20 results on '"Siqun Zheng"'
Search Results
2. PD52-04 RARE GERMLINE PATHOGENIC MUTATIONS OF DNA REPAIR GENES ARE MOST STRONGLY ASSOCIATED WITH GRADE GROUP 5 PROSTATE CANCER
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Marta Gielzak, Patrick C. Walsh, Kathleen E. Wiley, Shuwei Li, Brice A. J. Sarver, Hongjie Yu, Tamara L. Lotan, Rong Na, Mary Helen Black, Brian T. Helfand, Yishuo Wu, William B. Isaacs, Siqun Zheng, Kathleen A. Cooney, Jianfeng Xu, and Holly LaDuca
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Prostate cancer ,business.industry ,DNA repair ,Urology ,Cancer research ,Medicine ,business ,medicine.disease ,Germline - Published
- 2020
3. PD38-06 WHICH GERMLINE GENES SHOULD BE TESTED FOR ASSESSING PROSTATE CANCER RISK? RESULTS FROM A LARGE POPULATION OF UNSELECTED CASES AND CONTROLS FROM UK BIOBANK
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Jianfeng Xu, Richard J Fantus, Brian T. Helfand, Kathleen A. Cooney, Siqun Zheng, Yishuo Wu, Zhuqing Shi, William B. Isaacs, and Jun Wei
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Oncology ,Prostate cancer risk ,medicine.medical_specialty ,business.industry ,Urology ,Internal medicine ,Large population ,medicine ,business ,Biobank ,Gene ,Germline - Published
- 2020
4. MP08-09 GERMLINE MUTATIONS IN CANDIDATE GENES AND KIDNEY CANCER RISK: RESULTS FROM A LARGE POPULATION OF UNSELECTED CASES AND CONTROLS FROM UK BIOBANK
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Kristian Novakovic, Jianfeng Xu, Zhuqing Shi, Sangtae Park, Richard J Fantus, Siqun Zheng, Jun Wei, Haifei Jia, and Brian T. Helfand
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Genetics ,Candidate gene ,urogenital system ,business.industry ,Urology ,Large population ,food and beverages ,Susceptibility gene ,medicine.disease ,Biobank ,Germline mutation ,medicine ,business ,Kidney cancer - Abstract
INTRODUCTION AND OBJECTIVE:About 38% of kidney cancer risk can be attributed to inherited factors. Several candidate kidney cancer susceptibility genes have been proposed. However, statistical evid...
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- 2020
5. Performance of the Prostate Health Index in predicting prostate biopsy outcomes among men with a negative digital rectal examination and transrectal ultrasonography
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Jie Lin Sun, De Ke Jiang, Liqun Huang, Jianfeng Xu, Shan Cheng Ren, Jun Qi, Guo Peng Yu, Ying Hao Sun, Yi Shuo Wu, Dingwei Ye, Qiang Ding, Hai Tao Chen, Yao Zhu, Fang Liu, Rong Na, Gui Ming Zhang, Hao Wen Jiang, and Siqun Zheng
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Adult ,Male ,medicine.medical_specialty ,Prostate biopsy ,Biopsy ,Urology ,030232 urology & nephrology ,urologic and male genital diseases ,lcsh:RC870-923 ,03 medical and health sciences ,Prostate cancer ,0302 clinical medicine ,Predictive Value of Tests ,Prostate ,medicine ,prostate-specific antigen ,Humans ,Prospective cohort study ,Prostate Health Index ,Aged ,Digital Rectal Examination ,Ultrasonography ,Aged, 80 and over ,Gynecology ,[-2]proPSA ,medicine.diagnostic_test ,business.industry ,prostate cancer ,receiver operating curve ,Prostatic Neoplasms ,General Medicine ,Rectal examination ,Middle Aged ,medicine.disease ,lcsh:Diseases of the genitourinary system. Urology ,Prostate-specific antigen ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Transrectal ultrasonography ,Original Article ,business - Abstract
The [-2]proPSA (p2PSA) and its derivatives, the p2PSA-to-free PSA ratio (%p2PSA), and the Prostate Health Index (PHI) have greatly improved discrimination between men with and without prostate cancer (PCa) in prostate biopsies. However, little is known about their performance in cases where a digital rectal examination (DRE) and transrectal ultrasonography (TRUS) are negative. A prospective cohort of 261 consecutive patients in China with negative DRE and TRUS were recruited and underwent prostate biopsies. A serum sample had collected before the biopsy was used to measure various PSA derivatives, including total prostate-specific antigen (tPSA), free PSA, and p2PSA. For each patient, the free-to-total PSA ratio (%fPSA), PSA density (PSAD), p2PSA-to-free PSA ratio (%p2PSA), and PHI were calculated. Discriminative performance was assessed using the area under the receiver operating characteristic curve (AUC) and the biopsy rate at 91% sensitivity. The AUC scores within the entire cohort with respect to age, tPSA, %fPSA, PSAD, p2PSA, %p2PSA, and PHI were 0.598, 0.751, 0.646, 0.789, 0.814, 0.808, and 0.853, respectively. PHI was the best predictor of prostate biopsy results, especially in patients with a tPSA of 10.1-20 ng ml −1 . Compared with other markers, at a sensitivity of 91%, PHI was the most useful for determining which men did not need to undergo biopsy, thereby avoiding unnecessary procedures. The use of PHI could improve the accuracy of PCa detection by predicting prostate biopsy outcomes among men with a negative DRE and TRUS in China.
