26,204 results on '"NA"'
Search Results
2. Increased Pass Rates in Introductory Biology: Benefits and Potential Costs of Implementing a Mathematics Prerequisite in a Community College Setting.
- Author
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Kiser SL, Andrews CM, Seidel SB, Fisher MR, Wright NA, and Theobald EJ
- Subjects
- Curriculum, Educational Measurement, Female, Humans, Mathematics, Biology education, Students
- Abstract
We explored the impacts of a mathematics prerequisite on student success in Introductory Biology, focusing on students historically underserved in science, technology, engineering, and mathematics (STEM). Specifically, we studied Introductory Biology student outcomes 5 years before and 6 years after adding the prerequisite. Students who had not previously passed Intermediate Algebra had a 54.91% chance of passing Introductory Biology, compared with a 69.25% chance for students who had passed this math course. Furthermore, we found a disproportionate benefit of passing the math course for Pell Grant recipients. When considering pre- versus post-prerequisite terms of Introductory Biology, we found pass rates were significantly higher after the mathematics prerequisite was required, but grades were not. After the mathematics prerequisite, enrollments in Introductory Biology temporarily decreased in comparison to a similar chemistry course and the college's overall enrollments, a potential cost to students. Pell Grant recipients and women took Introductory Biology at the same rate as before, and contrary to our hypothesis, we saw the proportion of persons excluded due to ethnicity or race (PEER) students enrolled in Introductory Biology was higher after the implementation. This study provides a model for assessing prerequisites in a local context and contributes evidence that mathematical prerequisites can benefit students.
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- 2022
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3. Biosensors Show Promise as a Measure of Student Engagement in a Large Introductory Biology Course.
- Author
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McNeal KS, Zhong M, Soltis NA, Doukopoulos L, Johnson ET, Courtney S, Alwan A, and Porch M
- Subjects
- Humans, Problem-Based Learning, Students, Biology education, Biosensing Techniques, Educational Measurement
- Abstract
This study measured student engagement in real time through the use of skin biosensors, specifically galvanic skin response (GSR), in a large undergraduate lecture classroom. The study was conducted during an intervention in an introductory-level biology course ( N = 420) in which one section of the course was taught with active-learning approaches and the other with traditional didactic teaching. GSR results were aligned and correlated with the Classroom Observation Protocol for Undergraduate STEM, or COPUS, and student self-reflections on their own engagement. Results showed that the active-learning section spent more time working in groups, resulting in GSR measures that trended higher and self-reported engagement, while showing indications of higher content learning gains compared with the traditional lecture section. Comparisons between COPUS scores and GSR readings indicate that engagement increased during group work and decreased during listening activities. Throughout a class period, GSR activity of the active-learning group showed increased trends compared with baseline measures, while the traditional lecture group showed decreased trends. Results indicate that GSR is a promising measure of real-time student engagement in the undergraduate classroom, bringing a new technique to discipline-based education researchers who aim to better measure student engagement; however, some limitations exist for broad-scale implementation.
- Published
- 2020
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4. Fifty years of Theoretical Population Biology.
- Author
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Rosenberg NA
- Subjects
- Anniversaries and Special Events, Biology
- Abstract
The year 2020 marks the 50th anniversary of Theoretical Population Biology. This special issue examines the past and continuing contributions of the journal. We identify some of the most important developments that have taken place in the pages of TPB, connecting them to current research and to the numerous forms of significance achieved by theory in population biology., (Copyright © 2020. Published by Elsevier Inc.)
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- 2020
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5. The 2018 Marcus W. Feldman Prize in Theoretical Population Biology.
- Author
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Rosenberg NA
- Subjects
- Humans, Awards and Prizes, Biology, Population
- Published
- 2018
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6. Human Biology of the Amazon.
- Author
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Silva HP, Piperata BA, and Dufour DL
- Subjects
- Body Size, Brazil, Environment, HIV Infections epidemiology, Humans, Interdisciplinary Studies, Population Dynamics, Public Health, Biology
- Published
- 2016
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7. Theory in population biology, or biologically inspired mathematics?
- Author
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Rosenberg NA
- Subjects
- Humans, Models, Theoretical, Biology, Mathematics
- Published
- 2015
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8. Evolving strategies in mechanobiology to more effectively treat damaged musculoskeletal tissues.
- Author
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Butler DL, Dyment NA, Shearn JT, Kinneberg KR, Breidenbach AP, Lalley AL, Gilday SD, Gooch C, Rao MB, Liu CF, and Wylie C
- Subjects
- Animals, Awards and Prizes, Biomechanical Phenomena, Humans, Spatio-Temporal Analysis, Biology methods, Mechanical Phenomena, Musculoskeletal System injuries
- Abstract
In this paper, we had four primary objectives. (1) We reviewed a brief history of the Lissner award and the individual for whom it is named, H.R. Lissner. We examined the type (musculoskeletal, cardiovascular, and other) and scale (organism to molecular) of research performed by prior Lissner awardees using a hierarchical paradigm adopted at the 2007 Biomechanics Summit of the US National Committee on Biomechanics. (2) We compared the research conducted by the Lissner award winners working in the musculoskeletal (MS) field with the evolution of our MS research and showed similar trends in scale over the past 35 years. (3) We discussed our evolving mechanobiology strategies for treating musculoskeletal injuries by accounting for clinical, biomechanical, and biological considerations. These strategies included studies to determine the function of the anterior cruciate ligament and its graft replacements as well as novel methods to enhance soft tissue healing using tissue engineering, functional tissue engineering, and, more recently, fundamental tissue engineering approaches. (4) We concluded with thoughts about future directions, suggesting grand challenges still facing bioengineers as well as the immense opportunities for young investigators working in musculoskeletal research. Hopefully, these retrospective and prospective analyses will be useful as the ASME Bioengineering Division charts future research directions.
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- 2013
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9. Mapping the surface adsorption forces of nanomaterials in biological systems.
- Author
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Xia XR, Monteiro-Riviere NA, Mathur S, Song X, Xiao L, Oldenberg SJ, Fadeel B, and Riviere JE
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- Adsorption, Surface Properties, Biology, Nanostructures chemistry
- Abstract
The biological surface adsorption index (BSAI) is a novel approach to characterize surface adsorption energy of nanomaterials that is the primary force behind nanoparticle aggregation, protein corona formation, and other complex interactions of nanomaterials within biological systems. Five quantitative nanodescriptors were obtained to represent the surface adsorption forces (hydrophobicity, hydrogen bond, polarity/polarizability, and lone-pair electrons) of the nanomaterial interaction with biological components. We have mapped the surface adsorption forces over 16 different nanomaterials. When the five-dimensional information of the nanodescriptors was reduced to two dimensions, the 16 nanomaterials were classified into distinct clusters according their surface adsorption properties. BSAI nanodescriptors are intrinsic properties of nanomaterials useful for quantitative structure-activity relationship (QSAR) model development. This is the first success in quantitative characterization of the surface adsorption forces of nanomaterials in biological conditions, which could open a quantitative avenue in predictive nanomedicine development, risk assessment, and safety evaluation of nanomaterials., (© 2011 American Chemical Society)
- Published
- 2011
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10. Dissecting cell biology with chemical scalpels.
- Author
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Hathaway NA and King RW
- Subjects
- Animals, Aurora Kinases, Biochemistry methods, Cell Division, Cytoskeleton metabolism, Gene Library, Humans, Phenotype, Proteasome Endopeptidase Complex metabolism, Protein Serine-Threonine Kinases metabolism, Protein Transport, RNA Interference, Ubiquitin metabolism, Biology methods, Models, Biological
- Abstract
Understanding complex cellular processes requires methods for specifically perturbing protein function in a temporally defined fashion. In recent years a variety of chemical tools have been used to study the cytoskeleton and cell division, protein trafficking, and the destruction of proteins by the ubiquitin-proteasome system. The ability to use combinations of reversible inhibitors is proving to be especially helpful in dissecting complex cellular events. Furthermore, the identification of novel inhibitors through unbiased screening approaches is revealing novel drugable steps in important cellular pathways.
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- 2005
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11. [Sufficient numerical size of the sample].
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Plokhinskii NA
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- Biology methods, Statistics as Topic
- Published
- 1982
12. [On biology of Ixodes trianguliceps Bir].
- Author
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NITIKINA NA
- Subjects
- Animals, Biology, Ixodes, Ticks
- Published
- 1960
13. Comparative molecular biology of primates: a review.
- Author
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Barnicot NA
- Subjects
- Amino Acid Sequence, Anatomy, Comparative, Animals, Animals, Laboratory, Blood Proteins analysis, Cytochromes analysis, Electrophoresis, Erythrocytes, Fibrin analysis, Hemoglobins analysis, Humans, Molecular Biology, Myoglobin analysis, Peptides analysis, Biological Evolution, Biology, Polymorphism, Genetic, Primates, Proteins analysis
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- 1969
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14. [On work of the Bureau of the Department of Medical-Biological Sciences for 1960-1961 and problems of scientific-research institutions of the Department in the light of resolutions of the 22d Congress of the Communist Party of the Soviet Union].
- Author
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KRAEVSKII NA
- Subjects
- USSR, Biological Science Disciplines, Biology, Communism, Medicine, Physiology, Work
- Published
- 1962
15. Increased Pre-Lecture Reading and Greater Attendance at a Community College Gateway Science Course
- Author
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Daniel Gertner, Allie Brashears, Na Xu, and Holly Porter-Morgan
- Abstract
Gateway science courses are an ongoing obstacle to recruitment into STEM fields (Science, Technology, Engineering, and Mathematics). Students come into courses that have a high cognitive load, which makes success in the course challenging. Instructional design can be used to reduce cognitive load. The findings demonstrate that leveraging pre- and post-lecture quizzes has the capacity to reduce cognitive load. Over three semesters, assessed 164 students were assessed while taking SCB201 (General Biology I). Students in the participant and control groups were given surveys to gauge the experiment's effectiveness. These surveys were given at the beginning, midterm, and end of the semester. The surveys collected student feedback concerning attendance habits, reading for knowledge, and course difficulty each semester. The participant group findings showed favorable increases in attendance and reading for knowledge. Additionally, students in the participant group found the quizzes helped them to better understand core concepts as the semester progressed. It was determined that these quizzes helped focus learning by causing a decrease in cognitive load for students. This methodology has universal application to any type of course needing to reduce cognitive load.
