ejection fraction
- Author
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Hyung Kwan Kim, Goo Yeong Cho, Yeonyee E. Yoon, In Chang Hwang, Wonsuk Choi, Mi Gil Moon, Yong Jin Kim, Seung Pyo Lee, and Jun Bean Park
- Subjects
Cardiac function curve ,medicine.medical_specialty ,030204 cardiovascular system & hematology ,Sacubitril ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,Original Research Articles ,medicine ,Left atrial enlargement ,Humans ,Diseases of the circulatory (Cardiovascular) system ,030212 general & internal medicine ,Original Research Article ,Sacubitril/valsartan ,Reverse remodelling ,Retrospective Studies ,Heart Failure ,Ejection fraction ,business.industry ,Aminobutyrates ,Biphenyl Compounds ,Angiotensin receptor‐neprilysin inhibitor ,Stroke Volume ,medicine.disease ,Prognosis ,Heart failure with reduced ejection fraction ,Pulmonary hypertension ,Drug Combinations ,Valsartan ,Heart failure ,RC666-701 ,Cardiology ,Neprilysin ,Cardiology and Cardiovascular Medicine ,business ,Sacubitril, Valsartan ,medicine.drug - Abstract
Aims Despite well‐established benefits of sacubitril/valsartan for cardiac reverse remodelling and the prognosis of patients with heart failure with reduced ejection fraction (HFrEF), there are some patients with limited therapeutic response, even with optimal therapy. We assessed the treatment response to sacubitril/valsartan in patients with HFrEF, focusing on the association between reverse remodelling and the prognosis. Methods and results Using a retrospective cohort of consecutive patients with HFrEF treated with sacubitril/valsartan, we compared the time trajectory of cardiac function in 415 patients (1258 echocardiograms), according to the occurrence of cardiovascular death and hospitalization for HF during a median follow‐up of 19.1 (interquartile range, 10.9–27.6) months. A higher sacubitril/valsartan dose was associated with a better prognosis, whereas advanced age, diabetes, left ventricular (LV) hypertrophy, left atrial enlargement, and pulmonary hypertension were associated with a worse prognosis. Patients without an event (n = 337; 81.2%) showed LV reverse remodelling (LV ejection fraction ≥45% or LV end‐systolic volume reduction by 15% from baseline), which was typically observed within 6 months of sacubitril/valsartan treatment. Reverse remodelling achievement was significantly associated with a better prognosis. However, patients without reverse remodelling had a worse prognosis, as poor as that in patients with HFrEF not treated with sacubitril/valsartan. Conclusions In patients with HFrEF treated with sacubitril/valsartan, LV reverse remodelling reflects the treatment response and predicts the prognosis, whereas a lack of reverse remodelling indicates the lack of treatment benefits. Prediction and assessment of reverse remodelling may facilitate the selection of patients with greater benefits by sacubitril/valsartan.
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- 2021
28. Revised Korean Society of Infectious Diseases/National Evidence-based Healthcarea Collaborating Agency Guidelines on the Treatment of Patients with COVID-19
- Author
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Jimin Kim, Joon Sup Yeom, Su Jin Jeong, Eun Jeong Joo, Sun Bean Kim, Kyong Ran Peck, Kyungmin Huh, Miyoung Choi, Youn Jeong Kim, Young Kyung Yoon, Yu Bin Seo, Won Suk Choi, Yae Jean Kim, Su Yeon Yu, and Jung Yeon Heo
- Subjects
medicine.medical_specialty ,Coronavirus disease 2019 (COVID-19) ,medicine.drug_class ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Severe disease ,Monoclonal antibody ,03 medical and health sciences ,Special Article ,0302 clinical medicine ,Agency (sociology) ,medicine ,Pharmacology (medical) ,030212 general & internal medicine ,Intensive care medicine ,0303 health sciences ,Korea ,biology ,030306 microbiology ,business.industry ,COVID-19 ,Clinical trial ,Infectious Diseases ,biology.protein ,Evidence based healthcare ,Anti-SARS-CoV-2 monoclonal antibody ,Antibody ,business - Abstract
Neutralizing antibodies targeted at the receptor-binding domain of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike protein have been developed and now under evaluation in clinical trials. The US Food and Drug Administration currently issued emergency use authorizations for neutralizing monoclonal antibodies in non-hospitalized patients with mild to moderate coronavirus disease 2019 (COVID-19) who are at high risk for progressing to severe disease and/or hospitalization. In terms of this situation, there is an urgent need to investigate the clinical aspects and to develop strategies to deploy them effectively in clinical practice. Here we provide guidance for the use of anti-SARS-CoV-2 monoclonal antibodies for the treatment of COVID-19 based on the latest evidence.
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- 2021
29. Depression Moderates Physical Functioning Over Time in Survivors of Cancer
- Author
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Patricia M. Bamonti, Aanand D. Naik, Jonathan F. Bean, Jennifer Moye, and Rachel E. Weiskittle
- Subjects
Oncology ,Physical functioning ,Oncology (nursing) ,business.industry ,Rehabilitation ,medicine ,Cancer ,Physical Therapy, Sports Therapy and Rehabilitation ,medicine.disease ,business ,Depression (differential diagnoses) ,Article ,Clinical psychology - Abstract
BACKGROUND: Cancer survivors are at risk for declines in physical functioning (PF). The strongest predictor of PF is prior PF. Clinically significant depression predicts declines in PF; however, the extent to which depression symptoms moderate the association between self-reported and performance-based measures of PF over time is unknown. OBJECTIVE/PURPOSE: To examine whether level of depression symptoms in cancer survivors moderates the association of repeated self- and performance-based measures of PF at 6 and 18 months after cancer diagnosis. METHODS: Prospective, observational study with assessment at 6 (T1), 12 (T2), and 18 months after cancer diagnosis (T3). SETTING AND PATIENTS: Community-dwelling US veterans with newly diagnosed head and neck, esophageal, gastric, or colorectal cancers. MEASUREMENTS: Measures included demographics, cancer variables (type, stage, severity, and treatment), depression symptoms (Patient Health Questionnaire-9 [PHQ-9]), Short Physical Performance Battery (SPPB), and self-reported PF (Patient-Reported Outcomes Measurement Information System-29 [PROMIS-29]). RESULTS: Using hierarchical regression models, after adjustment for covariates, depression symptoms at T2 moderated the relationship between performance-based PF, SPPB (β = −0.24, P = .001) but not self-reported PF, PROMIS (β = −0.14, P = .05). In moderation analyses, SPPB T1 was only related to SPPB T3 when the PHQ-9 score was less than 9. LIMITATIONS: Majority White, male participants, did not measure chronicity of depression. CONCLUSIONS: Depression symptoms moderate the relationship of performance-based PF from baseline to 18 months.
- Published
- 2022
30. Fermentation and the microbial community of Japanese koji and miso : A review
- Author
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Lara Wakeling, Joanne G. Allwood, and David C. Bean
- Subjects
Seasoning ,030309 nutrition & dietetics ,Sodium Chloride ,03 medical and health sciences ,0404 agricultural biotechnology ,Japan ,Aspergillus oryzae ,Food microbiology ,Food science ,Fermentation in food processing ,Flavor ,0303 health sciences ,biology ,business.industry ,Microbiota ,Soy Foods ,food and beverages ,04 agricultural and veterinary sciences ,Food safety ,biology.organism_classification ,040401 food science ,Yeast ,Flavoring Agents ,Taste ,Fermentation ,Food Microbiology ,Soybeans ,business ,Food Science - Abstract
Miso is a well-known traditional Japanese fermented food, with a characteristic savory flavor and aroma, known predominately as the seasoning in miso soup. Miso production involves a two-stage fermentation, where first a mold, such as Aspergillus oryzae, is inoculated onto a substrate to make koji. A subsequent fermentation, this time by bacteria and yeast, occurs when the koji is added to a salt and soybean mash, with the miso left to ferment for up to 2 years. The microbial community of miso is considered essential to the development of the unique taste, texture, and nutritional profile of miso. Despite the importance of microorganisms in the production of miso, very little research has been undertaken to characterize and describe the microbial process. In this review, we provide an overview of the two-stage fermentation process, describe what is currently known about the microbial communities involved and consider any potential health benefits associated with the consumption of miso, along with food safety concerns. As the popularity of miso continues to expand globally and is produced under new environmental conditions, understanding the microbiological processes involved will assist to ensure that global production of miso is safe as well as delicious.
