Search

Genomic selection uses genome-wide molecular marker data to predict an animal's genetic value in the breeding program. This study's objective was to present heritability estimates and accuracy of genomic prediction using different methods for meat quality traits in Pekin duck. There were two kinds of ducks in the genomic selection training population: 639 fat-type ducks and 540 lean-type ducks. A single-trait animal model was used to estimate heritability and adjust the phenotype. GBLUP and BayesR methods were performed to estimate the SNP effects. The accuracy of genomic prediction was calculated using 5-fold cross-validation. The accuracy varied from 0.235 to 0.501 with the lowest accuracy estimated for traits associated with abdominal fat weight in the combined population and the most remarkable accuracy observed for abdominal fat percentage traits in the lean-type duck population. Overall, BayesR can achieve the highest prediction accuracy, while the combined population strategy could be used to increase the accuracy of prediction only when the two populations have the same breeding aim for a certain trait.

Objective: According to market demand, meat duck breeding mainly includes 2 breeding directions: lean Pekin duck (LPD) and fat Pekin duck (FPD). The aim of the present study was to compare carcass and meat quality traits between 2 strains, and to provide basic data for guidelines of processing and meat quality improvement. Methods: A total of 62 female Pekin ducks (32 LPDs and 30 FPDs) were slaughtered at the age of 42 days. The live body weight and carcass traits were measured and calculated. Physical properties of breast muscle were determined by texture analyzer and muscle fibers were measured by paraffin sections. The content of inosine monophosphate (IMP), intramuscular fat (IMF) and fatty acids composition were measured by high-performance liquid chromatography, Soxhlet extraction method and automated gas chromatography respectively. Results: The results showed that the bodyweight of LPDs was higher than that of FPDs. FPDs were significantly higher than LPDs in subcutaneous fat thickness, subcutaneous fat weight, subcutaneous fat percentage, abdominal fat percentage and abdominal fat shear force (p0.05). The polyunsaturated fatty acid content of LPDs was significantly higher than that of FPDs (p

Jie Wang,1,2 Yun Wu,3 Md Nazim Uddin,2,4 Rong Chen,5 Jian-Ping Hao5 1Department of Pharmacy, First Affiliated Hospital of Xinjiang Medical University, Urumqi, 830011, People’s Republic of China; 2School of Basic Medicine and Clinical Pharmacy, China Pharmaceutical University, Nanjing, 211198, People’s Republic of China; 3Department of General Medicine, First Affiliated Hospital of Xinjiang Medical University, Urumqi, 830011, People’s Republic of China; 4Bangladesh Council of Scientific and Industrial Research (BCSIR), Dhaka, 1205, Bangladesh; 5Department of Hematology, First Affiliated Hospital of Xinjiang Medical University, Urumqi, 830011, People’s Republic of ChinaCorrespondence: Jian-Ping Hao No. 137 Liyushan S. Road, Urumqi, Xinjiang, People’s Republic of ChinaTel +86 13579876416Email 13579876416@163.comIntroduction: Essential thrombocytosis (ET) is a group of myeloproliferative neoplasms characterized by abnormal proliferation of platelet and megakaryocytes. Research on potential key genes and novel regulatory markers in essential thrombocythemia (ET) is still limited.Methods: Downloading array profiles from the Gene Expression Omnibus database, we identified the differentially expressed genes (DEGs) through comprehensive bioinformatic analysis. GO, and REACTOME pathway enrichment analysis was used to predict the potential functions of DEGs. Besides, constructing a protein–protein interaction (PPI) network through the STRING database, we validated the expression level of hub genes in an independent cohort of ET, and the transcription factors (TFs) were detected in the regulatory networks of TFs and DEGs. And the candidate drugs that are targeting hub genes were identified using the DGIdb database.Results: We identified 63 overlap DEGs that included 21 common up-regulated and 42 common down-regulated genes from two datasets. Functional enrichment analysis shows that the DEGs are mainly enriched in the immune system and inflammatory processes. Through PPI network analysis, ACTB, PTPRC, ACTR2, FYB, STAT1, ETS1, IL7R, IKZF1, FGL2, and CTSS were selected as hub genes. Interestingly, we found that the dysregulated hub genes are also aberrantly expressed in a bone marrow cohort of ET. Moreover, we found that the expression of CTSS, FGL2, IKZF1, STAT1, FYB, ACTR2, PTPRC, and ACTB genes were significantly under-expressed in ET (P< 0.05), which is consistent with our bioinformatics analysis. The ROC curve analysis also shows that these hub genes have good diagnostic value. Besides, we identified 4 TFs (SPI1, IRF4, SRF, and AR) as master transcriptional regulators that were associated with regulating the DEGs in ET. Cyclophosphamide, prednisone, fluorouracil, ruxolitinib, and lenalidomide were predicted as potential candidate drugs for the treatment of ET.Discussion: These dysregulated genes and predicted key regulators had a significant relationship with the occurrence of ET with affecting the immune system and inflammation of the processes. Some of the immunomodulatory drugs have potential value by targeting ACTB, PTPRC, IL7R, and IKZF1 genes in the treatment of ET.Keywords: essential thrombocythemia, hub genes, regulatory markers, candidate drugs, bioinformatics analysis

Obstacles in different tissue layers of leaves can influence aphid feeding behavior and host preference. In this study, we examined the feeding behaviors of cabbage aphids Brevicoryne brassicae (Linnaeus) (Hemiptera: Aphididae) on the five oilseed rape cultivars with varied levels of aphid susceptibility using the electropenetrography (EPG) technique. The leaf anatomical structures of the five oilseed rape cultivars were also analyzed using the microscopical observations. The results showed that the cabbage aphid feeding behaviors varied among the five cultivars. On ‘Dehezayou8’ which had the highest aphid population in the field, the cabbage aphids showed significantly shorter non-probing time to the first phloem contact, shorter duration of the no phloematic phase, and longer average probing duration than those on ‘Zhongyou821’ which showed the least aphid population. In the mesophyll of ‘Dehezayou8,’ the cabbage aphids made significantly fewer brief probes and spent a shorter time in penetrating the mesophyll cells than on ‘Zhongyou821.’ In the phloem, the aphids on ‘Dehezayou8’ secreted less saliva and ingested more sap than those on ‘Zhongyou821.’ On ‘Dehezayou8,’ the aphids took the shortest time to first penetration than they did on the other cultivars. ‘Dehezayou8’ had relatively thin upper epidermis and rare short trichomes, which might have facilitated the aphid infestation. Our results suggested that the leaf tissue characteristics of oilseed rape cultivars, such as epidermis thickness, trichomes, and the factors from mesophyll and phloem could be associated with aphid feeding preference and therefore aphid population in the field.

Meat-quality traits play an essential role in meat poultry production. To determine the genetic mechanisms of meat quality in Pekin ducks, we performed a large-scale GWAS to identify quantitative trait loci affecting meat quality in Pekin ducks. We measured 10 traits in 542 Pekin ducks and genotyped each duck using genotyping-by-sequencing. The genetic parameters (genomic heritability, genetic correlation) for 10 meat-quality related traits were evaluated. Based on the large genotype-phenotype dataset, we performed GWASs for all of these traits. A total of 33 significant QTL (P < 3.03 × 10-5 ) across 13 chromosomes were identified by loci-based analysis. Some newly identified candidate genes were discovered for fat-deposition and meat-quality traits, including PAG1 for body weight and eviscerated weight, INTU and NUP35 for abdominal fat weight and ratio, NUP3 and ARHGDIB for skin fat weight and ratio, GOLGA5 for breast muscle toughness and breast tenderness, and CTDSPL and PKP1 for breast muscle thickness. The current study is the first systematic report regarding duck meat quality.