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- 2016
6. Mo1615 POTENTIAL CLINICAL UTILITY OF SNP-BASED POLYGENIC RISK SCORE FOR DEVELOPING PERSONALIZED COLONOSCOPY SCREENING STRATEGY
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Siqun Zheng, Mohammad Beig, Vanderloo Adam, Ayush N. Shah, Zhuqing Shi, Obaid Ansari, Polina Imas, Omar Khan, Jianfeng Xu, Michael J. Northcutt, Jay L. Goldstein, and Michael K. Zijlstra
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Oncology ,medicine.medical_specialty ,Hepatology ,medicine.diagnostic_test ,business.industry ,Internal medicine ,Gastroenterology ,medicine ,SNP ,Colonoscopy ,Polygenic risk score ,business - Published
- 2020
7. Genetic variants in 5p13.2 and 7q21.1 are associated with treatment for benign prostatic hyperplasia with the α-adrenergic receptor antagonist
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Yongjiang Yu, Danfeng Xu, Ding Xu, Jianfeng Xu, Jun Qi, Jian Kang, Xiaoqiang Qian, Siqun Zheng, Xujun Sheng, Hailong Liu, and Xiaoling Lin
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Male ,medicine.medical_specialty ,medicine.drug_class ,030232 urology & nephrology ,Urology ,Prostatic Hyperplasia ,030209 endocrinology & metabolism ,Single-nucleotide polymorphism ,urologic and male genital diseases ,Polymorphism, Single Nucleotide ,Efficacy ,03 medical and health sciences ,0302 clinical medicine ,5-alpha Reductase Inhibitors ,Prostate ,SNP ,Medicine ,Humans ,Adrenergic alpha-Antagonists ,Aged ,urogenital system ,business.industry ,Hyperplasia ,Middle Aged ,Receptor antagonist ,medicine.disease ,medicine.anatomical_structure ,Case-Control Studies ,Etiology ,Disease Progression ,International Prostate Symptom Score ,Geriatrics and Gerontology ,business - Abstract
The etiology of benign prostatic hyperplasia (BPH) has not been well established. The preferred medical treatment for many men with symptomatic benign prostatic hyperplasia is either an α-adrenergic receptor antagonist (α-blocker), or a 5α-reductase inhibitor. Single nucleotide polymorphism (SNP) is a powerful tool for successful implementation of individualized treatment.Eighteen SNPs associated with drug efficacy in a Chinese population were genotyped in 790 BPH cases (330 aggressive and 460 non-aggressive BPH cases) and 1008 controls. All BPH patients were treated with α-adrenergic blockers for at least 9 months. We tested the associations between tagging single nucleotide polymorphism and BPH risk/aggressiveness, clinical characteristics at baseline, including the International Prostate Symptom Score (IPSS) and total prostate volume, and changes in clinical characteristics after treatment.There were nine SNPs associated with BPH risk, clinical progression and therapeutic effect. (1) There were nine tSNPs been chosen in CYP3A4, CYP3A5 and RANBP3L genes. (2) The SNP, rs16902947 in RANBP3L at 5p13.2 (p = .01), was significantly associated with BPH. (3) We found two SNPs, rs16902947 in RANBP3L at 5p13.2 (p = .0388) and rs4646437 in CYP3A4 at 7q21.1 (p = .0325), associated with drug effect. (4) Allele "G" for rs16902947 was found to be risk alleles for BPH risk (OR= 2.357, 95%CI 1.01-1.48). The "A" allele of rs4646437 was associated with lower IPSS at baseline (β= -0.4232, p= .03255).rs16902947, rs16902947 and rs4646437 single nucleotide polymorphisms are significantly associated with the clinical characteristics of benign prostatic hyperplasia and the efficacy of benign prostatic hyperplasia treatment.