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- 2024
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16. Developing Students' Scientific Literacy through an E-Portfolio Project at a Community College Gateway Science Course
- Author
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Gertner, Daniel, Xu, Na, Porter-Morgan, Holly, and Brashears, Jacqueline
- Abstract
Gateway science courses are an ongoing obstacle to recruitment into STEM (Science, Technology, Engineering, and Mathematics) fields, in part due to the large gains in vocabulary that are fundamental to scientific literacy. Students also struggle to achieve the technological literacy necessary for a STEM career. We implemented an ePortfolio-based project in 12 sections of General Biology I (n = 164) at an urban community college. This project was designed to aid students at integrating general biology vocabulary around a central topic -- an organism of their choice -- while also increasing their facility in using ePortfolio. We assessed the effectiveness of the project using a set of 17 survey questions, 12 of which were also delivered to control sections. Students responded positively to the project, and the project was effective at increasing scientific literacy and understanding of the technological platform. However, the project did not help students make gains in technological literacy. This project demonstrates that integrating general course-specific vocabulary around a central topic may be useful in helping students succeed in gateway STEM courses.
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- 2023
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17. Water Pollution and Leukemia: A Model for Interdisciplinary Research in the Classroom Experiences Incorporating Effective Pedagogical Approaches for Community College General Biology I Lab Students
- Author
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Xu, Na, Porter-Morgan, Holly, Doran, Nathan, and Keller, Charles
- Abstract
STEM (Science, Technology, Engineering, and Mathematics) education in the United States faces a host of problems including low recruitment and retention in STEM disciplines, under-representation of multiple segments of the US population, and a host of other issues. These problems are well recognized and a variety of solutions are being implemented by interested parties at multiple points along the STEM education pipeline. Incorporating research into STEM classes is an effective way of enhancing student success in STEM education at the undergraduate level. This paper describes the development and implementation of a research-based laboratory module for community college General Biology I lab students that addresses potential relationships between water pollution and cancer while simultaneously implementing established High Impact Practices. This work is part of a larger effort to recruit and retain the next generation of Earth and Environmental Systems engineering students at the undergraduate level. Our inherently interdisciplinary model, which integrates multiple pedagogical elements, can be adapted for implementation in a wide variety of undergraduate STEM courses. This laboratory module allows students to benefit from authentic research, while gaining skills in gathering scientific data, making connections with global and personal issues, and illustrating relevant discipline concepts.
- Published
- 2016
18. A Foundation for STEM Success: A Simple and Successful Microscope Intervention in a General Biology Course at an Urban Community College
- Author
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Keller, Charles, Hendrix, Tonya, Xu, Na, Porter-Morgan, Holly, and Brashears, Allie
- Abstract
A variety of factors contribute to attrition in science, technology, engineering, and mathematics (STEM) education at the community college level including underpreparedness, lack of confidence, and broader socioeconomic issues. This work describes our efforts to improve student learning and overall success in a community college General Biology I lab course through the implementation of microscope clinics specifically designed to improve student microscope skills. We measured the effectiveness of our clinics using pre- and postclinic surveys as well as student performance on a microscope practicum. The majority of targeted students responded positively to the clinics and subsequently performed well on a hands-on microscope practicum. We feel that efforts such as ours can help students master a specific task of relevance to their further studies while simultaneously increasing confidence in their overall STEM "identity," leading to improved performance across their educational landscape.
- Published
- 2018
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19. Proteogenomic insights into the biology and treatment of pan-melanoma.
- Author
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Xiang, Hang, Luo, Rongkui, Wang, Yunzhi, Yang, Bing, Xu, Sha, Huang, Wen, Tang, Shaoshuai, Fang, Rundong, Chen, Lingli, Zhu, Na, Yu, Zixiang, Akesu, Sujie, Wei, Chuanyuan, Xu, Chen, Zhou, Yuhong, Gu, Jianying, Zhao, Jianyuan, Hou, Yingyong, and Ding, Chen
- Subjects
DNA repair ,BIOLOGY ,BRAF genes ,SKIN cancer ,MELANOMA ,MULTIOMICS ,MULTIVARIATE analysis ,T cells - Abstract
Melanoma is one of the most prevalent skin cancers, with high metastatic rates and poor prognosis. Understanding its molecular pathogenesis is crucial for improving its diagnosis and treatment. Integrated analysis of multi-omics data from 207 treatment-naïve melanomas (primary-cutaneous-melanomas (CM, n = 28), primary-acral-melanomas (AM, n = 81), primary-mucosal-melanomas (MM, n = 28), metastatic-melanomas (n = 27), and nevi (n = 43)) provides insights into melanoma biology. Multivariate analysis reveals that PRKDC amplification is a prognostic molecule for melanomas. Further proteogenomic analysis combined with functional experiments reveals that the cis-effect of PRKDC amplification may lead to tumor proliferation through the activation of DNA repair and folate metabolism pathways. Proteome-based stratification of primary melanomas defines three prognosis-related subtypes, namely, the ECM subtype, angiogenesis subtype (with a high metastasis rate), and cell proliferation subtype, which provides an essential framework for the utilization of specific targeted therapies for particular melanoma subtypes. The immune classification identifies three immune subtypes. Further analysis combined with an independent anti-PD-1 treatment cohort reveals that upregulation of the MAPK7-NFKB signaling pathway may facilitate T-cell recruitment and increase the sensitivity of patients to immunotherapy. In contrast, PRKDC may reduce the sensitivity of melanoma patients to immunotherapy by promoting DNA repair in melanoma cells. These results emphasize the clinical value of multi-omics data and have the potential to improve the understanding of melanoma treatment. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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20. Fast tracking alien gene discovery by molecular markers in a late flowering Chinese cabbage-cabbage translocation line ‘AT7–4’
- Author
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Shuxing Shen, Umer Karamat, Shuangxia Luo, Hui Li, Yin Lu, Aixia Gu, Qianyun Wang, Yanhua Wang, Jianjun Zhao, Na Li, Xinpei Zhang, Shuxin Xuan, Rui Yang, Xueping Chen, and Daling Feng
- Subjects
Genetics ,education.field_of_study ,Ecology ,Renewable Energy, Sustainability and the Environment ,Population ,Chromosome ,Chromosomal translocation ,Plant Science ,Vernalization ,Biology ,Biochemistry, Genetics and Molecular Biology (miscellaneous) ,Genome ,Fast tracking ,education ,Gene ,Ecology, Evolution, Behavior and Systematics ,Gene Discovery - Abstract
Flowering time is an important agronomic trait of Chinese cabbage with late flowering being a primary breeding objective. In our previous work, we obtained Chinese cabbage-cabbage translocation lines that contained several beneficial cabbage genes. Cabbage-specific molecular markers show that these genes were coming from chromosome C01 of cabbage. In this study, we investigated the inheritance of flowering time in a couple of translocation lines and analyzed the transmission rate of molecular markers in the offspring. Consequently, we obtained the late flowering Chinese cabbage-cabbage translocation line ‘AT7-4’ in which the flowering time was later than that of ‘85-1’ by about 7 days under 4-week vernalization. Based on previous studies of the genomes of Chinese cabbage and cabbage, we located the cabbage-specific molecular markers that were closely linked at the top of the chromosome A01 in the F2 mapping population generated by self-crossing F1s derived from a cross between the translocation line ‘AT7-4’ and Chinese cabbage ‘14-36’. Five flowering-related genes in the alien fragment were found by functional annotation and their molecular markers were developed. This study lays the foundation for the future improvement of Chinese cabbage varieties using A-C translocation lines.
- Published
- 2023
21. Potential Role of Heme Oxygenase-1 in the Resolution of Experimentally Induced Colitis through Regulation of Macrophage Polarization
- Author
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Won-Ki Kim, Yeonsoo Joe, Jeongmin Park, Young-Joon Surh, Su-Jung Kim, Hun Taeg Chung, Seung Hyeon Kim, Hye-Kyung Na, Ishrat Aklima Muna, Ha-Na Lee, and Shin-Young Gwak
- Subjects
Lipopolysaccharides ,Male ,CD36 ,Macrophage polarization ,Mice ,Animals ,Humans ,Medicine ,Macrophage ,Scavenger receptor ,Colitis ,Efferocytosis ,Hepatology ,biology ,business.industry ,Macrophages ,Dextran Sulfate ,Gastroenterology ,M2 Macrophage ,medicine.disease ,Cell biology ,Mice, Inbred C57BL ,Heme oxygenase ,biology.protein ,business ,Heme Oxygenase-1 - Abstract
Background/aims Heme oxygenase-1 (HO-1) plays a central role in cellular defense against inflammatory insults, and its induction in macrophages potentiates their efferocytic activity. In this study, we explored the potential role of macrophage HO-1 in the resolution of experimentally induced colitis. Methods To induce colitis, male C57BL/6 mice were treated with 2% dextran sulfate sodium (DSS) in the drinking water for 7 days. To investigate efferocytosis, apoptotic colon epithelial CCD 841 CoN cells were coincubated with bone marrow-derived macrophages (BMDMs). Results Administration of the HO-1 inhibitor zinc protoporphyrin IX (ZnPP) blunted the resolution of DSS-induced intestinal inflammation and expression of the proresolving M2 macrophage marker CD206. BMDMs treated with apoptotic colonic epithelial cells showed significantly elevated expression of HO-1 and its regulator Nrf2. Under the same experimental conditions, the proportion of CD206-expressing macrophages was also enhanced. ZnPP treatment abrogated the upregulation of CD206 expression in BMDMs engulfing apoptotic colonic epithelial cells. This result was verified with BMDMs isolated from HO-1-knockout mice. BMDMs, when stimulated with lipopolysaccharide, exhibited increased expression of CD86, a marker of M1 macrophages. Coculture of lipopolysaccharide-stimulated BMDMs with apoptotic colonic epithelial cell debris dampened the expression of CD86 as well as the pro-inflammatory cytokines in an HO-1-dependent manner. Genetic ablation as well as pharmacologic inhibition of HO-1 significantly reduced the proportion of efferocytic BMDMs expressing the scavenger receptor CD36. Conclusions HO-1 plays a key role in the resolution of experimentally induced colitis by modulating the polarization of macrophages.