Body weight–related traits and feeding behavior traits are important in poultry breeding and production. To investigate the heritability of feeding behavior and their genetic correlation with body weight–related traits in Pekin ducks, 5,594 Pekin ducks were selected. The information about body weight–related traits and feeding behavior from 3 to 6 wk of age were recorded by automatic electronic feeders. The heritability estimates for body weight, residual feed intake, and feeding behavior traits are relatively high (ranging from 0.29 to 0.65). We observed that total feed intake, meal feed intake, body weight at the age of 3 wk, and daily body weight gain had strong positive genetic correlations with body weight at the age of 6 wk. Moreover, body weight at the age of 3 wk also showed a positive genetic correlation with the feed conversion ratio (0.33). Total feeding time, daily feed intake, and feeding rate had significant positive phenotypic correlations with feed efficiency. However, the average interval between meals, the number of daily visits, and the number of meals all had a low genetic or phenotypic relationship with body weight and feed efficiency. In conclusion, our study revealed that body weight, residual feed intake, and feeding behavior traits were all highly heritable traits, and the selection for certain feeding behaviors could improve feed efficiency in Pekin ducks. This study is the first report about genetic parameter estimates about feeding behaviors in ducks based on large datasets and provides solid data for genetic study in ducks.

Blood components are considered to reflect nutrient metabolism and immune activity in both humans and animals. In this study, we measured 12 blood components in Pekin ducks and performed genome-wide association analysis to identify the QTLs (quantitative trait locus) using a genotyping-by-sequencing strategy. A total of 54 QTLs were identified for blood components. One genome-wide significant QTL for alkaline phosphatase was identified within the intron-region of the OTOG gene (P = 1.31E-07). Moreover, 21 genome-wide significant SNPs for the level of serum cholinesterase were identified on six different scaffolds. In addition, for serum calcium, one genome-wide significant QTL was identified in the upstream region of gene RAB11B. These results provide new markers for functional studies in Pekin ducks, and several candidate genes were identified, which may provide additional insights into specific mechanisms for blood metabolism in ducks and their potential application for duck breeding programs.

Background Essential oils (EOs) of Lavandula angustifolia, mainly consist of monoterpenoids and sesquiterpenoids, are of great commercial value. The multi-flower spiciform thyrse of lavender not only determines the output of EOs but also reflects an environmental adaption strategy. With the flower development and blossom in turn, the fluctuation of the volatile terpenoids displayed a regular change at each axis. However, the molecular mechanism underlying the regulation of volatile terpenoids during the process of flowering is poorly understood in lavender. Here, we combine metabolite and RNA-Seq analyses of flowers of five developmental stages at first- and second-axis (FFDSFSA) and initial flower bud (FB0) to discover the active terpenoid biosynthesis as well as flowering-related genes. Results A total of 56 mono- and sesquiterpenoids were identified in the EOs of L. angustifolia ‘JX-2’. FB0’ EO consists of 55 compounds and the two highest compounds, β-trans-ocimene (20.57%) and (+)-R-limonene (17.00%), can get rid of 74.71 and 78.41% aphids in Y-tube olfactometer experiments, respectively. With sequential and successive blossoms, temporally regulated volatiles were linked to pollinator attraction in field and olfaction bioassays. In three characteristic compounds of FFDSFSA’ EOs, linalyl acetate (72.73%) and lavandulyl acetate (72.09%) attracted more bees than linalool (45.35%). Many transcripts related to flowering time and volatile terpenoid metabolism expressed differently during the flower development. Similar metabolic and transcriptomic profiles were observed when florets from the two axes were maintained at the same maturity grade. Besides both compounds and differentially expressed genes were rich in FB0, most volatile compounds were significantly correlated with FB0-specific gene module. Most key regulators related to flowering and terpenoid metabolism were interconnected in the subnetwork of FB0-specific module, suggesting the cross-talk between the two biological processes to some degree. Conclusions Characteristic compounds and gene expression profile of FB0 exhibit ecological value in pest control. The precise control of each-axis flowering and regular emissions at transcriptional and metabolic level are important to pollinators attraction for lavender. Our study sheds new light on lavender maximizes its fitness from “gene-volatile terpenoid-insect” three layers. Electronic supplementary material The online version of this article (10.1186/s12870-019-1908-6) contains supplementary material, which is available to authorized users.

With-No-Lysine kinases (WNK) have been reported to be associated with plant growth regulation in Arabidopsis, soybean, and rice, but little is known of their roles in fruits. In this study, a total of 114 WNK genes were identified from 8 fruit trees species, and these WNK genes belonged to 2 classes (I and II) that respectively contain 4 (A, B, C, D) and 2 groups (E, F). The WNK genes had variable exon-intron structures and were randomly distributed among most chromosomes of each genus. The expression levels of six of the 18 WNK genes in peach were almost undetectable in fruits, suggesting that they may not be associated with fruit development and ripening. Of the other 12 WNK genes, PpWNK.B1 exhibited stronger stability of expression levels than the best reference genes reported previously in fruits from two peach cultivars. These results suggested that PpWNK.B1 could be a reliable reference gene for gene expression studies of peach fruit. Moreover, qRT-PCR assays yielded evidence that when using single reference gene as internal control, mistakes were more possible, indicating that the use of three reference genes is necessary for gene expression studies. Based on the gene expression profiles validated by qRT-PCR, PpWNK.A1 is predicted to likely be involved in fruit ripening, while PpWNK.A2 and PpWNK.E3.1 are likely associated with early fruit development. The present study represented the WNK genes in fruits, and it will be a valuable resource in continuing investigation of gene regulation network during fruit development and ripening. Keywords: peach, With-No-Lysine kinase, phylogenetic tree, reference gene, gene expression

Background Pekin duck products have become popular in Asia over recent decades and account for an increasing market share. However, the genetic mechanisms affecting carcass growth in Pekin ducks remain unknown. This study aimed to identify quantitative trait loci affecting body size and carcass yields in Pekin ducks. Results We measured 18 carcass traits in 639 Pekin ducks and performed genotyping using genotyping-by-sequencing (GBS). Loci-based association analysis detected 37 significant loci for the 17 traits. Thirty-seven identified candidate genes were involved in many biological processes. One single nucleotide polymorphism (SNP) (Chr1_140105435 A > T) located in the intron of the ATPase phospholipid transporting 11A gene (ATP11A) attained genome-wide significance associated with five weight traits. Eight SNPs were significantly associated with three body size traits, including the candidate gene plexin domain containing 2 (PLXDC2) associated with breast width and tensin 3 (TNS3) associated with fossil bone length. Only two SNPs were significantly associated with foot weight and four SNPs were significantly associated with heart weight. In the gene-based analysis, three genes (LOC101791418, TUBGCP3 (encoding tubulin gamma complex-associated protein 3), and ATP11A) were associated with four traits (42-day body weight, eviscerated weight, half-eviscerated weight, and leg muscle weight percentage). However, no loci were significantly associated with leg muscle weight in this study. Conclusions The novel results of this study improve our understanding of the genetic mechanisms regulating body growth in ducks and thus provide a genetic basis for breeding programs aimed at maximizing the economic potential of Pekin ducks. Electronic supplementary material The online version of this article (10.1186/s12864-018-5379-1) contains supplementary material, which is available to authorized users.

