34 results on '"Svetlana Pavlova"'
Search Results
2. A never-ending story of the common shrew: searching for the origin
- Author
-
Vladimir S. Lebedev, Alexander V. Kouptsov, Boris Kryštufek, Svetlana Pavlova, Natalia A. Illarionova, Anna A. Bannikova, Alexandra A. Raspopova, and Boris I. Sheftel
- Subjects
Most recent common ancestor ,biology ,Range (biology) ,Sorex ,Common shrew ,biology.organism_classification ,Haplogroup ,Maximum parsimony ,Geography ,Refugium (population biology) ,Evolutionary biology ,Animal ecology ,Animal Science and Zoology ,Ecology, Evolution, Behavior and Systematics - Abstract
A range-wide phylogeographic study of the common shrew Sorex araneus was performed using the concatenation of cytb and ND2 mitochondrial genes. The data support two major lineages, one of which (European haplogroup) is distributed continuously from West Europe to West Siberia; the other (Siberian haplogroup) is found in two non-adjacent areas: in central Siberia and in southern Finland and Karelia. Several smaller subclades (East European, Balkan, and West Siberian) were identified within the European lineage. Ancestral area reconstructions were performed under the maximum parsimony criterion using the algorithm that was designed to analyze landmark data. The results suggest that the last common ancestor of the common shrew inhabited the Balkans or the Danubian-Carpathian area. The results of demographic analyses are consistent with the hypothesis of recent expansion throughout the entire distribution range. The genetic diversity indices and the expansion time estimates were higher in the western part of the range. Cumulatively, these findings support the hypothesis that during the Last Glacial Maximum, the range of the common shrew was restricted to a single refugium in Southeastern Europe.
- Published
- 2020
- Full Text
- View/download PDF
3. Who are you, Griselda? A replacement name for a new genus of the Asiatic short-tailed shrews (Mammalia, Eulipotyphla, Soricidae): molecular and morphological analyses with the discussion of tribal affinities
- Author
-
Anna A. Bannikova, Evgeniya N. Solovyeva, Boris I. Sheftel, Vladimir S. Lebedev, Alexei V. Abramov, Paulina D. Jenkins, Sergey A. Simanovsky, T. B. Demidova, Svetlana Pavlova, Love Dalén, and Yun Fang
- Subjects
0106 biological sciences ,0301 basic medicine ,Asia ,Blarinellini ,Zoology ,Parablarinella ,010603 evolutionary biology ,01 natural sciences ,03 medical and health sciences ,karyotypic variation ,Genus ,Systematics ,Soricomorpha ,biology.animal ,lcsh:Zoology ,Animalia ,lcsh:QL1-991 ,Chordata ,Clade ,molecular phylogeny ,Ecology, Evolution, Behavior and Systematics ,biology ,Cenozoic ,Shrew ,Holotype ,Blarinini ,biology.organism_classification ,Affinities ,030104 developmental biology ,Blarinella griselda ,Mammalia ,Molecular phylogenetics ,Animal Science and Zoology ,Type specimen ,Soricidae ,Research Article - Abstract
The first genetic study of the holotype of the Gansu short-tailed shrew, Blarinella griselda Thomas, 1912, is presented. The mitochondrial analysis demonstrated that the type specimen of B. griselda is close to several recently collected specimens from southern Gansu, northern Sichuan and Shaanxi, which are highly distinct from the two species of Asiatic short-tailed shrews of southern Sichuan, Yunnan, and Vietnam, B. quadraticauda and B. wardi. Our analysis of four nuclear genes supported the placement of B. griselda as sister to B. quadraticauda / B. wardi, with the level of divergence between these two clades corresponding to that among genera of Soricinae. A new generic name, Parablarinella, is proposed for the Gansu short-tailed shrew. Karyotypes of Parablarinella griselda (2n = 49, NFa = 50) and B. quadraticauda (2n = 49, NFa = 62) from southern Gansu are described. The tribal affinities of Blarinellini and Blarinini are discussed.
- Published
- 2019
- Full Text
- View/download PDF
4. Role of Population Structuring in the Formation of Karyotypic Diversity of the Common Shrew Sorex araneus (Lipotyphla, Mammalia)
- Author
-
N. A. Shchipanov and Svetlana Pavlova
- Subjects
Araneus ,0303 health sciences ,education.field_of_study ,biology ,030302 biochemistry & molecular biology ,Population ,Small population size ,04 agricultural and veterinary sciences ,Sorex ,Parapatric speciation ,Common shrew ,biology.organism_classification ,03 medical and health sciences ,Evolutionary biology ,040103 agronomy & agriculture ,0401 agriculture, forestry, and fisheries ,Biological dispersal ,Evolutionary ecology ,education ,Ecology, Evolution, Behavior and Systematics - Abstract
In this review, we describe karyotypic, morphological, and genetic structuring of population in the common shrew Sorex araneus (Lipotyphla, Mammalia), and try to explain some unclear and contradictory aspects of this structuring on the basis of population approach. The subdivision of this species into more than 76 parapatric chromosomal races does not correspond to its morphological and genetic structuring. Chromosomal hybrid zones are formed in the areas of contact between the races. The frequency of interracial F1 hybrids is low in nature, but we have shown that mating between different races in captivity occurs quite readily, although the postnatal survival of hybrids is reduced. We suggest that this species is subdivided into relatively small populations characterized by the unity of functioning, which is ensured by the predominant dispersal of individuals from each of the populations within their population space. It should also be emphasized that the main provisions set forth by Stanislav S. Shvarts in his conceptual monograph The Evolutionary Ecology of Animals are still relevant today.