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- 2021
31. Washington Committee for Neurological Surgery: the evolution of neurosurgery’s involvement in public policy
- Author
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Ann R. Stroink, James R. Bean, and Katie O. Orrico
- Subjects
Washington ,medicine.medical_specialty ,Public policy ,AcademicSubjects/MED00930 ,Information Dissemination ,Neurosurgery ,Legislation ,Medicare ,Politics ,Special Article ,Medicare Fee Schedule ,Political advocacy ,Health care ,Emergency medical services ,Medicine ,Humans ,Health policy ,health care economics and organizations ,Aged ,business.industry ,Neuros/15 ,Health Policy ,Liability ,Federal politics ,Neurosurgical practice ,General Medicine ,US Congress ,United States ,Family medicine ,Current Procedural Terminology ,Surgery ,Neurology (clinical) ,business - Abstract
The American Association of Neurological Surgeons/Congress of Neurological Surgeons Washington Committee was formed in 1975 to establish a means for neurosurgery to influence federal health care policy. In response to growing federal health care legislation and regulation, the Washington Committee expanded from its original six members in 1975 to 35 invited liaisons and members by 2020. The Washington Committee, through the Washington Office, expanded political lobbying capacity into numerous important areas of health care policy, including Current Procedural Terminology coding and Medicare reimbursement, Federal Drug Administration (FDA) regulation, healthcare quality oversight, emergency medical services, treatment guidelines, treatment outcome registries, medical liability reform, research funding, and information dissemination. Over 45 yr, the Washington Committee has become an indispensable resource for shaping public policy affecting neurosurgery training, research, and practice.
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- 2021
32. Current advances in pharmacological treatments for patients with COVID-19
- Author
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Joon Sup Yeom and Sun Bean Kim
- Subjects
Drug ,medicine.medical_specialty ,business.industry ,media_common.quotation_subject ,Outbreak ,General Medicine ,Disease ,030204 cardiovascular system & hematology ,Virus ,Pathogenesis ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Immune system ,Tocilizumab ,chemistry ,Internal medicine ,medicine ,030212 general & internal medicine ,business ,Dexamethasone ,medicine.drug ,media_common - Abstract
Since the coronavirus disease 2019 (COVID-19) outbreak, more than 150 million people in over 200 countries have been infected, with over 3 million people dying due to it, as of May 1, 2021. Many researchers are working continuously to find effective drug treatments for COVID-19; however, the optimal treatment approach remains unclear. In this article, current advances in pharmacological treatments for patients with COVID-19 are discussed. Data obtained from recent studies indicate a mortality benefit with the administration of dexamethasone or adjunctive tocilizumab and potential clinical benefits with remdesivir (with or without baricitinib). Several monoclonal antibodies against severe acute respiratory syndrome coronavirus 2 have been developed. The US Food and Drug Administration issued two emergency use authorizations: one for bamlanivimab/etesevimab and another for casirivimab/imdevimab for patients with mild to moderate COVID-19, at high risk of progression to severe disease and/or hospitalization. The pathogenesis of COVID-19 indicates that antiviral treatments would be most beneficial in the early phase of the infection that is primarily driven by replication of severe acute respiratory syndrome coronavirus 2, whereas immunosuppressive/anti-inflammatory therapies are likely to be more beneficial during the late phase of the infection, when the disease is driven by an exaggerated immune/inflammatory response to the virus that causes tissue damage.
- Published
- 2021
33. Selinexor in combination with topotecan in patients with advanced or metastatic solid tumors: Results of an open-label, single-center, multi‐arm phase Ib study
- Author
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Filip Janku, Vivek Subbiah, Denái R. Milton, Deby C. Ogbonna, Abdulrazzak Zarifa, Shubham Pant, Kyaw Zin Thein, Rivka R. Colen, Sarina Anne Piha-Paul, Stacie Bean, Jing Gong, Jatin P. Shah, Apostolia Maria Tsimberidou, Aung Naing, Brett W. Carter, Lacey McQuinn, Daniel D. Karp, and Funda Meric-Bernstam
- Subjects
Adult ,Male ,0301 basic medicine ,medicine.medical_specialty ,Maximum Tolerated Dose ,Nausea ,medicine.medical_treatment ,Active Transport, Cell Nucleus ,Receptors, Cytoplasmic and Nuclear ,Selinexor ,Selective inhibitor of nuclear export (SINE) ,Karyopherins ,Neutropenia ,Gastroenterology ,03 medical and health sciences ,0302 clinical medicine ,Phase I Studies ,Neoplasms ,Internal medicine ,Antineoplastic Combined Chemotherapy Protocols ,medicine ,Humans ,Pharmacology (medical) ,Adverse effect ,Aged ,Pharmacology ,Chemotherapy ,Dose-Response Relationship, Drug ,business.industry ,Endometrial cancer ,Cancer ,Middle Aged ,Triazoles ,medicine.disease ,KPT 330 ,Hydrazines ,030104 developmental biology ,Oncology ,Metastatic solid tumors ,030220 oncology & carcinogenesis ,Vomiting ,Female ,Topotecan ,medicine.symptom ,business ,medicine.drug - Abstract
SummaryBackground Selinexor, a first-in-class, oral selective inhibitor of nuclear export (SINE) compound inhibits Exportin-1(XPO1), had demonstrated synergistic activity with many chemotherapies and conferred in vivo antitumor efficacy in hematologic as well as solid tumors. Methods This open-label, single-center, multi-arm phase 1b study used a standard 3 + 3 design and a “basket type” expansion. Selinexor with intravenous topotecan was given in one of the 13 parallel arms. Patients with advanced or metastatic relapsed/refractory solid tumors following prior systemic therapy, or in whom the addition of selinexor to standard chemotherapy deemed appropriate, were eligible. Results Fourteen patients with the median age of 61 years (range, 22–68years) were treated, and the most common cancer types were gynecological cancers; ovarian (n = 5), endometrial (n = 2), and 1 each with fallopian tube and vaginal cancers. Of the 14 patients treated, 12 (86 %) had at least one treatment-related adverse event (TRAE). The most common TRAEs were anemia (71 %), thrombocytopenia (57 %), hyponatremia (57 %), vomiting (57 %), fatigue (50 %), nausea (50 %), and neutropenia (36 %). Two patients had dose limiting toxicities. One patient dosed at selinexor 80 mg had grade 3 nausea and vomiting and one patient dosed at selinexor 60 mg experienced grade 4 neutropenia and thrombocytopenia. Of the 13 efficacy evaluable patients, one (8 %) with endometrial cancer achieved unconfirmed partial response (uPR) and the time-to-treatment failure (TTF) was 48 weeks, whereas 6 of the 13 (46 %) patients had stable disease (SD) contributing to the clinical benefit rate of 46 %. The median TTF for all patients was 9 weeks (range, 2–48weeks). Conclusions Once weekly selinexor in combination with topotecan was viable and showed some preliminary tumor efficacy. The recommend phase 2 dose of selinexor was 60 mg once weekly in combination with IV topotecan.Trial registration: NCT02419495. Registered 14 April 2015, https://clinicaltrials.gov/ct2/show/NCT02419495
- Published
- 2021
34. What Influences Outcomes From Inpatient Multidisciplinary Pain Management Programs?
- Author
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Debbie J Bean and Gwyn N. Lewis
- Subjects
medicine.medical_specialty ,Mindfulness ,MEDLINE ,Anxiety ,03 medical and health sciences ,0302 clinical medicine ,030202 anesthesiology ,Multidisciplinary approach ,medicine ,Humans ,Pain Management ,Depression (differential diagnoses) ,Inpatients ,business.industry ,Chronic pain ,medicine.disease ,Mental health ,Anesthesiology and Pain Medicine ,Meta-analysis ,Physical therapy ,Neurology (clinical) ,Chronic Pain ,medicine.symptom ,business ,030217 neurology & neurosurgery - Abstract
Objectives Although inpatient multidisciplinary pain management programs (PMPs) are effective for chronic pain, not all patients benefit equally and there is limited evidence regarding predictors of outcome. This meta-analysis aimed to identify patient or program characteristics associated with outcomes from inpatient PMPs, and to examine the time course of effects following discharge. Materials and methods Medline, EBSCO, and Scopus were searched to identify articles reporting outcomes from inpatient multidisciplinary PMPs. Information was extracted on study design, participant and program characteristics, and outcomes. Effect sizes were computed for pain, physical function, depression, anxiety, and mental health outcomes. Study-level predictors of outcome were investigated with moderator analyses and meta-regression. A risk of bias assessment and sensitivity analyses were conducted and the GRADE criteria for prognostic studies were applied to assess confidence in findings. Results In all, 85 studies (111 cohorts; 15,255 participants) were included. Three quarters of studies demonstrated low risk of bias. Larger effect sizes (for at least 1 outcome measure) occurred in studies where participants had more severe pain (greater intensity/longer duration), participants with alcohol or drug problems were not excluded, samples comprised mixed pain conditions, and programs included a cognitive component and/or a passive therapy component. Effect sizes for pain and physical function were maintained at follow-up, but effect sizes for depression and anxiety declined over time. Discussion Inpatient multidisciplinary PMPs may be well suited to patients with severe or long-lasting pain. Programs should adopt broad patient inclusion criteria, and outcomes were similar for programs based on cognitive-behavioral versus mindfulness/acceptance-based therapies.
