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Zooplankton community structure is often characterized by using traits as a function of environmental conditions. However, trait-based knowledge on Southern Ocean mesozooplankton is limited, particularly regarding size and elemental composition. Nine stations around the northern Antarctic Peninsula were sampled during austral autumn to investigate the spatial variability in mesozooplankton taxonomic composition, size structure and stoichiometry in relation to environmental predictors, but also to the abundance of Antarctic krill and salps. The mesozooplankton communities around the South Shetland Islands were dominated by small copepods, mainly Oithonidae and Oncaeidae, while stations along the frontal zones and the Weddell Sea revealed a higher proportion of larger organisms. Spatial differences in taxonomic composition and size structure were significantly altered by salp abundance, with stronger impact on small-sized copepods. Furthermore, taxonomic composition was significantly related to temperature and total carbon but not chlorophyll a, indicating reduced relevance of phytoplankton derived food during autumn. Bulk mesozooplankton stoichiometry, however, showed no significant relation to environmental conditions, mesozooplankton size structure or dominant taxa. Our results indicate that aside from bottom-up related drivers, top-down effects of salps may lead to mesozooplankton communities that are more dominated by larger size classes with potential consequences for trophic interactions and nutrient fluxes.

Harmful algal blooms (HABs) are globally increasing in number and spatial extent. However, their propagation dynamics along environmental gradients and the associated interplay of abiotic factors and biotic interactions are still poorly understood. In this study, a nutrient gradient was established in a linear meta‐ecosystem setup of five interconnected flasks containing an artificially assembled phytoplankton community. The harmful dinoflagellate Alexandrium catenella was introduced into different positions along the nutrient gradient to investigate dispersal and spatial community dynamics. Overall, total algal biovolume increased, while community evenness decreased with increasing nutrient concentrations along the gradient. Alexandrium was able to disperse through all flasks. On the regional scale, diatoms dominated the community, whereas on the local scale the dinoflagellate showed higher contributions at low nutrient concentrations and dominated the community at the lowest nutrient concentration, but only when initiated into this flask. A control treatment without dispersal revealed an even stronger dominance of Alexandrium at the lowest nutrient concentration, indicating that dispersal and the associated nutrient exchange may weaken dinoflagellate dominance under low nutrient conditions. This study presents a first approach to experimentally investigate spatial dynamics and ecological interactions of a harmful dinoflagellate along an environmental gradient in a meta‐ecosystem setup, which has the potential to substantially enhance our understanding of the relevance of dispersal for HAB formation and propagation in combination with local environmental factors., Volkswagen Foundation http://dx.doi.org/10.13039/501100001663

Wadden Sea macrozoobenthos has access to food sources of different quality. In addition to microphytobenthos (MPB) and macroalgae (e.g. Fucus vesiculosus Linnaeus, 1753), the invasive C4 grass Spartina anglica C.E. Hubbard has become an abundant primary producer in the Wadden Sea. To elucidate the role of different primary producers for the nutrition of typical Wadden Sea consumers, we conducted a mesocosm experiment with four food treatments ( S. anglica, F. vesiculosus , MPB and all three resources together) under a simulated tidal cycle. We used consumers of different feeding types—the omnivorous polychaete Hediste diversicolor (O.F. Muller, 1776), the interface-feeding bivalve Limecola balthica (Linnaeus, 1758) and the surface deposit-feeding snail Peringia ulvae (Pennant, 1777)—and analyzed their biomass, δ13C and δ15 N stable isotope values and fatty acid (FA) profiles. After 4 weeks, the biomass of H. diversicolor increased in treatments that contained F. vesiculosus, but decreased in the treatment with MPB. δ13C values of H. diversicolor reflected those of the food sources provided and FA profiles varied strongly between the treatments, indicating feeding on copepods and bacteria as well as macrophytes. The biomass of P. ulvae significantly increased in treatments with S. anglica and all three resources. However, δ13C values of P. ulvae differed significantly between the treatments and were unrelated to the food sources except for MPB. FA profiles confirmed the assimilation of MPB in this species. δ13C values and FA composition of L. balthica were similar in each of the treatments and did not resemble the resources provided. Instead, the high proportion of respective marker FAs indicated feeding on plankton . δ 15N values of the consumer species declined significantly in the order H. diversicolor > L. balthica > P. ulvae in each of the treatments. These results indicate different strategies in food source use of the three consumer species with the performance of the generalist feeders H. diversicolor and P. ulvae exceeding that of the selective feeder L. balthica.

