1. Customized massive parallel sequencing panel for diagnosis of pulmonary arterial hypertension
- Author
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Jair Antonio Tenorio Castaño, Ignacio Hernández-Gonzalez, Natalia Gallego, Carmen Pérez-Olivares, Nuria Ochoa Parra, Pedro Arias, Elena Granda, Gonzalo Gómez Acebo, Mauro Lago-Docampo, Julian Palomino-Doza, Manuel López Meseguer, María Jesús del Cerro, Spanish PAH Consortium, Diana Valverde, Pablo Lapunzina, and Pilar Escribano-Subías
- Subjects
Heart Defects, Congenital ,Male ,0301 basic medicine ,medicine.medical_specialty ,lcsh:QH426-470 ,Heart disease ,3205.08 Enfermedades Pulmonares ,Inheritance Patterns ,Presumptive diagnosis ,Disease ,2410.07 Genética Humana ,030204 cardiovascular system & hematology ,digenic inheritance ,Article ,Cohort Studies ,03 medical and health sciences ,0302 clinical medicine ,Internal medicine ,pulmonary arterial hypertension ,Genetics ,medicine ,Humans ,Familial Primary Pulmonary Hypertension ,Genetic Predisposition to Disease ,Genetic Testing ,Connective Tissue Diseases ,Genetic Association Studies ,Genetics (clinical) ,Genetic testing ,Massive parallel sequencing ,and genetics ,medicine.diagnostic_test ,business.industry ,3201.02 Genética Clínica ,High-Throughput Nucleotide Sequencing ,massive parallel sequencing ,medicine.disease ,Connective tissue disease ,Pedigree ,lcsh:Genetics ,030104 developmental biology ,NGS ,Mutation ,Etiology ,Pulmonary Veno-Occlusive Disease ,Female ,CTD ,business - Abstract
Pulmonary arterial hypertension is a very infrequent disease, with a variable etiology and clinical expressivity, making sometimes the clinical diagnosis a challenge. Current classification based on clinical features does not reflect the underlying molecular profiling of these groups. The advance in massive parallel sequencing in PAH has allowed for the describing of several new causative and susceptibility genes related to PAH, improving overall patient diagnosis. In order to address the molecular diagnosis of patients with PAH we designed, validated, and routinely applied a custom panel including 21 genes. Three hundred patients from the National Spanish PAH Registry (REHAP) were included in the analysis. A custom script was developed to annotate and filter the variants. Variant classification was performed according to the ACMG guidelines. Pathogenic and likely pathogenic variants have been found in 15% of the patients with 12% of variants of unknown significance (VUS). We have found variants in patients with connective tissue disease (CTD) and congenital heart disease (CHD). In addition, in a small proportion of patients (1.75%), we observed a possible digenic mode of inheritance. These results stand out the importance of the genetic testing of patients with associated forms of PAH (i.e., CHD and CTD) additionally to the classical IPAH and HPAH forms. Molecular confirmation of the clinical presumptive diagnosis is required in cases with a high clinical overlapping to carry out proper management and follow up of the individuals with the disease. Instituto de Salud Carlos III (España) | Ref. FISPI18/01233 Xunta de Galicia | Ref. ED481A-2018/304
- Published
- 2020