13 results on '"Ryan DA"'
Search Results
2. Chemical Study, Predictions In Silico and Larvicide Activity of the Essential Oil of Root Philodendron deflexum Poepp
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Ricardo Marcelo dos Anjos Ferreira, Jaquelinne Santos Gomes, Cleison C. Lobato, Josiane Cruz Viana, Ryan da Silva Ramos, Ledayane Mayana Costa Barbosa, Dianel Alliance, Cleydson B. R. Santos, and Raimundo Nonato Picanço Souto
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Philodendron ,In silico ,02 engineering and technology ,General Chemistry ,Biology ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,biology.organism_classification ,law.invention ,Toxicology ,Computational Mathematics ,law ,Botany ,General Materials Science ,Electrical and Electronic Engineering ,0210 nano-technology ,Larvicide ,Essential oil - Published
- 2017
3. Identification of Potential Inhibitors from Pyriproxyfen with Insecticidal Activity by Virtual Screening
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Ryan da Silva Ramos, Carlos Henrique Tomich de Paula da Silva, Williams Jorge da Cruz Macêdo, Joaquín María Campos Rosa, Érica de Menezes Rabelo, Raimundo Nonato Picanço Souto, Josivan da Silva Costa, Alex Bruno Lobato Rodrigues, Rai C. Silva, Cleydson B. R. Santos, Carlton A. Taft, and Glauber V da Costa
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0301 basic medicine ,030103 biophysics ,Stereochemistry ,Structural similarity ,In silico ,LIGANTES ,Pharmaceutical Science ,lcsh:Medicine ,lcsh:RS1-441 ,Aedes aegypti ,Article ,lcsh:Pharmacy and materia medica ,03 medical and health sciences ,chemistry.chemical_compound ,Drug Discovery ,Molecule ,chemistry.chemical_classification ,Virtual screening ,biology ,juvenile hormone ,lcsh:R ,acetylcholinesterase ,molecular docking ,biology.organism_classification ,PASS ,030104 developmental biology ,Enzyme ,chemistry ,Toxicity class ,Molecular docking ,Acetylcholinesterase ,Molecular Medicine ,Juvenile hormone ,Pyriproxyfen - Abstract
Aedes aegypti is the main vector of dengue fever transmission, yellow fever, Zika, and chikungunya in tropical and subtropical regions and it is considered to cause health risks to millions of people in the world. In this study, we search to obtain new molecules with insecticidal potential against Ae. aegypti via virtual screening. Pyriproxyfen was chosen as a template compound to search molecules in the database Zinc_Natural_Stock (ZNSt) with structural similarity using ROCS (rapid overlay of chemical structures) and EON (electrostatic similarity) software, and in the final search, the top 100 were selected. Subsequently, in silico pharmacokinetic and toxicological properties were determined resulting in a total of 14 molecules, and these were submitted to the PASS online server for the prediction of biological insecticide and acetylcholinesterase activities, and only two selected molecules followed for the molecular docking study to evaluate the binding free energy and interaction mode. After these procedures were performed, toxicity risk assessment such as LD50 values in mg/kg and toxicity class using the PROTOX online server, were undertaken. Molecule ZINC00001624 presented potential for inhibition for the acetylcholinesterase enzyme (insect and human) with a binding affinity value of -10.5 and -10.3 kcal/mol, respectively. The interaction with the juvenile hormone was -11.4 kcal/mol for the molecule ZINC00001021. Molecules ZINC00001021 and ZINC00001624 had excellent predictions in all the steps of the study and may be indicated as the most promising molecules resulting from the virtual screening of new insecticidal agents., Federal University of Amapá, Program in Biotechnology and Biodiversity-Network BIONORTE, Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) and Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) for funding in the publication of this article.