- Published
- 2019
- Full Text
- View/download PDF
5. Karyotypic and molecular evidence supports the endemic Tibetan hamsters as a separate divergent lineage of Cricetinae
- Author
-
Vladimir S. Lebedev, Alexander S. Graphodatsky, Natalia Yu. Feoktistova, Alexey Surov, Sun Yuehua, Anna A. Bannikova, Svetlana Pavlova, Natalia A. Serdyukova, Svetlana A. Romanenko, and Qu Jiapeng
- Subjects
0106 biological sciences ,0301 basic medicine ,Male ,medicine.medical_specialty ,Lineage (evolution) ,Science ,Evolutionary biology ,Biology ,010603 evolutionary biology ,01 natural sciences ,Article ,03 medical and health sciences ,Cytogenetics ,Species Specificity ,Genus ,Cricetinae ,medicine ,Animals ,Phylogeny ,Comparative genomics ,Multidisciplinary ,Phylogenetic tree ,Karyotype ,biology.organism_classification ,Chromosome Banding ,Phodopus ,030104 developmental biology ,Sister group ,Karyotyping ,Medicine ,Female - Abstract
The genus status of Urocricetus was defined recently based on morphological and molecular data. Even though the amount of evidence for a separate phylogenetic position of this genus among Cricetinae continues to increase, there is still no consensus on its relationship to other groups. Here we give the first comprehensive description of the U. kamensis karyotype (2n = 30, NFa = 50) including results of comparative cytogenetic analysis and detailed examination of its phylogenetic position by means of numerous molecular markers. The molecular data strongly indicated that Urocricetus is a distant sister group to Phodopus. Comparative cytogenetic data showed significant reorganization of the U. kamensis karyotype compared to karyotypes of all other hamsters investigated earlier. The totality of findings undoubtedly means that Urocricetus belongs to a separate divergent lineage of Cricetinae.
- Published
- 2021
6. New karyotypes of the common shrew Sorex araneus (Lipotyphla, Mammalia) at the northern periphery of the species range in European Russia
- Author
-
N. A. Shchipanov and Svetlana Pavlova
- Subjects
Araneus ,education.field_of_study ,biology ,Range (biology) ,Population ,Zoology ,Karyotype ,Sorex ,Common shrew ,biology.organism_classification ,Race (biology) ,Animal ecology ,Animal Science and Zoology ,education ,Ecology, Evolution, Behavior and Systematics - Abstract
The karyotypic diversity of the common shrew was examined in a poorly studied area of northeastern European Russia between the estuary of the Pechora River and the North Ural Mountains. The karyotypes that belonged to the Serov chromosomal race were found at 500 km to the north from the previously known race range limit. In addition, three new homozygous karyotypic variants were detected in the vicinities of the towns of Inta and Naryan-Mar (near and above the Arctic Circle, respectively). An individual with the diagnostic metacentrics go, hn, im, kq, and pr—termed the “Inta” variant—could have originated from a single whole-arm reciprocal translocation (WART) from the karyotype of the Sok race. This variant corresponds to the predicted karyotype that links the Petchora and Sok races. The second variant had the metacentrics go, hn, im, kr, and pq (Naryan-Mar) and could have arisen from the “Inta” variant by a single WART. An unusual karyotype that was found on the left bank of the Pechora River was determined to be a recombinant that resulted from natural hybridization between the Petchora race and new “Naryan-Mar” variant. Thus, we have determined the origin of new karyotypic variants in a small local hybrid population.
- Published
- 2018
- Full Text
- View/download PDF
7. First cytogenetic analysis of lesser gymnures (Mammalia, Galericidae, Hylomys) from Vietnam
- Author
-
Natalya A. Lemskaya, Alexei V. Abramov, Svetlana Pavlova, A.V. Shchinov, Viatcheslav V. Rozhnov, Larisa S. Biltueva, and Svetlana A. Romanenko
- Subjects
0106 biological sciences ,0301 basic medicine ,Placentalia ,Asia ,lcsh:QH426-470 ,Heterochromatin ,Plant Science ,Hylomys ,Y chromosome ,Echinoneoida ,010603 evolutionary biology ,01 natural sciences ,Giemsa stain ,03 medical and health sciences ,insectivorous mammals ,FISH ,Galeritidae ,Centromere ,Genetics ,Animalia ,Chordata ,X chromosome ,telomeric sequence ,Vertebrata ,cell culture ,Autosome ,biology ,Conuloidea ,Karyosystematics ,Echinoidea ,Erinaceidae ,Karyotype ,biology.organism_classification ,cryoconservation ,karyotype ,lcsh:Genetics ,030104 developmental biology ,Vietnam ,Evolutionary biology ,Theria ,Mammalia ,Animal Science and Zoology ,Erinaceomorpha ,Echinodermata ,Biotechnology ,Research Article - Abstract
Gymnures are an ancient group of small insectivorous mammals and are characterized by a controversial taxonomic status and the lack of a description of karyotypes for certain species. In this study, conventional cytogenetic techniques (Giemsa, CBG- and GTG-banding, Ag-NOR), CMA3-DAPI staining, and fluorescent in situ hybridization (FISH) with telomeric DNA probes were used to examine for the first time the karyotypes of lesser gymnures of group Hylomyssuillus Müller, 1840 from northern and southern Vietnam. All studied specimens had karyotypes with 2n=48, NFa=64. C-positive heterochromatic blocks existed in centromeric regions of 7 bi-armed autosomes and the submetacentric X chromosome. The Y chromosome is a C-positive and dot-like. The nucleolus organizer regions resided terminally on the short arms of 2 small bi-armed pairs. Positive signals at the telomeres of all chromosomes were revealed by FISH. CMA3-positive blocks were localized on the telomeric and pericentric regions of most bi-armed and acrocentric chromosomes. Despite the large genetic distances between Hylomys Müller, 1840, lesser gymnures from H.suillus-group from northern and southern Vietnam have similar karyotypic characteristics.