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- 2017
8. SRD5A1 and SRD5A2 are Associated with Treatment for Benign Prostatic Hyperplasia with the Combination of 5α-Reductase Inhibitors and α-Adrenergic Receptor Antagonists
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Li Wang, Jian Kang, Jielin Sun, Lu Tian, Rong Na, Xin Gu, Zhuo Chen, Tao Huang, Jun Qi, Sha Tao, Jianfeng Xu, Siqun Zheng, and Yang Jiao
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Male ,China ,medicine.medical_specialty ,Genotype ,Urology ,Prostatic Hyperplasia ,Single-nucleotide polymorphism ,Polymorphism, Single Nucleotide ,5 Alpha-Reductase Inhibitor ,5-alpha Reductase Inhibitors ,3-Oxo-5-alpha-Steroid 4-Dehydrogenase ,Prostate ,Internal medicine ,medicine ,Humans ,Receptor ,Adrenergic alpha-Antagonists ,business.industry ,Membrane Proteins ,Organ Size ,Middle Aged ,Hyperplasia ,medicine.disease ,Prostate-specific antigen ,Phenotype ,Endocrinology ,medicine.anatomical_structure ,SRD5A2 ,Disease Progression ,Quality of Life ,Cancer research ,International Prostate Symptom Score ,business - Abstract
Common treatments for benign prostatic hyperplasia include 5α-reductase inhibitors and α-adrenergic receptor antagonists. However, these treatments can only partially decrease the risk of benign prostatic hyperplasia progression. SRD5A1 and SRD5A2 are 5α-reductase inhibitor targets. We investigated the association between drug efficacy and single nucleotide polymorphisms in the SRD5A1 and SRD5A2 genes in a Chinese population.We genotyped 11 tagging single nucleotide polymorphisms in the SRD5A1 and SRD5A2 genes in a total of 426 benign prostatic hyperplasia cases and 1,008 controls from Xinhua Hospital, Shanghai, People's Republic of China. Cases were treated with type II 5α-reductase inhibitors and α-adrenergic receptor antagonists. We tested the association of tagging single nucleotide polymorphisms with benign prostatic hyperplasia risk/progression, clinical characteristics at baseline, including the I-PSS (International Prostate Symptom Score) and total prostate volume, and changes in clinical characteristics after treatment.The 11 tagging single nucleotide polymorphisms were not significantly associated with benign prostatic hyperplasia risk or progression (each p0.05). In the SRD5A1 gene rs6884552 and rs3797177 were significantly associated with baseline I-PSS (p = 0.04 and 0.003, respectively). In the SRD5A2 gene rs523349 (V89L) and rs9332975 were significantly associated with baseline total prostate volume (p = 0.01 and 0.001, respectively). In SRD5A1 rs166050 was significantly associated with the posttreatment change in total prostate volume (p = 0.04). In SRD5A2 rs523349 and rs612224 were significantly associated with the posttreatment I-PSS change (p = 0.03 and 0.009, respectively).SRD5A1 and SRD5A2 single nucleotide polymorphisms are significantly associated with the clinical characteristics of benign prostatic hyperplasia and the efficacy of benign prostatic hyperplasia treatment.
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- 2013
9. Genetic Variants in 2q31 and 5p15 Are Associated With Aggressive Benign Prostatic Hyperplasia in a Chinese Population
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Xin Gu, Jun Qi, Jian Kang, Li Wang, Siqun Zheng, Jianfeng Xu, Lu Tian, Rong Na, Jielin Sun, Zhuo Chen, Sha Tao, and Yang Jiao
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Oncology ,Gynecology ,Chinese population ,medicine.medical_specialty ,urogenital system ,business.industry ,Urology ,Single-nucleotide polymorphism ,Hyperplasia ,urologic and male genital diseases ,medicine.disease ,Logistic regression ,Prostate cancer ,medicine.anatomical_structure ,Prostate ,Internal medicine ,medicine ,International Prostate Symptom Score ,business ,Pathological - Abstract
BACKGROUND Benign prostatic hyperplasia (BPH) is a common disease prevalent in elderly men. However, the genetic determinants of BPH remain unclear. Because BPH and prostate cancer (PCa) share some common pathological characteristics, we investigated whether susceptibility loci for PCa contributed to BPH risk and BPH aggressiveness in Chinese men. METHODS Fourteen SNPs associated with PCa risk in a Chinese population were genotyped in 426 BPH cases (184 aggressive and 242 non-aggressive BPH cases) and 1,008 controls. The association between the SNPs and BPH risk/aggressiveness was estimated using logistic regression analysis. In addition, effects of the 14 SNPs on BPH related clinical traits, including International Prostate Symptom Score (IPSS), prostate volume, total PSA, and free PSA were evaluated using linear regression analysis. RESULTS Two SNPs, rs12621278 in ITGA6 at 2q31 (OR = 0.82, P = 0.05) and rs339331 in RFX6 at 6q22 (OR = 1.22, P = 0.04) were significantly associated with BPH. In addition, rs12621278 (OR = 0.73, P = 0.05) and rs12653946, 13 kb upstream of IRX4 at 5p15 (OR = 1.40, 0.03), were significantly associated with aggressive BPH. Moreover, the risk allele of rs12621278 (G) and rs12653946 (T) for aggressive BPH were significantly associated with elevated IPSS after treatment (P = 0.01). CONCLUSIONS This is the first systematic investigation on the contributions of PCa susceptibility loci to risk and aggressiveness of BPH. Our findings advance our understanding of the genetic basis of BPH, especially aggressive BPH. In addition, our results provide new insights into the genetic determinants shared between BPH and PCa. Prostate 73: 1182–1190, 2013. © 2013 Wiley Periodicals, Inc.