- Published
- 2019
4. Hierarchical virtual screening of potential insectides inhibitors of acetylcholinesterase and juvenile hormone from Temephos
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Joaquín María Campos Rosa, Ryan da Silva Ramos, Carlos Henrique Tomich de Paula da Silva, Elenilze F B Ferreira, Ester M F de Sá, Raimundo Nonato Picanço Souto, Cássio M Lobato, Cleydson B. R. Santos, Glauber V da Costa, Luciane B. Silva, Leonardo B Federico, and Alicia K P da Silva
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0301 basic medicine ,030103 biophysics ,LIGANTES ,lcsh:Medicine ,lcsh:RS1-441 ,Pharmaceutical Science ,Aedes aegypti ,medicine.disease_cause ,Article ,Dengue fever ,lcsh:Pharmacy and materia medica ,03 medical and health sciences ,chemistry.chemical_compound ,Drug Discovery ,medicine ,Chikungunya ,chemistry.chemical_classification ,Virtual screening ,Temephos ,biology ,juvenile hormone ,lcsh:R ,acetylcholinesterase ,molecular docking ,medicine.disease ,biology.organism_classification ,Ligand (biochemistry) ,Acetylcholinesterase ,030104 developmental biology ,Enzyme ,Biochemistry ,chemistry ,Molecular docking ,Juvenile hormone ,Molecular Medicine ,temephos - Abstract
Aedes aegypti (Linnaeus, 1762, Diptera: Culicidae) is the main vector transmitting viral diseases such as dengue fever, dengue haemorrhagic fever, urban yellow fever, zika and chikungunya. Worldwide, especially in the Americas and Brazil, many cases of dengue have been reported in recent years, which have shown significant growth. The main control strategy is the elimination of the vector, carried out through various education programs, to change human habits, but the most usual is biological control, together with environmental management and chemical control. The most commonly insecticide used is temephos (an organophosphorus compound), but Aedes aegypti populations have shown resistance and the product is highly toxic, so we chose it as a template molecule to perform a ligand-based virtual screening in the ChemBrigde (DIVERSet-CL subcollection) database, searching for derivatives with similarity in shape (ROCS) and electrostatic potential (EON). Thus, fourty-five molecules were filtered based on their pharmacokinetic and toxicological properties and 11 molecules were selected by a molecular docking study, including binding affinity and mode of interaction. The L46, L66 and L68 molecules show potential inhibitory activity for both the insect (&minus, 9.28, &minus, 10.08 and &minus, 6.78 Kcal/mol, respectively) and human (&minus, 6.05, 6.25 and 7.2 Kcal/mol respectively) enzymes, as well as the juvenile hormone protein (&minus, 9.2, &minus, 10.96 and &minus, 8.16 kcal/mol, respectively), showing a significant difference in comparison to the template molecule temephos. Molecules L46, L66 and L68 interacted with important amino acids at each catalytic site of the enzyme reported in the literature. Thus, the molecules here investigated are potential inhibitors for both the acetylcholinesterase enzymes and juvenile hormone protein&ndash, from insect and humans, characterizing them as a potential insecticide against the Aedes aegypti mosquito.
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- 2019
5. Phytochemical Screening of Leaves of Catharanthus roseus (L.)
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Amanda Almeida, Sheylla Susan Moreira da Silva de Almeida, and Ryan da Silva Ramos
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Phytochemistry ,biology ,Phytochemical ,Botany ,General Engineering ,Plant species ,Energy Engineering and Power Technology ,Catharanthus roseus ,Pharmacognosy ,biology.organism_classification ,Original research - Abstract
Aims: To determine the major classes of secondary metabolites found in the leaves of Catharanthus roseus (L.). Study Design: The study aimed to determine the major classes of secondary metabolites of plant species Catharanthus roseus through technical and classical methodologies. Place and Duration of Study: Laboratory of Pharmacognosy and Phytochemistry of Pharmacy Original Research Article
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- 2016
6. Phytochemical Study, Chemicalphysical Analysis and Toxicological Testing of Stem Bark of Dalbergia monetaria L. f
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Ester Melo, Ryan da Silva Ramos, and Sheylla Susan Moreira da Silva de Almeida
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040101 forestry ,0106 biological sciences ,Stem bark ,Phytochemical ,Traditional medicine ,010608 biotechnology ,Dalbergia monetaria ,0401 agriculture, forestry, and fisheries ,04 agricultural and veterinary sciences ,General Medicine ,Biology ,01 natural sciences - Published
- 2016
7. Study of Physical and Chemical Composition and Quality of Hoplias malabaricus and Leporinus friderici (Bloch, 1794) Fillet Collected in Pirativa River -Santana-AP
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Ryan da Silva Ramos, Sheylla Susan Moreira da Silva de Almeida, and José Policarpo Miranda Júnior
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biology ,0402 animal and dairy science ,General Engineering ,Energy Engineering and Power Technology ,04 agricultural and veterinary sciences ,biology.organism_classification ,040201 dairy & animal science ,Hoplias malabaricus ,Fishery ,Geography ,040103 agronomy & agriculture ,0401 agriculture, forestry, and fisheries ,Leporinus friderici ,Fillet (mechanics) - Abstract
Aims: The purpose of this research was to perform the physical and chemical study of the composition and the quality of the fillet of Hoplias malabaricus (Traira) and Leporinus friderici (Bloch, 1794) collected in Pirativa River-Santana-Ap. Study Design: This study was chosen in the areas on the banks of Pirativa river in anthropized and non-anthropized areas in the city of Sao Raimundo, at coordinates N 00 02'08,9 "W 051 15 '32.3" in Santana-AP. Place and Duration of Study: the research was conducted in Pharmacognosy and Phytochemical Laboratory of the Course of Pharmacy from January to September of 2014, and in the Fish Processing Laboratory of the Federal University of Amapa (UNIFAP), from July to September of 2014.