- Published
- 2018
8. Density-dependent processes determine the distribution of chromosomal races of the common shrew Sorex araneus (Lipotyphla, Mammalia)
- Author
-
Svetlana Pavlova and N. A. Shchipanov
- Subjects
0106 biological sciences ,Araneus ,biology ,Ecology ,Range (biology) ,Zoology ,Common shrew ,Parapatric speciation ,Sorex ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Latitude ,010601 ecology ,Race (biology) ,Animal ecology ,Animal Science and Zoology ,Ecology, Evolution, Behavior and Systematics - Abstract
The common shrew is subdivided into 74 chromosomal races, widely distributed in the postglacial area from the Britain Islands to Lake Baikal. Based on 1969 karyotypes from 216 localities, we present for the first time a map of ranges of 25 chromosomal races (except the Altai race) currently known in Russia. We revealed two centers of high karyotypic diversity: the western (near Baltic Sea) and the eastern (near Baikal Lake). The studied races were categorized as small-, medium-, and large-range races, and small-range races concentrated around those two centers of karyotypic diversity. We did not find any significant association between race range size and ecological zone, latitude, or the ambient temperature. Physical barriers, such as Ural Mountain or rivers, do not limit race distribution. The width of rivers that divide a range of a single race or ranges of two different races does not differ. We supposed that the occupation of an area by a race could limit the invasion of a different race from an adjacent area and expansion of its range, thus contributing to race parapatric distribution alone without additional effects of physical barriers. Based on karyotype similarity and geographic localization, we combined races into four “karyotypic chains,” in which the races can be derived from one another consequently by a single chromosomal translocation. The present distribution of the common shrew races in Russia supports the idea that it has resulted from recolonization from refugia governed by the density-dependent processes.
- Published
- 2017
- Full Text
- View/download PDF
9. Meiosis and Fertility Associated with Chromosomal Heterozygosity
- Author
-
Stanisław Fedyk, Pavel M. Borodin, Anna A. Torgasheva, Svetlana Pavlova, Jeremy B. Searle, and Włodzimierz Chętnicki
- Subjects
Loss of heterozygosity ,Genetics ,Meiosis ,media_common.quotation_subject ,Fertility ,Biology ,media_common - Published
- 2019
- Full Text
- View/download PDF
10. Chromosomal Differentiation in the Common Shrew and Related Species
- Author
-
Nina Bulatova, Svetlana Pavlova, Larisa S. Biltueva, Jan Zima, and Natalia S. Zhdanova
- Subjects
Evolutionary biology ,Biology ,Common shrew ,biology.organism_classification - Published
- 2019
- Full Text
- View/download PDF
11. Chromosomal Hybrid Zones
- Author
-
Stanisław Fedyk, Svetlana Pavlova, Włodzimierz Chętnicki, and Jeremy B. Searle
- Subjects
Genetics ,Biology - Published
- 2019
- Full Text
- View/download PDF
12. Multilevel subdivision in the araneus species group of the genus Sorex: 1. Chromosomal differentiation
- Author
-
N. A. Shchipanov and Svetlana Pavlova
- Subjects
0106 biological sciences ,0301 basic medicine ,Araneus ,education.field_of_study ,business.industry ,Population ,Zoology ,Karyotype ,Biology ,Sorex ,Common shrew ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,General Biochemistry, Genetics and Molecular Biology ,Intraspecific competition ,03 medical and health sciences ,030104 developmental biology ,Genus ,General Agricultural and Biological Sciences ,education ,business ,Subdivision - Abstract
This review summarizes the available data on multilevel differentiation in the araneus species group of the genus Sorex (Eulipotyphla, Mammalia). Communication 1 gives basic information about the biology and morphological and karyotypic differentiation of some species belonging to this genus, as well as about the subdivision of one of the species, the common shrew (Sorex araneus), into intraspecific chromosomal races. The list of the 75 races known so far is included (26 of them dwell in Russia).
- Published
- 2016
- Full Text
- View/download PDF
13. Evolutionary and taxonomic differentiation of shrew species in the 'araneus' group of the genus Sorex: 2. Subdivision within the common shrew
- Author
-
N. A. Shchipanov and Svetlana Pavlova
- Subjects
0301 basic medicine ,Araneus ,education.field_of_study ,Genus Sorex ,biology ,Shrew ,Population ,Zoology ,Sorex ,Common shrew ,biology.organism_classification ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,030104 developmental biology ,biology.animal ,General Agricultural and Biological Sciences ,education - Abstract
This review summarizes available data on the problem of taxonomic and evolutionary differentiation in the “araneus” groups of species of the genus Sorex (Eulipotyphla, Mammalia). Report 2 describes the hierarchical structuring, population system, and interracial hybrid zones in the common shrew (Sorex araneus).
- Published
- 2016
- Full Text
- View/download PDF
14. 2. Chromosomes and speciation in mammals
- Author
-
Jeremy B. Searle and Svetlana Pavlova
- Subjects
Evolutionary biology ,Genetic algorithm ,Biology - Published
- 2018
- Full Text
- View/download PDF
15. 'European' race-specific metacentrics in East Siberian common shrews (Sorex araneus): a description of two new chromosomal races, Irkutsk and Zima
- Author
-
Boris I. Sheftel, Svetlana Pavlova, Sergei A. Borisov, and Alexander F. Timoshenko
- Subjects
0106 biological sciences ,Araneus ,lcsh:QH426-470 ,Robertsonian translocation ,Zoology ,Plant Science ,Sorex ,medicine.disease_cause ,010603 evolutionary biology ,01 natural sciences ,chromosomal race ,Race (biology) ,Polymorphism (computer science) ,Soricomorpha ,Eastern Siberia ,Genetics ,medicine ,Animalia ,Chordata ,araneus ,Sorex araneus ,Autosome ,biology ,Chromosome ,Karyotype ,biology.organism_classification ,010601 ecology ,karyotype ,lcsh:Genetics ,Mammalia ,Animal Science and Zoology ,Soricidae ,Biotechnology - Abstract
Karyotype studies of common shrews in the vicinity of Lake Baikal (Irkutsk Region, Eastern Siberia) resulted in the description of two new chromosomal races of Sorex araneus Linnaeus, 1758 (Lypotyphla, Mammalia), additional to 5 races formerly found in Siberia. In the karyotypes of 12 specimens from 3 locations, the polymorphism of metacentric and acrocentric chromosomes of the Robertsonian type was recorded and two distinct groups of karyotypes interpreted as the chromosomal races were revealed. They are geographically distant and described under the racial names Irkutsk (Ir) and Zima (Zi). Karyotypes of both races were characterized by species-specific (the same for all 74 races known so far) metacentric autosomes af, bc, tu and jl, and the typical sex chromosome system – XX/XY1Y2. The race-specific arm chromosome combinations include three metacentrics and four acrocentrics in the Irkutsk race (gk, hi, nq, m, o, p, r) and four metacentrics and two acrocentrics in the Zima race (gm, hi, ko, nq, p, r). Within the races, individuals with polymorphic chromosomes were detected (g/m, k/o, n/q, p/r). The presence of the specific metacentric gk allowed us to include the Irkutsk race into the Siberian Karyotypic Group (SKG), distributed in surrounding regions. The Zima race karyotype contained two metacentrics, gm and ko, which have been never found in the Siberian part of the species range, but appear as the common feature of chromosomal races belonging to the West European Karyotypic Group (WEKG). Moreover, the metacentrics of that karyotype are almost identical to the Åkarp race (except the heterozygous pair p/r) locally found in the southern Sweden. One of two Siberian races described here for the first time, the Zima race, occurs in an area considerably distant from Europe and shares the common metacentrics (gm, hi, ko) with races included in WEKG. This fact may support a hypothesis of independent formation of identical arm chromosome combinations due to occurrence of the same centric fusions in different parts of the species range.