- Published
- 2022
22. The Role of Eif2s3y in Mouse Spermatogenesis and ESC
- Author
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Wenqing Liu, Na Li, Mengfei Zhang, Jinlian Hua, and Ahmed Hamed Arisha
- Subjects
Eukaryotic translation ,Meiosis ,Spermiogenesis ,Prokaryotic initiation factor-2 ,Structural gene ,Medicine (miscellaneous) ,General Medicine ,Biology ,Y chromosome ,Spermatogenesis ,Gene ,Cell biology - Abstract
Eukaryotic translation initiation factor 2 subunit 3 and structural gene Y-linked (Eif2s3y) gene, the gene encoding eIF2γ protein, is located on the mouse Y chromosome short arm. The Eif2s3y gene is globally expressed in all tissues and plays an important role in regulating global and gene-specific mRNA translation initiation. During the process of protein translation initiation, Eif2s3x (its homolog) and Eif2s3y encoded eIF2γ perform similar functions. However, it has been noticed that Eif2s3y plays a crucial role in spermatogenesis, including spermatogonia mitosis, meiosis, and spermiogenesis of spermatids, which may account for infertility. In the period of spermatogenesis, the role of Eif2s3x and Eif2s3y are not equivalent. Importance of Eif2s3y has been observed in ESC and implicated in several aspects, including the pluripotency state and the proliferation rate. Here, we discuss the functional significance of Eif2s3y in mouse spermatogenesis and self-renewal of ESCs.
- Published
- 2022
23. Effects of low and high levels of nano-selenium on intestinal microbiota of Chinese tongue sole (Cynoglossus semilaevis)
- Author
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Lei Jia, Xiaoxu He, Na Zhao, Chunxiu Chen, and Bo Zhang
- Subjects
0303 health sciences ,Ecology ,biology ,chemistry.chemical_element ,04 agricultural and veterinary sciences ,Aquatic Science ,Acinetobacter ,biology.organism_classification ,Micronutrient ,Bioavailability ,03 medical and health sciences ,chemistry ,Microbial population biology ,Arthrobacter ,040102 fisheries ,medicine ,0401 agriculture, forestry, and fisheries ,Food science ,medicine.symptom ,Weight gain ,Relative species abundance ,Ecology, Evolution, Behavior and Systematics ,Selenium ,030304 developmental biology - Abstract
Nano-selenium (Se) has attracted growing attention due to its high bioavailability, low toxicity and its possible applications in the prevention of oxidative damage in animal tissues. Recent research works have conveyed that the use of nano-seleniumas food additive could have positive effects on the nutrition of aquatic animals.In this study, the intestinal bacterial communities associated with low and high concentrations of nano-selenium in the diet of Chinese tongue sole were characterized, through 16S rRNA V3–V4 sequencing.Samples were derived from fish fed with diet containing different nano-selenium level, 0 mg/kg for the control group, 1.6 mg/kg for low dose group, and 2.4 mg/kg for high dose group The intestinal microbial community structure showed a low overall diversity, among which the vibro genus occupied the most important position with more than 90% relative abundance in all three group. Significant differences in specie diversity occurred between the nano-selenium treated (both low dose [IL] and high dose [LH]) groups and the control group(IC). Acinetobacter, Arthrobacter, and Streptophytes were the top three enriched genera after the treatment with nano-selenium compared to IC. Meantime, the weight gain rate of the LH group was 9% higher than control. The results revealed the effect of nano-selenium on microbial community structure of gut and growth performance of C.semilaevis, Future research exploring the interaction mechanism between micronutrients and the microbial communities would increase our understanding of the fish nutrition.
- Published
- 2022
24. Shape-dependent intracellular uptake of metal–organic framework nanoparticles
- Author
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Young Bin Choy, Seung Ho Lee, Na Kyeong Lee, Chun Gwon Park, Yun Young Lee, Chang Hee Min, and Se-Na Kim
- Subjects
biology ,Chemistry ,General Chemical Engineering ,Nanoparticle ,Biocompatible material ,biology.organism_classification ,Metal ,HeLa ,Cell culture ,visual_art ,visual_art.visual_art_medium ,Biophysics ,Intracellular drug delivery ,Metal-organic framework ,Intracellular - Abstract
Metal–organic framework (MOF) nanoparticles are promising carriers for the internal delivery of therapeutics to the cells; however, the effects of their shape on cellular uptake have not yet been clearly evaluated. Therefore, we synthesized biocompatible Fe-based MOF nanoparticles of two distinct shapes—rods and octahedrons (NH2-MIL-88B(Fe)-ROD and NH2-MIL-88B(Fe)-OCTA, respectively)—and evaluated their cellular uptake kinetics and mechanisms using three different cell lines (HeLa, MDA-MB-231, and L929). Although both nanoparticles possessed the same constituent metal, organic linkers, and thus, crystalline structures, a more rapid uptake was observed with NH2-MIL-88B(Fe)-OCTA, whereas NH2-MIL-88B(Fe)-ROD were endocytosed in a more sustained manner. This could be ascribed to the large number of sharp edges available in NH2-MIL-88B(Fe)-OCTA particles; hence, there were more points of expedited entry into the cells via a clathrin-mediated pathway. The findings herein provide important information for the application of the MOF nanoparticles as intracellular drug delivery carriers, especially when they can be prepared in different shapes with the same composition.
- Published
- 2021
25. Effect of Fractions from Lycopus lucidus Turcz. Leaves on Genomic DNA Oxidation and Matrix Metalloproteinase Activity
- Author
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Sun Young Lim, Eun Na, and Jingwen Chen
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chemistry.chemical_classification ,Reactive oxygen species ,Antioxidant ,biology ,medicine.medical_treatment ,Organic Chemistry ,General Medicine ,DNA oxidation ,biology.organism_classification ,Computer Science Applications ,Nitric oxide ,Blot ,chemistry.chemical_compound ,chemistry ,Griess test ,Drug Discovery ,medicine ,Phorbol ,Lycopus lucidus ,Food science - Abstract
Aim and Objective: We investigated the inhibitory effects of fractions from Lycopus lucidus Turcz. leaves on genomic DNA oxidation, Nitric Oxide (NO) production, and Matrix Metalloproteinase (MMP) activity. Material and Methods: Oxidative damage of genomic DNA was detected after Fenton reaction with H2O2 using DNA electrophoresis. Western blotting was performed to compare the expression levels of MMP-2 in phorbol 12-myristate 13-acetate (PMA)-induced HT-1080 cells. Lipopolysacchride (LPS)-induced NO production in RAW 264.7 cells was measured using Griess reagent. Results: All fractions (n-Hexane, 85% aq. MeOH, n-BuOH, and water fractions) from the leaves of L. lucidus Turcz. significantly inhibited intracellular production of reactive oxygen species (ROS) (p Conclusion: Overall, these results indicated that L. lucidus Turcz. leaves can be exploited as plant based sources of antioxidants in the pharmaceutical, cosmetic, nutraceutical, and food industries.
- Published
- 2022
26. The impact of angiotensin converting enzyme insertion/deletion gene polymorphism on diabetic kidney disease: A debatable issue
- Author
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Wen-li Zeng, Na Song, Shikun Yang, and Fen-fen Chu
- Subjects
medicine.medical_specialty ,Polymorphism, Genetic ,Diabetic kidney ,biology ,Genotype ,business.industry ,Angiotensin-converting enzyme ,Disease ,Peptidyl-Dipeptidase A ,Protective Factors ,Gastroenterology ,Pooled analysis ,Nephrology ,Internal medicine ,medicine ,biology.protein ,Diabetes Mellitus ,Humans ,Diabetic Nephropathies ,Gene polymorphism ,Allele ,Risk factor ,business - Abstract
Objective The objective of this study was to evaluate the influence of ACE I/D gene polymorphisms on diabetic kidney disease (DKD) risk. Methods All eligible investigations were identified, the number of various genotype in the case and control group were reviewed. The pooled analysis was performed using Stata software. Results In overall subjects, 24,321 participants with 12,961 cases and 11,360 controls were included. the pooled analysis showed a significant link between D allele, DD or II genotype and DKD risk (D versus I: OR = 1.316, 95% CI: 1.213–1.427, P = 0.000; DD versus ID + II: OR = 1.414, 95% CI: 1.253–1.595, P = 0.000; II versus DD + ID: OR = 0.750, 95% CI: 0.647–0.869, P = 0.000). The subgroup pooled analysis showed that ACE I/D gene polymorphism was correlated with DKD both in Asian and in Chinese population. In addition, ACE I/D gene polymorphism was correlated with type 2 DKD (D versus I: OR = 1.361, 95% CI: 1.243–1.490, P = 0.000; DD versus ID + II: OR = 1.503, 95% CI: 1.310–1.726, P = 0.000; II versus DD + ID: OR = 0.738, 95% CI: 0.626 –0.870, P = 0.000). However, there was no obvious correlation in Caucasian subjects and type 1 diabetic patients. Conclusion ACE I/D polymorphisms were correlated with DKD in Asian and type 2 diabetic populations. ACE D allele/DD genotype might be a risk factor, while ACE II genotype might be a protective factor for DKD.
