1. New variant identified in major susceptibility locus to tuberculosis on chromosomal region 8q12-q13 in Moroccan population: a case control study.
- Author
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Qrafli M, Asekkaj I, Bourkadi JE, El Aouad R, and Sadki K
- Subjects
- Adult, Alleles, Case-Control Studies, Female, Genetic Variation, Genotype, Humans, Male, Middle Aged, Morocco, Polymorphism, Single Nucleotide, Tuberculosis, Pulmonary diagnosis, Black People genetics, Chromosomes, Human, Pair 8, Genetic Predisposition to Disease, Intracellular Signaling Peptides and Proteins genetics, Tuberculosis, Pulmonary genetics
- Abstract
Background: Tuberculosis (TB) remains a global health problem. Several studies have implicated genetic host factors in predisposing populations to TB disease. In this study, we have selected NSMAF (Neutral Sphingomyelinase Activation Associated Factor) as a candidate gene to evaluate its level of association with TB disease in a Moroccan population for two reasons: first, this gene is located in a major susceptibility locus on chromosomal region 8q12-q13 in the Moroccan population, closely linked to the CYP7A1 gene, which was previously shown to be associated with TB disease; second, NSMAF has an important role in immune system function., Methods: We conducted a case-control study including 269 genomic DNA samples extracted from pulmonary TB (PTB) patients and healthy controls (HC). We genotyped three selected SNPs (rs2228505, rs36067275 and rs10505004) using TaqMan® allelic discrimination assays., Results: Only the rs1050504 C > T genotype was observed to be significantly associated with an increased risk for developing pulmonary TB (41.8% vs 27%, OR 1.95, 95% CI 1.16-3.27; p = 0.01). In contrast, the TT genotype was significantly associated with resistance to PTB (4.1% vs 15.6%, OR 0.23, 95% CI 0.08-0.63; p = 0.002)., Conclusion: Our findings suggest that genetic variations in the NSMAF gene could modulate the risk of PTB development in a Moroccan population. Further functional studies are needed to confirm these findings.
- Published
- 2017
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