- Published
- 2017
16. The Microtus voles: Resolving the phylogeny of one of the most speciose mammalian genera using genomics
- Author
-
Jeremy B. Searle, Soraia Barbosa, Svetlana Pavlova, Paulo C. Alves, and Joana Paupério
- Subjects
0106 biological sciences ,0301 basic medicine ,010603 evolutionary biology ,01 natural sciences ,DNA, Mitochondrial ,03 medical and health sciences ,Holarctic ,Genus ,Phylogenetics ,Adaptive radiation ,Genetics ,Animals ,Microtus ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,Phylogeny ,Cell Nucleus ,Genome ,Phylogenetic tree ,biology ,Arvicolinae ,Genomics ,biology.organism_classification ,Genetic divergence ,030104 developmental biology ,Sister group ,Evolutionary biology - Abstract
Sequential rapid radiations pose some of the greatest difficulties in phylogenetics, especially when analysing only a small number of genetic markers. Given that most of the speciation events occur in quick succession at various points in time, this creates particular challenges in determining phylogenetic relationships, i.e. branching order and divergence times. With the development of high throughput sequencing, thousands of markers can now readily be used to tackle these issues. Microtus is a speciose genus currently composed of 65 species that evolved over the last 2 million years. Although it is a well-studied group, there is still phylogenetic uncertainty at various divergence levels. Building upon previous studies that generally used small numbers of mitochondrial and/or nuclear loci, in this genomic-scale study we used both mitochondrial and nuclear data to study the rapid radiation within Microtus, using partial mitogenomes and genotyping-by-sequencing (GBS) on seven species representing five Microtus subgenera and the main biogeographic ranges where this group occurs. Both types of genome (mitochondrial and nuclear) generated similar tree topologies, with a basal split of the Nearctic (M. ochrogaster) and Holarctic (M. oeconomus) species, and then a subdivision of the five Palearctic species into two subgroups. These data support the occurrence of two European radiations, one North American radiation, and a later expansion of M. oeconomus from Asia to both Europe and North America. We further resolved the positioning of M. cabrerae as sister group of M. agrestis and refute the claim that M. cabrerae should be elevated to its own genus (Iberomys). Finally, the data support ongoing speciation events, especially within M. agrestis, with high levels of genetic divergence between the three Evolutionarily Significant Units (ESUs) previously identified. Similar high levels of divergence were also found among ESUs within M. oeconomus and M. arvalis.
- Published
- 2017
17. Pubertal period influence on sports results among 13-14 year-old boys swimmers
- Author
-
Alexander Dorontsev, Victoria Pavlovna Gladenkova, Olga Yuzhikova, Svetlana Pavlova, and Elena Kashirskaya
- Subjects
Environmental Engineering ,lcsh:QP1-981 ,biology ,Athletes ,lcsh:QR1-502 ,030209 endocrinology & metabolism ,030229 sport sciences ,biology.organism_classification ,lcsh:Microbiology ,lcsh:Physiology ,Industrial and Manufacturing Engineering ,Pearson product-moment correlation coefficient ,03 medical and health sciences ,symbols.namesake ,0302 clinical medicine ,Standard error ,lcsh:Zoology ,Correlation analysis ,symbols ,Prognostic model ,lcsh:QL1-991 ,Period (music) ,Demography - Abstract
The aim of this research work was to reveal specific peculiarities of young swimmers training, taking into account their pubescence in terms of the long-term training concept. During the research it was defined that methodological support of spots training for a long-term period should contain not only prognostic model of prospective results achievement. It also should analyze individual peculiarities of pubertal period. During the research we used the official results of competitions protocols, the results of general and special physical readiness tests, resume of the leading swimming coaches. For statistical data handling we used quantitative variables, presented in a form ± of a standard error of the mean value (М ± m). The results were considered as statistically significant in terms of р < 0,05. Correlation analysis is realized using Pearson correlation coefficient. The held research helped to define typical characteristics of pubertal period in teen-agers swimmers, timely correct the training process. It was stated that athletes adaptation to the training and competitive loads in pubertal period was characterized by different degree of sports results increase and correlated with the intensity of hormonal changes. The boys with distinct features of pubertal period were the leaders at short distances, but showed coordinating abilities decrease. The athletes, whose somatic-gender changes didn’t have extreme indices or had prolonged duration, showed stable sports results increase mainly at long distances.