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- 2013
10. Association of Prostate Cancer Risk Variants with Clinicopathologic Characteristics of the Disease
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Jielin Sun, Yi Zhu, Henrik Grönberg, Kathleen E. Wiley, Baoli Chang, Ge Li, William B. Isaacs, Alan W. Partin, Bruce J. Trock, Siqun Zheng, Patrick C. Walsh, Tamara S. Adams, Jianfeng Xu, Fredrik Wiklund, Wennuan Liu, Aubrey R. Turner, Sarah D. Isaacs, and Fang-Chi Hsu
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Male ,Oncology ,Cancer Research ,medicine.medical_specialty ,Pathology ,Genotype ,medicine.medical_treatment ,Population ,Single-nucleotide polymorphism ,Polymorphism, Single Nucleotide ,Article ,Prostate cancer ,Gene Frequency ,Risk Factors ,Internal medicine ,Biomarkers, Tumor ,Humans ,Medicine ,education ,Allele frequency ,Aged ,education.field_of_study ,business.industry ,Prostatectomy ,Prostatic Neoplasms ,Cancer ,Middle Aged ,Prostate-Specific Antigen ,medicine.disease ,Prostate-specific antigen ,business - Abstract
Purpose: Fifteen independent genetic variants have been implicated in prostate cancer risk by recent genome-wide association studies. However, their association with clinicopathologic features of prostate cancer is uncertain. Experimental Design: We systematically evaluated these 15 variants in 1,563 prostate cancer patients undergoing radical prostatectomy, taking advantage of the uniform tumor stage and grade information available for each of these cases. Associations of these variants with aggressiveness, pathologic Gleason scores, pathologic stage, age at diagnosis, or serum prostate-specific antigen (PSA) levels were tested. Results: After adjusting for multiple testing, none of the single nucleotide polymorphisms was individually or cumulatively associated with aggressiveness or individual clinicopathologic variables of prostate cancer such as Gleason scores, pathologic stage, or age at diagnosis of prostate cancer. The reported risk allele (G) for single nucleotide polymorphism rs2735839 in the KLK3 gene at 19q13 was more frequent in less aggressive prostate cancer patients (0.89) than in more aggressive prostate cancer patients (0.86; nominal P = 0.03) or in controls (0.86; nominal P = 0.04). Considering that this allele was also significantly associated with higher serum PSA levels among controls (nominal P = 0.003), the observed trend of higher frequency of this risk allele between less and more aggressive prostate cancer, or between less aggressive and controls may be due to detection bias of PSA screening. Conclusions: Prostate cancer risk variants recently discovered from genome-wide case-control association studies are not associated with clinicopathologic variables in this population. Case-case studies are urgently needed to discover genetic variants that predict tumor aggressiveness.