- Published
- 2021
35. Spatial proteomic characterization of HER2-positive breast tumors through neoadjuvant therapy predicts response
- Author
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Rohan P. Joshi, Michael F. Press, Jennifer L. Caswell-Jin, Michelle Kriner, Zhicheng Ma, Joseph M. Beechem, Zoey Zhou, Gregory R. Bean, Margaret L. Hoang, Dennis J. Slamon, Jason J. Zoeller, Sara A. Hurvitz, Eran Kotler, Katherine McNamara, and Christina Curtis
- Subjects
Proteomics ,Oncology ,Cancer Research ,medicine.medical_specialty ,Receptor, ErbB-2 ,medicine.medical_treatment ,Breast Neoplasms ,Article ,ErbB-2 ,Breast cancer ,Clinical Research ,Internal medicine ,Antineoplastic Combined Chemotherapy Protocols ,Breast Cancer ,Humans ,Medicine ,Multiplex ,skin and connective tissue diseases ,Neoadjuvant therapy ,Cancer ,screening and diagnosis ,Chemotherapy ,Receiver operating characteristic ,business.industry ,Trastuzumab ,medicine.disease ,Neoadjuvant Therapy ,Clinical trial ,Detection ,Good Health and Well Being ,Cohort ,Biomarker (medicine) ,Immunohistochemistry ,Female ,business ,Receptor ,Biotechnology ,4.2 Evaluation of markers and technologies - Abstract
Addition of HER2-targeted agents to neoadjuvant chemotherapy has dramatically improved pathological complete response (pCR) rates in early stage Human epidermal growth factor receptor 2 (HER2)-positive breast cancer. Still, up to 50% of patients have residual disease following treatment and biomarkers predictive of response are urgently needed. We performed spatial proteomic characterization using NanoString GeoMX Digital Spatial Profiling (DSP) of 122 samples from 57 HER2-positive breast tumors from the neoadjuvant TRIO-US B07 clinical trial (discovery cohort, n=28; validation cohort, n=29) sampled pre-treatment, after 14-21 days of HER2-targeted therapy and at surgery. In situ quantification of 40 tumor and immune proteins across multiple pancytokeratin-enriched regions per sample revealed that treatment results in decreased HER2 signaling and increased immune infiltration after several weeks of therapy. These changes were more dramatic in tumors that ultimately undergo pCR, and a classifier trained to predict pCR using on-treatment and pre-treatment DSP protein levels had a cross-validation mean Area Under the Receiver Operating Characteristics (AUROC) of 0.733 in the discovery cohort and validated in an independent cohort (AUROC = 0.725). Thus, we demonstrate robust stratification of sensitive tumors early during neoadjuvant HER2-targeted therapy using a multiplex spatial proteomic biomarker with implications for tailoring subsequent therapy.
- Published
- 2021
36. Building Community-Engaged Multidisciplinary Partnerships to Improve Medication Management in Elderly Patients With Multiple Chronic Conditions
- Author
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Uche Anadu Ndefo, Ivy O Poon, Felicia Skelton, Lena R Bean, Creaque V Charles, Terica L Jemerson, Ngozi D. Mbue, and Dominique Guinn
- Subjects
medicine.medical_specialty ,Participatory action research ,patient-centered care ,elderly ,drugs ,03 medical and health sciences ,0302 clinical medicine ,Multidisciplinary approach ,medicine ,Narrative ,030212 general & internal medicine ,adverse reactions ,Workgroup ,polypharmacy ,Strategic planning ,Polypharmacy ,Social work ,business.industry ,030503 health policy & services ,multiple chronic conditions ,General Medicine ,side effects ,Family medicine ,Medicine ,Outcomes research ,0305 other medical science ,business - Abstract
Purpose Many studies in preventing adverse drug events have been researcher-driven, yet few have engaged patients in the development of a project. This project aims to engage minority elderly patients with multiple chronic conditions in the development of research questions and strategies to improve medication safety. Methods Elderly patients (≥65 years old) who were prescribed 7 or more chronic medications were recruited through a university-based aging resource network in a historically African American community in Houston, Texas. Patients and a caregiver participated in a multidisciplinary workgroup comprised of a physician, pharmacists, a nurse, health educators, and a social worker. Patients were engaged by utilizing the 4 patient-centered outcomes research engagement principles. The workgroup created a strategic plan, completed an environmental scan, identified research problems, and reviewed current evidence-based approaches in the literature. Workgroup findings were presented to a broader audience within a community town hall setting, and input was collected from a community-wide survey. Results From April 2018 to July 2018, 3 patients and 1 caregiver participated in 5 multidisciplinary workgroup meetings. A total of 74 seniors attended the town hall meeting, and 69 completed the surveys. The most common drug-related problems among survey participants were doubts about drug advertisements (79%) and drug interactions (70%). Most participants (88%) were more comfortable in receiving face-to-face counseling compared to an app or virtual visits. Findings aided in developing 3 grant proposals. Conclusions This narrative provides a roadmap for conducting multidisciplinary, patient-centered participatory research to refine research strategies in minimizing drug-related problems.
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- 2021
37. Genetic improvement technologies to support the sustainable growth of UK aquaculture
- Author
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Tim Regan, Herve Migaud, Tim P. Bean, Tim Ellis, Ross D. Houston, Andrew Davie, and Stefano Carboni
- Subjects
Atlantic salmon ,Ecology ,business.industry ,blue mussel ,Genomics ,Management, Monitoring, Policy and Law ,Aquatic Science ,Biology ,Pacific oyster ,Selective breeding ,biology.organism_classification ,rainbow trout ,Fishery ,Genome editing ,Aquaculture ,genomics ,genome editing ,Rainbow trout ,industry benefits ,Sustainable growth rate ,business ,selective breeding ,Blue mussel - Abstract
While the UK is the fourth largest aquaculture producer in Europe by volume, it is the second largest by value with an annual first sale value of around £1 billion. Over 90% of this value is from Atlantic salmon farmed in Scotland, but other finfish and shellfish aquaculture species are important to several UK regions. In this review, we describe the state of the art in UK aquaculture breeding and stock supply, and how innovation in genetics technologies can help achieve the Scottish Government’s ambitious target of doubling its aquaculture industry by 2030. Particular attention is given to the four most important UK aquaculture species: Atlantic salmon, rainbow trout, blue mussel and Pacific oyster, and we contrast the highly variable level of selective breeding and genomics technologies used in these sectors. A major factor in the success of Atlantic salmon farming has been large‐scale investment in modern breeding programmes, including family selection programmes and genomic selection. This has proven cost‐effective at scale, leading to improved production efficiency and reduction of some infectious diseases. We discuss the feasibility of applying similar technologies to the UK shellfish sectors, to ensure consistent and robust spat supply and begin trait selection. Furthermore, we discuss species‐specific application of modern breeding technologies in a global context, and the future potential of genomics and genome editing technologies to improve commercially desirable traits. Increased adoption of modern breeding technologies will assist UK aquaculture industries to meet the challenges for sustainable expansion, and remain competitive in a global market.
- Published
- 2021
38. Critical intelligence studies: introduction to the special issue
- Author
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Cristina Ivan, Peter de Werd, and Hamilton Bean
- Subjects
History ,Engineering ,Work (electrical) ,business.industry ,Political Science and International Relations ,Engineering ethics ,business ,Intelligence studies - Abstract
This introduction to the special issue describes recent developments in intelligence studies that support the establishment of a critical intelligence studies (CIS) subfield. It reviews work publis...