- Published
- 2020
- Full Text
- View/download PDF
18. A hybrid zone between the Kirillov and Petchora chromosomal races of the common shrew (Sorex araneus L., 1758) in northeastern European Russia: a preliminary description
- Author
-
N. A. Shchipanov and Svetlana Pavlova
- Subjects
Araneus ,Ecology ,Shrew ,Cline (biology) ,Biology ,Common shrew ,Sorex ,biology.organism_classification ,Hybrid zone ,Animal ecology ,Evolutionary biology ,biology.animal ,Animal Science and Zoology ,Ecology, Evolution, Behavior and Systematics ,Hybrid - Abstract
Karyotypes of the Petchora and Kirillov chromosomal races of the common shrew differ by six Robertsonian metacentrics with monobrachial homology, such that interracial F1 hybrids produce a ring-of-six configuration at meiosis I and are expected to suffer infertility. Mapping of 52 karyotyped individuals by using a unique global positioning system (GPS) revealed that the Kirillov-Petchora hybrid zone is positioned close to the river Mezen, which separated these races, and so may limit the migration of shrews across the contact zone. Although the population density of shrews was found to be markedly different with respect to habitats, the zone runs through a mosaic of habitats that are similar for both the Petchora and the Kirillov sides. This is one of the narrowest chromosomal hybrid zones among those studied in Sorex araneus with a standard cline width of about 1 km. The center of the cline is located on a bank occupied by the Petchora race at a distance of 0.4 km away from a riverine barrier. Interestingly, both the Kirillov race and hybrid individuals were found on a small island in the middle of a river fully flooded each spring. The frequencies of karyotypic variants allow us to consider the zone as an example of a bimodal zone. New Robertsonian and de novo whole-arm reciprocal translocations (WART) chromosomal variants found in the zone could be regarded as evidences of current evolutionary process in chromosomal hybrid zones.
- Published
- 2014
- Full Text
- View/download PDF
19. Small mammals at the southeast of Tver oblast. Brief note 2. Diversity, population density and biomass
- Author
-
Ph. A. Tumasyan, A. A. Raspopova, V. Yu. Oleinichenko, D. Yu. Aleksandrov, N. A. Shchipanov, A. A. Kalinin, T. B. Demidova, Svetlana Pavlova, M. G. Lyapina, and A. V. Kouptsov
- Subjects
Biomass (ecology) ,education.field_of_study ,Disturbance (ecology) ,Habitat ,Deforestation ,Ecology ,Fauna ,Population ,Biodiversity ,Biology ,education ,Population density ,General Environmental Science - Abstract
The analysis of biotic diversity using pictographs has shown various changes after long-term deforestation and under short-term disturbance of forest habitats. The biomass of small mammals was similar in all types of forest habitats; it was higher in meadows and dropped in the young (9-year) forest in the former field. The total biomass of settled and nonresident population has been considered. Though the numbers of species as well as the diversity structure vary, the biomass of settled population is similar in all types of forest habitats. Nonresident population contributes to general biomass the more the greater habitat is disturbed. The relevant sustainability of general biomass is considered in terms of biocenotic compensation. Biocenosis is regarded as a system having an inclination to “autonomous” functioning.
- Published
- 2012
- Full Text
- View/download PDF
20. Interracial and population variability of phenotypic (cranial) characters in the common shrew Sorex araneus L., 1758
- Author
-
Svetlana Pavlova, I. F. Kuprianova, N. A. Shchipanov, and A. V. Bobretsov
- Subjects
Araneus ,Ecology ,Microevolution ,Zoology ,Biology ,Common shrew ,Sorex ,biology.organism_classification ,Population variability ,Race (biology) ,Skull ,medicine.anatomical_structure ,Hybrid zone ,Genetics ,medicine - Abstract
Variability of the cranial properties of chromosomal races Serov, Manturovo and Petchora of the common shrew were studied. A consistent increase of scull size in the Serov race with moving from the plain to highlands and a skull size decrease from low to high latitudes was detected. Interpopulation variability among different races was shown to be comparable with interracial variability or to exceed it. This suggests microevolution at the level of local populations.
- Published
- 2011
- Full Text
- View/download PDF
21. Natural hybridization between extremely divergent chromosomal races of the common shrew (Sorex araneus, Soricidae, Soricomorpha): hybrid zone in European Russia
- Author
-
Nina Bulatova, Jeremy B. Searle, N. A. Shchipanov, Thomas A. White, R. M. Jones, and Svetlana Pavlova
- Subjects
Genetics ,Hybrid zone ,biology ,Meiosis ,Evolutionary biology ,Chromosome ,Reproductive isolation ,Cline (biology) ,Sorex ,Common shrew ,biology.organism_classification ,Ecology, Evolution, Behavior and Systematics ,Hybrid - Abstract
Chromosomal races of the common shrew differ in sets of metacentric chromosomes and on contact may produce hybrids with extraordinarily complex configurations at meiosis I that are associated with reduced fertility. There is an expectation that these may be some of the most extreme tension zones available for study and therefore are of interest as potential sites for reproductive isolation. Here, we analyse one of these zones, between the Novosibirsk race (characterized by metacentrics go, hn, ik, jl, mp and qr) and the Tomsk race (metacentrics gk, hi, jl and mn and acrocentrics o, p, q and r), which form hybrids with a chain-of-nine (CIX) and a chain-of-three (CIII) configuration at meiosis I. At the Novosibirsk-Tomsk hybrid zone, the CIX chromosomes form clines of 8.53 km standardized width on average, whereas the cline for the CIII chromosomes was 52.83 km wide. The difference in these cline widths fits with the difference in meiotic errors expected with the CIX and CIII configuration, and we produce estimates of selection against hybrids with these types of configurations, which we relate to dispersal and age of the hybrid zone. The hybrid zone is located at the isocline at 200 m altitude above sea level; this relationship between the races and altitude is suggested at both coarse and fine scales. This indicates adaptive differences between the races that may in turn have been promoted by the chromosome differences. Thus, the extreme chromosomal divergence between the Novosibirsk and Tomsk may be associated with genic differentiation, but it is still striking that, despite the large chromosomal differences, reproductive isolation between the Novosibirsk and Tomsk races has not occurred.
- Published
- 2010
- Full Text
- View/download PDF
22. Small mammals of the southeast Tver oblast. Communication 1. The fauna and biotopic distribution
- Author
-
T. B. Demidova, Ph. A. Tumasyan, M. G. Lyapina, A. A. Kalinin, A. A. Raspopova, D. Yu. Aleksandrov, V. Yu. Oleinichenko, N. A. Shchipanov, Svetlana Pavlova, and A. V. Kouptsov
- Subjects
Ecology ,Fauna ,Biodiversity ,Small mammal ,Biology ,Spatial distribution ,General Environmental Science - Abstract
The authors analyze the data of a 12-year monitoring of small mammal populations with live-catch cage traps, snap traps, and pitfall traps. Eighteen species were trapped. Biotopical distributions of the species are outlined. The study shows that snap-trapping and pitfall-trapping results are not in complete agreement. Capture-mark-recapture live-trapping results are consistent with averaged results obtained with snap traps and pitfalls, standardized to a unit of distance.