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- 2008
11. Genetic variation in the COX-2 gene and the association with prostate cancer risk
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Henrik Grönberg, Baoli Chang, Jan Adolfsson, H. O. Adami, Sara Lindström, K. Shahedi, Jianfeng Xu, Siqun Zheng, Fredrik Wiklund, Wennuan Liu, Jishan Sun, and Katarina Augustsson-Bälter
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Male ,Oncology ,Cancer Research ,medicine.medical_specialty ,Genotype ,Population ,Single-nucleotide polymorphism ,Polymorphism, Single Nucleotide ,Linkage Disequilibrium ,Prostate cancer ,Gene Frequency ,Risk Factors ,Internal medicine ,Odds Ratio ,medicine ,Humans ,education ,Allele frequency ,Aged ,Sweden ,Genetics ,education.field_of_study ,business.industry ,Incidence ,Haplotype ,Case-control study ,Genetic Variation ,Membrane Proteins ,Prostatic Neoplasms ,medicine.disease ,Minor allele frequency ,Haplotypes ,Cyclooxygenase 2 ,Case-Control Studies ,Population study ,business - Abstract
COX-2 is a key enzyme in the conversion of arachidonic acid to prostaglandins. The prostaglandins produced by COX-2 are involved in inflammation and pain response in different tissues in the body. Accumulating evidence from epidemiologic studies, chemical carcinogen-induced rodent models and clinical trials indicate that COX-2 plays a role in human carcinogenesis and is overexpressed in prostate cancer tissue. We examined whether sequence variants in the COX-2 gene are associated with prostate cancer risk. We analyzed a large population-based case–control study, cancer prostate in Sweden (CAPS) consisting of 1,378 cases and 782 controls. We evaluated 16 single nucleotide polymorphisms (SNPs) spanning the entire COX-2 gene in 94 subjects of the control group. Five SNPs had a minor allele frequency of more than 5% in our study population and these were genotyped in all case patients and control subjects and gene-specific haplotypes were constructed. A statistically significant difference in allele frequency between cases and controls was observed for 2 of the SNPs (+3100 T/G and +8365 C/T), with an odds ratio of 0.78 (95% CI = 0.64–0.96) and 0.65 (95% CI = 0.45–0.94) respectively. In the haplotype analysis, 1 haplotype carrying the variant allele from both +3100 T/G and +8365 C/T, with a population frequency of 3%, was also significantly associated with decreased risk of prostate cancer (p = 0.036, global simulated p-value = 0.046). This study supports the hypothesis that inflammation is involved in prostate carcinogenesis and that sequence variation within the COX-2 gene influence the risk of prostate cancer. © 2006 Wiley-Liss, Inc.
- Published
- 2006
12. Interleukin-1 receptor antagonist haplotype associated with prostate cancer risk
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J.-E. Johansson, Maria Hedelin, Jianfeng Xu, Jishan Sun, Fredrik Lindmark, H. O. Adami, Fredrik Wiklund, Deborah A. Meyers, J Clark, W. Isaacs, Henrik Grönberg, Katarina Bälter, Siqun Zheng, and Baoli Chang
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musculoskeletal diseases ,Male ,Cancer Research ,Genotype ,medicine.medical_treatment ,Sialoglycoproteins ,Inflammation ,Polymorphism, Single Nucleotide ,Proinflammatory cytokine ,Prostate cancer ,Risk Factors ,medicine ,Odds Ratio ,Humans ,Receptor ,Aged ,Sweden ,business.industry ,Antagonist ,association ,Interleukin ,Genetic Variation ,Prostatic Neoplasms ,Genetics and Genomics ,IL1-RN ,medicine.disease ,prostate cancer ,Interleukin 1 Receptor Antagonist Protein ,Interleukin 1 receptor antagonist ,Cytokine ,Oncology ,Haplotypes ,Case-Control Studies ,Immunology ,medicine.symptom ,business ,SNPs - Abstract
IL1-RN is an important anti-inflammatory cytokine that modulate the inflammation response by binding to IL1 receptors, and as a consequence inhibits the action of proinflammatory cytokines IL1alpha and IL1beta. In this study, we hypothesise that sequence variants in the IL1-RN gene are associated with prostate cancer risk. The study population, a population-based case-control study in Sweden, consisted of 1383 prostate cancer case patients and 779 control subjects. We first selected 18 sequence variants covering the IL1-RN gene and genotyped these single-nucleotide polymorphisms (SNPs) in 96 control subjects. Gene-specific haplotypes of IL1-RN were constructed and four haplotype-tagging single-nucleotide polymorphisms (htSNPs) were identified (rs878972, rs315934, rs3087263 and rs315951) that could uniquely describe95% of the haplotypes. All study subjects were genotyped for the four htSNPs. No significant difference in genotype frequencies between cases and controls were observed for any of the four SNPs based on a multiplicative genetic model. Overall there was no significant difference in haplotype frequencies between cases and controls; however, the prevalence of the most common haplotype (ATGC) was significantly higher among cases (38.7%) compared to controls (33.5%) (haplotype-specific P = 0.009). Evaluation of the prostate cancer risk associated with carrying the 'ATGC' haplotype revealed that homozygous carriers were at significantly increased risk (odds ratio (OR) = 1.6, 95% confidence interval (CI) = 1.2-2.2), compared to noncarriers, while no significant association was found among subjects heterozygous for the haplotype (OR = 1.0, 95% CI = 0.8-1.2). Restricting analyses to advanced prostate cancer strengthened the association between the 'ATGC' haplotype and disease risk (OR for homozygous carriers vs noncarriers 1.8, 95% CI = 1.3-2.5). In conclusion, the results from this study support the hypothesis that inflammation has a role of in the development of prostate cancer, but further studies are needed to identify the causal variants in this region and to elucidate the biological mechanism for this association.