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- 2021
39. Medical assistance in dying and the meaning of care: Perspectives of nurses, pharmacists, and social workers
- Author
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Rachel Wortzman, Sally Bean, Anneliese Mills, Debbie Selby, and Kristin Bright
- Subjects
Canada ,Health (social science) ,media_common.quotation_subject ,Social Workers ,Pharmacy ,03 medical and health sciences ,0302 clinical medicine ,Nursing ,Informed consent ,Health care ,Humans ,030212 general & internal medicine ,Qualitative Research ,media_common ,Informed Consent ,Medical Assistance ,030504 nursing ,Social work ,business.industry ,Thematic analysis ,0305 other medical science ,Psychology ,business ,Psychosocial ,Autonomy ,Qualitative research - Abstract
Medical Assistance in Dying (MAiD) was legalized in Canada in 2016. While it has generated significant academic interest, the experiences of healthcare workers other than physicians remain understudied. This paper reports on a qualitative study of interprofessional Healthcare Providers (HCPs) involved in the provision of MAiD in order to: (1) characterize providers’ views about the care they offer in general; (2) examine whether or not they consider MAiD a form of care; and (3) explore their reasons for viewing or not viewing MAiD as care. Semi-structured qualitative interviews were conducted with ten nurses, eight social workers, and three pharmacists with firsthand experience delivering MAiD at an academic hospital in Toronto, Canada. The study was approved by the hospital’s REB. Written informed consent was obtained prior to participation. Codebook thematic analysis and template analysis generated four themes: (1) care as advocacy, (2) care as easing suffering, (3) care as psychosocial, and (4) care as relational. Every participant viewed MAiD as a form of care and drew on these four themes to authenticate MAiD as care. Participants consider MAiD a form of care for patients, families, other healthcare workers, and even themselves. In alternating and composite fashion, they describe MAiD in terms of autonomy, easing suffering, and a kind death for the dying (and those entrusted with their care)—a complex choreography of social discourses and moral logics that refuse to settle into a simple dichotomy of “choice versus care.” Participants depict MAiD in many of the same terms and imagery they use to describe the care they offer in general. In light of ongoing social controversies surrounding MAiD, HCPs utilize a range of logics strategically to repel negative attention and enable their participation in what they see as a caring end for their patients.
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- 2021
40. 'I Don’t Identify with It': A Qualitative Analysis of People’s Experiences of Living with Complex Regional Pain Styndrome
- Author
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Natalie L Tuck, Lisa M. Reynolds, Debbie J Bean, and Dana R Antunovich
- Subjects
Emotions ,Pain ,Identity (social science) ,03 medical and health sciences ,0302 clinical medicine ,030202 anesthesiology ,medicine ,Humans ,Social identity theory ,Qualitative Research ,Pain Measurement ,business.industry ,Perspective (graphical) ,General Medicine ,medicine.disease ,Distress ,Anesthesiology and Pain Medicine ,Complex regional pain syndrome ,Telephone interview ,Neurology (clinical) ,Thematic analysis ,business ,Complex Regional Pain Syndromes ,030217 neurology & neurosurgery ,Clinical psychology ,Qualitative research - Abstract
Objective Complex regional pain syndrome (CRPS) is a painful limb condition known to cause significant disability and distress. However, little previous research has explored CRPS from a patient perspective. The present qualitative study aimed to describe the experiences of people living with CRPS. Subjects Forty-eight people with CRPS participated in this research. Methods Participants completed a face-to-face or telephone interview about their perceptions and experiences of CRPS and completed three drawings to illustrate their experiences. Data were analyzed through reflexive thematic analysis, and images in drawings were grouped and coded by theme. Results Three overarching themes encapsulated the data, including that 1) people experience CRPS as a source of severe symptoms and emotional difficulties, 2) CRPS undermines personal and social identity, and 3) this results in psychological responses that protect against the emotional and social impact of severe symptoms. Psychological responses include: a) searching for an explanation, b) “nothing is my fault,” emphasizing a lack of personal responsibility and personal control, and c) detaching the limb from the self. Conclusions CRPS is experienced as highly threatening to physical ability, psychological state, and identity. In response to these threats, people may develop their own explanations for CRPS and may mentally detach themselves from responsibility, control, and the painful limb itself. Future research could explore the impact of these factors on psychological well-being and CRPS symptoms and outcomes.
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- 2021
41. Barriers and facilitators to influenza-like illness absenteeism among healthcare workers in a tertiary-care healthcare system, 2017–2018 influenza season
- Author
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Julie A Keating, Diep Hoang Johnson, Shabvon Johnson, Jero Bean, Linda Stevens, Daniel Shirley, Fauzia Osman, and Nasia Safdar
- Subjects
Microbiology (medical) ,medicine.medical_specialty ,Epidemiology ,Health Personnel ,Staffing ,03 medical and health sciences ,0302 clinical medicine ,Absenteeism ,Influenza, Human ,Health care ,Sore throat ,medicine ,Humans ,030212 general & internal medicine ,0303 health sciences ,Influenza-like illness ,030306 microbiology ,business.industry ,Odds ratio ,Cross-Sectional Studies ,Infectious Diseases ,Disciplinary action ,Family medicine ,Sick leave ,Seasons ,medicine.symptom ,business ,Delivery of Health Care - Abstract
Objective:Influenza can be introduced and propagated in healthcare settings by healthcare workers (HCWs) working while ill with influenza. However, reasons driving this behavior are unclear. In this study, we examined barriers to and facilitators of absenteeism during the influenza season.Design:Cross-sectional mixed methods study.Setting:Ambulatory and inpatient settings in a large, tertiary-care healthcare system.Methods:An anonymous electronic survey was sent to HCWs between June 11 and July 13, 2018, asking participants to self-report influenza-like illness (ie, ILI symptoms of fever, chills, cough, or sore throat) during the 2017–2018 influenza season. We conducted a logistical regression analysis to identify factors associated with absenteeism.Results:Of 14,250 HCWs, 17% responded to the survey. Although 1,180 respondents (51%) reported symptoms of ILI, 575 (43%) did not stay home while ill. The most commonly perceived barriers to ILI absenteeism included being understaffed (odds ratio [OR], 1.78; P = .04), unable to find a replacement for work (OR, 2.26; P = .03), desiring not to use time off (OR, 2.25; P = .003), and paid by the hour or unable to afford being absent (OR, 2.05; P = .02). Common perceived facilitators of absenteeism included support from coworkers and management, clearer policy, better sick days availability, and lower perceived threat of disciplinary action.Conclusions:Reporting to work with ILI symptoms is common among HCWs. Most barriers and facilitators are related to systems. Addressing system factors, such as policies regarding sick days and sick leave and ensuring adequate backup staffing, is likely to facilitate absenteeism among ill HCWs.
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- 2021
42. High rates of psychiatric comorbidity among requesters of medical assistance in dying: Results of a Canadian prevalence study
- Author
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Amy Nolen, Sally Bean, Elie Isenberg-Grzeda, and Debbie Selby
- Subjects
High rate ,Canada ,medicine.medical_specialty ,Medical Assistance ,business.industry ,Comorbidity ,Mental illness ,medicine.disease ,Tertiary care ,Suicide, Assisted ,030227 psychiatry ,03 medical and health sciences ,Psychiatry and Mental health ,Psychiatric comorbidity ,Cross-Sectional Studies ,0302 clinical medicine ,Family medicine ,Chart review ,Humans ,Medicine ,030212 general & internal medicine ,business ,Psychosocial ,Depression (differential diagnoses) ,Retrospective Studies - Abstract
Introduction Medical assistance in dying (MAID) was legalized in Canada in 2016. We aimed to characterize the prevalence of psychiatric comorbidity among MAID requesters in order to enhance clinicians' awareness of the potential for psychiatric needs among MAID requesters. Methods Using chart review, we retrospectively abstracted demographic, clinical, and psychosocial variables of MAID requesters at our institution, a 638-bed tertiary care center in Toronto, Canada. Patients requesting MAID between June 2016 and April 2019 were included. Psychiatric comorbidity was the primary dependent variable. Results 155 patients requested MAID during the study period. Among them, 60 (39%) had documented psychiatric comorbidity, most commonly depression (n=44; 73%). Severe mental illness accounted for 10 cases (6.5% of the total sample). Among patients with psychiatric comorbidity, 25 (41.7%) had at least one MAID eligibility assessment conducted by a psychiatrist, compared to 16 (16.8%) patients without psychiatric comorbidity (χ2=11.649, df=1, p=0.001). Among the 10 patients with severe mental illness (SMI), a psychiatrist conducted a MAID eligibility assessment in 8 patients (80%), compared to 17 patients (34%) without SMI (χ2=7.255, df=1, p=0.007). Conclusion Patients with psychiatric comorbidity comprise a substantial proportion of patients requesting MAID. These findings highlight the importance of recognizing the psychiatric needs of MAID requesters and involving psychiatry in MAID assessments when warranted. A gap still exists in understanding which factors are most important in determining the need for psychiatric involvement in MAID assessments. We propose recommendations borne from our clinical experience.