- Published
- 2010
- Full Text
- View/download PDF
23. Cytogenetic study of the parapatric contact zone between two 46-chromosomal forms of the common vole in European Russia
- Author
-
F. N. Golenishchev, Svetlana Pavlova, R. S. Nadzhafova, L. G. Emelyanova, Yu. M. Kovalskaya, L. A. Lavrechenko, N. Sh. Bulatova, and N. V. Bystrakova
- Subjects
Hybrid zone ,biology ,Sympatric speciation ,Range (biology) ,Ecology ,Genetics ,Allopatric speciation ,Zoology ,Vole ,Parapatric speciation ,Microtus ,biology.organism_classification ,Latitude - Abstract
Since the first description of sympatric sibling species and allopatric chromosomal forms of the common vole (Microtus arvalis group) in 1969, the search of their range boundaries has been continually going on up to the present time. Based on the cytogenetic material presented in the present study, the geographical distribution of two karyoforms (2n = 46: NF = 84 and NF = 72) was examined in 20 geographic localities of European Russia (within the interval between the longitude 34°–56° East and latitude 51°–61° North). The places of findings of two karyoforms, “arvalis” and “obscurus”, in Russia have been supplemented and were shown to be significantly closer; whereas the well-known distribution boundaries for the “obscurus” form were specified in the northern and southern parts of Russia. A direct evidence of parapatric distribution and hybrid zone formation between the “arvalis” and “obscurus” karyoforms was obtained, which suggests the possibility of studying the evolutionary relationships between two genomes in the Russian part of the group range under the natural experimental conditions—the hybrid zone at the boundary between the “arvalis” and “obscurus”.
- Published
- 2010
- Full Text
- View/download PDF
24. Distribution of two chromosome races of the common shrew (Sorex araneus L.) in the hybrid zone: Can a change of the dispersal mode maintain independent gene frequencies?
- Author
-
N. A. Shchipanov, Svetlana Pavlova, and N. Sh. Bulatova
- Subjects
education.field_of_study ,biology ,Ecology ,Population ,Common shrew ,Sorex ,biology.organism_classification ,Intraspecific competition ,Race (biology) ,Hybrid zone ,Chromosome (genetic algorithm) ,Evolutionary biology ,Genetics ,Biological dispersal ,education - Abstract
Combination of different dispersal modes may itself, without external obstacles, lead to the appearance of subdivided populations and maintain the existence of independent population systems. The common shrew, a mammal convenient for studying different levels of intraspecific differentiation, was the object of the study. Empirical data have been used for simulation taking into account the change of dispersal modes in the population area. The obtained results agree with empirical data on the distribution of races and hybrids in the hybrid zone of chromosome races Moscow and Seliger. Change of the dispersal mode may maintain independent population dynamics and, in the case of chromosome races, prevent the migration of parental individuals into the territory of the other race.
- Published
- 2008
- Full Text
- View/download PDF
25. New data on the geographic distribution of chromosome races of Sorex araneus (Soricidae, Eulipotyphla) in European Russia
- Author
-
Svetlana Pavlova, A.T. Volkova, Nina Bulatova, N. A. Shchipanov, A. V. Bobretsov, V. Yu. Oleinichenko, A. A. Kalinin, T. B. Demidova, Boris I. Sheftel, Jeremy B. Searle, Rena S. Nadjafova, A. V. Kouptsov, N. V. Bystrakova, and D. Yu. Aleksandrov
- Subjects
Geographic distribution ,Araneus ,Chromosome (genetic algorithm) ,biology ,Evolutionary biology ,Animal Science and Zoology ,Sorex ,biology.organism_classification ,Ecology, Evolution, Behavior and Systematics - Published
- 2007
- Full Text
- View/download PDF
26. Cytogenetic control of a hybrid zone between two Sorex araneus chromosome races before breeding season
- Author
-
N. A. Shchipanov, Svetlana Pavlova, and N. Sh. Bulatova
- Subjects
Genetics ,Hybrid zone ,Autosome ,biology ,Meiosis ,Homologous chromosome ,Chromosome ,Heterozygote advantage ,Sorex ,biology.organism_classification ,Hybrid - Abstract
Two chromosome races of common shrew, Moscow and Seliger, differ in the arm combination in 11 diagnostic chromosomes (Robertsonian metacentrics/acrocentrics). Homozygotes of both pure races, simple Robertsonian heterozygotes of Seliger race, and complex heterozygotes (F1 hybrids) were detected in the found earlier hybrid zone of these races, in the spring before the breeding season. The g/o heterozygote was first discovered in race Seliger, whose chromosome formula typically contains acrocentrics g and o. The m/q heterozygote was recorded for the second time. Meiosis was studied in 16 males representing five detected karyotypic categories. No abnormal in pairing of homologs in either sex trivalent common for the species (XY1Y2) or autosome trivalents (g/o and m/q) was detected at diakinesis-metaphase I. Two hybrids displayed a theoretically expected and unimpaired meiotic configuration in a form of a very long chain comprising 11 monobrachial homologs (g/gm/mq/qp/pr/rk/ki/ih/hn/no/o). The results are discussed in terms of hypotheses on fertility of complex heterozygotes and limited gene flow in hybrid zone.