Hepatocellular carcinoma (HCC) is the 6th most prevalent cancer and the 4th leading cause of cancer-related death worldwide. Mechanisms explaining the carcinogenesis of HCC are not clear yet. In recent years, rapid development of N6-methyladenosine (m6A) modification provides a fresh approach to disclosing this mystery. As the most prevalent mRNA modification in eukaryotes, m6A modification is capable to post-transcriptionally affect RNA splicing, stability, and translation, thus participating in a variety of biological and pathological processes including cell proliferation, apoptosis, tumor invasion and metastasis. METTL3 has been recognized as a pivotal methyltransferase and essential to the performance of m6A modification. METTL3 can regulate RNA expression in a m6A-dependent manner and contribute to the carcinogenesis, tumor progression, and drug resistance of HCC. In the present review, we are going to make a clear summary of the known roles of METTL3 in HCC, and explicitly narrate the potential mechanisms for these roles.

ObjectiveTo explore the efficacy and safety of EGFR-TKI combined with thymosin therapy in advanced non-small cell lung cancer (NSCLC) patients harboring active EGFR mutations.MethodsPatients confirmed as advanced NSCLC with active EGFR mutations were recruited from August 2008 to July 2018 retrospectively. Patients treated with EGFR-TKI were classified as the EGFR-TKI group. And those received EGFR-TKI and thymosin therapy were designated as the EGFR-TKI plus thymosin group. The primary endpoint was progression-free survival (PFS). The secondary endpoints included overall survival (OS), tumor response and adverse effects.ResultsThe median PFS was significantly longer in EGFR-TKI plus thymosin group than that in EGFR-TKI group (14.4 months vs. 9.2 months; HR=0.433, 95% CI 0.322 - 0.582, Pvs. 19.8 months; HR=0.430, 95% CI 0.319 - 0.580, PP=0.918). The disease control rate was 96.9% in EGFR-TKI plus thymosin group and 97.7% in EGFR-TKI group (P=1.000). There were no significant differences in adverse effects between the two groups. The number of CD3+T cells in peripheral blood decreased significantly after treatment including both CD3+CD4+T and CD3+CD8+T subsets in EGFR-TKI group, but not in EGFR-TKI plus thymosin group.ConclusionsCombination of EGFR-TKI and thymosin can significantly prolong the PFS and OS compared with EGFR-TKI monotherapy without more adverse events, which offers a new strategy in clinic.

Beach plum (Prunus maritima) is an ornamental plant, famous for its strong salt and drought stress tolerance. However, the poor growth rate of transplanted seedlings has seriously restricted its application in salinized soil. This study investigated the effects of inoculation with arbuscular mycorrhizal fungus (AMF), Funneliformis mosseae, and phosphate-solubilizing fungus (PSF), Apophysomyces spartima, on the growth, nutrient (N, P, and K) uptake, and photosynthesis of beach plum under saline (170 mM NaCl) and non-saline (0 mM NaCl) conditions. We aimed to find measures to increase the growth rate of beach plum in saline-alkali land and to understand the reasons for this increase. The results showed that salinization adversely affected colonization by AMF but positively increased PSF populations (increased by 33.9–93.3% over non-NaCl treatment). The dual application of AMF and PSF mitigated the effects of salt stress on all growth parameters and nutrient uptake, significantly for roots (dry weight and P and N contents increased by 91.0%, 68.9%, and 40%, respectively, over non-NaCl treatment). Salinization caused significant reductions in net photosynthetic rate (Pn), stomatal conductance (Gs), transpiration rate (E), and intercellular CO2 concentration (Ci) value, while inoculation with AMF and PSF inoculations significantly abated such reductions. The maximum efficiency of photosystem II (PSII) (Fv/Fm), the photochemical quenching coefficient (qP), and the nonphotochemical quenching (NPQ) values were affected little by inoculation with AMF, PSF, or both under non-NaCl treatments. However, plants inoculated with AMF and/or PSF had higher Fv/Fm, qP, and ФPSII values (increased by 72.5–188.1%) than the control under NaCl treatment, but not a higher NPQ value. We concluded that inoculation with AMF or PSF increased nutrient uptake and improved the gas-exchange and Chl fluorescence parameters of beach plum under salt stress environment. These effects could be strengthened by the combination of AMF and PSF, especially for nutrient uptake, root growth, and Pn, thereby alleviating the deleterious effects of NaCl stress on beach plum growth.

Nectarine (Prunus persica var. nectarina) is a sub-tropical fruit tree with strong cold sensitivity. In this study, flesh of nectarine (Shuguang) was used to determine the difference in transcriptional data before and after chilling injury under storage. In addition, genes responses involved in nectarine acclimation to cold stress were also explored. Results of the current study showed that nectarine was found to be more susceptible to chilling injury during storage at 5°C than at 0°C, and differentially expressed genes (DEGs) were concentrated in the late stage of low-temperature storage where chilling injury symptoms appeared at the end of the experiment. The key genes related to low-temperature response were associated with post-harvest biological processes. DEGs were annotated on the metabolic pathways of cold regulation signal transduction, cold resistance physiological metabolism and cold resistance-related protein synthesis. Moreover, the expression of genes related to cold stress such as plant hormone signal transduction element such as Auxin-responsive protein, transcription factors responding to cold stress such as WRKY transcription factor and genes related to maintaining membrane stability and regulating physiological metabolism such as proline dehydrogenase was more pronounced when nectarine was stored at 5°C than at 0°C. Overall, these findings showed that alteration in chilling temperature has substantial impact on the transcription levels associated with cold resistance pathway during the low-temperature storage of nectarine and thus promotes chilling injury disorders in nectarine.

Acute myeloid leukemia (AML) is a type of hematological malignancy with diverse genetic pathogenesis. Identification of the miR-93-5p targeted pathogenic markers could be useful for AML diagnosis and potential therapy. We collected 751 miR-93-5p targeted and AML-related genes by integrating the results of multiple databases and then used the expression profile of TCGA-LAML to construct a coexpression function network of AML WGCNA. Based on the clinical phenotype and module trait relationship, we identified two modules (brown and yellow) as interesting dysfunction modules, which have a significant association with cytogenetics risk and FAB classification systems. GO enrichment and KEGG analysis showed that these modules are mainly involved with cancer-associated pathways, including MAPK signal pathway, p53 signal pathway, JAK-STAT signal pathway, TGF-beta signaling pathway, mTOR signaling pathway, VEGF signaling pathway, both associated with the occurrence of AML. Besides, using the STRING database, we discovered the top 10 hub genes in each module, including MAPK1, ACTB, RAC1, GRB2, MDM2, ACTR2, IGF1R, CDKN1A, YWHAZ, and YWHAB in the brown module and VEGFA, FGF2, CCND1, FOXO3, IGFBP3, GSF1, IGF2, SLC2A4, PDGFBM, and PIK3R2 in the yellow module. The prognosis analysis result showed that six key pathogens have significantly affected the overall survival and prognosis in AML. Interestingly, VEGF with the most significant regulatory relationship in the yellow modules significantly positively correlated with the clinical phenotype of AML. We used qPCR and ELISA to verify miR-93-5p and VEGF expression in our clinical samples. The results exhibited that miR-93-5p and VEGF were both highly expressed in AML.