- Published
- 2022
27. ROS1-positive non-small cell lung cancer (NSCLC): biology, diagnostics, therapeutics and resistance
- Author
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Zhi-Qiong Yu, Meng Wang, Wen Zhou, Meng-Xia Mao, Yuan-Yuan Chen, Na Li, Xiao-Chun Peng, Jun Cai, and Zhi-Qiang Cai
- Subjects
Lung Neoplasms ,Crizotinib ,Carcinoma, Non-Small-Cell Lung ,Proto-Oncogene Proteins ,Humans ,Pharmaceutical Science ,Protein-Tyrosine Kinases ,Biology ,Protein Kinase Inhibitors - Abstract
ROS1 is a proto-oncogene encoding a receptor tyrosine protein kinase (RTK), homologous to the v - Ros sequence of University of Manchester tumours virus 2 (UR2) sarcoma virus, whose ligands are still being investigated. ROS1 fusion genes have been identified in various types of tumours. As an oncoprotein, it promotes cell proliferation, activation and cell cycle progression by activating downstream signalling pathways, accelerating the development and progression of non-small cell lung cancer (NSCLC). Studies have demonstrated that ROS1 inhibitors are effective in patients with ROS1-positive NSCLC and are used for first-line clinical treatment. These small molecule inhibitors provide a rational therapeutic option for the treatment of ROS1-positive patients. Inevitably, ROS1 inhibitor resistance mutations occur, leading to tumours recurrence or progression. Here, we comprehensively review the identified biological properties and Differential subcellular localisation of ROS1 fusion oncoprotein promotes tumours progression. We summarise recently completed and ongoing clinical trials of the classic and new ROS1 inhibitors. More importantly, we classify the complex evolving tumours cell resistance mechanisms. This review contributes to our understanding of the biological properties of ROS1 and current therapeutic advances and resistant tumours cells, and the future directions to develop ROS1 inhibitors with durable effects.
- Published
- 2022
28. Identification of a lncRNA/circRNA-miRNA-mRNA network to explore the effects of ricin toxin-induced inflammation in RAW264.7 cells
- Author
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Yingshuang Wang, Wensen Liu, Na Xu, Na Zhao, Kaikai Yu, Yan Wang, Haotian Yu, Chengbiao Sun, Mingxin Dong, and Jianxu Zhang
- Subjects
Inflammation ,Messenger RNA ,Competing endogenous RNA ,RNA, Circular ,Ricin ,Biology ,Toxicology ,Long non-coding RNA ,Cell biology ,Proinflammatory cytokine ,Mice ,MicroRNAs ,RAW 264.7 Cells ,Circular RNA ,microRNA ,medicine ,Animals ,Gene Regulatory Networks ,RNA, Long Noncoding ,RNA, Messenger ,medicine.symptom ,Signal transduction - Abstract
Ricin toxin (RT) is a ribosome-inactivating protein derived from the beans of the castor oil plant. Our previous studies have reported that RT can induce the production of inflammatory cytokines and cause inflammatory injury in RAW264.7 cells. In order to explore the various biological processes that long noncoding RNA (lncRNA), circular RNA (circRNA) and micro RNA (miRNA) as endogenous non-coding RNAs (ceRNAs) may participate in the pro-inflammatory mechanism, RT (20 ng/mL) treated and normal RAW264.7 cells were firstly sequenced by RNA-seq. By comparing the differentially expressed genes, we obtained 10 hub genes and enriched the inflammatory-related signaling pathways. Based on our results, we concluded a lncRNA/circRNA-miRNA-mRNA network. Finally, we verified the key genes and pathways by qRT-PCR, WB and ELISA. From the experiment results, an opening MAPK signaling pathway in TNF signaling pathway via TNFR2 was found involved in RT-induced inflammation. This work provides a reference for searching for ceRNA targets or therapeutic drugs in RT-induced inflammatory injury in the future.
- Published
- 2021
29. Gm364 coordinates MIB2/DLL3/Notch2 to regulate female fertility through AKT activation
- Author
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Teng Zhang, Chun-Xiang Zhou, Na-Na Zhang, Liang-Jian Chen, Zi-Bin Wang, Qing-Yuan Sun, Dong Zhang, Cong-Rong Li, Zhen-Bo Wang, Yi-Chun Guan, Xin Wang, Yang Wang, Zheng-Rong Xia, Cui-Lian Zhang, Zhi-Xia Yang, and Yan-Ru Li
- Subjects
biology ,Chemistry ,Cell Biology ,Oocyte ,Transmembrane protein ,Cell biology ,Ubiquitin ligase ,medicine.anatomical_structure ,Cytoplasm ,medicine ,biology.protein ,Receptor ,Molecular Biology ,Integral membrane protein ,Protein kinase B ,Intracellular - Abstract
Many integral membrane proteins might act as indispensable coordinators in specific functional microdomains to maintain the normal operation of known receptors, such as Notch. Gm364 is a multi-pass transmembrane protein that has been screened as a potential female fertility factor. However, there have been no reports to date about its function in female fertility. Here, we found that global knockout of Gm364 decreased the numbers of primordial follicles and growing follicles, impaired oocyte quality as indicated by increased ROS and γ-H2AX, decreased mitochondrial membrane potential, decreased oocyte maturation, and increased aneuploidy. Mechanistically, Gm364 directly binds and anchors MIB2, a ubiquitin ligase, on the membrane. Subsequently, membrane MIB2 ubiquitinates and activates DLL3. Next, the activated DLL3 binds and activates Notch2, which is subsequently cleaved within the cytoplasm to produce NICD2, the intracellular active domain of Notch2. Finally, NICD2 can directly activate AKT within the cytoplasm to regulate oocyte meiosis and quality.
- Published
- 2021
30. Cancer stem cells, radiotherapy and the emergence of resistance: The effect of feedback and reprogramming
- Author
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Kim, Na Yeon
- Subjects
Biology ,Mathematics ,cancer stem cell ,feedback regulation ,mathematical model ,radioresistance ,radiotherapy ,reprogramming - Abstract
There is increasing evidence that cancer stem cells (CSC) are more radioresistant than differentiated cancer cells (DCC). Radiation treatment of solid tumors can induce long-term enrichment of CSC, which can lead to resistance and a loss of sensitivity to radiotherapy. At the same time, radiation-induced reprogramming of DCCs into CSCs has also been observed. Using a mathematical model, we study the dynamics of CSCs and DCCs with reprogramming induced by radiation therapy. We also investigate the effect of feedback on cell division rates together with reprogramming, and renewal probability. We observe that feedback on cell division rates results in long-term enrichment of CSC whereas the effect of feedback on self-renewal probabilities results only in short-term CSC enrichment even when there is reprogramming. In the context of glioblastoma, we find there is an optimal choice of dose fractionation to reduce CSC percentages and tumor sizes.
- Published
- 2019
31. Responses of ramie (Boehmeria nivea L.) to increasing rare earth element (REE) concentrations in a hydroponic system
- Author
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Hermine Huot, Yang Yiming, Rongliang Qiu, Mei-Na Guo, Chang Liu, Jean Louis Morel, Wen-Shen Liu, and Ye-Tao Tang
- Subjects
biology ,Chemistry ,Rare-earth element ,02 engineering and technology ,General Chemistry ,Fractionation ,010402 general chemistry ,021001 nanoscience & nanotechnology ,biology.organism_classification ,01 natural sciences ,Boehmeria ,Tailings ,0104 chemical sciences ,Ramie ,Phytoremediation ,Nutrient ,Geochemistry and Petrology ,Environmental chemistry ,Shoot ,0210 nano-technology - Abstract
A number of studies have focused on the effects of rare earth elements (REEs) on crop plants, while little attention has been paid on how tolerant plant species respond to increasing mixed REE concentrations. In this study, ramie (Boehmeria nivea L.) was exposed to a series of REE concentrations prepared with equimolar mixtures of 16 REEs (i.e. 0, 1.6, 8, 16, 80, 160, 400, 800 μmol/L) in order to explore REE accumulation and fractionation characteristics in ramie and the responses of this plant to mixed REEs. Results show that ramie root and shoot biomasses are unaffected under lower REE concentrations (1.6–80 μmol/L), while the growth of ramie and the uptake of nutrients especially Ca and Mn are largely inhibited under higher REE concentrations (160–800 μmol/L). The P and Mo concentrations in the roots increase with the increasing REE concentrations in the solution, suggestive of an involvement of P and Mo in dealing with the high concentrations of REEs in this plant. The preferential uptake of Ce and heavy REEs (HREEs) and the preferential transport of HREEs within the plant lead to a positive Ce anomaly and a HREE enrichment in ramie leaves. Our study suggests that ramie could be a good candidate for the phytoremediation of heavily REE-contaminated soils (e.g., REE mine tailings in southern China). Our results also shed light on points of taking into account phytoremediation management strategies of REE-contaminated soils (e.g., P and Mo fertilization).
- Published
- 2022
32. Food Safety Risks and Contributing Factors of Cronobacter spp
- Author
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Yizhong Shen, Stephen Forsythe, Xiuting Jiang, Danfeng Zhang, Qingping Wu, Yu Ding, Yingwang Ye, Jumei Zhang, Juan Wang, and Na Ling
- Subjects
medicine.medical_specialty ,Environmental Engineering ,General Computer Science ,Materials Science (miscellaneous) ,General Chemical Engineering ,Energy Engineering and Power Technology ,Virulence ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,Medicine ,Cronobacter ,Intensive care medicine ,Cronobacter species ,biology ,business.industry ,General Engineering ,021001 nanoscience & nanotechnology ,Food safety ,biology.organism_classification ,Pathogenicity ,medicine.disease ,0104 chemical sciences ,Necrotizing enterocolitis ,0210 nano-technology ,business ,Meningitis ,Control methods - Abstract
Cronobacter species are a group of Gram-negative opportunistic pathogens, which cause meningitis, septicemia, and necrotizing enterocolitis in neonates and infants, with neurological sequelae in severe cases. Interest in Cronobacter has increased significantly in recent years due to its high virulence in children. In this review, we summarize the current understanding of the prevalence of Cronobacter species in several important food types. We discuss the response mechanisms enabling persistence in adverse growth conditions, as well as its pathogenicity. We emphasize the food safety concerns caused by Cronobacter and subsequent control methods, and clinical treatments.