- Published
- 2007
- Full Text
- View/download PDF
27. Intrachromosomal Rearrangements in Rodents from the Perspective of Comparative Region-Specific Painting
- Author
-
Polina L. Perelman, Roscoe Stanyon, Alexander S. Graphodatsky, Nina Bulatova, F. N. Golenishchev, Svetlana A. Romanenko, Natalya A. Serdyukova, and Svetlana Pavlova
- Subjects
0301 basic medicine ,comparative cytogenetics ,Subfamily ,lcsh:QH426-470 ,030105 genetics & heredity ,Alexandromys ,Article ,Molecular cytogenetics ,inversion ,03 medical and health sciences ,small mammals ,Centromere ,Genetics ,medicine ,centromere shift ,fluorescence in situ hybridization ,Genetics (clinical) ,Synteny ,medicine.diagnostic_test ,biology ,Chromosome ,Karyotype ,biology.organism_classification ,chromosome painting ,microdissection ,voles ,lcsh:Genetics ,030104 developmental biology ,Fluorescence in situ hybridization - Abstract
It has long been hypothesized that chromosomal rearrangements play a central role in different evolutionary processes, particularly in speciation and adaptation. Interchromosomal rearrangements have been extensively mapped using chromosome painting. However, intrachromosomal rearrangements have only been described using molecular cytogenetics in a limited number of mammals, including a few rodent species. This situation is unfortunate because intrachromosomal rearrangements are more abundant than interchromosomal rearrangements and probably contain essential phylogenomic information. Significant progress in the detection of intrachromosomal rearrangement is now possible, due to recent advances in molecular biology and bioinformatics. We investigated the level of intrachromosomal rearrangement in the Arvicolinae subfamily, a species-rich taxon characterized by very high rate of karyotype evolution. We made a set of region specific probes by microdissection for a single syntenic region represented by the p-arm of chromosome 1 of Alexandromys oeconomus, and hybridized the probes onto the chromosomes of four arvicolines (Microtus agrestis, Microtus arvalis, Myodes rutilus, and Dicrostonyx torquatus). These experiments allowed us to show the intrachromosomal rearrangements in the subfamily at a significantly higher level of resolution than previously described. We found a number of paracentric inversions in the karyotypes of M. agrestis and M. rutilus, as well as multiple inversions and a centromere shift in the karyotype of M. arvalis. We propose that during karyotype evolution, arvicolines underwent a significant number of complex intrachromosomal rearrangements that were not previously detected.
- Published
- 2017
- Full Text
- View/download PDF
28. Phenotypic variation across chromosomal hybrid zones of the Eurasian common shrew (Sorex araneus) indicates reduced gene flow
- Author
-
Jeremy B. Searle, Nina Bulatova, Andrei V. Polyakov, N. A. Shchipanov, Pavel M. Borodin, P. David Polly, Vadim B. Ilyashenko, Svetlana Pavlova, Thomas A. White, and Sergei S. Onischenko
- Subjects
Evolutionary Genetics ,Heredity ,Introgression ,Animal Evolution ,Speciation ,lcsh:Medicine ,Parapatric speciation ,Russia ,Gene flow ,lcsh:Science ,Genetics ,Multidisciplinary ,Ecology ,biology ,Organ Size ,Cline (biology) ,Europe ,Mammalogy ,Phenotype ,Cytogenetic Analysis ,Research Article ,Gene Flow ,Evolutionary Processes ,Genetic Speciation ,Allopatric speciation ,Sorex ,Chromosomes ,Cytogenetics ,Genetic drift ,Animals ,Biology ,Hybridization ,Hybrid ,Evolutionary Biology ,Population Biology ,Chimera ,Shrews ,Genetic Drift ,Skull ,lcsh:R ,Computational Biology ,biology.organism_classification ,Organismal Evolution ,Genetic divergence ,Evolutionary Ecology ,Evolutionary biology ,Hybridization, Genetic ,570 Life sciences ,lcsh:Q ,Population Ecology ,Animal Genetics ,Zoology ,Population Genetics - Abstract
Sorex araneus, the Common shrew, is a species with more than 70 karyotypic races, many of which form parapatric hybrid zones, making it a model for studying chromosomal speciation. Hybrids between races have reduced fitness, but microsatellite markers have demonstrated considerable gene flow between them, calling into question whether the chromosomal barriers actually do contribute to genetic divergence. We studied phenotypic clines across two hybrid zones with especially complex heterozygotes. Hybrids between the Novosibirsk and Tomsk races produce chains of nine and three chromosomes at meiosis, and hybrids between the Moscow and Seliger races produce chains of eleven. Our goal was to determine whether phenotypes show evidence of reduced gene flow at hybrid zones. We used maximum likelihood to fit tanh cline models to geometric shape data and found that phenotypic clines in skulls and mandibles across these zones had similar centers and widths as chromosomal clines. The amount of phenotypic differentiation across the zones is greater than expected if it were dissipating due to unrestricted gene flow given the amount of time since contact, but it is less than expected to have accumulated from drift during allopatric separation in glacial refugia. Only if heritability is very low, Ne very high, and the time spent in allopatry very short, will the differences we observe be large enough to match the expectation of drift. Our results therefore suggest that phenotypic differentiation has been lost through gene flow since post-glacial secondary contact, but not as quickly as would be expected if there was free gene flow across the hybrid zones. The chromosomal tension zones are confirmed to be partial barriers that prevent differentiated races from becoming phenotypically homogenous.
- Published
- 2013
- Full Text
- View/download PDF
29. Presence of the 54-chromosome common vole (Mammalia) on Olkhon Island (Lake Baikal, East Siberia, Russia), and the occurrence of an unusual X-chromosome variant
- Author
-
A.V. Tchabovsky and Svetlana Pavlova
- Subjects
Microtus rossiaemeridionalis ,lcsh:QH426-470 ,Population ,Species distribution ,Plant Science ,Article ,parasitic diseases ,Genetics ,Lake Baikal ,education ,X chromosome ,common voles ,X-chromosome ,education.field_of_study ,Microtus arvalis group ,biology ,Ecology ,Chromosome ,Karyotype ,biology.organism_classification ,lcsh:Genetics ,Arctic ,chromosome sibling species ,Animal Science and Zoology ,Vole ,Biotechnology - Abstract
We report a new finding of the 54-chromosome sibling species of the common vole in East Siberia - the first description from Olkhon Island (Lake Baikal). The karyotype of a male specimen revealed by routine staining and C-banding demonstrates the unambiguous presence of Microtus rossiaemeridionalis Ognev, 1924 (recently often regarded as as junior synonym of M. levis Miller, 1908). Comparison with conspecific specimens from the European part of the species range (from the left bank of the river Volga) shows that the vole of the island population has a smaller X-chromosome due to a reduced quantity of C-positive heterochromatin. This is just the third example of this type of X-chromosome variant with previous cases on an Arctic island (Svalbard) and the West Siberian lowland (Novosibirsk) and the only one on a lake island. Although M. rossiaemeridionalis is largely monomorphic in its karyotype, our data show that one specific type of X-chromosome variant is remarkably widespread, though rare.