Background Strongyllodes variegatus (Fairmaire) is a major insect pest of oilseed rape in China. Despite its economic importance, the contribution of its population genetics in the development of any suitable protection control strategy for the management of oilseed rape crops is poorly studied. It is a much urgent need to prevent its spread to the rest of the world. Results Using the sequences of mitochondrial DNA cytochrome c oxidase subunit I (COI) and cytochrome b (Cytb) as genetic markers, we analyzed the population genetic diversity and structure of 437 individuals collected from 15 S. variegatus populations located in different oilseed rape production areas in China. In addition, we estimated the demographic history using neutrality test and mismatch distribution analysis. The high level of genetic diversity was detected among the COI and Cytb sequences of S. variegatus. The population structure analyses strongly suggested three distinct genetic and geographical regions in China with limited gene flow. The Mantel test showed that the genetic distance was greatly influenced by the geographical distance. The demographic analyses showed that S. variegatus had experienced population fluctuation during the Pleistocene Epoch, which was likely to be related to the climatic changes. Conclusion Overall, these results demonstrate that the strong genetic structure of S. variegatus populations in China, which is attributed by the isolation through the geographical distance among populations, their weak flight capacity and subsequent adaptation to the regional ecological conditions.

Objective This study aims to investigate the roles of Sonic hedgehog (Shh) signaling pathway in the occurrence and progression of Myelodysplastic Syndrome (MDS) and further evaluate using jervine as therapeutic strategy for MDS by inhibiting Shh pathway. Methods CD34+ cells from the bone marrow of 53 MDS patients were counted by flow cytometry and isolated by magnetic bead sorting. Shh, Smo, Ptch-1 and Gli-1 (involved in Shh pathway) in CD34+ cells were examined by RT-qPCR. Besides, the relationship between Shh pathway-related genes and the clinical features or prognosis of MDS were analyzed. Further, the effects of jervine on MUTZ-1 cells regarding their proliferation, apoptosis and cell cycle as well as Shh pathway-related gene and protein expression were analyzed. Results Gene expression level of Shh, Gli-1 and Smo was significantly increased in MDS patients. Herein, Smo and Gli-1 were correlated with chromosome karyotype classification and IPSS. MDS patients with high expression of Smo or Gli-1 had a poor prognosis. Jervine inhibited gene and protein expression of Shh, Smo, Ptch-1 and Gli-1. Besides, jervine suppressed the proliferation and promoted the apoptosis of MUTZ-1 cells, as well as inhibited the transition of cells from G1 to S phase. Conclusion Shh signaling pathway of MDS patients is abnormally activated and participated in the occurrence and progression of MDS. Jervine intervention is a potential therapeutic strategy for MDS.

Background : Strongyllodes variegatus (Fairmaire) is a major insect pest of oilseed rape in China. Despite its economic importance, the population genetics of this pest contributing to the development of suitable management and control strategies is poorly known. To understand the population genetics and assess the geographical patterns and genetic structure of S. variegates in China. Using mitochondrial DNA cytochrome c oxidase subunit I and cytochrome b region sequences as genetic markers, we analyzed population genetic diversity and structure from 437 individuals collected in 15 S. variegates populations located in different oilseed rape production areas in China. In addition, we estimated the demographic history using neutrality test and mismatch distribution analysis. Results : The high level of genetic diversity was detected among the mtDNA region sequences of S. variegates . The population structure analysis strongly suggested that three genetic and geographical regions occur with limited gene flow. The Mantel test showed that the genetic distance was greatly influenced by geographical distance. The demographic analyses showed that S. variegates experienced population fluctuation during the Pleistocene, which was likely to be related to the climatic changes. Conclusion : Overall, these results demonstrated that the strong population genetic structure of this beetle may attribute to the geographical barriers and subsequently adapt to the regional ecological conditions for the distribution of S. variegates in China. Keywords : Gene flow, Genetic differentiation, Haplotype, Oilseed rape, Population genetic pattern, Strongyllodes variegates

Background Lavender flowers essential oil had been for a variety of therapeutic and cosmetic purposes, and had been popular for centuries. The previous studies of lavender mainly focused on essential oil composition and extraction methods, ignoring the factors which affected the production of essential oils, such as the floret number. This study aims to get a deeper insight into florets number difference mechanism. Results Hormone profile showed positive correlation between ABA content and the number of florets while IAA was negatively correlated. RNA-Seq results showed that 2848 differentially expressed genes screened by comparing different florets samples in one plant. By analyzing dynamic changes of differentially expressed genes, many potentially interesting genes were identified that encoded putative regulators or key components of ABA metabolism and signaling transduction, such as NCED, PYL, PP2C, SnRK2. These genes were highlighted to reveal their importance in regulation of florets numbers. Conclusions 1. The different ABA concentrations lead to florets difference in the Lavandula angustifolia “JX-2” clusters; 2. ABA may affect the florets number by regulating IAA transport and accumulation. The results will be useful for a better understanding of the molecular mechanism on florets number difference that could be laid the foundation for molecular breeding of muti-flortes varieties.

Abnormality in the number and function of CD4+CD25+FOXP3+ regulatory T cells (Tregs) in peripheral blood has been linked to the initiation and progression of rheumatoid arthritis (RA). Effect of chemokine CCL22 on the number of Tregs in CD4+ T cells and the underlying mechanism were investigated. Downregulation of peripheral Tregs were observed while upregulation of serum chemokine CCL22 in RA patients. Tregs count and the expression of FOXP3 (Tregs function-related maker) and phosphorylated-signal transducer and activator of transcription 5 (p-STAT5) in CD4+ T cells from RA patients were increased while C-C chemokine receptor 4 (CCR4) was decreased by anti-CCL22 antibody, however, recombinant CCL22 resulted in the opposite effects in CD4+ T cells from the healthy control. STAT5 inhibitor significantly reversed the effects of anti-CCL22 antibody. Similarly, sinomenine, an anti-arthritis drug, which decreased CCL22 and CCR4, showed the same trends as the above events, and was reversed by recombinant CCL22 or STAT5 inhibitor. Collectively, anti-CCL22 induced the number of Tregs via STAT5 pathway, leading to expansion of Tregs and subsequently to control of the autoimmune reaction in RA patients. Our study provides s novel strategy for RA treatment.

The ABO blood group is considered to be one of the most important markers in forensic testing. Additionally, autosomal short tandem repeat (STR) genotyping continues to be recognized as the dominan...

Traditional ELISA methods of using animal immunity yield antibodies for detection Cry toxin. Not only is this incredibly harmful to the animals, but is also time-intensive. Here we developed a simple method to yield the recognition element. Using a critical selection strategy and immunoassay we confirmed a clone from the Ph.D-C7C phage library, which has displayed the most interesting Cry1Ab-binding characteristics examined in this study (Fig. 1). The current study indicates that isolating peptide is an alternative method for the preparation of a recognition element, and that the developed assay is a potentially useful tool for detecting Cry1Ab.