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- 2005
13. Hereditary prostate cancer in African American families: linkage analysis using markers that map to five candidate susceptibility loci
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Jianfeng Xu, Ethan M. Lange, Kathleen A. Cooney, Hong Chen, Kathy E. Wiley, Sarah D. Isaacs, W. M Brown, Patrick C. Walsh, William B. Isaacs, Baoli Chang, and Siqun Zheng
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Genetic Markers ,Male ,Cancer Research ,Genotype ,Genetic Linkage ,Chromosomes, Human, Pair 20 ,Polymerase Chain Reaction ,03 medical and health sciences ,Prostate cancer ,0302 clinical medicine ,Gene mapping ,Genetic linkage ,Humans ,Medicine ,Genetic Predisposition to Disease ,linkage analysis ,Allele ,Aged ,hereditary cancer syndromes ,030304 developmental biology ,Linkage (software) ,Genetics ,Chromosomes, Human, X ,0303 health sciences ,business.industry ,Prostatic Neoplasms ,Genetics and Genomics ,Middle Aged ,prostate cancer ,medicine.disease ,Pedigree ,3. Good health ,Black or African American ,Oncology ,Chromosomes, Human, Pair 1 ,Genetic marker ,030220 oncology & carcinogenesis ,Chromosome 20 ,business ,Software - Abstract
African American men have the highest incidence of prostate cancer in the world. Despite this statistic, linkage studies designed to localise prostate cancer susceptibility alleles have included primarily men of Caucasian descent. In this report, we performed a linkage analysis using 33 African American prostate cancer families from two independent research groups. In total, 126 individuals (including 89 men with prostate cancer) were genotyped using markers that map to five prostate cancer susceptibility loci, namely HPC1 at 1q24-25, PCAP at 1q42.2-43, CAPB at 1p36, HPC20 on chromosome 20, and HPCX at Xq27-28. Multipoint mode-of-inheritance-free linkage analyses were performed using the GENEHUNTER software. Some evidence of prostate cancer was detected to HPC1 using all families with a maximum NPL Z score of 1.12 near marker D1S413 (P=0.13). Increased evidence of linkage was observed in the 24 families with prostate cancer diagnosis prior to age 65 years and in the 20 families with male-to-male transmission. Some evidence of prostate cancer linkage was also detected at markers mapping to PCAP, HPC20, and HPCX. Continued collection and analysis of African American prostate cancer families will lead to an improved understanding of inherited susceptibility in this high-risk group.
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- 2004
14. Genome-Wide Association Scan for Variants Associated with Early-Onset Prostate Cancer
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Zhengrong Gao, Anna Johnson, William B. Isaacs, Qing Duan, Yun Li, Kathleen A. Cooney, Ethan M. Lange, Ge Li, Jessica V. Ribado, Yurong Lu, Jianfeng Xu, Siqun Zheng, Yunfei Wang, Jin Li, Kimberly A. Zuhlke, and Gregory R. Keele
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Adult ,Male ,medicine.medical_specialty ,Genotype ,Urology ,lcsh:Medicine ,Genome-wide association study ,Disease ,Bioinformatics ,Polymorphism, Single Nucleotide ,03 medical and health sciences ,Prostate cancer ,0302 clinical medicine ,Breast cancer ,Epidemiology ,medicine ,Genome-Wide Association Studies ,Genetics ,Cancer Genetics ,Medicine and Health Sciences ,Humans ,lcsh:Science ,Genetic Association Studies ,030304 developmental biology ,Genetic association ,0303 health sciences ,Multidisciplinary ,business.industry ,Prostate Cancer ,lcsh:R ,Prostate Diseases ,Cancer ,Biology and Life Sciences ,Computational Biology ,Cancers and Neoplasms ,Prostatic Neoplasms ,Human Genetics ,Middle Aged ,medicine.disease ,Genome Analysis ,3. Good health ,Genitourinary Tract Tumors ,Oncology ,030220 oncology & carcinogenesis ,lcsh:Q ,business ,Research Article - Abstract