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- 2016
8. Phytochemical Study, Microbiological Activity and Cytotoxicity of Leaves and Stem from Plant Species Mikania lindleyana DC
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Dionel Silva, Wilkyson Costa, Luís Takiyama, Sheylla Susan Moreira da Silva de Almeida, Ryan da Silva Ramos, and Edilson Cunha
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biology ,Traditional medicine ,Phytochemical ,General Engineering ,Plant species ,Energy Engineering and Power Technology ,Mikania ,biology.organism_classification ,Cytotoxicity - Published
- 2016
9. An In Silico Study of the Antioxidant Ability for Two Caffeine Analogs Using Molecular Docking and Quantum Chemical Methods
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Karina da Silva Lopes Costa, Ryan da Silva Ramos, Josivan da Silva Costa, Cleydson B. R. Santos, Davi do Socorro Barros Brasil, Williams Jorge da Cruz Macêdo, Carlos Henrique Tomich de Paula da Silva, Elenilze F B Ferreira, Joaquín M. Campos, and Rosivaldo S. Borges
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0301 basic medicine ,Antioxidant ,Cytochrome ,Binding free energy ,medicine.medical_treatment ,Pharmaceutical Science ,Free radicals ,medicine.disease_cause ,Antioxidants ,Analytical Chemistry ,Catalytic Domain ,Drug Discovery ,Hydroxyurea ,oxidative stress ,HOMEOSTASE ,Receptor ,chemistry.chemical_classification ,biology ,Enzymes ,Molecular Docking Simulation ,Antioxidant potential ,Biochemistry ,Chemistry (miscellaneous) ,Molecular docking ,Molecular Medicine ,Fluorouracil ,In silico ,free radicals ,Article ,lcsh:QD241-441 ,Molecular descriptors ,03 medical and health sciences ,molecular descriptors ,Febuxostat ,lcsh:Organic chemistry ,Molecular descriptor ,Caffeine ,medicine ,Molecule ,Computer Simulation ,Physical and Theoretical Chemistry ,binding free energy ,Organic Chemistry ,molecular docking ,030104 developmental biology ,Enzyme ,chemistry ,antioxidant potential ,Oxidative stress ,biology.protein ,Quantum Theory - Abstract
The antioxidant activity of molecules constitutes an important factor for the regulation of redox homeostasis and reduction of the oxidative stress. Cells affected by oxidative stress can undergo genetic alteration, causing structural changes and promoting the onset of chronic diseases, such as cancer. We have performed an in silico study to evaluate the antioxidant potential of two molecules of the zinc database: ZINC08706191 (Z91) and ZINC08992920 (Z20). Molecular docking, quantum chemical calculations (HF/6-31G**) and Pearson&rsquo, s correlation have been performed. Molecular docking results of Z91 and Z20 showed both the lower binding affinity (BA) and inhibition constant (Ki) values for the receptor-ligand interactions in the three tested enzymes (cytochrome P450&mdash, CP450, myeloperoxidase&mdash, MP and NADPH oxidase&mdash, NO) than the control molecules (5-fluorouracil&mdash, FLU, melatonin&mdash, MEL and dextromethorphan&mdash, DEX, for each receptor respectively). Molecular descriptors were correlated with Ki and strong correlations were observed for the CP450, MP and NO receptors. These and other results attest the significant antioxidant ability of Z91 and Z20, that may be indicated for further analyses in relation to the control of oxidative stress and as possible antioxidant agents to be used in the pharmaceutical industry.
