1. Serial circulating tumor DNA to predict early recurrence in patients with hepatocellular carcinoma: a prospective study
- Author
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Wei-Ren Liu, Run Huang, Zhi Dai, Gui-Qi Zhu, Han Wang, Wei-Feng Qu, Zhen-Bin Ding, Xi-Fei Jiang, Yuan-Fei Peng, Yuan Fang, Hai-Xiang Sun, Jun Gao, Zheng Tang, Jia Fan, Ying-Hong Shi, Shushu Song, Pei-Yun Zhou, Chen-Yang Tao, and Jian Zhou
- Subjects
Male ,Neuroblastoma RAS viral oncogene homolog ,Oncology ,Cancer Research ,medicine.medical_specialty ,Carcinoma, Hepatocellular ,Gene mutation ,Germline ,Circulating Tumor DNA ,Gene Frequency ,Internal medicine ,Genetics ,Humans ,Medicine ,In patient ,Prospective Studies ,Prospective cohort study ,RC254-282 ,Research Articles ,business.industry ,Liver Neoplasms ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,ctDNA ,hepatocellular carcinoma ,General Medicine ,Middle Aged ,medicine.disease ,tumor recurrence ,Circulating tumor DNA ,Hepatocellular carcinoma ,biomarker ,Molecular Medicine ,Biomarker (medicine) ,Female ,Neoplasm Recurrence, Local ,business ,Research Article - Abstract
We studied the value of circulating tumor DNA (ctDNA) in predicting early postoperative tumor recurrence and monitoring tumor burden in patients with hepatocellular carcinoma (HCC). Plasma‐free DNA, germline DNA, and tissue DNA were isolated from 41 patients with HCC. Serial ctDNAs were analyzed by next‐generation sequencing before and after operation. Whole‐exome sequencing was used to detect the DNA of HCC and adjacent tissues. In total, 47 gene mutations were identified in the ctDNA of the 41 patients analyzed before surgery. ctDNA was detected in 63.4% and 46% of the patient plasma pre‐ and postoperation, respectively. The preoperative ctDNA positivity rate was significantly lower in the nonrecurrence group than in the recurrence group. With a median follow‐up of 17.7 months, nine patients (22%) experienced tumor recurrence. ctDNA positivity at two time‐points was associated with significantly shorter recurrence‐free survival (RFS). Tumors with NRAS, NEF2L2, and MET mutations had significantly shorter times to recurrence than those without mutations and showed high recurrence prediction performance by machine learning. Multivariate analyses showed that the median variant allele frequency (VAF) of mutations in preoperative ctDNA was a strong independent predictor of RFS. ctDNA is a real‐time monitoring indicator that can accurately reflect tumor burden. The median VAF of baseline ctDNA is a strong independent predictor of RFS in individuals with HCC., Here, we studied the value of circulating tumor DNA (ctDNA), in combination with germline and tissue DNA by whole‐exome sequencing in patients withhepatocellular carcinoma (HCC). Our analysis demonstrated that ctDNA may serve as a real‐time monitoring indicator by accurately reflecting tumor burden, and as a strong independent predictor of recurrence‐free survival in HCC.
- Published
- 2021
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