Prostate cancer is the most common non-skin cancer and the second leading cause of cancer related mortality for men in the United States. There is strong empirical and epidemiological evidence supporting a stronger role of genetics in early-onset prostate cancer. We performed a genome-wide association scan for early-onset prostate cancer. Novel aspects of this study include the focus on early-onset disease (defined as men with prostate cancer diagnosed before age 56 years) and use of publically available control genotype data from previous genome-wide association studies. We found genome-wide significant (p
- Published
- 2014
15. 2151 ASSOCIATION OF PROSTATE CANCER RISK SNPS WITH AGE AT TREATMENT: POTENTIAL FOR PREDICTION OF EARLY ONSET OF DISEASE
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Seong Tae Kim, Siqun Zheng, Henrik Grönberg, A. Karim Kader, Alan W. Partin, Jianfeng Xu, William B. Isaacs, Jielin Sun, and Patrick C. Walsh
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Oncology ,Prostate cancer risk ,medicine.medical_specialty ,business.industry ,Urology ,Cancer ,Single-nucleotide polymorphism ,Disease ,medicine.disease ,Internal medicine ,Epidemiology of cancer ,Medicine ,business ,Early onset - Published
- 2010
16. CYP17 polymorphisms in relation to risks of prostate cancer and benign prostatic hyperplasia: a population-based study in China
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Siqun Zheng, Jie Deng, Ruth M. Pfeiffer, Deborah A. Meyers, Yu-Tang Gao, Ann W. Hsing, Jianfeng Xu, M. Patricia Madigan, Baoli Chang, and Frank Z. Stanczyk
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Oncology ,Male ,Cancer Research ,medicine.medical_specialty ,China ,Genotype ,medicine.drug_class ,Prostate Diseases ,Population ,Prostatic Hyperplasia ,Prostate cancer ,Prostate ,Risk Factors ,Internal medicine ,medicine ,Biomarkers, Tumor ,Humans ,Genetic Predisposition to Disease ,education ,Gonadal Steroid Hormones ,Promoter Regions, Genetic ,Aged ,Aged, 80 and over ,education.field_of_study ,Polymorphism, Genetic ,business.industry ,Case-control study ,Prostatic Neoplasms ,Steroid 17-alpha-Hydroxylase ,Odds ratio ,Middle Aged ,Androgen ,medicine.disease ,Endocrinology ,medicine.anatomical_structure ,Cross-Sectional Studies ,Case-Control Studies ,business - Abstract
Because androgens likely play a key role in prostate growth and prostate cancer development, variants of genes involved in androgen biosynthesis may be related to prostate cancer risk. The enzyme P450c17alpha, encoded by the CYP17 gene, catalyzes the conversion of progesterone and pregnenolone into precursors of potent androgens. In the 5' promoter region of the CYP17 gene, a T (A1 allele) to C substitution (A2 allele) has been hypothesized to increase CYP17 gene expression, resulting in higher levels of androgens. To investigate a possible role of CYP17 in prostate diseases, we evaluated the risk of prostate cancer and benign prostatic hyperplasia (BPH) in relation to variation in CYP17 genotype in a population-based case-control study conducted in Shanghai, China. The study included 174 prostate cancer cases, 182 BPH cases and 274 population controls. We observed no statistically significant overall associations of CYP17 genotypes with prostate cancer risk, although associations of the A1/A1 (odds ratio (OR) =1.42, 95% confidence interval (CI) 0.83-2.48) and A1/A2 (OR 1.41, 95% CI 0.91-2.17) genotypes with prostate cancer were suggested. A similar association of the A1/A1 genotype with BPH was suggested. We found no associations of CYP17 genotypes with serum sex hormone levels or other biomarkers after correction for multiple comparisons. Large population-based studies are needed to clarify whether CYP17 plays a role in prostate cancer risk and whether genotype effects vary in different racial/ethnic and other subgroups.