Trait variation among heterospecific and conspecific organisms may substantially affect community and food web dynamics. While the relevance of competition and feeding traits have been widely studied for different consumer species, studies on intraspecific differences are more scarce, partly owing to difficulties in distinguishing different clones of the same species. Here, we investigate how intraspecific trait variation affects the competition between the freshwater ciliates Euplotes octocarinatus and Coleps hirtus in a nitrogen‐limited chemostat system. The ciliates competed for the microalgae Cryptomonas sp. (Cry) and Navicula pelliculosa (Nav), and the bacteria present in the cultures over a period of 33 days. We used monoclonal Euplotes and three different Coleps clones (Col 1, Col 2, and Col 3) in the experiment that could be distinguished by a newly developed rDNA‐based molecular assay based on the internal transcribed spacer (ITS) regions. While Euplotes feeds on Cry and on bacteria, the Coleps clones cannot survive on bacteria alone but feed on both Cry and Nav with clone‐specific rates. Experimental treatments comprised two‐species mixtures of Euplotes and one or all of the three different Coleps clones, respectively. We found intraspecific variation in the traits “selectivity” and “maximum ingestion rate” for the different algae to significantly affect the competitive outcome between the two ciliate species. As Nav quickly escaped top‐down control and likely reached a state of low food quality, ciliate competition was strongly determined by the preference of different Coleps clones for Cry as opposed to feeding on Nav. In addition, the ability of Euplotes to use bacteria as an alternative food source strengthened its persistence once Cry was depleted. Hence, trait variation at both trophic levels codetermined the population dynamics and the outcome of species competition., Intraspecific variation in the traits “selectivity” and “maximum ingestion rate” for their prey significantly affected the competition between two freshwater ciliate species. Exclusion of either one of the ciliates or long‐term persistence depended on which of the competitors benefited more from feeding on a less abundant algal resource of high food quality, on severe nutrient limitation that affected the food quality of the dominant algal resource, and on the ability of one competitor to use bacteria as an alternative food source. Hence, trait variation at both trophic levels codetermined the population dynamics and the outcome of species competition.

Pronounced atmospheric and oceanic warming along the West Antarctic Peninsula (WAP) has resulted in abundance shifts in populations of Antarctic krill and Salpa thompsoni determined by changes in the timing of sea-ice advance, the duration of sea-ice cover and food availability. Krill and salps represent the most important macrozooplankton grazers at the WAP, but differ profoundly in their feeding biology, population dynamics and stoichiometry of excretion products with potential consequences for the relative availability of dissolved nitrogen and phosphorus. Alternation of the dissolved nutrient pool due to shifts in krill and salp densities have been hypothesized but never explicitly tested by using observational data. We therefore used the Palmer LTER dataset in order to investigate whether the dominance of either grazer is related with the observed dissolved nitrogen:phosphorus (N:P) ratios at the WAP. Across the whole sampling grid, the dominance of salps over krill was significantly correlated to higher concentrations of both N and P as well as a higher N:P ratios. Using actual long-term data, our study shows for the first time that changes in key grazer dominance may have consequences for the dynamics of dissolved nitrogen and phosphorus at the WAP.