Cuticular wax of three Asian pear cultivars, ‘Kuerle’, ‘Xuehua’ and ‘Yuluxiang’ at harvest and after 7 months of storage, was analyzed to determine its chemical composition, crystal morphology, and expression levels of associated genes. The highest cuticular wax concentration was observed in ‘Kuerle’ and the lowest in ‘Xuehua’. The surface wax was mainly composed of alkanes, primary alcohols, terpenoids, fatty acids, and aldehydes. After storage, the total wax concentration at all cultivars decreased, and the wax crystal structures became glossier. ‘Yuluxiang’ fruit showed the strongest resistance to Alternaria rot. Gene expression analysis indicated that four structural genes (CER6, KCS9, KCS20 and FDH1) expressed at higher levels and three genes (CER60, DGAT1 and MAH1) expressed at lower levels in stored fruit were involved in wax synthesis, and the expression levels of two wax transportation genes (LTPG1 and LTP4) and a transcriptional activator (MYB96) were also consistent with the wax concentration of the cultivars. Overall, understanding the differences in the cuticular wax in fruit at harvest and after storage among the cultivars may lead to a better understanding of their contributions to disease resistance and postharvest storage properties.

Pear is one of the most important fruits in the world. In recent years, many new varieties have been bred. However, little is known about these new varieties, including pollen germination, self-(in)compatibility, and the best pollinator for the varieties. In this study, by surveying the length of the pollen tubes that grew into the self styles, pollen germination and self-(in)compatibility of the 127 pear cultivars were determined. All tested pollen germinated on the self stigmas, but the lengths of pollen tube growth into the self styles were different among the pear cultivars. Of these 127 cultivars, 56, 58, and 8 cultivars presented strong, intermediate, and weak self-incompatibility, respectively. Moreover, 5 cultivars presented self-compatibility because their pollen tubes grew to the bottom of the self styles and higher fruit sets with self-pollination were verified in the field. Furthermore, to assign the best pollinator for fruit production and/or new variety breeding, the S-RNase alleles that shared almost identical sequences were integrated together and then re-designated to discern different function-specificity. As a result, the original 68 S-RNase alleles in eastern pear were integrated into 48 re-designated function-specific S-RNase alleles. This integration is promising for assigning the best pollinator for the 36 main pear cultivars in China. Unless the integrated S-RNase alleles, in addition, the S-RNase alleles, which have extremely high identities in amino acid sequences, should be excluded to avoid cross-incompatibility between two parents, leading to poor fruit production and the loss of genetic information in this chromosome

Plant resistance to aphids might be present in different plant tissues, such as the epidermis, mesophyll and phloem, but not all of them play a key role in determining the feeding preference of aphids. In this study, electrically recorded feeding behaviors of cabbage aphids were combined with choice tests and microscopic observations to understand the feeding preference of cabbage aphids on oilseed rape cultivars. The choice tests showed that more cabbage aphids survived on &lsquo, Qianyou18&rsquo, and less on &lsquo, Zhongshuang11&rsquo, compared with the other cultivars. The results of the choice tests were paradoxical with the results analyzed from the general and mesophyll-associated variables. The thick upper epidermis with bushy long trichomes on the leaves of &lsquo, delayed the first probe of the cabbage aphids. The duration of phloem-feeding was similar among the four cultivars although there were differences in the hindrance of the mesophyll. However, salivation was increased when the aphids fed on &lsquo, further indicating that the leaf&rsquo, s physical properties could be important for aphid feeding preference on the four cultivars.

Circulation tumor cells (CTCs) play an important role in metastasis and highly correlate with cancer progression, thus, CTCs could be considered as a powerful diagnosis tool. Our previous studies showed that the number of CTCs could be utilized for recurrence prediction in colorectal cancer (CRC), however, the odds ratio was still lower than five. To improve prognosis in CRC patients, we analyzed CTC clusters/microemboli, CTC numbers, and carcinoembryonic antigen (CEA)/carbohydrate antigen 19-9 (CA19-9) levels using a self-assembled cell array (SACA) chip system for recurrence prediction. In CRC patients, the presence of CTC clusters/microemboli may have higher correlation in metastasis when compared to the high number of CTCs. Additionally, when both the number of CTCs and serum CEA levels are high, very high odds ratios of 24.4 and 17.1 are observed in patients at all stages and stage III of CRC, respectively. The high number of CTCs and CTC clusters/microemboli simultaneously suggests the high chance of relapse (odds ratio 8.4). Overall, the characteristic of CTC clusters/microemboli, CEA level, and CTC number have a clinical potential to enhance CRC prognosis.

Seed treatments with the neonicotinoid insecticides imidacloprid and thiamethoxam were evaluated to determine whether the chemicals at effective concentrations for aphid control would influence the germination and early growth of oilseed rape, Brassica napus. Treatment with imidacloprid or thiamethoxam did not affect the cumulative germination rate, but significantly inhibited establishment potential by suppressing root system development in the cotyledon stage. However, these alterations in seedling development in the thiamethoxam-treated seeds appeared not to be detrimental as leaves developed; in contrast, for the seedlings with imidacloprid as seed treatment agent, a significantly decreased shoot/root ratio was still evident at the late two-leaf stage. After two leaves developed, chlorophyll content per leaf in the thiamethoxam treatment was significantly higher than that of the control, while chlorophyll content per leaf in the imidacloprid treatment remained close to that in the control. Most other parameters, i.e., height, leaf area, weight of stem, leaf or root, and other growth indexes, between the treatments and the control showed no significant difference. Additionally, it was found that storage time of the treated seeds had a significant effect on cumulative germination rate. Treatment 30 d before planting significantly reduced germination relative to that of the control. All of the plants treated with neonicotinoids were shown to have significant anti-aphid characteristics that persisted until the end of the trial.

Na+ distribution is one of the most important strategies for plant resistance to salt stress. The way of Na+ compartmentation in different aged leaves has been controversial, especially at the cell and sub-cellular level. The roles that Na+ and K+/Na+ play the key role in photosynthesis need to be further verified. In this study, using two cucumber cultivars Cucumis sativus L. cv. zhongnong 8 (ZN8, relatively salt tolerant) and Cucumis sativus L.cv. Jinchun 4 (JC4, salt sensitive) as experiment material, we analyzed the mode of ion compartmentation of Na+ in organelles in different aged leaves and determined which factors (the organelles' Na+ or K+/Na+) affect leaf photosynthesis, using high-pressure freezing and freeze-substitution, Ultrathin sectioning technique and X-ray. The main results: 1. The sub-cellular trends of Na+ accumulation was cell wall > vacuole > cytoplasm > chloroplasts; 2. The Na+ accumulation in cytoplasm and chloroplasts was similar in different aged leaves and in seedlings of different salt tolerance cultivars; 3. The K+/Na+ ratio is the main factor that affects the photosynthesis of the same aged leaves in our experiment. A weak capacity for ion compartmentation may be an important reason leading to salt sensitivity.

Human osteosarcoma (OS) represents one of the most common primary sarcomas often originating in the metaphyses of long bones. However, its underlying molecular pathogenesis is still only vaguely understood. Several tight junction proteins were shown to be associated with and involved in tumorigenesis. This study is aimed to evaluate the role of Claudin 8 (CLDN8) in human OS. Lentivirus-based short hairpin RNA targeting CLDN8 specifically depleted its endogenous expression in U2OS and SW1353 OS cells, with a reduction by 97.7% and 89.3%, respectively, in contrast to control. Depletion of CLDN8 led to a significant diminution in cell viability and proliferation. To test the mechanism by which CLDN8 modulates cell proliferation, the flow cytometry assay and apoptosis assay were performed and confirmed that G1-S transition was blocked and a strong proapoptotic effect was induced in U2OS cells by CLDN8 knockdown. These data demonstrate that CLDN8 plays an essential role in OS proliferation in vitro, which will provide a new opportunity for discovering and identifying novel effective treatment strategies.