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- 2003
17. POD-02.10: Individual and Cumulative Effect of Prostate Cancer Risk-associated Variants on Clinicopathologic Variables in 5,895 Prostate Cancer Patients
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Helen L. Fedor, Siqun Zheng, J. I. Epstein, Patrick C. Walsh, Andrew Karim Kader, Angelo M. DeMarzo, W. Isaacs, Jishan Sun, Jianfeng Xu, and Alan W. Partin
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Oncology ,Prostate cancer risk ,medicine.medical_specialty ,Prostate cancer ,business.industry ,Urology ,Internal medicine ,medicine ,business ,medicine.disease ,Cumulative effect - Published
- 2009
18. POD-02.09: Estimation of Absolute Risk for Prostate Cancer from Blood DNA
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Henrik Grönberg, Andrew Karim Kader, Jishan Sun, Jianfeng Xu, W. Isaacs, Sara Lindström, Fredrik Wiklund, J.-E. Johansson, Fang-Chi Hsu, and Siqun Zheng
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PCA3 ,Oncology ,Estimation ,medicine.medical_specialty ,business.industry ,Urology ,Absolute risk reduction ,medicine.disease ,Prostate cancer ,chemistry.chemical_compound ,Point of delivery ,chemistry ,Internal medicine ,Medicine ,business ,DNA - Published
- 2009
19. 669: Polymorphisms in endothelial function genes are associated with pregnancy outcome in a multi-ethnic North Carolina sample
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Elizabeth R. Hauser, John M. Thorp, Andrew F. Olshan, David R. Crosslin, Monique Chireau, Carolyn M. Salafia, and Siqun Zheng
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Gynecology ,medicine.medical_specialty ,Pregnancy ,Obstetrics ,business.industry ,medicine ,Ethnic group ,Obstetrics and Gynecology ,Sample (statistics) ,business ,medicine.disease ,Outcome (probability) ,Function genes - Published
- 2007
20. 668: Endothelial function gene polymorphisms are associated with pregnancy outcomes, independent of placental vascular disease
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Carolyn M. Salafia, Elizabeth R. Hauser, David R. Crosslin, Monique Chireau, Andrew F. Olshan, Siqun Zheng, and John M. Thorp
- Subjects
Gynecology ,medicine.medical_specialty ,Pregnancy ,biology ,business.industry ,Vascular disease ,Obstetrics and Gynecology ,Single-nucleotide polymorphism ,Disease ,medicine.disease ,Obstetrics and gynaecology ,Methylenetetrahydrofolate reductase ,Genotype ,Epidemiology ,medicine ,biology.protein ,business - Abstract
PREGNANCY OUTCOMES, INDEPENDENT OF PLACENTAL VASCULAR DISEASE MONIQUE CHIREAU, DAVID CROSSLIN, ELIZABETH HAUSER, ANDREW OLSHAN, SIQUN ZHENG, CAROLYN M SALAFIA, JOHN THORP, Duke University, Obstetrics and Gynecology, Durham, North Carolina, Duke University, Center for Human Genetics, Durham, North Carolina, University of North Carolina at Chapel Hill, Epidemiology, Chapel Hill, North Carolina, Wake Forest University-Baptist Medical Center, Center for Human Genomics, , North Carolina, Columbia-Presbyterian Coll. of Physicians and Surgeons, Pathology, New York, New York, University of North Carolina at Chapel Hill, Obstetrics and Gynecology, Chapel Hill, North Carolina OBJECTIVE: To determine whether single nucleotide polymorphisms (SNPs) in endothelial function genes are associated with timing of delivery and fetal growth, through the intermediate of placental vascular disease, measured by chronic inflammation (CI) or vascular pathology (VP) on placental histology. STUDY DESIGN: We performed a case-control study of the association between SNPs in endothelial function genes, VP or CI, and preterm birth (PTB) or smallfor-gestational-age (SGA) birth. Genotyping was carried out on 476 women from the Pregnancy, Infection and Nutrition Study at the University of North CarolinaChapel Hill, using MALDI-TOF. Genes studied were known to be associated with adult cardiovascular disease and included Apo A1 G75A, Apo A5 T1131C, ApoC3 C482T, endothelin-1 K198N, E-selectin A561C, ICAM-1 K469E, IL-6 G174C, MTHFR A222V, VEG-F C936T, and VEG-F C2568A. Placentas were scored by a placental pathologist. Univariate and multivariate logistic regression analyses were performed. RESULTS: 83% of women were White and 17% Black. 15.2% and 7% of births were preterm or SGA, respectively. VP was noted in 34% and CI in 17% of placentas. VP was associated with decreased risk for SGA independent of genotype. Among White women the ApoC3 SNP was associated with decreased risk for VP (p 0.04, OR 0.69, CI 0.483-0.989). In PTB models including genotype, placental histology and maternal characteristics, the EDT-1 K469E SNP was associated with decreased PTB risk (p 0.006, OR 0.54, CI 0.35-0.84), independent of VP or CI. CONCLUSION: VP is associated with decreased risk for SGA. The endothelin-1 K198Ar SNP appears to be associated with reduced risk of PTB, but not with VP or CI, suggesting that it does not act through the intermediate of placental vascular disease; our power to detect differences for CI was low given sample size. Geneenvironment interactions may modulate these associations. Future studies of associations between genotype and ethnicity need to more fully account for genetic variation.
- Published
- 2007
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