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- 2021
43. Progression of ascending aortopathy may not occur after transcatheter aortic valve replacement in severe bicuspid aortic stenosis
- Author
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Hyo-Soo Kim, Hyung Kwan Kim, Seung Pyo Lee, Dae Won Sohn, Jun Bean Park, Yong Jin Kim, Bon Kwon Koo, and Ji Hyun Jung
- Subjects
Male ,Aortic valve ,medicine.medical_specialty ,Seoul ,medicine.medical_treatment ,Population ,Cardiology ,Heart Valve Diseases ,aortic valve stenosis ,03 medical and health sciences ,Aortic aneurysm ,0302 clinical medicine ,Bicuspid aortic valve ,bicuspid ,Valve replacement ,Aortic valve replacement ,Internal medicine ,medicine.artery ,Ascending aorta ,Humans ,Medicine ,education ,Aged ,Retrospective Studies ,Aged, 80 and over ,education.field_of_study ,business.industry ,medicine.disease ,medicine.anatomical_structure ,Aortic Valve ,Aortic valve stenosis ,transcatheter aortic valve replacement ,Original Article ,030211 gastroenterology & hepatology ,business ,aortic aneurysm - Abstract
Background/Aims We evaluated changes in the ascending aorta dimension post-transcatheter aortic valve replacement (TAVR) in bicuspid aortic valve (BiAV) and tricuspid aortic valve (TAV) patients. Methods Patients with severe aortic stenosis undergoing TAVR at Seoul National University Hospital were consecutively recruited. Patients with less than 12 months’ follow-up and/or with an ascending aorta size larger than 50 mm were excluded. The ascending aorta size was measured on a parasternal long axis view using transthoracic echocardiography. Results Among the 67 patients who were included (age: 76.5 ± 6.5 years; male: 52.2%; AV area: 0.67 ± 0.15 cm2), 19 (28.4%) had BiAV; 48 (71.6%) had TAV. The median (interquartile ranges) follow-up duration was 398 days (361 to 451). BiAV patients were younger (73.2 ± 7.2 vs. 77.8 ± 5.8, p = 0.008), and had lower incidences of chronic renal disease (5.3% vs. 35.4%, p = 0.014) and history of coronary intervention (15.8% vs. 50.0%, p = 0.013), than TAV patients. On pre-procedural echocardiography, the ascending aorta dimensions in BiAV patients were larger than those in TAV patients (40.5 ± 3.8 mm vs. 35.9 ± 4.2 mm, p < 0.005). The ascending aorta dimension changed minimally during follow-up; post-TAVR, the ascending aorta’s growth rate was –0.11 ± 1.9 and 0.26 ± 1.8 mm/yr in patients with BiAV and TAV, respectively (p = 0.50). Progression of the ascending aorta’s dimension postTAVR was not clinically significant in BiAV patients. Conclusions The concern about the progression of aortopathy in BiAV patients post-TAVR may not be a clinical issue. This should be confirmed in studies with a larger population and with a longer follow-up duration.
- Published
- 2021
44. Genetic mechanisms of critical illness in COVID-19
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Pairo-Castineira, Erola, Clohisey, Sara, Klaric, Lucija, Bretherick, Andrew D, Rawlik, Konrad, Pasko, Dorota, Walker, Susan, Parkinson, Nick, Fourman, Max Head, Russell, Clark D, Furniss, James, Richmond, Anne, Gountouna, Elvina, Wrobel, Nicola, Harrison, David, Wang, Bo, Yang, Wu, Meynert, Alison, Griffiths, Fiona, Oosthuyzen, Wilna, Kousathanas, Athanasios, Moutsianas, Loukas, Yang, Zhijian, Zhai, Ranran, Zheng, Chenqing, Grimes, Graeme, Beale, Rupert, Millar, Jonathan, Shih, Barbara, Keating, Sean, Zechner, Marie, Haley, Chris, Porteous, David J, Hayward, Caroline, Yang, Jian, Knight, Julian, Summers, Charlotte, Shankar-Hari, Manu, Klenerman, Paul, Turtle, Lance, Antonia, Ho, Moore, Shona C, Hinds, Charles, Horby, Peter, Nichol, Alistair, Maslove, David, Ling, Lowell, Mcauley, Danny, Montgomery, Hugh, Walsh, Timothy, Pereira, Alexandre C, Renieri, Johnny, Millar, Alistair, Nichol, Tim, Walsh, Manu, Shankar-Hari, Chris, Ponting, Jen, Meikle, Paul, Finernan, Ellie, Mcmaster, Andy, 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Konrad [0000-0002-0010-370X], Walker, Susan [0000-0002-5016-6426], Fourman, Max Head [0000-0001-7381-2278], Russell, Clark D [0000-0002-9873-8243], Gountouna, Elvina [0000-0001-7870-2780], Wang, Bo [0000-0002-1580-797X], Wu, Yang [0000-0002-0128-7280], Kousathanas, Athanasios [0000-0001-6265-6521], Moutsianas, Loukas [0000-0001-5453-345X], Zhai, Ranran [0000-0002-5834-9120], Beale, Rupert [0000-0002-6705-8560], Keating, Sean [0000-0001-8552-5604], Haley, Chris [0000-0002-9811-0210], Porteous, David J [0000-0003-1249-6106], Hayward, Caroline [0000-0002-9405-9550], Yang, Jian [0000-0003-2001-2474], Knight, Julian [0000-0002-0377-5536], Summers, Charlotte [0000-0002-7269-2873], Shankar-Hari, Manu [0000-0002-5338-2538], Turtle, Lance [0000-0002-0778-1693], Moore, Shona C [0000-0001-8610-2806], Hinds, Charles [0000-0001-5094-8324], McAuley, Danny [0000-0002-3283-1947], Montgomery, Hugh [0000-0001-8797-5019], Renieri, Alessandra [0000-0002-0846-9220], Shen, Xia [0000-0003-4390-1979], 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B., Turner, V., Savill, H., Mccormick, J., Coulding, M., Siddiqui, S., Mercer, O., Rehman, H., Potla, D., Capps, N., Donaldson, D., Button, H., Martin, T., Hard, K., Agasou, A., Tonks, L., Arden, T., Boyle, P., Carnahan, M., Strickley, J., Adams, C., Childs, D., Rikunenko, R., Leigh, M., Breekes, M., Wilcox, R., Bowes, A., Tiveran, H., Hurford, F., Summers, J., Carter, A., Hussain, Y., Ting, L., Javaid, A., Motherwell, N., Moore, H., Millward, H., Jose, S., Schunki, N., Noakes, A., Clulow, C., Sadera, G., Jacob, R., Jones, C., Blunt, M., Coton, Z., Curgenven, H., Ally, S. M., Beaumont, K., Elsaadany, M., Fernandes, K., Ali Mohamed Ali, I., Rangarajan, H., Sarathy, V., Selvanayagam, S., Vedage, D., White, M., Truman, N., Chukkambotla, S., Keith, S., Cockerill-Taylor, J., Ryan-Smith, J., Bolton, R., Springle, P., Dykes, J., Thomas, J., Khan, M., Hijazi, M. T., Massey, E., Croston, G., Reschreiter, H., Camsooksai, J., Patch, S., Jenkins, S., Humphrey, C., Wadams, B., Msiska, M., Adanini, O., Attwood, B., Parsons, P., Tatham, K., Jhanji, S., Black, E., Dela