Tidal flats are subject to dynamic processes, characterized by sedimentation and erosion, which become more important in times of climate change. To investigate impacts of elevation levels on ecosystem functioning, we focused on macrozoobenthos as an essential ecosystem component that links trophic levels and determines sediment structure. Therefore, three elevation levels of six experimental islands (each 2 × 6 m) and six natural reference sites (nearby tidal flats) were sampled for species richness, abundance and biomass in the back-barrier system of the island of Spiekeroog (German Wadden Sea, southern North Sea) from 2014 to 2016. Reference sites had constant biodiversity and abundance over time that were higher compared to the three elevations of the experimental islands. At the lowest elevation, the community became more diverse over time, including marine and terrestrial taxa. At the middle elevation, community shifted from a marine species inventory over an opportunist-dominated assemblage to a less diverse community dominated by Enchytraeidae (Oligochaeta). The community of the highest elevation mostly remained constant, resembling the second, opportunistic community from the middle elevation that was dominated by the snail Peringia ulvae (Pennant, 1777) and the oligochaetes Enchytraeidae spp. and Tubificoides benedii (d'Udekem, 1855). Correspondingly, food web structure was more complex and comprised more trophic interactions at the lowest elevation compared to the other elevations mainly inhabited by deposit feeders. Results demonstrate negative impacts of increased sediment elevation on macrofaunal biodiversity and functional diversity, originating from reduced inundation and vegetation establishment.

Ptacnik, Robert ... et al.-- 10 pages, 4 figures, 1 table, supplementary information https://dx.doi.org/10.1038/srep29286, Mixotrophs combine photosynthesis with phagotrophy to cover their demands in energy and essential nutrients. This gives them a competitive advantage under oligotropihc conditions, where nutrients and bacteria concentrations are low. As the advantage for the mixotroph depends on light, the competition between mixo- and heterotrophic bacterivores should be regulated by light. To test this hypothesis, we incubated natural plankton from the ultra-oligotrophic Eastern Mediterranean in a set of mesocosms maintained at 4 light levels spanning a 10-fold light gradient. Picoplankton (heterotrophic bacteria (HB), pico-sized cyanobacteria, and small-sized flagellates) showed the fastest and most marked response to light, with pronounced predator-prey cycles, in the high-light treatments. Albeit cell specific activity of heterotrophic bacteria was constant across the light gradient, bacterial abundances exhibited an inverse relationship with light. This pattern was explained by light-induced top-down control of HB by bacterivorous phototrophic eukaryotes (PE), which was evidenced by a significant inverse relationship between HB net growth rate and PE abundances. Our results show that light mediates the impact of mixotrophic bacterivores. As mixo- and heterotrophs differ in the way they remineralize nutrients, these results have far-reaching implications for how nutrient cycling is affected by light, The experiment was financed by the European Union Seventh Framework Program MESOAQUA (FP7/2009-2013) coordinated by JCN under grant agreement no. 228224. R.P. further acknowledges financial support by the German Research Council (DFG Pt 5/3-1), JMG by Spanish project REMEI (CTM2015-70340) and AC by project PROTOS (CTM2009-08783) from the Spanish Ministry of Economy and Competitiveness

The structure and genetic diversity of marine protistan assemblages were investigated in the upper 500 m of the water column at a Pacific Ocean time-series station off the coast of Southern California. Deoxyribonucleic acid sequence-based microbial eukaryote diversity was examined in January, April, July, and October of 2001 at four depths (5 m, chlorophyll maximum [CM], 150 m, and 500 m). A total of 2956 partial 18S ribosomal ribonucleic acid gene sequences yielded representatives from most of the major eukaryotic lineages. Notable among the taxonomic groups were recently described lineages of stramenopiles, alveolates, and euglenozoa. A large number of polycystine and acantharean sequences were observed at depth. Pairwise sequence analysis was performed to establish operational taxonomic units (OTUs) that were then used to estimate the unsampled protistan diversity by parametric and nonparametric techniques. A total of 2246 protistan sequences grouped into 377 distinct OTUs, with remaining sequences attributed to metazoa. Protistan richness estimates ranged from , 600 to 1500 OTUs when all depths and seasons were combined into a single data set. Seasonal and depth-related trends in the observed protistan diversity were apparent from comparisons of univariate and multivariate analyses. Cluster analysis combined with nonmetric multidimensional scaling and analysis of similarity testing identified distinct protistan assemblages at the shallowest depths (5 m and CM) for each season, which were significantly different (p , 0.03) from assemblages at the two deepest depths (150 and 500 m) where seasonal changes in the protistan assemblage were not apparent.

