1. Characterization of recombinant HIV-1 Tat and its interaction with TAR RNA
- Author
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Bogda Wegrzynski, Carlo Nalin, Ming Chu Hsu, Lee W. Slice, Eileen Codner, Douglas Antelman, Maureen Holly, Jin Wang, and Voldemar Toome
- Subjects
Transcriptional Activation ,Circular dichroism ,Protein Folding ,Biology ,Biochemistry ,law.invention ,Cell Line ,Tar (tobacco residue) ,law ,Gene expression ,Escherichia coli ,Humans ,Cloning, Molecular ,HIV Long Terminal Repeat ,RNA ,Molecular biology ,Recombinant Proteins ,Dissociation constant ,Chaotropic agent ,Cross-Linking Reagents ,Regulatory sequence ,Gene Products, tat ,Biophysics ,Recombinant DNA ,RNA, Viral ,Electrophoresis, Polyacrylamide Gel ,Protein Binding - Abstract
Recombinant HIV-1 Tat (Tat 1-86) has been purified from the cytoplasmic fraction of Escherichia coli without the use of protein denaturants or chaotropic agents. Chloroquine-mediated uptake of the purified protein into cells resulted in transactivation of the HIV LTR promoter. Tat retains 1.64 mol of Zn2+/mol of protein by atomic absorption spectroscopy. Circular dichroism measurements indicated that the structure of recombinant Tat contains 15-20% alpha-helix. Filter binding assays showed that Tat binds to a 63-nucleotide target TAR RNA with a dissociation constant (Kd) of 10 nM at 25 degrees C, 0.05 M ionic strength, pH 7.5, in a 1:1 Tat-TAR RNA stoichiometry. Nonelectrostatic interactions provide the principal source of free energy of association. While the pH optimum occurs over a wide H+ concentration, the salt dependence of Kd indicates formation of a single ion pair. UV-induced protein-RNA cross-linking produced a labeled Tat-TAR RNA adduct, indicating that direct contact occurred between the Tat protein and TAR RNA.
- Published
- 1992