- Published
- 2022
33. Tropoelastin improves adhesion and migration of intra-articular injected infrapatellar fat pad MSCs and reduces osteoarthritis progression
- Author
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Yang Huang, Na Liu, Jiajia Chen, Xin Wang, Xiongbo Song, Shuo Meng, Junjun Yang, Zhexiong Tang, Tao Li, Xiaoyuan Gong, Zhenlan Fu, Cheng Chen, Yahan Fan, Liu Yang, Jiangyi Wu, and Pingju Liu
- Subjects
Tropoelastin ,biology ,Infrapatellar fat pad ,QH301-705.5 ,Mesenchymal stem cell ,Biomedical Engineering ,Adhesion ,Vinculin ,Chondrogenesis ,Article ,Cell biology ,Biomaterials ,chemistry.chemical_compound ,chemistry ,Hyaluronic acid ,Osteoarthritis ,biology.protein ,TA401-492 ,Infrapatellar fat pad MSCs ,Biology (General) ,Cell adhesion ,Materials of engineering and construction. Mechanics of materials ,Biotechnology - Abstract
Intra-articular injection of mesenchymal stem cells (MSCs) is a promising strategy for osteoarthritis (OA) treatment. However, more and more studies reveal that the injected MSCs have poor adhesion, migration, and survival in the joint cavity. A recent study shows that tropoelastin (TE) regulates adhesion, proliferation and phenotypic maintenance of MSCs as a soluble additive, indicating that TE could promote MSCs-homing in regenerative medicine. In this study, we used TE as injection medium, and compared it with classic media in MSCs intra-articular injection such as normal saline (NS), hyaluronic acid (HA), and platelet-rich plasma (PRP). We found that TE could effectively improve adhesion, migration, chondrogenic differentiation of infrapatellar fat pad MSCs (IPFP-MSCs) and enhance matrix synthesis of osteoarthritic chondrocytes (OACs) in indirect-coculture system. Moreover, TE could significantly enhance IPFP-MSCs adhesion via activation of integrin β1, ERK1/2 and vinculin (VCL) in vitro. In addition, intra-articular injection of TE-IPFP MSCs suspension resulted in a short-term increase in survival rate of IPFP-MSCs and better histology scores of rat joint tissues. Inhibition of integrin β1 or ERK1/2 attenuated the protective effect of TE-IPFP MSCs suspension in vivo. In conclusion, TE promotes performance of IPFP-MSCs and protects knee cartilage from damage in OA through enhancement of cell adhesion and activation of integrin β1/ERK/VCL pathway. Our findings may provide new insights in MSCs intra-articular injection for OA treatment., Graphical abstract Image 1, Highlights • Tropoelastin promotes adhesion and migration of IPFP MSCs. • Tropoelastin promotes IPFP MSCs survival and adhesion in joint cavity. • Injection of IPFP MSCs in tropoelastin reduces OA progression.
- Published
- 2022
34. Consistent Alterations of Human Fecal Microbes After Transplantation into Germ-free Mice
- Author
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Xing-Ming Zhao, Na L Gao, Yanze Li, Wenming Cao, and Wei-Hua Chen
- Subjects
Physiology ,Fecal bacteriotherapy ,Fecal Microbiota Transplantation ,Biology ,Gut flora ,16S ribosomal RNA ,biology.organism_classification ,Biochemistry ,Phenotype ,Gastrointestinal Microbiome ,Transplantation ,Feces ,Disease Models, Animal ,Computational Mathematics ,Genetics ,Humans ,Animals ,Enterotype ,Germ ,Molecular Biology - Abstract
Fecal microbiota transplantation (FMT) of human fecal samples into germ-free (GF) mice is useful for establishing causal relationships between the gut microbiota and human phenotypes. However, due to the intrinsic differences between human and mouse intestines and the different diets of the two organisms, it may not be possible to replicate human phenotypes in mice through FMT; similarly, treatments that are effective in mouse models may not be effective in humans. In this study, we aimed to identify human gut microbes that undergo significant and consistent changes (i.e., in relative abundances) after transplantation into GF mice in multiple experimental settings. We collected 16S rDNA-seq data from four published studies and analyzed the gut microbiota profiles from 1713 human-mouse pairs. Strikingly, on average, we found that only 47% of the human gut microbes could be re-established in mice at the species level, among which more than 1/3 underwent significant changes (referred to as "variable taxa"). Most of the human gut microbes that underwent significant changes were consistent across multiple human-mouse pairs and experimental settings. Consequently, about 1/3 of human samples changed their enterotypes, i.e., significant changes in their leading species after FMT. Mice fed with a controlled diet showed a lower enterotype change rate (23.5%) than those fed with a noncontrolled diet (49.0%), suggesting a possible solution for rescue. Most of the variable taxa have been reported to be implicated in human diseases, with some recognized as the causative species. Our results highlight the challenges of using a mouse model to replicate human gut microbiota-associated phenotypes, provide useful information for researchers using mice in gut microbiota studies, and call for additional validations after FMT. An online database named FMT-DB is publicly available at http://fmt2mice.humangut.info/#/.
- Published
- 2022
35. A lab-on-a-disc platform based on nickel nanowire net and smartphone imaging for rapid and automatic detection of foodborne bacteria
- Author
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Wuzhen Qi, Xiaoting Huo, Jianhan Lin, Hong Duan, Na Rong, Siyuan Wang, Yingjia Liu, and Lei Wang
- Subjects
Detection limit ,Chromatography ,biology ,Chemistry ,Microfluidics ,Nanowire ,chemistry.chemical_element ,Pathogenic bacteria ,General Chemistry ,biology.organism_classification ,medicine.disease_cause ,Horseradish peroxidase ,Nickel ,Reagent ,biology.protein ,medicine ,Bacteria - Abstract
Foodborne pathogenic bacteria have been considered as a major risk factor for food safety. It is of great significance to carry out in-field screening of pathogenic bacteria to prevent the outbreaks of foodborne diseases. In this study, a portable lab-on-a-disc platform with a microfluidic disc was developed for rapid and automatic detection of Salmonella typhimurium using a nickel nanowire (NiNW) net for effective separation of target bacteria, horseradish peroxidase nanoflowers (HRP NFs) for efficient amplification of biological signals, and a self-developed smartphone APP for accurate analysis of colorimetric images. First, the microfluidic disc was preloaded with reagents and samples and centrifuged to form one bacterial sample column, one immune NiNW column, one HRP NF column, two washing buffer columns and one tetramethylbenzidine (TMB) column, which were separated by air gaps. Then, a rotatable magnetic field was specifically developed to assemble the NiNWs into a net, which was automatically controlled by a stepped motor to successively pass through the sample column for specific capture of target bacteria, the HRP NF column for specific label of target bacteria, the washing columns for effective removal of sample background and non-specific binding NFs, and the TMB column for colorimetric determination of target bacteria. The color change of TMB from colorless to blue was finally analyzed using the smartphone APP to quantitatively determine the target bacteria. This lab-on-a-disc platform could detect Salmonella typhimurium from 5.6 × 101 CFU/20 μL to 5.6 × 105 CFU/20 μL in 1 h with a lower detection limit of 56 CFU/20 μL. The recovery of target bacteria in spiked chicken samples ranged from 97.5% to 101.8%. This portable platform integrating separation, labeling, washing, catalysis and detection onto a single disc is featured with automatic operation, fast reaction, and small size and has shown its potential for in-field detection of foodborne pathogens.
- Published
- 2022
36. HER2 exon 20 insertion mutations in lung adenocarcinoma with leptomeningeal metastasis: a case report and response to poziotinib
- Author
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Jing Qin, Ying Fan, Na Han, and Hongyang Lu
- Subjects
Advanced and Specialized Nursing ,biology ,Bevacizumab ,business.industry ,medicine.medical_treatment ,Immunotherapy ,medicine.disease ,Carboplatin ,Targeted therapy ,chemistry.chemical_compound ,Anesthesiology and Pain Medicine ,Pemetrexed ,Maintenance therapy ,chemistry ,Cancer research ,biology.protein ,medicine ,Adenocarcinoma ,Epidermal growth factor receptor ,business ,medicine.drug - Abstract
Leptomeningeal metastasis (LM) is associated with poor prognosis and represents a terminal event of non-small cell lung cancers (NSCLC). In previous studies, most of LM-patients have detected epidermal growth factor receptor (EGFR) mutation and responded to the third generation of EGFR-tyrosine kinase inhibitor (TKI). This study aimed to report a case of ERBB2 (HER2) exon 20 insertion mutations in the cerebrospinal fluid (CSF) of LM-patient which response to poziotinib. At the beginning, postoperative pathology showed a primary invasive adenocarcinoma with no mutations in EGFR and ROS-1. Pemetrexed plus carboplatin combined with bevacizumab was administered as the first-line followed by bevacizumab alone for continuation maintenance therapy. Targeted therapy and immunotherapy were given after the disease progressed in two months. Subsequently, the patient developed mental symptoms and adenocarcinoma cells were found in the CSF. Next-generation sequencing (NGS) results showed HER2 exon 20 insertion mutations in the primary tissue, CSF and plasma samples. Then, poziotinib was administered and the symptoms improved significantly after 3 days and the progress free survival was nearly 2 months. Therefore, we speculate that the CSF concentration and penetration rate of poziotinib may significantly higher than of other TKIs so that it achieves a higher CSF concentration than standard dosing, and successfully controlled LM. It may provide a new therapeutic option for LM-patient and may be especially who are lung adenocarcinoma with HER2 exon 20 insertion.