Incomplete knowledge of acantharian life cycles has hampered their study and limited our understanding of their role in the vertical flux of carbon and strontium. Molecular tools can help identify enigmatic life stages and offer insights into aspects of acantharian biology and evolution. We inferred the phylogenetic position of acantharian sequences from shallow water, as well as acantharian-like clone sequences from 500 and 880 m in the San Pedro Channel, California. The analyses included validated acantharian and polycystine sequences from public databases with environmental clone sequences related to acantharia and used Bayesian inference methods. Our analysis demonstrated strong support for two branches of unidentified organisms that are closely related to, but possibly distinct from the Acantharea. We also found evidence of acantharian sequences from mesopelagic environments branching within the chaunacanthid clade, although the morphology of these organisms is presently unknown. HRP-conjugated probes were developed to target Acantharea and phylotypes from Unidentified Clade 1 using Catalyzed Reporter Deposition Fluorescence In Situ Hybridization (CARD-FISH) on samples collected at 500 m. Our CARD-FISH experiments targeting phylotypes from an unidentified clade offer preliminary glimpses into the morphology of these protists, while a morphology for the aphotic acantharian lineages remains unknown at this time.

Mixotrophic nanoflagellates (MNF) were quantified in plankton and sea ice of the Ross Sea, Antarctica, during austral spring. Tracer experiments using fluorescently labeled bacteria (FLB) were conducted to enumerate MNF and determine their contribution to total chloroplastidic and total bacterivorous nanoflagellates. Absolute abundances of MNF were typically

A new method based on quantitative real-time polymerase chain reaction (qPCR) was developed and applied to quantify the red tide dinoflagellate Lingulodinium polyedrum in natural seawater samples and in laboratory cultures. The method uses a Molecular Beacontrade mark approach to target a species-specific region of the small subunit ribosomal RNA gene. The accuracy of the method was verified by microscopical counts using cultures of the dinoflagellate isolated from coastal waters near Los Angeles, CA, and with natural water samples spiked with cultured L. polyedrum. The method was applied to document the pattern and timing of vertical migration by the dinoflagellate in a 2-m water column on an 11:13 h light/dark photoperiod established in the laboratory. Positive phototaxis of L. polyedrum resulted in dense aggregations of the dinoflagellate within the top few centimeters of the water column during the light period. This pattern of distribution was readily established by both methods, although abundances of L. polyedrum determined using qPCR were higher than abundances determined by microscopy in the morning and lower in the afternoon and evening. These differences may have been a consequence of variability in the DNA content per cell because of synchrony of cell division. Counts using both methods to analyze natural samples collected from coastal waters in the Long Beach-Los Angeles area and adjacent San Pedro Channel were in close agreement. However, the qPCR method exhibited greater sensitivity than the microscopical method when L. polyedrum was present at low abundances, and qPCR had a much higher rate of sample throughput than microscopy. The development of this new approach for enumerating L. polyedrum provides a useful tool for studying the ecology of this important red tide species.

In the western Baltic Sea, the highly competitive blue mussel Mytilus edulis tends to monopolize shallow water hard substrata. In many habitats, mussel dominance is mainly controlled by the generalist predator Carcinus maenas. These predator-prey interactions seem to be affected by mussel size (relative to crab size) and mussel epibionts. There is a clear relationship between prey size and predator size as suggested by the optimal foraging theory: Each crab size class preferentially preys on a certain mussel size class. Preferred prey size increases with crab size. Epibionts on Mytilus, however, influence this simple pattern of feeding preferences by crabs. When offered similarly sized mussels, crabs prefer Balanus-fouled mussels over clean mussels. There is, however, a hierarchy of factors: the influence of attractive epibiotic barnacles is weaker than the factor 'mussel size'. Testing small mussels against large mussels, presence or absence of epibiotic barnacles does not significantly alter preferences caused by mussel size. Balanus enhanced crab predation on mussels in two ways: Additional food gain and, probably more important, improvement in handling of the prey. The latter effect is illustrated by the fact that artificial barnacle mimics increased crab predation on mussels to the same extent as do live barnacles. We conclude that crab predation preferences follows the optimal foraging model when prey belong to different size classes, whereas within size classes crab preferences is controlled by epibionts