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The Microperus ambrosia beetle fauna of Taiwan is reviewed. Microperus alpha (Beeson, 1929), M. kadoyamaensis (Murayama, 1934), M. kirishimanus (Murayama, 1955), M. perparvus (Sampson, 1922), M. quercicola (Eggers, 1926) have all been previously recorded from Taiwan. Microperus bucolicus Sittichaya, Smith & Beaver, 2021 and M. latesalebrinus Smith, Beaver & Cognato, 2020 are new country records for Taiwan. Of which, the males of M. alpha, M. bucolicus, M. kadoyamaensis, M. latesalebrinus, M. perparvus, and M. quercicola are described for the first time. In this study, we document a likely occurrence of mycocleptism by M. bucolicus. Diagnostic characters, biological data and a key to species in Taiwan are provided. [ABSTRACT FROM AUTHOR]

This Virtual Issue "The biology of wood", highlights the central role of wood biology in basic plant science, as well as critical ecological, environmental, economic and societal issues. It seems as though the plastid and mitochondrial carbon metabolism pathway genes show a coordinated expression with their nuclear gene counterparts, and with specific stages of wood development. The functional characterization of a poplar Class I KNOX gene, I KNAT2/6b i , concluded that this gene is important for the regulation of cell differentiation, in part through its influence on the expression of NAC transcription factors (Zhao I et al i ., [14], in this issue of I New Phytologist i , pp. 1531-1543). Integration of these data showed an enrichment of specific epigenetic markers with genes expressed during wood formation, and together represent an important advancement in our global understanding of gene regulation during wood formation. [Extracted from the article]

Choice tests are a standard method to determine preferences in bio-assays, e.g. for food types and food additives such as bait attractants and toxicants. Choice between food additives can be determined only when the food substrate is sufficiently homogeneous. This is difficult to achieve for wood eating organisms as wood is a highly variable biological material, even within a tree species due to the age of the tree (e.g. sapwood vs. heartwood), and components therein (sugar, starch, cellulose and lignin). The current practice to minimise variation is to use wood from the same tree, yet the variation can still be large and the quantity of wood from one tree may be insufficient. We used wood samples of identical volume from multiple sources, measured three physical properties (dry weight, moisture absorption and reflected light intensity), then ranked and clustered the samples using fuzzy c-means clustering. A reverse analysis of the clustered samples found a high correlation between their physical properties and their source of origin. This suggested approach allows a quantifiable, consistent, repeatable, simple and quick method to maximize control over similarity of wood used in choice tests. [ABSTRACT FROM AUTHOR]

Oxalic acid is a prevalent fungal metabolite with versatile roles in growth and nutrition, including degradation of plant biomass. However, the toxicity of oxalic acid makes regulation of its intra- and extracellular concentration crucial. To increase the knowledge of fungal oxalate metabolism, a transcriptional level study on oxalate-catabolising genes was performed with an effective lignin-degrading white-rot fungus Dichomitus squalens, which has demonstrated particular abilities in production and degradation of oxalic acid. The expression of oxalic-acid decomposing oxalate decarboxylase (ODC) and formic-acid decomposing formate dehydrogenase (FDH) encoding genes was followed during the growth of D. squalens on its natural spruce wood substrate. The effect of high proton concentration on the regulation of the oxalate-catabolising genes was determined after addition of organic acid (oxalic acid) and inorganic acid (hydrochloric acid) to the liquid cultures of D. squalens. In order to evaluate the co-expression of oxalate-catabolising and manganese peroxidase (MnP) encoding genes, the expression of one MnP encoding gene, mnp1, of D. squalens was also surveyed in the solid state and liquid cultures. Sequential action of ODC and FDH encoding genes was detected in the studied cultivations. The odc1, fdh2 and fdh3 genes of D. squalens showed constitutive expression, whereas ODC2 and FHD1 most likely are the main responsible enzymes for detoxification of high concentrations of oxalic and formic acids. The results also confirmed the central role of ODC1 when D. squalens grows on coniferous wood. Phylogenetic analysis revealed that fungal ODCs have evolved from at least two gene copies whereas FDHs have a single ancestral gene. As a conclusion, the multiplicity of oxalate-catabolising genes and their differential regulation on wood and in acid-amended cultures of D. squalens point to divergent physiological roles for the corresponding enzymes. [ABSTRACT FROM AUTHOR]