- Published
- 2022
37. Spatial distribution and functional analysis define the action pathway of Tim-3/Tim-3 ligands in tumor development
- Author
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Tixiao Wang, Zehua Wang, Zhuanchang Wu, Jie Zhang, Xiaohong Liang, Chunhong Ma, Shuaiya Ma, Siyu Tan, Mengzhen Li, Lifen Gao, Xiaowei Guo, and Na Li
- Subjects
Carcinoma, Hepatocellular ,medicine.medical_treatment ,Cell ,CD8-Positive T-Lymphocytes ,Biology ,Ligands ,Metastasis ,Immune system ,Cancer immunotherapy ,Drug Discovery ,Tumor Microenvironment ,Genetics ,medicine ,Humans ,Hepatitis A Virus Cellular Receptor 2 ,Molecular Biology ,Pharmacology ,Tumor microenvironment ,Liver Neoplasms ,Immunotherapy ,medicine.disease ,Immune checkpoint ,medicine.anatomical_structure ,Tumor progression ,Cancer research ,Molecular Medicine ,Original Article - Abstract
The spatial organization of immune cells within the tumor microenvironment (TME) largely determines the anti-tumor immunity and also highly predicts tumor progression and therapeutic response. Tim-3 is a well-accepted immune checkpoint and plays multifaceted immunoregulatory roles via interaction with distinct Tim-3 ligands (Tim-3L), showing great potential as an immunotherapy target. However, the cell sociology mediated by Tim-3/Tim-3L and their contribution to tumor development remains elusive. Here, we analyzed the spatial distribution of Tim-3/Tim-3L in TME using multiplex fluorescence staining and revealed that despite the increased Tim-3 expression in various tumor-infiltrated lymphocytes, Tim-3(+)CD4(+) cells were more accumulated in parenchymal/tumor region compared with stromal region and exhibited more close association with patient survival. Strikingly, CD4 T cells surrounding Tim-3L(+) cells expressed higher Tim-3 than other cells in cancerous tissues. In vivo studies confirmed that depletion of CD4 T cells completely abrogated the inhibition of tumor growth and metastasis, as well as the functional improvement of CD8 T and NK, mediated by Tim-3 blockade, which was further validated in peripheral lymphocytes from patients with hepatocellular carcinoma. In conclusion, our findings unravel the importance of CD4 T cells in Tim-3/Tim-3L-mediated immunosuppression and provide new thoughts for Tim-3 targeted cancer immunotherapy.
- Published
- 2022
38. Characteristics of traditional Chinese acidic rice soup (rice-acid) prepared with different fermentation methods
- Author
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Na Liu, Likang Qin, Song Miao, and Jihong Pan
- Subjects
biology ,Aroma component ,Nutrition. Foods and food supply ,Ethyl acetate ,food and beverages ,Titratable acid ,Rice-acid ,biology.organism_classification ,Taste substance ,Lactic acid ,chemistry.chemical_compound ,Acetic acid ,chemistry ,Fermentation ,TX341-641 ,Malic acid ,Food science ,Aroma ,Flavor ,Nutrition ,Food Science - Abstract
Rice-acid, a Chinese traditional acidic rice soup (rice-acid), is widely accepted by consumers due to its unique flavor and anti-oxidation, anti-aging and immunity enhancement functions. This study confirmed that L-lactic acid and malic acid were the main organic acids in rice-acid. Low-temperature rice-acid samples produced by enterprises had the highest signal intensity of sour taste. The total content of free amino acids in different fermented rice-acid samples were in the range of 0.003–0.468 mg/g. 42 key volatile flavor compounds were identified in rice-acid. 8 volatile compounds with a higher contribution to the aroma of rice-acid were respectively acetic acid, 1-octen-3-ol, 2-heptanol, ethyl acetate, propyl propionate, hexanal, nonanal, and 2,3-butanedione. The interaction between lactic acid bacteria (3.00 × 103–7.02 × 106 CFU/mL) and yeasts (5.04 × 104–2.25 × 108 CFU/mL) affected the formation of taste and aroma components in rice-acid. The physicochemical characteristics including titratable acidity, pH, reducing sugars, amino acid nitrogen, gamma-aminobutyric acid showed significant differences between low-temperature fermentation samples and high-temperature fermentation samples. In addition, relationships linking all data through Pearson coefficient correlation were also reported. In summary, the study can be used to improve the quality of rice-acid products.
- Published
- 2022
39. Skeletal variation in the early clathrodictyid stromatoporoids of Upper Ordovician and its paleoecological and phylogenetic implications
- Author
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Juwan Jeon, Lin Na, Kun Liang, Qijian Li, and Yuandong Zhang
- Subjects
Genetic inheritance ,Phylogenetic tree ,Benthic zone ,Range (biology) ,Stratigraphy ,Ordovician ,Paleontology ,Zoology ,Biology ,Substrate (marine biology) ,Environmental stress ,Ecology, Evolution, Behavior and Systematics ,Katian - Abstract
This study reports four species belonging to two genera of clathrodictyid stromatoporoids from the Sanqushan Formation (Katian, Upper Ordovician), Changshan County, Zhejiang Province, East China: Clathrodictyon cf. mammillatum (Schmidt), C. plicatum Webby and Banks, C. cf. microundulatum Nestor and Labyrinthodictyon cascum (Webby and Morris). Of these, three species (C. cf. mammillatum, C. plicatum and L. cascum) show a wide range of skeletal variation, representing the variation from the normal skeletal phase to abnormal Ecclimadictyon-like crumpled skeletal phase, especially in the axial part of the columnar growth forms. It is uncertain whether the skeletal variation in early clathrodictyids was the result of environmental stress (such as abrupt sediment influxes that often cause growth interruptions of the stromatoporoids) or genetic inheritance. These characteristics suggest that this group had greater environmental tolerance than the earlier labechiids and increased ecological complexity during Late Ordovician by providing a stable, solid and elevated substrate for the other benthic organisms. This may imply that the labechiids and clathrodictyids are quite different groups, probably independently derived during the early evolution of stromatoporoids.
- Published
- 2022
40. In situ synthesis of red fluorescent gold nanoclusters with enzyme-like activity for oxidative stress amplification in chemodynamic therapy
- Author
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Wenying Mi, Shuang Tang, Na Shao, Hejing Li, and Shaoshi Guo
- Subjects
chemistry.chemical_classification ,biology ,Superoxide ,Cell ,General Chemistry ,Glutathione ,biology.organism_classification ,medicine.disease_cause ,HeLa ,chemistry.chemical_compound ,medicine.anatomical_structure ,Enzyme ,chemistry ,Biochemistry ,biology.protein ,medicine ,Dismutase ,Oxidative stress ,Peroxidase - Abstract
Chemodynamic therapy (CDT) has attracted tremendous interest in cancer therapy because it is independent of oxygen and photoirradiation. However, the therapeutic efficacy of CDT is restricted by insufficient H2O2 levels in tumor cells. Herein, employing endogenous GSH as a template and cationic polymeric chitosan (CS) as crosslinker and stabilizer exhibiting easy cell uptake, red luminescent gold nanoclusters (denoted CS-GSH@AuNCs) were successfully synthesized in HeLa cells. The in situ synthesized CS-GSH@AuNCs exhibited both superoxidase dismutase (SOD) and peroxidase (POD)-like activity, which could promote the production of H2O2 from superoxide anion radicals (O2•−) and then •OH. The combination of GSH elimination and H2O2 elevation boosted the generation of •OH, which could trigger cancer cell apoptosis and death. The enzyme-like activity of CS-GSH@AuNCs could be effectively activated under acidic conditions, and showed a high killing effect on tumor cells but minimal toxicity to normal cells. The developed GSH consumption and •OH promotion theranostic platform is an innovative route for enhanced CDT by the amplification of oxidative stress.
- Published
- 2022
41. Influence of cigarette smoking on oral microbiota in patients with recurrent aphthous stomatitis
- Author
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Kong Weisong, Luo Na, Xue Wang, Wei Zhang, Xuemei Li, Qili Mi, and Qian Gao
- Subjects
Bacteria ,biology ,Microbiota ,Veillonella ,General Medicine ,biology.organism_classification ,Recurrent aphthous stomatitis ,General Biochemistry, Genetics and Molecular Biology ,Cigarette Smoking ,Prevotella melaninogenica ,Microbiology ,Haemophilus parainfluenzae ,RNA, Ribosomal, 16S ,Megasphaera ,Actinomyces naeslundii ,Humans ,Stomatitis, Aphthous ,Bacteroides ,Leptotrichia - Abstract
Recurrent aphthous stomatitis (RAS) is a common recurrent ulcerative disease of the oral mucosa which is closely related to oral microbial composition. However, the specific effect and the mechanism of smoking in RAS are unclear. In this study, 16S rRNA sequencing technology was used to compare the differences in saliva microbial community between 28 non-smoking healthy controls (NSctrl), 31 non-smoking RAS patients (NSras), and 19 smoking RAS patients (Sras). The results showed that the bacterial community diversity in patients with RAS (NSras and Sras) was lower than that of NSctrl. The microbial community in smoking-associated RAS is less diverse and distinct from that of non-smokers. The RAS groups have higher abundance of Veillonella, Rothia, and Sneathia and lower abundance of Bacteroidales, Bacteroides, Wolinella, Moryella, Pyramidobacter, and Christensenellaceae at the genera level. A significantly different abundance of Anaerovorax, Candidatus Endomicrobium, Lactococcus, Sneathia, Veillonella, and Cloacibacterium was observed between the Sras and the NSras group. Notably, there was a significant difference in many species from the genus Prevotella and Treponema between the NSras and the Sras group. Further, the relative abundance of several taxa is correlated with smoking age or frequency, including Megasphaera, Haemophilus, Leptotrichia, and Rothia at the genera level, and Prevotella melaninogenica, Prevotella salivae, Megasphaera micronuciformis, Haemophilus parainfluenzae, Alloprevotella tannerae, Actinomyces naeslundii, Lautropia mirabilis, and Capnocytophaga sputigena at the species level. Among patients with RAS, smoking aggravated the pathways of respiration and human pathogens. Our results suggest that smoking is closely related to changes in the oral microbiota, which may contribute an opposite effect to the pathogenesis of RAS. This study provides new insight and theoretical basis for the cause and pathogenesis of RAS and better prevention and treatment.