Rosa, A., Howle, R., Thomas, B., Bemand, T., Raobaikady, R., Saha, R., Staines, N., Daniel, A., Finn, J., Hutter, J., Doble, P., Shovelton, C., Pawley, C., Kannan, T., Hill, M., Combes, E., Monnery, S., Joefield, T., Popescu, M., Thankachen, M., Oblak, M., Little, J., Mcivor, S., Brady, A., Whittle, H., Prady, H., Chan, R., Ahmed, A., Morris, A., Gibson, C., Gordon, E., Keenan, S., Quinn, H., Benyon, S., Marriott, S., Zitter, L., Park, L., Baines, K., Lyons, M., Holland, M., Keenan, N., Young, M., Garrioch, S., Dawson, J., Tolson, M., Scholefield, B., Bi, R., Richardson, N., Schumacher, N., Cosier, T., Millen, G., Higham, A., Turki, S., Allen, L., Crisp, N., Hazleton, T., Knight, A., Deery, J., Price, C., Turney, S., Tilbey, S., Beranova, E., Wright, D., George, L., Twiss, S., Wadd, S., Postlethwaite, K., Gondo, P., Masunda, B., Kayani, A., Hadebe, B., Whiteside, J., Clarke, N., Donnison, P., Trim, F., Leadbitter, I., Butcher, D., O'Sullivan, S., Purewal, B., Bell, S., Rivers, V., O'Leary, R., Birch, J., Collins, E., Anderson, S., Hammerton, K., Andrews, E., Burns, K., Edmond, I., Todd, A., Donnachie, J., Turner, P., Prentice, L., Symon, L., Runciman, N., Auld, F., Halkes, M., Mercer, P., Thornton, L., Debreceni, G., Wilkins, J., Crickmore, V., Subramanian, G., Marshall, R., Jennings, C., Latif, M., Bunni, L., Spivey, M., Bean, S., Burt, K., Linnett, V., Ritzema, J., Sanderson, A., Mccormick, W., Bokhari, M., Kapoor, R., Loader, D., Ayers, A., Harrison, W., North, J., Belagodu, Z., Paramsothy, R., Olufuwa, O., Gherman, A., Fuller, B., Stuart, C., Kelsall, O., Davis, C., Wild, L., Wood, H., Thrush, J., Durie, A., Austin, K., Archer, K., Anderson, P., Vigurs, C., Thorpe, C., Knights, E., Boyle, N., Price, A., Kubisz-Pudelko, A., Wood, D., Lewis, A., Board, S., Pippard, L., Perry, J., Beesley, K., Rattray, A., Lee, E., Lennon, L., Douglas, K., Bell, D., Boyle, R., Glass, L., Nauman Akhtar, M., Dent, K., Potoczna, D., Pearson, S., Horsley, E., Spencer, S., Mullan, D., Skinner, D., Gaylard, J., Barber, R., Hewitt, C., Hilldrith, A., Shepardson, S., Wills, M., Jackson-Lawrence, K., Gupta, A., Timlick, E., Gorman, C., Otahal, I., Gales, A., Coetzee, S., Sell, C., Raj, M., Peiu, M., Quaid, S., Watson, E., Elliott, K., Mallinson, J., Chandler, B., Turnbull, A., Finch, C., Holl, C., Cooper, J., Evans, A., Khaliq, W., Collins, A., Gude, E. T., Love, N., van Koutrik, L., Hunt, J., Kaye, D., Fisher, E., Brayne, A., Tuckey, V., Jackson, P., Parkin, J., Tariq, A., Houlden, H., Tucci, A., Hardy, J., Moncur, E., Highgate, J., Cowley, A., Mitra, A., Stead, R., Behan, T., Burnett, C., Newton, M., Heeney, E., Pollard, R., Hatton, J., Patel, A., Kasipandian, V., Allibone, S., Genetu, R. M., O'Brien, L., Omar, Z., Perkins, E., Davies, K., Tetla, D., Shelley, B., Irvine, V., Williams, S., Williams, P., Goodsell, J., Tutton, R., Bough, L., Winter-Goodwin, B., Kitson, R., Pinnell, J., Wilson, A., Nortcliffe, T., Wood, T., Home, M., Holdroyd, K., Robinson, M., Shaw, R., Greig, J., Brady, M., Haigh, A., Matupe, L., Usher, M., Mellor, S., Dale, S., Gledhill, L., Shaw, L., Turner, G., Kelly, D., Anwar, B., Riley, H., Sturgeon, H., Ali, A., Thomis, L., Melia, D., Dance, A., Humphreys, S., Frost, I., Gopal, V., Godden, J., Holden, A., Swann, S., Smith, T., Clapham, M., Poultney, U., Harper, R., Rice, P., Reece-Anthony, R., Gurung, B., Moultrie, S., Odam, M., Mayer, A., Bellini, A., Pickard, A., Bryant, J., Roe, N., Sowter, J., Lang, K., Taylor, J., Barry, P., Hobrok, M., Tench, H., Wolf-Roberts, R., Mcguinness, H., Loosley, R., Hawcutt, D., Rad, L., O'Malley, L., Saunderson, P., Seddon, G., Anderson, T., Rogers, N., Ruddy, J., Harkins, M., Beith, C., Mcalpine, A., Ferguson, L., Grant, P., Macfadyen, S., Mclaughlin, M., Baird, T., Rundell, S., Welsh, B., Hamill, R., Fisher, F., Gregory, J., Campbell, A., Smuts, S., Kenneth Baillie, J., Carson, G., Alex, B., Bach, B., Barclay, W. S., Bogaert, D., Chand, M., Cooke, G. S., Docherty, A. B., Dunning, J., da Silva Filipe, A., Fletcher, T., Green, C. A., Harrison, E. M., Hiscox, J. A., Ho, A. Y. W., Horby, P. W., Ijaz, S., Khoo, S., Lim, W. S., Mentzer, A. J., Merson, L., Meynert, A. M., Noursadeghi, M., Palmarini, M., Paxton, W. A., Pollakis, G., Price, N., Rambaut, A., Robertson, D. L., Sancho-Shimizu, V., Scott, J. T., de Silva, T., Sigfrid, L., Solomon, T., Sriskandan, S., Stuart, D., Tedder, R. S., Thomson, E. C., Thompson, A. A. R., Thwaites, R. S., Turtle, L. C. W., Zambon, M., Hardwick, H., Donohue, C., Lyons, R., Norman, L., Pius, R., Drake, T. M., Fairfield, C. J., Knight, S. R., Mclean, K. A., Murphy, D., Shaw, C. A., Dalton, J., Girvan, M., Saviciute, E., Roberts, S., Harrison, J., Marsh, L., Connor, M., Halpin, S., Gamble, C., Leeming, G., Wham, M., Greenhalf, W., Shaw, V., Mcdonald, S., Ganna, A., Sulem, P., van Heel, D. A., Cordioli, M., Sveinbjornsson, G., Niemi, M. E. K., Shelton, J. F., Shastri, A. J., Ye, C., Weldon, C. H., Filshtein-Sonmez, T., Coker, D., Symons, A., Esparza-Gordillo, J., Aslibekyan, S., Auton, A., Krieger, J. E., Marques, E., Jannes, C. E., Mari, F., Daga, S., Baldassarri, M., Benetti, E., Furini, S., Fallerini, C., Fava, F., Valentino, F., Doddato, G., Giliberti, A., Tita, R., Amitrano, S., Bruttini, M., Croci, S., Meloni, I., Pinto, A. M., Frullanti, E., Mencarelli, M. A., Rizzo, C. L., Montagnani, F., Di Sarno, L., Tommasi, A., Palmieri, M., Emiliozzi, A., Fabbiani, M., Rossetti, B., Zanelli, G., Bargagli, E., Bergantini, L., D'Alessandro, M., Cameli, P., Bennet, D., Anedda, F., Marcantonio, S., Scolletta, S., Franchi, F., Mazzei, M. A., Guerrini, S., Conticini, E., Cantarini, L., Frediani, B., Tacconi, D., Spertilli, C., Feri, M., Donati, A., Scala, R., Guidelli, L., Spargi, G., Corridi, M., Nencioni, C., Croci, L., Caldarelli, G. P., Spagnesi, M., Piacentini, P., Bandini, M., Desanctis, E., Cappelli, S., Canaccini, A., Verzuri, A., Anemoli, V., Ognibene, A., Vaghi, M., D'Arminio Monforte, A., Merlini, E., Mondelli, M. U., Mantovani, S., Ludovisi, S., Girardis, M., Venturelli, S., Sita, M., Cossarizza, A., Antinori, A., Vergori, A., Rusconi, S., Siano, M., Gabrieli, A., Riva, A., Francisci, D., Schiaroli, E., Scotton, P. G., Andretta, F., Panese, S., Scaggiante, R., Gatti, F., Parisi, S. G., Castelli, F., Quiros-Roldan, M. E., Magro, P., Zanella, I., Della Monica, M., Piscopo, C., Capasso, M., Russo, R., Andolfo, I., Iolascon, A., Fiorentino, G., Carella, M., Castori, M., Merla, G., Aucella, F., Raggi, P., Marciano, C., Perna, R., Bassetti, M., Di Biagio, A., Sanguinetti, M., Masucci, L., Valente, S., Mandala, M., Giorli, A., Salerni, L., Zucchi, P., Parravicini, P., Menatti, E., Baratti, S., Trotta, T., Giannattasio, F., Coiro, G., Lena, F., Coviello, D. A., Mussini, C., Bosio, G., Martinelli, E., Mancarella, S., Tavecchia, L., Crotti, L., Picchiotti, N., Gori, M., Gabbi, C., Sanarico, M., Ceri, S., Pinoli, P., Raimondi, F., Biscarini, F., Stella, A., Shen, X., Ponting, C. P., Fawkes, A., Tenesa, A., Caulfield, M., Scott, R., Rowan, K., Murphy, L., Openshaw, P. J. M., Semple, M. G., Vitart, V., and Wilson, J. F.