Breast muscle yield and feed conversion efficiency are the major breeding aims in duck breeding. Understanding the role of specific transcripts in the muscle and small intestine might lead to the elucidation of interrelated biological processes. In this study, we obtained jejunum and breast muscle samples from two strains of Peking ducks that were sorted by feed conversion ratio (FCR) and breast muscle percentage into two-tailed populations. Ten RNA-Seq libraries were developed from the pooled samples and sequenced using the Hiseq2000 platform. We created a reference duck transcript database using de novo assembly methods, which included 16 663 irredundant contigs with an N50 length of 1530 bp. This new duck reference cDNA dataset significantly improved the mapping rate for RNA-Seq data, from 50% to 70%. Mapping and annotation were followed by Gene Ontology analysis, which showed that numerous genes were differentially expressed between the low and high FCR groups. The differentially expressed genes in the jejunum were enriched in biological processes related to immune response and immune response activation, whereas those in the breast muscle were significantly enriched in biological processes related to muscle cell differentiation and organ development. We identified new candidate genes, that is, PCK1, for improving the FCR and breast muscle yield of ducks and obtained much better reference duck transcripts. This study suggested that de novo assembly is essential when applying transcriptome analysis to a species with an incomplete genome.

Most insects must accumulate certain metabolites before entering diapause by virtue of photoperiodic regulation. Photoperiods influence diapause beyond the maternal generation in Cotesia vestalis (Haliday) (Hymenoptera: Braconidae), which is one of the most important larval endoparasitoid of Plutella xylostella (Linnaeus) (Lepidoptera: Plutellidae). The accumulation of metabolites in the non-diapausing prepupae, adults, and eggs (before and after oviposition) in progeny from C. vestalis cultures reared at 25°C under three photoperiods (8:16, 12:12, and 16:8 (L:D) hr), along with diapausing prepupae were measured to investigate the effects of photoperiod on the accumulation of metabolites during diapause induction. Compared with those of non-diapausing prepupae, free water, trehalose, total lipid titer, and total polyol contents in diapausing prepupae showed no significant differences; but weight, bound water, total sugar, glycogen, triglyceride, and protein contents were significantly higher. Und...

Lithium chloride (LiCl) has been used as a mood stabilizer in the manic depressive disorders treatment. Recent studies show that LiCl is also a potent inhibitor for some DNA and RNA viruses. Porcine reproductive and respiratory syndrome virus (PRRSV) is an important viral pathogen in modern pig industry. In this study, we assessed the inhibitory effect of LiCl on PRRSV infection using plaque-formation assay, Q-PCR and Western blot analysis. Our results showed that LiCl could inhibit PRRSV infection in MARC-145 and PAM-CD163 cells. Previous reports have shown that LiCl could induce the Wnt pathway in the absence of Wnt ligands. In our studies, we demonstrated that LiCl activates the Wnt pathway in PRRSV infected cells. Additionally, the knockdown of β-catenin or the Wnt/β-catenin pathway inhibitor PNU74654 was able to reverse the antiviral effect of LiCl, which suggested that the inhibitory effect of LiCl against PRRSV replication might be associated with the activation of the Wnt/β-catenin pathway. We also found that lower viral replication after LiCl treatment was associated with the reduced mRNA levels of pro-inflammatory IL-8, IL-6, IL-1 β, tumor necrosis factor α and decreased NF-κB nuclear translocation. Collectively, our data demonstrated that LiCl inhibited PRRSV infection by enhancing Wnt/β-catenin pathway and suppressing pro-inflammatory responses.

CD163 and sialoadhesin had been reported as the two receptors for porcine reproductive and respiratory syndrome virus (PRRSV) infection. The signaling pathway activated by PRRSV entry was seldom reported. In our studies, we demonstrated that PRRSV entry triggers FAK, PI3K, AKT and Rac1 activation. The signaling pathway FAK-PI3K-AKT-Rac1 is essential for PRRSV entry. Blocking FAK by PF573228 attenuates the activation of PI3K, AKT, Rac1 and the cytoskeleton remodeling induced by virus entry. Inhibitors to FAK, PI3K, AKT and Rac1 can significantly inhibit the virus entry. In conclusion, our observations reveal that PRRSV triggers the activation of FAK-PI3K-AKT-Rac1 signaling pathway to facilitate its entry into cells.

The purpose of this study was to evaluate the correlation between live body measurements and several fat traits in Pekin ducks, and ultimately to formulate multiple regression equations for the in vivo estimation of the carcass fatness of Pekin ducks. Several traits were measured in a total of 208 Pekin ducks aged 6 wk (107 males and 101 females). All ducks were weighed and measured for a set of body measurements including live body weight, body slope length, breast muscle thickness, skin fat thickness, chest width, keel length, and neck length. The breast muscle thickness and skin fat thickness was measured using B-scan sonography. Carcass information, including eviscerated weight, subcutaneous fat with skin weight, and abdominal fat weight, was collected after slaughter. Our results revealed that sex effects on most traits were significant (P < 0.05), and that the weight of subcutaneous fat with skin was significantly correlated with live body weight (r = 0.57 to 0.71, P < 0.01). Four additional traits of males were closely correlated with the weight of subcutaneous fat with skin, namely breast muscle thickness (r = 0.20, P < 0.01), skin fat thickness (r = 0.43, P < 0.01), chest width (r = 0.24, P < 0.01), and neck length (r = 0.20, P < 0.05). The abdominal fat weight, percentage of fat, and percentage of subcutaneous fat with skin of ducks were significantly correlated with live body weight (r = 0.38 to 0.43, P < 0.01), and skin fat thickness (r = 0.38 to 0.49, P < 0.01). These traits provided the basis for constructing regression equations to predict weight (or percentage) of subcutaneous fat and abdominal fat with high values of coefficients of multiple correlation (R) between the dependent variable and the independent variables. Two equations were verified to be applicable in other duck groups, with high accuracy, as more than 80% of estimated values were within the margin of error (

Background Feeding behavior study is important for animal husbandry and production. However, few studies were conducted on the feeding behavior and their relationship with feeding efficiency in Pekin ducks. In order to investigate the feeding behavior and their relationship with feed efficiency and other economic traits in Pekin ducks, we selected 358 male Pekin ducks and recorded feeding information between 3 to 6 wk of age using automatic electronic feeders, and compared the feeding behavior under different residual feed intake (RFI) levels. Results We observed that total feed time, daily feed intake and feed intake per meal had strong positive correlations with feed efficiency traits; moreover, strong correlation between feed intake per meal and body weight was found (R=0.32, 0.36). Daily feeding rate meal and meal duration had weak correlations with feed efficiency (R=0.14~0.15). The phenotypic correlation of between-meal pauses, with feed efficiency was not observed. When daily changes were analyzed, high RFI ducks had the highest feed consumption over all times, and obvious differences in daily visits were found among different RFI level animals during the middle period; these differences were magnified with age, but there was no difference in daily meal number. Moreover, our data indicate that high RFI birds mainly take their meals at the edge of the population enclosure, where they are more susceptible to environmental interference. Conclusions Overall, this study suggests that the general feeding behaviors can be accurately measured using automatic electronic feeders and certain feeding behaviors in Pekin ducks are associated with improved feed efficiency. Electronic supplementary material The online version of this article (10.1186/s40104-017-0212-2) contains supplementary material, which is available to authorized users.