- Published
- 2022
42. Insights into the mechanism of Sub3 inhibiting Fusarium moniliforme infection in maize
- Author
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Na Li, Pingping Tian, Bangbang Li, Shan Wei, Yangyong Lyu, Yuansen Hu, Wei Zhang, Haojie Yang, and Shuai-Bing Zhang
- Subjects
Fusarium ,chemistry.chemical_classification ,Reactive oxygen species ,Programmed cell death ,biology ,Secondary metabolite ,biology.organism_classification ,Microbiology ,Spore ,Cell membrane ,Cell wall ,medicine.anatomical_structure ,chemistry ,medicine ,Intracellular ,medicine.drug - Abstract
Fusarium moniliforme (F. moniliforme) and its secondary metabolite fumonisin pose a severe threat to food safety, and searching for effective antimicrobial agents is a focus of current research. In this study, the secondary structure of Sub3 was analyzed by circular dichroism, meanwhile, the inhibition rate of Sub3 against F. moniliforme infection of maize was studied. To explore the possible inhibition mechanisms, morphological and structural changes of spores treated with Sub3 at 0, 1/2MIC and MIC were observed by scanning electron microscopy and transmission electron microscopy; the cell wall integrity, membrane integrity, reactive oxygen species, mitochondrial membrane potential, ATP synthase activity, redox reactions, and the nuclear damage of F. moniliforme were also investigated. The results showed that Sub3 was mostly in the state of random in deionized water, while mainly showed the β-sheet structure in the hydrophobic environment of 50% TFE solution, indicating that Sub3 might generate partial structure deformation when acting on the cell membrane; and its minimum inhibitory concentration (MIC) on F. moniliforme spores was 0.2 g/L. Under the 1/2MIC and MIC, the inhibition rates of Sub3 against F. moniliforme infected maize were 34.3% and 75.6%, respectively. The results of inhibition mechanisms revealed that the defective pathogenicity of F. moniliforme caused by Sub3 was attributed to damages on both the cell wall and the cell membrane, which might upset balance of intracellular redox system and mitochondrial energy metabolism and trigger nucleus damage, ultimately leading to cell death. The results provided direct evidence for inhibition of F. moniliforme infection of maize by Sub3, and useful knowledge applicable for food preservation.
- Published
- 2022
43. OsRAM2 Function in Lipid Biosynthesis Is Required for Arbuscular Mycorrhizal Symbiosis in Rice
- Author
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Ying-Na Liu, Ke-Xin Niu, Bo Sun, Rui Guo, Cheng-Chen Liu, An-Qi Zhu, Ya-Nan Wu, Li Tian, and Bin Wang
- Subjects
Rhizophagus irregularis ,Oryza sativa ,biology ,Physiology ,Inoculation ,fungi ,Mutant ,General Medicine ,biology.organism_classification ,Arbuscular mycorrhiza ,Symbiosis ,Lipid biosynthesis ,Botany ,Agronomy and Crop Science ,Gene - Abstract
Arbuscular mycorrhiza (AM) is a mutualistic symbiosis formed between most land plants and Glomeromycotina fungi. During symbiosis, plants provide organic carbon to fungi in exchange for mineral nutrients. Previous legume studies showed that the required for arbuscular mycorrhization2 (RAM2) gene is necessary for transferring lipids from plants to AM fungi (AMF) and is also likely to play a “signaling” role at the root surface. To further explore RAM2 functions in other plant lineages, in this study, two rice (Oryza sativa) genes, OsRAM2 and OsRAM2L, were identified as orthologs of legume RAM2. Examining their expression patterns during symbiosis revealed that only OsRAM2 was strongly upregulated upon AMF inoculation. CRISPR/Cas9 mutagenesis was then performed to obtain three Osram2 mutant lines (-1, -2, and -3). After inoculation by AMF Rhizophagus irregularis or Funneliformis mosseae, all of the mutant lines showed extremely low colonization rates and the rarely observed arbuscules were all defective, thus supporting a conserved “nutritional” role of RAM2 between monocot and dicot lineages. As for the signaling role, although the hyphopodia numbers formed by both AMF on Osram2 mutants were indeed reduced, their morphology showed no abnormality, with fungal hyphae invading roots successfully. Promoter activities further indicated that OsRAM2 was not expressed in epidermal cells below hyphopodia or outer cortical cells enclosing fungal hyphae but instead expressed exclusively in cortical cells containing arbuscules. Therefore, this suggested an indirect role of RAM2 rather than a direct involvement in determining the symbiosis signals at the root surface. [Formula: see text] The author(s) have dedicated the work to the public domain under the Creative Commons CC0 “No Rights Reserved” license by waiving all of his or her rights to the work worldwide under copyright law, including all related and neighboring rights, to the extent allowed by law, 2022.
- Published
- 2022
44. Phase I study of CAR-T cells with PD-1 and TCR disruption in mesothelin-positive solid tumors
- Author
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Na Tang, Jiaping He, Lianjun Shen, Jing Nie, Meixia Chen, Haoyi Wang, Chen Cheng, Zhenguang Wang, Xun Ye, Yang Liu, Wei Cao, Yan Zhang, Na Li, Xingying Zhang, Qingming Yang, Kaichao Feng, and Han Weidong
- Subjects
Programmed cell death ,biology ,business.industry ,medicine.medical_treatment ,Immunology ,T-cell receptor ,Immunosuppression ,Chimeric antigen receptor ,Infectious Diseases ,Effusion ,Toxicity ,medicine ,biology.protein ,Cancer research ,Immunology and Allergy ,Mesothelin ,business ,human activities ,Mesothelin Positive - Abstract
Programmed cell death protein-1 (PD-1)-mediated immunosuppression has been proposed to contribute to the limited clinical efficacy of chimeric antigen receptor T (CAR-T) cells in solid tumors. We generated PD-1 and T cell receptor (TCR) deficient mesothelin-specific CAR-T (MPTK-CAR-T) cells using CRISPR-Cas9 technology and evaluated them in a dose-escalation study. A total of 15 patients received one or more infusions of MPTK-CAR-T cells without prior lymphodepletion. No dose-limiting toxicity or unexpected adverse events were observed in any of the 15 patients. The best overall response was stable disease (2/15 patients). Circulating MPTK-CAR-T cells peaked at days 7–14 and became undetectable beyond 1 month. TCR-positive CAR-T cells rather than TCR-negative CAR-T cells were predominantly detected in effusion or peripheral blood from three patients after infusion. We further confirmed the reduced persistence of TCR-deficient CAR-T cells in animal models. Our results establish the preliminary feasibility and safety of CRISPR-engineered CAR-T cells with PD-1 disruption and suggest that the natural TCR plays an important role in the persistence of CAR-T cells when treating solid tumors.
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- 2021
45. Beneficial Effects of Macaroni Made with Resistant Starch Type 4 from Unripe Banana and Turmeric Extract on Blood Clinical Chemistry and Gut Microbiota of Healthy Rats
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Natthaporn Devahastin Na Ayudhaya, Sawitree Chiampanichayakul, Singkome Tima, Khanittha Punturee, Atitayaporn Lilakhon, Wongsakan Chuathong, Rujirek Chaiwongsa, Worapong Khaodee, Nutjeera Intasai, Wathinee Phomsakha Na Sakonnakhon, and Ratchada Cressey
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food.ingredient ,biology ,Turmeric extract ,Chemistry ,food and beverages ,Gut flora ,Health benefits ,biology.organism_classification ,food ,Blood chemistry ,Clostridiaceae ,Food science ,Resistant starch ,Regular diet ,Beneficial effects - Abstract
Unripe banana is rich with resistant starch (RS) and this non-processed food confers many health benefits. However, unripe banana is not consumed directly and when cooked its native RS is rendered digestible. We have developed macaroni from chemically modified unripe banana flour (RS4), which maintains their content of resistant starch after being cooked, with and without the supplementation of turmeric extract. We hypothesized that consuming our banana RS4 macaroni would confer beneficial effects on metabolic profiles. Healthy Wistar rats were fed for 6 weeks with cooked banana RS4 macaroni, with and without the turmeric extract supplementation, and compared to rats fed with standard wheat macaroni. No significant physiological differences between groups were observed except rats that consumed banana RS4 macaroni had significantly smaller stomachs (pLachnospiraceae Erysipelotrichaceae and Clostridiaceae. In conclusion, the consumption of banana RS4 macaroni by healthy rats receiving a regular diet improved their blood chemistry profile associated with metabolic syndrome, and the addition of turmeric extract can significantly alter fecal microbiota.
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- 2021
46. Structure modification, antialgal, antiplasmodial, and toxic evaluations of a series of new marine-derived 14-membered resorcylic acid lactone derivatives
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Yue-Xuan Qi, Laura M. Pineda, Na-Na Wu, Yu-Cheng Gu, Mei-Yan Wei, Yan-Wei Wu, Wei-Feng Xu, Carmenza Spadafora, Ling Lu, Michelle Ng, Ji-Yong Zheng, Chang-Yun Wang, and Chang-Lun Shao
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chemistry.chemical_classification ,Natural product ,biology ,010405 organic chemistry ,Stereochemistry ,Substituent ,Aquatic Science ,010402 general chemistry ,Oceanography ,biology.organism_classification ,Cochliobolus lunatus ,01 natural sciences ,Semisynthesis ,0104 chemical sciences ,Acylation ,chemistry.chemical_compound ,chemistry ,Exigua ,Cytotoxicity ,Ecology, Evolution, Behavior and Systematics ,Lactone ,Biotechnology - Abstract
Marine natural products play critical roles in the chemical defense of many marine organisms and are essential, reputable sources of successful drug leads. Sixty-seven 14-membered resorcylic acid lactone derivatives 3–27 and 30–71 of the natural product zeaenol (1) isolated from the marine-derived fungus Cochliobolus lunatus were semisynthesized by chlorination, acylation, esterification, and acetalization in one to three steps. The structures of these new derivatives were established by HRESIMS and NMR techniques. All the compounds (1–71) were evaluated for their antialgal and antiplasmodial activities. Among them, 14 compounds displayed antifouling activities against adhesion of the fouling diatoms. In particular, 9 and 34 exhibited strong and selective inhibitory effects against the diatoms Navicula laevissima and Navicula exigua (EC50 = 6.67 and 8.55 μmol/L), respectively, which were similar in efficacy to those of the positive control SeaNine 211 (EC50 = 2.90 and 9.74 μmol/L). More importantly, 38, 39, and 69–71 showed potent antiplasmodial activities against Plasmodium falciparum with IC50 values ranging from 3.54 to 9.72 μmol/L. Very interestingly, the five antiplasmodial derivatives displayed non-toxicity in the cytotoxicity assays and the zebrafish embryos model, thus, representing potential promising antiplasmodial drug agents. The preliminary structure–activity relationships indicated that biphenyl substituent at C-2, acetonide at positions C-5′ and C-6′, and tri- or tetra-substituted of acyl groups increased the antiplasmodial activity. Therefore, combining evaluation of chemical ecology with pharmacological models will be implemented as a systematic strategy, not only for environmentally friendly antifoulants but also for structurally novel drugs.