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0301 basic medicine ,Male ,CCR2 ,Chromosomes, Human, Pair 21 ,Genome-wide association study ,Receptor, Interferon alpha-beta ,Disease ,Bioinformatics ,Genome-wide association studies ,23andMe Investigators ,Interferon alpha-beta ,0302 clinical medicine ,Receptors ,2',5'-Oligoadenylate Synthetase ,Pair 12 ,genetics ,Lung ,BRACOVID Investigators ,Multidisciplinary ,GenOMICC Investigators ,Tyrosine kinase 2 ,030220 oncology & carcinogenesis ,Multigene Family ,Medical genetics ,Female ,Dipeptidyl-Peptidases and Tripeptidyl-Peptidase ,5'-Oligoadenylate Synthetase ,Human ,Receptor ,medicine.medical_specialty ,Critical Care ,Receptors, CCR2 ,General Science & Technology ,Critical Illness ,Chromosomes ,03 medical and health sciences ,Intensive care ,Mendelian randomization ,Immunogenetics ,medicine ,Humans ,Dipeptidyl-Peptidases and Tripeptidyl-Peptidases ,Gen-COVID Investigators ,Inflammation ,TYK2 Kinase ,Chromosomes, Human, Pair 12 ,Pair 19 ,SARS-CoV-2 ,business.industry ,Drug Repositioning ,COVID-19 ,United Kingdom ,COVID-19 Human Genetics Initiative ,030104 developmental biology ,Viral infection ,Chromosomes, Human, Pair 19 ,Genome-Wide Association Study ,Pharmacogenomics ,ISARICC Investigators ,Pair 21 ,2' ,business - Abstract
Host-mediated lung inflammation is present1, and drives mortality2, in the critical illness caused by coronavirus disease 2019 (COVID-19). Host genetic variants associated with critical illness may identify mechanistic targets for therapeutic development3. Here we report the results of the GenOMICC (Genetics Of Mortality In Critical Care) genome-wide association study in 2,244 critically ill patients with COVID-19 from 208 UK intensive care units. We have identified and replicated the following new genome-wide significant associations: on chromosome 12q24.13 (rs10735079,P=1.65×10−8) in a gene cluster that encodes antiviral restriction enzyme activators (OAS1,OAS2andOAS3); on chromosome 19p13.2 (rs74956615,P=2.3×10−8) near the gene that encodes tyrosine kinase 2 (TYK2); on chromosome 19p13.3 (rs2109069,P=3.98× 10−12) within the gene that encodes dipeptidyl peptidase 9 (DPP9); and on chromosome 21q22.1 (rs2236757,P=4.99×10−8) in the interferon receptor geneIFNAR2. We identified potential targets for repurposing of licensed medications: using Mendelian randomization, we found evidence that low expression ofIFNAR2, or high expression ofTYK2, are associated with life-threatening disease; and transcriptome-wide association in lung tissue revealed that high expression of the monocyte–macrophage chemotactic receptorCCR2is associated with severe COVID-19. Our results identify robust genetic signals relating to key host antiviral defence mechanisms and mediators of inflammatory organ damage in COVID-19. Both mechanisms may be amenable to targeted treatment with existing drugs. However, large-scale randomized clinical trials will be essential before any change to clinical practice.
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- 2020
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45. Ultrasound diagnosis of endometrial cancer by subjective pattern recognition in women with postmenopausal bleeding: prospective inter‐rater agreement and reliability study
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E. Bean, N. Thanatsis, Davor Jurkovic, M. Wong, K. Madhvani, and T. Amin
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medicine.medical_treatment ,Endometrium ,03 medical and health sciences ,Polyps ,0302 clinical medicine ,Interquartile range ,Endometrial Polyp ,Humans ,Medicine ,Radiology, Nuclear Medicine and imaging ,Prospective Studies ,030212 general & internal medicine ,Early Detection of Cancer ,Aged ,Ultrasonography ,Observer Variation ,Uterine Diseases ,030219 obstetrics & reproductive medicine ,Hysterectomy ,Radiological and Ultrasound Technology ,medicine.diagnostic_test ,business.industry ,Endometrial cancer ,Reproducibility of Results ,Obstetrics and Gynecology ,Hormone replacement therapy (menopause) ,Pattern recognition ,General Medicine ,Middle Aged ,medicine.disease ,Endometrial Neoplasms ,Endometrial hyperplasia ,Postmenopause ,Cross-Sectional Studies ,Reproductive Medicine ,Hysteroscopy ,Endometrial Hyperplasia ,Female ,Uterine Hemorrhage ,Artificial intelligence ,business ,Endometrial biopsy - Abstract
Objectives To assess the inter-rater agreement and reliability of using subjective pattern recognition for diagnosing endometrial cancer (EC) on ultrasound in women with postmenopausal bleeding (PMB). Methods This was a prospective cross-sectional study conducted at a gynecological rapid-access clinic, between October 2016 and December 2017, in which consecutive women with PMB and endometrial thickness of ≥ 4.5 mm on transvaginal ultrasound examination were included. Women on hormone replacement therapy or tamoxifen and those with a history of primary gynecological malignancy were excluded. Two raters independently performed ultrasound examinations, blinded to each other's findings, and classified women as having uniformly thickened endometrium, benign endometrial polyp or EC, using subjective pattern recognition. Inter-rater reliability of ultrasound diagnosis was assessed using Cohen's kappa (κ) statistic. All women subsequently underwent either outpatient endometrial biopsy, hysteroscopy or hysterectomy. Results Forty women were included in the study, with a median age of 61 (interquartile range (IQR), 57-69) years and a median endometrial thickness of 11.0 (IQR, 6.2-20.3) mm. Final histological analysis confirmed 16 (40%) women with EC, 16 (40%) with benign endometrial polyp, four (10%) with atrophic endometrium, three (8%) with proliferative endometrium and one (3%) with endometrial hyperplasia. Inter-rater agreement for the ultrasound diagnoses of uniformly thickened endometrium, benign endometrial polyp and EC was 14/16 (87.5%), 22/30 (73.3%) and 28/34 (82.4%), respectively; inter-rater reliability was good (κ = 0.69; 95% CI, 0.49-0.88). When the ultrasound diagnoses were grouped as either cancer or no cancer, inter-rater agreement was 85% and inter-rater reliability was good (κ = 0.78; 95% CI, 0.61-0.95). Rater A correctly identified 14/16 cases of EC and Rater B identified 15/16. EC was misdiagnosed as benign polyps on ultrasound in two women by Rater A and in one woman by Rater B. The overall accuracies of Rater A and Rater B in differentiating between benign endometrial pathologies and malignancy were 90% and 90%, respectively. Conclusions Our results show good inter-rater reliability of subjective pattern recognition in diagnosing uniformly thickened endometrium, benign endometrial polyp and EC on ultrasound in women with PMB. Our findings should facilitate wider use of subjective pattern recognition in routine clinical practice. © 2020 International Society of Ultrasound in Obstetrics and Gynecology.
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- 2021
46. Hepatitis C Virus Transmission Clusters in Public Health and Correctional Settings, Wisconsin, USA, 2016–20171
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Audrey F. Prieve, Ryan P. Westergaard, Ruth Koepke, Damien C. Tully, Karen A. Power, Karli R Hochstatter, Thomas Whyte, Todd M. Allen, David J. Bean, David W. Seal, and Wajiha Z. Akhtar
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Microbiology (medical) ,medicine.medical_specialty ,Epidemiology ,Hepatitis C virus ,030231 tropical medicine ,Hepacivirus ,medicine.disease_cause ,molecular epidemiology ,Drug Users ,03 medical and health sciences ,Wisconsin ,0302 clinical medicine ,injection drug use ,Environmental health ,medicine ,Humans ,viruses ,hepatitis ,030212 general & internal medicine ,Substance Abuse, Intravenous ,Hepatitis C Virus Transmission Clusters in Public Health and Correctional Settings, Wisconsin, USA, 2016–2017 ,Phylogeny ,Retrospective Studies ,Hepatitis ,Wisconsin usa ,Molecular epidemiology ,business.industry ,Transmission (medicine) ,Research ,Public health ,global hepatitis outbreak surveillance technology ,Outbreak ,medicine.disease ,Hepatitis C ,United States ,phylogenetics ,Infectious Diseases ,Prisons ,transmission clusters ,Female ,Public Health ,business - Abstract
Ending the hepatitis C virus (HCV) epidemic requires stopping transmission among networks of persons who inject drugs. Identifying transmission networks by using genomic epidemiology may inform community responses that can quickly interrupt transmission. We retrospectively identified HCV RNA-positive specimens corresponding to 459 persons in settings that use the state laboratory, including correctional facilities and syringe services programs, in Wisconsin, USA, during 2016-2017. We conducted next-generation sequencing of HCV and analyzed it for phylogenetic linkage by using the Centers for Disease Control and Prevention Global Hepatitis Outbreak Surveillance Technology platform. Analysis showed that 126 persons were linked across 42 clusters. Phylogenetic clustering was higher in rural communities and associated with female sex and younger age among rural residents. These data highlight that HCV transmission could be reduced by expanding molecular-based surveillance strategies to rural communities affected by the opioid crisis.