- Published
- 2011
30. A distinct chromosome race of the common shrew (Sorex araneus Linnaeus, 1758) within the Arctic Circle in European Russia
- Author
-
Svetlana Pavlova
- Subjects
Araneus ,European Russia ,Autosome ,lcsh:QH426-470 ,biology ,Ecology ,common shrew ,chromosome race ,Shrew ,Chromosome ,Northern Europe ,Karyotype ,Plant Science ,Common shrew ,Sorex ,biology.organism_classification ,karyotype ,lcsh:Genetics ,Evolutionary biology ,biology.animal ,Genetics ,Animal Science and Zoology ,Nomenclature ,Biotechnology ,Sorex araneus - Abstract
A unique arm chromosome combination detected in the common shrew karyotype from a Karelian locality within the Arctic Circle (Kandalaksha State Nature Reserve, European Russia) is interpreted as a new chromosome race - Poyakonda. According to the standard nomenclature of G-banded chromosomes of Sorex araneus the karyotype contains the species specific bi-armed autosomes af, bc, jl, tu and the typical complex sex chromosome system (two metacentrics XX in the female and one metacentric/two acrocentrics XY1Y2 in the male). A group of race specific chromosomes includes 4 metacentric combinations (hn, ip, kq, mo) and two acrocentric chromosomes (g and r). In all 5 shrew specimens examined the same homozygous autosome complement 2Na=20 was found. Data available from neighbouring regions in Russia and, in particular, from adjacent Fennoscandian countries reveal complex relationships between karyotypes of common shrews from the European North.
- Published
- 2010
31. Field protocols for the genomic era
- Author
-
Nina Bulatova, Svetlana Pavlova, Jeremy B. Searle, N. V. Bystrakova, and Rena S. Nadjafova
- Subjects
Genetics ,lcsh:QH426-470 ,Plant Science ,Biology ,Molecular analysis ,molecular sampling procedure ,karyotype ,lcsh:Genetics ,Evolutionary biology ,Animal Science and Zoology ,Genomic information ,Mammalian genome ,molecular phylogeography ,mammalian genome ,field studies ,Organism ,Biotechnology ,Sorex araneus - Abstract
For many decades karyotype was the only source of overall genomic in- formation obtained from species of mammal. However, approaches have been de- veloped in recent years to obtain molecular and ultimately genomic information directly from the extracted DNA of an organism. Molecular data have accumu- lated hugely for mammalian taxa. The growing volume of studies should motivate fi eld researchers to collect suitable samples for molecular analysis from various species across all their ranges. This is the reason why we here include a molecu- lar sampling procedure within a fi eld work protocol, which also includes more tra- ditional (including cytogenetic) techniques. In this way we hope to foster the de- velopment of molecular and genomic studies in non-standard wild mammals.
- Published
- 2009
32. Hybridization of the common shrew (Sorex araneus L.) chromosomal races Moscow and Seliger: the probability of crossing and survival of hybrids
- Author
-
N. A. Shchipanov and Svetlana Pavlova
- Subjects
Araneus ,General Immunology and Microbiology ,biology ,Shrews ,Zoology ,Karyotype ,General Medicine ,Sorex ,Common shrew ,biology.organism_classification ,General Biochemistry, Genetics and Molecular Biology ,Russia ,Karyotyping ,Animals ,Hybridization, Genetic ,General Agricultural and Biological Sciences ,Crosses, Genetic ,Hybrid - Published
- 2008
33. Design of Structured Catalysts Based on Metallic Monoliths for Syngas Production via Partial Oxidation of Natural Gas
- Author
-
Sergey F. Tikhov, Valerii Terentiev, Alexander Khristolyubov, Svetlana Pavlova, Valerii Kuzmin, Valentin N. Parmon, Vladislav A. Sadykov, Vladimir Yu. Ulianitsky, Oleg Brizitsky, Zakhar Vostrikov, and O. I. Snegurenko
- Subjects
biology ,business.industry ,Mineralogy ,biology.organism_classification ,Methane ,Catalysis ,chemistry.chemical_compound ,Thermal conductivity ,chemistry ,Chemical engineering ,Natural gas ,Lanio ,Partial oxidation ,business ,FOIL method ,Syngas - Abstract
Structured catalysts based on metallic supports of different types with a high thermal conductivity were designed. The metal monolithic supports were made from a heat-resistant foil or gauze coated with a protective layer of Al 2 O 3 or zrO 2 using blast dusting. To prepare catalysts, Ce-Zr-La-O and LaNiO x promoted with Pt were successively supported on monoliths. A high and stable performance of these catalysts in the partial oxidation of methane (POM) at short contact times in the autothermal mode was demonstrated. In the reactor with a heat exchanger these catalysts operate in the autothermal mode without any heat preheat at very high gas velocities.
- Published
- 2007
- Full Text
- View/download PDF
34. [Identification of a novel WART-like chromosome rearrangement in complex heterozygotes in an interracial hybrid zone of the common shrew Sorex araneus L]
- Author
-
N. Sh. Bulatova and Svetlana Pavlova
- Subjects
Genetics ,Araneus ,Hybrid zone ,biology ,Chromosome ,Karyotype ,Chromosomal rearrangement ,Sorex ,Common shrew ,biology.organism_classification ,Hybrid - Abstract
Karyotypes uncharacteristic of pure races or hybrids were identified in the interracial hybrid zones of the common shrew Sorex araneus L. that were recently discovered in the European part of Russia. This suggests the actual existence in natural populations of WART-like rearrangements (whole-arm reciprocal trans-ocations) along with Robertsonian fusions of acrocentrics. Demonstration of new and still rare chromosome variants is the aim of this communication.
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.