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- 2021
47. Biological studies and Molecular identification of Blowfly, Calliphora vicina Rob-Desvoidy (Diptera: Calliphoridae) in the central of Erbil province
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srwa khalil, Srwa hamad, and nabeel mawlood
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calliphora vicina ,biology ,molecular study ,identification ,erbil ,Agriculture - Abstract
This research aimed to study the life cycle and duration of each biological stage of the blow fly Calliphora vicina. Adult specimens were collected from various locations in the Erbil provinces and reared on decaying chicken meat. Each female fly produced between 440 to 620 eggs during her lifetime, laying them in clusters of up to 180 eggs at a time. The larvae feed for three to four days under warm, optimal conditions, with the puparium forming two to three days later. The entire life cycle of this insect is completed in approximately 15 days. Morphologically, the adult fly is robust, dark black-blue in color, about 5-12 mm in length, while the immature stages (1st, 2nd, and 3rd larval instars) are vermiform, creamy-white, and feature a distinct cephaloskeleton and varying body lengths, while the Larva 1: Vermiform, pale yellow, length 1.7-3.4 mm.the slits of posterior spiracles were conducted to gather slightly appeared as one part,. Larva 11 Vermiform, Milky white –pale yellow, length 4.7-7.8 mm.and sometimes absent dorsally, the slits of the posterior spiracles were clearly found and separated in to two lines; . Larva III: The mature larva milky white, reaches a length 14-19 mm. Female: resembles the male but differs by the eyes are an holoptic separated from one another by board frons. The slits of the posterior spiracles were distinctly observed and divided into three lines. Another part of the study focused on identifying the insect using molecular methods, specifically PCR. Species-specific primers were prepared and the COI sequence of samples (550 bp) was aligned using the BLAST program from GenBank (http://blast.ncbi.nlm.nih.gov/) with the submitted accession number PP733158 to compare our amplified sequences with other stored sequences. The BLAST results indicated that the highest identity query sequence was recorded in the NCBI gene bank for insect identification.
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- 2024
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48. Protective Effects of a Novel Lactobacillus brevis Strain with Probiotic Characteristics against Staphylococcus aureus Lipoteichoic Acid-Induced Intestinal Inflammatory Response
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Hyun-Dong Paik, Jun-Hyun Hyun, Won-Ju Kim, and Na-Kyoung Lee
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biology ,medicine.drug_class ,Lactobacillus brevis ,Chemistry ,General Medicine ,medicine.disease_cause ,biology.organism_classification ,Applied Microbiology and Biotechnology ,Anti-inflammatory ,Microbiology ,law.invention ,Probiotic ,Immune system ,law ,Staphylococcus aureus ,medicine ,Extracellular ,Lipoteichoic acid ,Cytotoxicity ,Biotechnology - Abstract
Probiotics can effectively modulate host immune responses and prevent gastrointestinal diseases. The objective of this study was to investigate the probiotic characteristics of Lactobacillus brevis KU15152 isolated from kimchi and its protective potential against intestinal inflammation induced by Staphylococcus aureus lipoteichoic acid (aLTA). L. brevis KU15152 exhibited a high survival rate in artificial gastric and bile environments. Additionally, the adhesion capability of the strain to HT-29 cells was higher than that of L. rhamnosus GG. L. brevis KU15152 did not produce harmful enzymes, such as β-glucuronidase, indicating that it could be used as a potential probiotic. The anti-inflammatory potential of L. brevis KU15152 was determined in HT-29 cells. Treatment with L. brevis KU15152 suppressed the production of interleukin-8 without inducing significant cytotoxicity. The downregulatory effects of L. brevis KU15152 were involved in the suppression of nuclear factor-kappa B activation mediated by the extracellular signal-regulated kinase and Akt signaling pathways. Collectively, these data suggest that L. brevis KU15152 can be used in developing therapeutic and prophylactic products to manage and treat aLTA-induced intestinal damage.
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- 2022
49. Prevalence of Echinococcus Species in Wild Foxes and Stray Dogs in Qinghai Province, China
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Junying Ma, Hao Wu, Xuefei Zhang, Xiongying Zhang, Yayi Guan, Kemei Shi, Yu-fang Liu, Wen Lei, Peizhen Zhan, Qing Zhang, Jianping Cao, Wei Wang, Jia Liu, Xiao Ma, Na Liu, Yujuan Shen, Cai Huixia, and Jing Zhang
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China ,Veterinary medicine ,Echinococcus shiquicus ,Prevalence ,Foxes ,Animals, Wild ,Echinococcus multilocularis ,Feces ,Dogs ,Echinococcosis ,Zoonoses ,Virology ,parasitic diseases ,medicine ,Animals ,Dog Diseases ,Echinococcus granulosus ,biology ,DNA, Helminth ,biology.organism_classification ,medicine.disease ,Echinococcus ,Infectious Diseases ,Parasitic disease ,Parasitology - Abstract
Echinococcosis is a zoonotic parasitic disease that is highly endemic to the Qinghai province of China. Limited data are available on the prevalence of the causal pathogen, Echinococcus spp., in definitive hosts in this region. Thus, the aim of this study was to evaluate the prevalence of Echinococcus spp. in wild foxes and stray dogs in Qinghai province. Five hundred and twenty-eight feces from wild foxes and 277 from stray dogs were collected from 11 counties in the Golog, Yushu, and Haixi prefectures and screened for Echinococcus spp. using copro-DNA polymerase chain reaction (PCR). In total, 5.5% of wild foxes and 15.2% of stray dogs tested positive for Echinococcus spp. The prevalence rates of Echinococcus spp. in wild foxes in Golog, Yushu, and Haixi were 7.3%, 5.2%, and 1.9%, respectively. In stray dogs, these rates were 13.3%, 17.3%, and 0%, respectively. Sequencing analysis determined that Echinococcus multilocularis was the most prevalent species, occurring in 4.0% and 12.6% of wild foxes and stray dogs, respectively. Echinococcus shiquicus was observed in 1.5% of wild foxes and 0.7% of stray dogs. Echinococcus granulosus was observed only in wild dogs, with a prevalence rate of 1.8%. To our knowledge, this is the first report on the prevalence of E. shiquicus in dogs in Qinghai province. The current results improve our understanding of the transmission and dissemination of human echinococcosis and suggest that exposure to the eggs of E. multilocularis harbored by wild foxes and stray dogs may pose a great risk of alveolar echinococcosis to humans in Qinghai province.
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- 2022
50. Systematic screening reveals synergistic interactions that overcome MAPK inhibitor resistance in cancer cells
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Wei Li, Bing Liu, Jilin Dong, Xiaohua Lian, Yu Yu, Libin Xu, Yinying Lu, Na An, Lei Cao, Zhen Xie, Minzhen Tao, Baoxing Yang, Yajie Xu, Qiong Wu, and Baoyu Le
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MAPK/ERK pathway ,genetic interactions ,cancer stemness ,Cancer Research ,Linsitinib ,combinatorial therapy ,mapki resistance ,LGR5 ,Cancer ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Cilengitide ,Biology ,medicine.disease ,chemistry.chemical_compound ,Oncology ,chemistry ,pair-wise sgrna library ,Cancer cell ,medicine ,Cancer research ,Viability assay ,RC254-282 ,Insulin-like growth factor 1 receptor - Abstract
Objective: Effective adjuvant therapeutic strategies are urgently needed to overcome MAPK inhibitor (MAPKi) resistance, which is one of the most common forms of resistance that has emerged in many types of cancers. Here, we aimed to systematically identify the genetic interactions underlying MAPKi resistance, and to further investigate the mechanisms that produce the genetic interactions that generate synergistic MAPKi resistance. Methods: We conducted a comprehensive pair-wise sgRNA-based high-throughput screening assay to identify synergistic interactions that sensitized cancer cells to MAPKi, and validated 3 genetic combinations through competitive growth, cell viability, and spheroid formation assays. We next conducted Kaplan-Meier survival analysis based on The Cancer Genome Atlas database and conducted immunohistochemistry to determine the clinical relevance of these synergistic combinations. We also investigated the MAPKi resistance mechanisms of these validated synergistic combinations by using co-immunoprecipitation, Western blot, qRTPCR, and immunofluorescence assays. Results: We constructed a systematic interaction network of MAPKi resistance and identified 3 novel synergistic combinations that effectively targeted MAPKi resistance (ITGB3 + IGF1R, ITGB3 + JNK, and HDGF + LGR5). We next analyzed their clinical relevance and the mechanisms by which they sensitized cancer cells to MAPKi exposure. Specifically, we discovered a novel protein complex, HDGF-LGR5, that adaptively responded to MAPKi to enhance cancer cell stemness, which was up- or downregulated by the inhibitors of ITGB3 + JNK or ITGB3 + IGF1R. Conclusions: Pair-wise sgRNA library screening provided systematic insights into elucidating MAPKi resistance in cancer cells. ITGB3- + IGF1R-targeting drugs (cilengitide + linsitinib) could be used as an effective therapy for suppressing the adaptive formation of the HDGF-LGR5 protein complex, which enhanced cancer stemness during MAPKi stress.
- Published
- 2022
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