Betula platyphylla Suk (birch) is a fast-growing woody species that is important in pulp industries and the biofuels. However, as an important pulp species, few studies had been performed on its wood formation. In the present study, we investigated the molecular responses of birch xylem to artificial bending and gravitational stimuli. After trunks of birch trees were subjected to bending for 8 weeks, the cellulose content was significantly greater in tension wood (TW) than in opposite wood (OW) or normal wood (NW), whereas the lignin content in TW was significantly lower than that in OW and NW. In addition, TW grew more rapidly than OW and generated TW-specific fibers with an additional G-layer. Three transcriptome libraries were constructed from TW, OW and NW of B. platyphylla, respectively, after the plants were subjected to artificial bending. Overall, 80,909 nonredundant unigenes with a mean size of 768 nt were assembled. Expression profiles were generated, and 9,684 genes were found to be significantly differentially expressed among the TW, OW and NW libraries. These included genes involved in secondary cell wall structure, wood composition, and cellulose or lignin biosynthesis. Our study showed that during TW formation, genes involved in cellulose synthesis were induced, while the expression of lignin synthesis-related genes decreased, resulting in increased cellulose content and decreased lignin levels in TW. In addition, fasciclin-like arabinogalactan proteins play important role in TW formation. These findings may provide important insights into wood formation at the molecular level. [ABSTRACT FROM AUTHOR]

Starch is the most important long-term reserve in trees, and the analysis of starch is therefore useful source of physiological information. Currently published protocols for wood starch analysis impose several limitations, such as long procedures and a neutralization step. The high-throughput standard protocols for starch analysis in food and feed represent a valuable alternative. However, they have not been optimised or tested with woody samples. These have particular chemical and structural characteristics, including the presence of interfering secondary metabolites, low reactivity of starch, and low starch content. In this study, a standard method for starch analysis used for food and feed (AOAC standard method 996.11) was optimised to improve precision and accuracy for the analysis of starch in wood. Key modifications were introduced in the digestion conditions and in the glucose assay. The optimised protocol was then evaluated through 430 starch analyses of standards at known starch content, matrix polysaccharides, and wood collected from three organs (roots, twigs, mature wood) of four species (coniferous and flowering plants). The optimised protocol proved to be remarkably precise and accurate (3%), suitable for a high throughput routine analysis (35 samples a day) of specimens with a starch content between 40 mg and 21 µg. Samples may include lignified organs of coniferous and flowering plants and non-lignified organs, such as leaves, fruits and rhizomes. [ABSTRACT FROM AUTHOR]

Wood is mainly composed of secondary walls, which constitute the most abundant stored carbon produced by vascular plants. Understanding the molecular mechanisms controlling secondary wall deposition during wood formation is not only an important issue in plant biology but also critical for providing molecular tools to custom-design wood composition suited for diverse end uses. Past molecular and genetic studies have revealed a transcriptional network encompassing a group of wood-associated NAC and MYB transcription factors that are involved in the regulation of the secondary wall biosynthetic program during wood formation in poplar trees. Here, we report the functional characterization of poplar orthologs of MYB46 and MYB83 that are known to be master switches of secondary wall biosynthesis in Arabidopsis. In addition to the two previously-described PtrMYB3 and PtrMYB20, two other MYBs, PtrMYB2 and PtrMYB21, were shown to be MYB46/MYB83 orthologs by complementation and overexpression studies in Arabidopsis. The functional roles of these PtrMYBs in regulating secondary wall biosynthesis were further demonstrated in transgenic poplar plants showing an ectopic deposition of secondary walls in PtrMYB overexpressors and a reduction of secondary wall thickening in their dominant repressors. Furthermore, PtrMYB2/3/20/21 together with two other tree MYBs, the Eucalyptus EgMYB2 and the pine PtMYB4, were shown to differentially bind to and activate the eight variants of the 7-bp SMRE consensus sequence, composed of ACC(A/T)A(A/C)(T/C). Together, our results indicate that the tree MYBs, PtrMYB2/3/20/21, EgMYB2 and PtMYB4, are master transcriptional switches that activate the SMRE sites in the promoters of target genes and thereby regulate secondary wall biosynthesis during wood formation. [ABSTRACT FROM AUTHOR]

Wood from biomass plantations with fast growing tree species such as poplars can be used as an alternative feedstock for production of biofuels. To facilitate utilization of lignocellulose for saccharification, transgenic poplars with modified or reduced lignin contents may be useful. However, the potential impact of poplars modified in the lignification pathway on ectomycorrhizal (EM) fungi, which play important roles for plant nutrition, is not known. The goal of this study was to investigate EM colonization and community composition in relation to biomass and nutrient status in wildtype (WT, Populus tremula × Populus alba) and transgenic poplar lines with suppressed activities of cinnamyl alcohol dehydrogenase, caffeate/5-hydroxyferulate O-methyltransferase, and cinnamoyl-CoA reductase in a biomass plantation. In different one-year-old poplar lines EM colonization varied from 58% to 86%, but the EM community composition of WT and transgenic poplars were indistinguishable. After two years, the colonization rate of all lines was increased to about 100%, but separation of EM communities between distinct transgenic poplar genotypes was observed. The differentiation of the EM assemblages was similar to that found between different genotypes of commercial clones of Populus × euramericana. The transgenic poplars exhibited significant growth and nutrient element differences in wood, with generally higher nutrient accumulation in stems of genotypes with lower than in those with higher biomass. A general linear mixed model simulated biomass of one-year-old poplar stems with high accuracy (adjusted R2 = 97%) by two factors: EM colonization and inverse wood N concentration. These results imply a link between N allocation and EM colonization, which may be crucial for wood production in the establishment phase of poplar biomass plantations. Our data further support that multiple poplar genotypes regardless whether generated by transgenic approaches or conventional breeding increase the variation in EM community composition in biomass plantations. [ABSTRACT FROM AUTHOR]