Ethylene response factor (ERF) has been widely studied in regulating fruit ripening in tomato, apple, banana and kiwifruit, but little is known in pear. In this study 1-methylcyclopropene (1-MCP) treatment, an inhibitor of ethylene perception, was conducted at approximately 30 days before harvest to delay fruit ripening in a climacteric white pear cultivar Yali. Transcriptome libraries were constructed and sequenced in pre-ripening, ripening, and 1-MCP treated fruits. Data analysis showed that 73 candidate genes related to fruit ripening were induced by 1-MCP, among which two were positively related, namely 1-aminocyclopropane-1-carboxyla oxidase and an ERF gene (designated as ACO54 and ERF24). Transient transformations in pear fruit revealed that over-expression of ACO54 enhance transcription level of ERF24 and most ripening-related genes. Meanwhile, over-expression of ERF24 raises expression level of ACO54 and partially ripening-related genes. Moreover, dual-luciferase and yeast-one-hybrid assays unravel an interaction between ERF24 and the ACO54 promoter. Therefore, the ERF24 could directly regulate ACO54 expression by binding to its promoter. These results suggested that the first identified ERF24 is involved in regulating fruit ripening in Chinese white pear.

We reported "Transcription Factor SOX9 Promotes Osteosarcoma Cell Growth by Repressing Claudin-8 Expression" in Tohoku J. Exp. Med., 2017, 241 (1), 55-63; doi: 10.1620/tjem.241.55. After publication of the paper, we have become aware of the ethical violation in collecting the samples from some patients. We therefore wish to retract the paper and apologize for any inconvenience caused by the retraction.

Background Numerous studies have demonstrated that long non-coding RNAs (lncRNAs) have many biological functions and play crucial roles in various human cancers, including cancer development, metastasis and prognosis of cancer patients. CCAT2, a novel long non-coding RNA, has been identified as correlating with several different types of cancers. However, the role of lncRNA CCAT2 in gastric cancer (GC) patients is unknown. The purpose of our research was to investigate the function and prognostic significance of lncRNA CCAT2 expression in GC patients. Methods Expression of lncRNA CCAT2 was examined in 208 paired normal and cancerous gastric tissues. Molecular and cellular techniques were used to explore the biological function of lncRNA CCAT2 in GC cells. Kaplan-Meier method and Cox proportional hazards model were used to analyze the prognostic significance of lncRNA CCAT2 expression. Results The results showed that lncRNA CCAT2 was upregulated in GC tissues (P=0.000), and positively correlated with TNM stage (P=0.029), lymphatic invasion (P=0.042) and nervous invasion (P=0.024) in GC patients. Furthermore, we also found that high expression of lncRNA CCAT2 was an unfavorable prognostic factor in GC patients. Silencing of lncRNA CCAT2 inhibits gastric cancer cell proliferation and invasion. Conclusions lncRNA CCAT2 may serve as a tumor promoter and a new predictive prognostic factor for human gastric cancer.

Gastric cancer remains the third leading cause of cancer-related mortality worldwide, and proliferation of gastric cancer represents the major reason for its poor prognosis. Recent evidence indicates that long non-coding RNAs play crucial roles in development and progression of gastric cancer. Long non-coding RNA differentiation antagonizing non-protein coding RNA is upregulated in hepatic cell carcinoma, but the role of lncRNA differentiation antagonizing non-protein coding RNA in gastric cancer has not been explored. In this article, we found that differentiation antagonizing non-protein coding RNA is also upregulated in gastric cancer. Experiments revealed that silencing differentiation antagonizing non-protein coding RNA significantly inhibited gastric cancer cell proliferation in vitro and in vivo. Overexpression of differentiation antagonizing non-protein coding RNA notably increases gastric cancer cell proliferation. From RNA-seq and gene ontology annotations, we found that differentiation antagonizing non-protein coding RNA influences the gene expression programs in cell metabolic and cycle process. Taken together, our findings suggest that the long non-coding RNA differentiation antagonizing non-protein coding RNA promotes the proliferation of gastric cancer and is a potential prognostic biomarker and therapeutic target in gastric cancer.

Sociability is the prerequisite to social living. Oxytocin and the hypothalamo-pituitary-adrenocortical axis mediate various social behaviors across different social contexts in different rodents. We hypothesized that they also mediate levels of non-reproductive social behavior. Here we explored naturally occurring variation in sociability through a social preference test and compared central oxytocin, glucocorticoid receptors, serum adrenocorticotropic hormone and corticosterone in mandarin voles with different levels of sociability. We found that low-social voles showed higher levels of anxiety-like behavior in open field tests, and had more serum adrenocorticotropic hormone and corticosterone than high-social voles. High-social individuals had more glucocorticoid receptor positive neurons in the hippocampus and more oxytocin positive neurons in the paraventricular nuclei and supraoptic nuclei of the hypothalamus than low-social individuals. Within the same level of sociability, females had more oxytocin positive neurons in the paraventricular nuclei and supraoptic nuclei of the hypothalamus than males. These results indicate that naturally occurring social preferences are associated with higher levels of central oxytocin and hippocampus glucocorticoid receptor and lower levels of anxiety and serum adrenocorticotropic hormone and corticosterone.

The effects of an arbuscular mycorrhizal fungus (AMF), Glomus mosseae, Paraglomus occultum and Glomus etunicatum, on the growth and nutrient uptake of the Prunus maritima, cultured with or without NaCl, were evaluated. Plant biomass, AM colonization and spore density were also assessed. Salt stress adversely affected plant N, Ca, Mg, Cu, Zn and Mn nutrient acquisition, except for Fe, resulting in an important reduction in shoot dry biomass. Inoculation of the AM fungus strongly promoted AM colonization and spore density, plant dry biomass, root/shoot dry weight ratio and nutrient uptake by P. maritima, regardless of salinity level. Among the three Glomus species, the total dry biomass of beach plum plants associated with G. mosseae and G. etunicatum was significantly higher than that of the control plants (48 and 43%, respectively), and so is the total leaf area (34 and 33 %, respectively). These findings suggest that inoculation with specific AMF therefore constituted an alternative method to relieve stress of soil salinization on beach plum.

The changes in crude protein, free amino acids, amino acid composition, protein solubility, protein fractionation and protein availability after sprouting of faba bean were investigated. Green and white faba bean were soaked for 20 h followed by germination for 72 h; the results revealed that crude protein and free amino acids in raw faba beans ranged from 8.72 to 10.54% and 0.76 to 1.21 mg/g, respectively. After sprouting, crude protein was decreased and free amino acids were increased. There was an increase in content of valine and phenylalanine amino acids after sprouting. On the other hand, there was a decrease in most of amino acids after sprouting. After sprouting protein solubility was significantly increased. Regarding protein fractions, there was an increase in albumin, globulin, kafirin and glutelin proteins and a decrease in cross linked kafirin and cross linked glutelin after sprouting.