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- 2021
47. Evaluation of pelvic washing specimens in patients with endometrial cancer: Cytomorphological features, diagnostic agreement, and pathologist experience
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Laura J. Havrilesky, Gloria Broadwater, Claudia Jones, Richard C. Davis, Sarah M. Bean, and Wen-Chi Foo
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Cancer Research ,medicine.medical_specialty ,Cytodiagnosis ,030209 endocrinology & metabolism ,Surgical pathology ,03 medical and health sciences ,0302 clinical medicine ,Chart ,Cytology ,Humans ,Medicine ,In patient ,Medical diagnosis ,business.industry ,Endometrial cancer ,Reproducibility of Results ,Middle Aged ,medicine.disease ,Endometrial Neoplasms ,Pathologists ,Serous fluid ,Oncology ,030220 oncology & carcinogenesis ,Female ,Radiology ,business ,Indeterminate - Abstract
BACKGROUND Pelvic washings for patients with endometrial cancer is recommended but not used for staging. The International System for Reporting Serous Fluid Cytology (TIS) has standardized diagnostic categories, but the criteria remain incomplete. The 3 primary goals of this study were to 1) investigate features that distinguish atypical/indeterminate from malignant specimens, 2) measure the level of agreement between chart and reviewer diagnoses, and 3) determine whether the number of years in practice had an effect on the diagnoses rendered. METHODS Pelvic washings and surgical pathology specimens for 52 patients with a chart diagnosis of atypical/indeterminate, suspicious, or malignant cytology and 52 age-matched controls with a negative chart diagnosis were included, reviewed blindly by 2 cytopathologists, and assigned a study diagnosis. Morphologic features were assessed. Agreement between original chart diagnoses and reviewer diagnoses were assessed as well as effect of years in practice. RESULTS The overall cellularity in cell block (CB) slides for the malignant category was significantly increased compared with the atypical/indeterminate category (P < .0001). In addition, the number of atypical groups in ThinPrep for malignant washings was significantly increased compared with the atypical category (P < .001) and the negative and suspicious categories (P < .0001) in the CB. Overall agreement between the original and adjudicated diagnoses was high (γ = 0.983). There was no significant difference between diagnoses rendered and years in practice. CONCLUSION The overall cellularity and number of atypical cells can be used to distinguish between malignant and atypical pelvic washing specimens. There is high reproducibility in the diagnostic categories and high agreement among pathologists, regardless of practice experience. These findings can help refine the criteria for TIS.
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- 2021
48. Temporal distribution modelling reveals upstream habitat drying and downstream non‐native introgression are squeezing out an imperiled headwater fish
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Matthew R. Acre, Joshuah S. Perkin, Dijar J. Lutz-Carrillo, Stephanie D. Parker, and Megan G. Bean
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Headwater catfish ,biology ,business.industry ,Ecology ,Distribution (economics) ,Introgression ,biology.organism_classification ,Habitat destruction ,Geography ,Habitat ,Downstream (manufacturing) ,%22">Fish ,Upstream (networking) ,business ,Ecology, Evolution, Behavior and Systematics - Published
- 2021
49. Effect of Context-Dependent Modulation of Trunk Muscle Activity on Manual Wheelchair Propulsion
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Ronald J. Triolo, Kevin M. Foglyano, Stephanie Nogan Bailey, and Nicholas F. Bean
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Male ,business.industry ,Rehabilitation ,Torso ,Wearable computer ,Physical Therapy, Sports Therapy and Rehabilitation ,Context (language use) ,Propulsion ,Accelerometer ,Trunk ,Biomechanical Phenomena ,Wearable Electronic Devices ,Acceleration ,Wheelchairs ,Sprint ,Accelerometry ,Modulation (music) ,Humans ,Medicine ,Disabled Persons ,Female ,Muscle, Skeletal ,business ,Simulation - Abstract
OBJECTIVE The aims of the study were to reliably determine the two main phases of manual wheelchair propulsion via a simple wearable sensor and to evaluate the effects of modulated trunk and hip stimulation on manual wheelchair propulsion during the challenging tasks of ramp assent and level sprint. DESIGN An offline tool was created to identify common features between wrist acceleration signals for all subjects who corresponded to the transitions between the contact and recovery phases of manual wheelchair propulsion. For one individual, the acceleration rules and thresholds were implemented for real-time phase-change event detection and modulation of stimulation. RESULTS When pushing with phase-dependent modulated stimulation, there was a significant (P < 0.05) increase in the primary speed variable (5%-6%) and the subject rated pushing as "moderately or very easy." In the offline analysis, the average phase-change event detection success rate was 79% at the end of contact and 71% at the end of recovery across the group. CONCLUSIONS Signals from simple, wrist-mounted accelerometers can detect the phase transitions during manual wheelchair propulsion instead of elaborate and expensive, instrumented systems. Appropriately timing changes in muscle activation with the propulsion cycle can result in a significant increase in speed, and the system was consistently perceived to be significantly easier to use.
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- 2021
50. Evaluation and improvement of the National Early Warning Score (NEWS2) for COVID-19: a multi-hospital study
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Huayu Zhang, James Batchelor, Matt Rogers, Ashwin Pinto, Mahdad Noursadeghi, Kristin Wickstrom, Alvaro Köhn-Luque, Rishi K Gupta, Ewan Carr, Lukasz Roguski, Jiaxing Sun, Xin Zhang, Luke T. Slater, Matt Stammers, Florina Borca, James T. Teo, Cormac Breen, Bruce Guthrie, Andrew Pickles, Victor Roth Cardoso, Vasa Curcin, Richard Dobson, Wenjuan Wang, Kevin O'Gallagher, Simon Ball, Zeljko Kraljevic, Chris McWilliams, Mike Wyatt, Erik K. Amundsen, Georgios V. Gkoutos, Honghan Wu, Xiaodong Wu, Ting Shi, Anthony J Shinton, Daniel Stahl, Andreas Karwath, Rebecca Bendayan, Christopher P Bourdeaux, Abdel Douiri, Ajay M. Shah, Hang T.T. Phan, Walter Muruet, Aleksander Rygh Holten, Amos Folarin, Daniel Bean, Anthony Shek, Thomas Searle, and Rosita Zakeri
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Male ,medicine.medical_specialty ,NEWS2 score ,lcsh:Medicine ,Disease ,State Medicine ,law.invention ,Cohort Studies ,03 medical and health sciences ,0302 clinical medicine ,law ,Prediction model ,Diabetes mellitus ,Electronic Health Records ,Humans ,Medicine ,030212 general & internal medicine ,Pandemics ,Aged ,Receiver operating characteristic ,SARS-CoV-2 ,business.industry ,lcsh:R ,COVID-19 ,030208 emergency & critical care medicine ,General Medicine ,Middle Aged ,Prognosis ,Early warning score ,medicine.disease ,Intensive care unit ,United Kingdom ,Confidence interval ,3. Good health ,prediction model ,Early Warning Score ,Emergency medicine ,Blood parameters ,Absolute neutrophil count ,Female ,business ,Research Article ,Cohort study - Abstract
Background The National Early Warning Score (NEWS2) is currently recommended in the UK for the risk stratification of COVID-19 patients, but little is known about its ability to detect severe cases. We aimed to evaluate NEWS2 for the prediction of severe COVID-19 outcome and identify and validate a set of blood and physiological parameters routinely collected at hospital admission to improve upon the use of NEWS2 alone for medium-term risk stratification. Methods Training cohorts comprised 1276 patients admitted to King’s College Hospital National Health Service (NHS) Foundation Trust with COVID-19 disease from 1 March to 30 April 2020. External validation cohorts included 6237 patients from five UK NHS Trusts (Guy’s and St Thomas’ Hospitals, University Hospitals Southampton, University Hospitals Bristol and Weston NHS Foundation Trust, University College London Hospitals, University Hospitals Birmingham), one hospital in Norway (Oslo University Hospital), and two hospitals in Wuhan, China (Wuhan Sixth Hospital and Taikang Tongji Hospital). The outcome was severe COVID-19 disease (transfer to intensive care unit (ICU) or death) at 14 days after hospital admission. Age, physiological measures, blood biomarkers, sex, ethnicity, and comorbidities (hypertension, diabetes, cardiovascular, respiratory and kidney diseases) measured at hospital admission were considered in the models. Results A baseline model of ‘NEWS2 + age’ had poor-to-moderate discrimination for severe COVID-19 infection at 14 days (area under receiver operating characteristic curve (AUC) in training cohort = 0.700, 95% confidence interval (CI) 0.680, 0.722; Brier score = 0.192, 95% CI 0.186, 0.197). A supplemented model adding eight routinely collected blood and physiological parameters (supplemental oxygen flow rate, urea, age, oxygen saturation, C-reactive protein, estimated glomerular filtration rate, neutrophil count, neutrophil/lymphocyte ratio) improved discrimination (AUC = 0.735; 95% CI 0.715, 0.757), and these improvements were replicated across seven UK and non-UK sites. However, there was evidence of miscalibration with the model tending to underestimate risks in most sites. Conclusions NEWS2 score had poor-to-moderate discrimination for medium-term COVID-19 outcome which raises questions about its use as a screening tool at hospital admission. Risk stratification was improved by including readily available blood and physiological parameters measured at hospital admission, but there was evidence of miscalibration in external sites. This highlights the need for a better understanding of the use of early warning scores for COVID.
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- 2021
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