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- 2018
10. Oil from the fruits of Pterodon emarginatus Vog.:: a traditional anti-inflammatory. Study combining in vivo and in silico
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José Luis Balderas-López, Ryan da Silva Ramos, Cleydson B. R. Santos, Gabriel Monteiro da Silva, Silvana Giuliatti, Andrés Navarrete, Brenda Lorena Sánchez Ortiz, and José Carlos Tavares Carvalho
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0301 basic medicine ,Male ,medicine.drug_class ,Croton Oil ,In silico ,Indomethacin ,Anti-Inflammatory Agents ,Pain ,Dermatitis, Contact ,Anti-inflammatory ,03 medical and health sciences ,Mice ,In vivo ,Drug Discovery ,medicine ,Pterodon emarginatus ,Animals ,Humans ,Plant Oils ,Croton oil ,Stomach Ulcer ,Binding site ,Rats, Wistar ,Acetic Acid ,Pharmacology ,biology ,Chemistry ,Fabaceae ,biology.organism_classification ,Ligand (biochemistry) ,FITOTERAPIA ,Arthritis, Experimental ,Molecular Docking Simulation ,030104 developmental biology ,Biochemistry ,Homo sapiens ,Cyclooxygenase 2 ,Fruit ,Diterpenes ,Phytotherapy - Abstract
The oil obtained from the fruits of Pterodon emarginatus Vog. (OPe) is used orally and topically, in traditional medicine for some purposes, such as acute and chronic inflammatory states as rheumatoid arthritis.In this work, the anti-inflammatory activity of the OPe was demonstrated based on several animal models and presented an in silico study based on the 6α,7β-dihydroxy-vouacapan-17β-oic acid (DHVA) majority compound of the OPe to evaluate the interaction this compound, with cyclooxygenase-2 (COX-2) in 4COX (Mus musculus) and 5KIR (Homo sapiens) and molecular dynamics simulation.The OPe (498 mg/kg, p.o) significantly inhibited (p 0.05, Student t-test) the primary and secondary reactions of arthritis by Freund's Complete Adjuvant (FCA) and in dermatitis induced by croton oil in mice, OPe inhibited peak of edema. In vascular permeability test in rats, the treatment with OPe was able to block the response to PGEAs expected, all tested ligands were capable of forming hydrogen interactions with residues at their respective binding sites, but the DHVA ligand was capable of creating slightly more hydrogen bonds when docked to either 4COX or 5KIR than the other tested ligands, thus demonstrating the participation of this compound in the anti-inflammatory and antialgic responses observed in the in vivo assays as a COX-2 inhibitor. Therefore, the results obtained support the traditional use of OPe for inflammatory and gastric problems.
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- 2018
11. Phytochemical Study, Microbiological and Cytotoxicity Activity in Artemia salina Leach, Aerial parts of Petiveria alliacea L. Phytolaccaceae
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Ryan da Silva Ramos, Sheylla Susan Moreira da Silva de Almeida, and Darllen Suzanny Barbosa de Oliveira
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biology ,Traditional medicine ,Chemistry ,Pharmaceutical Science ,medicine.disease_cause ,biology.organism_classification ,Antimicrobial ,chemistry.chemical_compound ,lcsh:Biology (General) ,Complementary and alternative medicine ,Phytochemical ,Staphylococcus aureus ,medicine ,Pharmacology (medical) ,Phenols ,Artemia salina ,lcsh:QH301-705.5 ,Escherichia coli ,Bacteria ,Petiveria alliacea - Abstract
This study aimed to phytochemical study of the aerial parts of Petiveria alliacea L. (young branches and leaves), cytotoxicity evaluation (LC50) of leaves in relation to Artemia salina L. and antimicrobial activity, which were used strains of gram-positive bacterium: Staphylococcus aureus and gram-negative: Klebsiella pneumoniae and Escherichia coli, these submitted to the methanol crude extract (MCE) of leaves, at the following concentrations: 25.50 and 100mg/mL. It was possible to identify in the young branches of P. alliacea L. the presence of organic acids, phenols and tannins in the alkaloids leaves, steroids and triterpenoids, saponins, phenols and tannins, where the activities of these metabolites match with some information alleged by the population. The leaves’ Methanol Crude Extract showed LC50=1709.77μg/mL, being nontoxic at the tested concentrations, whereas for plant extract in relation to A.salina are considered nontoxic when LC50>1000μg/mL. The antimicrobial activity of the Methanol Crude Extract of the leaves showed inhibition only for the bacteria Escherichia coli at 100mg/mL concentration, and this activity may be related to the presence of phenols and tannins in the extract. The obtained results turn the species promising in search of secondary metabolites, but there is the need of further studies to identify its main active ingredients. Palavras-chave: Mucuracaa, Phytochemical Screening, Class of Compounds. DOI: http://dx.doi.org/10.18561/2179-5746/biotaamazonia.v3n3p76-82