A pair of primers was designed to amplify the propylene alcohol dehydrogenase gene sequence based on the cDNA sequence of the tobacco allyl-alcohol dehydrogenase gene. All introns were sequenced using traditional polymerase chain reaction (PCR) methods and T-A cloning. The sequences from common tobacco (Nicotiana tabaccum L.) and rustica tobacco (Nicotiana rustica L.) were analysed between the third intron and the fourth intron of the propylene alcohol dehydrogenase gene. The results showed that the alcohol dehydrogenase gene is a low-copy nuclear gene. The intron sequences have a combination of single nucleotide polymorphisms and length polymorphisms between common tobacco and rustica tobacco, which are suitable to identify the different germplasms. Furthermore, there are some single nucleotide polymorphism sites in the target sequence within common tobacco that can be used to distinguish intraspecific varieties.

Imidacloprid application, as a seed coating agent on oilseed rape, is recommended to control mustard aphid, Lipaphis erysimi (Kaltenbach) (Hemiptera: Aphididae). In this study, responses of L. erysimi were investigated, including survival, feeding behavior, and detoxifying enzymes, on the oilseed rape seedlings grown from seeds coated with imidacloprid at rates of 6, 12, or 18 g active ingredient (a.i.)/kg seed. The results showed that the aphids&rsquo, survival rate, together with that of the progeny of the survivors, on the seed-treated seedlings significantly decreased. This indicates that the aphid population in fields can be suppressed effectively. The electrical penetration graph (EPG) technique was used to record aphid feeding behaviors on two-, four-, and six-leaf stages of oilseed rape seedlings that had been seed-coated with imidacloprid, and individual responses were revealed during the aphid feeding behavior. On the plants at the two-leaf stage, aphid feeding behaviors were influenced, showing decreased frequency of stylet penetration into the leaf (probe) or into the mesophyll cells (potential drops, pds for short), and shortened duration of stylet event in the leaf (probe) or in the phloem. On the plants at the four- and six-leaf stages, these impacts of imidacloprid were weakened, however, the saliva secretion duration in phloem was shortened to less than 5 min in all imidacloprid treatments. The activity of mixed-function oxidase in aphids maintained on the treated seedlings with imidacloprid was elevated. In conclusion, imidacloprid could be used as a seed coating agent for aphid control, but chemical resistance in aphids should not be ignored.

The dominant-subordinate hierarchy in animals often needs to be established via agonistic encounters and consequently affects reproduction and survival. Differences in brain neuropeptides and sociality among dominant and subordinate males and females remain poorly understood. Here we explore neuropeptide levels and sociality during agonistic encounter tests in mandarin voles. We found that dominant mandarin voles engaged in higher levels of approaching, investigating, self-grooming and exploring behavior than subordinates. Dominant males habituated better to a stimulus vole than dominant females. Dominant males displayed significantly less oxytocin-immunoreactive neurons in the paraventricular nuclei and more vasopressin-immunoreactive neurons in the paraventricular nuclei, supraoptic nuclei, and the lateral and anterior hypothalamus than subordinates. Dominant females displayed significantly more vasopressin-immunoreactive neurons in the lateral hypothalamus and anterior hypothalamus than subordinates. Sex differences were found in the level of oxytocin and vasopressin. These results indicate that distinct parameters related to central nervous oxytocin and vasopressin are associated with behaviors during agonistic encounters in a sex-specific manner in mandarin voles.

In this work, the effects of shallot and leek added to food grains on the available iron and zinc (in vitro) were examined. Two representative cereals and pulses were studied in both raw and cooked condition employing two levels of shallot (25 and 50 g/kg of grain) and leek (150 and 300 g/kg of grain). The enhancing effect of these two spices on in vitro available iron was generally evidenced in the cereals (10.6–67.2% increase) and pulses (11.0–37.8% increase) in both raw and cooked conditions. The two spices similarly enhanced the in vitro available zinc from the food grains, the extent of increase in cereals ranging from 12.4% to 86.1% and in pulses from 9.0% to 45.5%. Thus, both shallot and leek were evidenced here to have a promoting influence on the in vitro available iron and zinc from food grains.

Photoperiods influence diapause beyond the maternal generation in Cotesia vestalis (Haliday) (Hymenoptera: Braconidae). The sizes, 20-hydroxyecdysone (20E), and juvenile hormone III (JH III) contents in the G1 diapausing prepupae, G0 nondiapausing prepupae, adults, and G1 eggs from C. vestalis cultures reared under three photoperiods (8:16 hours light:dark, 12:12 hours light:dark, and 16:8 hours light:dark) were measured to investigate the hormones’ roles on maternal information transmission and diapause regulation. Results showed that the body size of G1 diapausing prepupae was significantly larger than that of G0 nondiapausing prepupae. The sizes of G0 prepupae, female abdomens, and G1 eggs under eight-hour light were significantly larger than those under 16-hour light. The 20E content in diapausing prepupae was significantly lower than that in nondiapausing prepupae, whereas JH III content did not show significantly difference under the same photoperiod. The 20E content in maternal prepupae, mated females and G1 eggs decreased as the light period was reduced. Juvenile hormone III contents in G0-mated females and G1 eggs (after oviposition) under three photoperiods showed no significant differences. These findings suggest that 20E may play a critical role in diapause regulation of C. vestalis, and be used as a maternal environmental message to be transmitted to the next generation.

Most insects must accumulate glycogen before entering diapause. Photoperiod influences diapause beyond the maternal generation in Cotesia vestalis (Haliday) (Hymenoptera: Braconidae). In this study, we measured glycogen content and the activity and messenger RNA (mRNA) expression of glycogen synthase and glycogen phosphorylase at different G0 (25 °C under light:dark photoperiods of 8L:16D, 12L:12D, and 16L:8D) and G1 life stages (13 °C under 8L:16D). Glycogen content in G0 and G1 increased with shorter light periods, except for G0 adult males, which showed no significant difference under the three photoperiods. Compared with those under 16 h, in those under 8 h light, glycogen synthase activity was significantly higher at all tested stages, except for G0 pupa and adult male, for which it was identical; mRNA expression was higher at G0 larva and prepupa, lower at pupa, and identical at rest stages. Glycogen phosphorylase activity was significantly higher for G1 egg, lower at G1 prepupa, and identical at all other stages; mRNA expression was higher at G0 and G1 larval stages, and similar at rest stages. These findings suggest that glycogen, being regulated by the two enzymes, may be a consequential factor in the transmission of maternal information and diapause induction of C. vestalis.

APETALA2/ethylene response factor (AP2/ERF) transcription factor (TF) is a superfamily in plant kingdom, which has been reported to be involved in regulation of plant growth and development, fruit ripening, defense response, and metabolism. As the final response gene in ethylene signaling pathway, AP2/ERF TF could feedback modulate phytohormone biosynthesis, including ethylene, cytokinin, gibberellin, and abscisic acid. Moreover, AP2/ERF TF also participates in response to the signals of auxin, cytokinin, abscisic acid, and jasmonate. Thus, this superfamily is key regulator for connecting the phytohormonal signals. In this review, based on the evidence of structural and functional studies, we discussed the multiple regulator roles of AP2/ERF TF in angiosperm, and then constructed the network model of AP2/ERF TF in response to various phytohormonal signals and regulatory mechanism of the cross-talk.