With the completion of the Populus trichocarpa genome sequence and the development of various genetic genomic and biochemical tools, Populus now offers many possibilities to study questions that cannot be as easily addressed in Arabidopsis and rice, the two prime model systems of plant biology and genomics. Tree-specific traits such as wood formation, long-term perennial growth, and seasonality are obvious areas of research, but research in other areas such as control of flowering, biotic interactions, and evolution of adaptive traits is enriched by adding a tree to the suite of model systems. Furthermore, the reproductive biology of Populus (a dioeceous wind-pollinated long-lived tree) offers both new possibilities and challenges in the study and analysis of natural genetic and phenotypic variation. The relatively close phylogenetic relationship of Populus to Arabidopsis in the Furosid clads Eudicotyledonous plants aids in comparative functional studies on genome and gene family evolution in eudicots. [ABSTRACT FROM AUTHOR]

Mass mortality of oak trees has been occurring in Japan since the late 1980s. The fungus Raffaelea quercivora has been frequently isolated from discoloured sapwood in dead or wilting trees and inoculation experiments have shown it to be capable of causing wilting and xylem discoloration in several oak species, notably Quercus crispula and Q. serrata. In this study, we inoculated seedlings of six Fagaceae species with R. quercivora and, after 56 days, measured the vertical length of the discoloration and the areas of discoloured and non-conducting sapwood on stem cross-sections. The sapwood discoloration and the water non-conduction areas were larger in Q. crispula and Q. serrata than in the other species. [ABSTRACT FROM AUTHOR]

As part of a habitat restoration experiment wood substrates (red gum) were introduced to two lowland streams of SE Australia in which habitat has been severely degraded by deposition of sand eroded from higher in the catchment. We monitored net primary production (NPP) and community respiration (CR), nutrient concentrations and the succession of algae and invertebrates (abundance and species richness), sampling at 2, 4, 8, 12, 16 and 20 weeks. Colonisation by algae was rapid, and there were distinct changes in the assemblages over the first 4 weeks. Thereafter, changes were much less marked. There were also differences in nutrient concentrations and some measures of algal abundance between the two creeks. As with the algae, invertebrates colonised these substrates extremely rapidly, peaking in abundance and richness in week 8. Invertebrate abundances closely tracked changes in the abundance of algae. By the end of the study both algal and invertebrate communities were in apparent decline, with sharp decreases in invertebrate and algal abundance and invertebrate species richness. Rates of GPP also declined toward the end of the experiment, and this coincided with the detachment of large mats of filamentous algae and the recession of flows over the summer months. However, in both streams the added timber quickly created habitat with high levels of primary production in an otherwise strongly heterotrophic stream system. These hotspots of autotrophic production were quickly colonised by high numbers of macroinvertebrates indicating timber addition may provide an effective means of augmenting habitat for algae and invertebrates in sanded streams. [ABSTRACT FROM AUTHOR]

The drying of wet materials induces a number of physico-chemical changes in the product, often reflected in colour. For dried products sold on appearance, like certain grades of wood, the extent of colour development is highly significant in terms of the material's end-use. Until recently, colour was normally assessed by eye, but the availability of convenient spectrophotometers has provided industrial users with a means of quantitative description of colour. Examples from wood technology include assessing the impact of biological surface treatment, the impact of ultraviolet radiation, and screening of drying schedules by evaluating kiln brown-stain development. In other applications, the depth of colour might be used for the screening of drying schedules as an adjunct to other tests for stress development, or to pinpoint reaction and knotty wood in boards by an online scanner. [ABSTRACT FROM AUTHOR]

The changing levels of carbohydrates and the rates of photosynthesis in rooting Populus cuttings are described. The cuttings were planted in a sand medium, in controlled environment conditions. There was no evidence to support the view that failure to root in P. tremula was caused by insufficient carbohydrate reserves. In leafless hardwood cuttings, the carbohydrate levels were initially very high (14–19%) but fell rapidly (to 5–10%) as roots, callus or shoots developed. In leafy softwood cuttings, a steady accumulation of carbohydrate reserves was observed, rising from 5–10% on planting to 15–25% when roots had developed. One of the differences between the easy‐to‐root P. × euramericana and the hard‐to‐root P. tremula was the apparent downward transport of assimilates in P. × euramericana softwood cuttings. [ABSTRACT FROM AUTHOR]