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- 2013
12. Chemical Composition, an Antioxidant, Cytotoxic and Microbiological Activity of the Essential Oil from the Leaves of Aeollanthus suaveolens Mart. ex Spreng
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Lourivaldo S. Santos, João B. Fernandes, Ranggel Carvalho Simões, Ryan da Silva Ramos, Ana Luzia Ferreira Farias, Érica de Menezes Rabelo, Rosany Lopes Martins, Sheylla Susan Moreira da Silva de Almeida, and Alex Bruno Lobato Rodrigues
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0301 basic medicine ,Bacterial Diseases ,lcsh:Medicine ,Chemical Composition ,Linalyl acetate ,medicine.disease_cause ,Toxicology ,Pathology and Laboratory Medicine ,01 natural sciences ,Biochemistry ,Antioxidants ,law.invention ,chemistry.chemical_compound ,Linalool ,Anti-Infective Agents ,law ,Salmonella ,Medicine and Health Sciences ,lcsh:Science ,Multidisciplinary ,biology ,Traditional medicine ,Antimicrobials ,Drugs ,Antimicrobial ,Lipids ,Bacterial Pathogens ,Chemistry ,Infectious Diseases ,Staphylococcus aureus ,Medical Microbiology ,Physical Sciences ,Aeollanthus ,Prokaryotic Models ,Pathogens ,Sesquiterpenes ,Research Article ,Escherichia ,Acyclic Monoterpenes ,Microbial Sensitivity Tests ,Research and Analysis Methods ,Microbiology ,03 medical and health sciences ,Model Organisms ,Enterobacteriaceae ,Microbial Control ,Botany ,medicine ,Escherichia coli ,Oils, Volatile ,Microbial Pathogens ,Essential oil ,Cell Proliferation ,Polycyclic Sesquiterpenes ,Pharmacology ,Lamiaceae ,Toxicity ,Bacteria ,010401 analytical chemistry ,Gut Bacteria ,lcsh:R ,Organisms ,Biology and Life Sciences ,biology.organism_classification ,0104 chemical sciences ,Plant Leaves ,030104 developmental biology ,chemistry ,Monoterpenes ,lcsh:Q ,Artemia salina ,Oils - Abstract
Aeollanthus suaveolens species popularly known as catinga de mulata belongs to the Lamiaceae family. In the Amazon region, it is used in folk medicine for the treatment of gastritis, convulsions of epileptic origin, stomach pain and diarrhea in the form of tea and juice. Essential oils have analgesic, anti-inflammatory, and antimicrobial activity. This study evaluated the chemical composition of the A. suaveolens essential oil, and its cytotoxic, antimicrobial and antioxidant activity on Artemia salina Leach. The plant species was collected in Fazendinha district in the city of Macapa-AP. The essential oil obtained from the process was performed by hydrodistillation and identification of components by gas chromatography coupled with mass spectrometer. The antioxidant activity was evaluated by the kidnapping method of 2,2- diphenyl -1-picrilhidrazil radical, while the cytotoxic activity was assessed using saline A. and the microbiological activity was carried out by microdilution method with Escherichia coli, Salmonella sp. and Staphylococcus aureus bacteria. In a chromatographic analysis, the major constituents found in the essential oil of A. suaveolens were (E) -β-farnesene (37.615%), Linalool (33.375%), α-Santalene (3.255%) and linalyl acetate (3.222%). The results showed that the Escherichia coli and Salmonella sp. bacteria were more susceptible to MIC 50 mg.mL-1 when compared with the Staphylococcus aureus bacterium MIC 100 mg.mL-1. With respect to MBC concentration of 100 mg.mL-1 it was sufficient to inhibit the growth of E. coli. The essential oil did not show antioxidant activity, however, has a high cytotoxic activity against the A. salina, LC50 8.90 μg.mL-1.
- Published
- 2016
13. Chemical Study, Predictions In Silico and Larvicide Activity of the Essential Oil of Root Philodendron deflexum Poepp. (Journal of Computational and Theoretical Nanoscience, Vol. 14(7), pp. 3330–3337 (2017))
- Author
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Ledayane Mayana Costa Barbosa, Dianel Alliance, Josiane Cruz Viana, Ricardo Ferreira, Jaquelinne Santos Gomes, Cleison C. Lobato, Cleydson B. R. Santos, Ryan da Silva Ramos, and Raimundo Nonato Picanço Souto
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Philodendron ,biology ,In silico ,General Chemistry ,Condensed Matter Physics ,biology.organism_classification ,law.invention ,Computational Mathematics ,law ,Botany ,General Materials Science ,Electrical and Electronic Engineering ,Larvicide ,Essential oil - Published
- 2018
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