1. Multiple enhancers located in a 1-Mb region upstream of POU3F4 promote expression during inner ear development and may be required for hearing
- Author
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Àlex Robert-Moreno, Krysta Voesenek, Silvia Naranjo, José Luis Gómez-Skarmeta, Hannie Kremer, John Economides, Elisa de la Calle-Mustienes, Berta Alsina, Haris Kokotas, Maria Grigoriadou, Nele Hilgert, Guy Van Camp, Michael B. Petersen, Felipe Moreno, Junta de Andalucía, Ministerio de Educación y Ciencia (España), Oticon Foundation, Universidad Pablo de Olavide, and Consejo Superior de Investigaciones Científicas (España)
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Male ,Embryo, Nonmammalian ,Genetics and epigenetic pathways of disease [NCMLS 6] ,5' Flanking Region ,Xenopus ,DNA Mutational Analysis ,Regulatory Sequences, Nucleic Acid ,Hearing ,Genetics(clinical) ,Genetics (clinical) ,In Situ Hybridization ,Original Investigation ,Genetics ,Gene Expression Regulation, Developmental ,Ear ,Phenotype ,Cell biology ,Pedigree ,medicine.anatomical_structure ,Enhancer Elements, Genetic ,Embryo ,Female ,Functional Neurogenomics [DCN 2] ,Recombinant Fusion Proteins ,POU3F4 protein ,5' flanking region ,Green Fluorescent Proteins ,Biology ,medicine ,otorhinolaryngologic diseases ,Animals ,Humans ,Inner ear ,Enhancer ,Hearing Loss ,Gene ,Transcription factor ,Family Health ,Base Sequence ,Green fluorescent proteins ,biology.organism_classification ,Microscopy, Fluorescence ,POU domain factors ,Ear, Inner ,Recombinant fusion proteins ,POU Domain Factors ,Human medicine ,Otic vesicle ,sense organs ,Proteïnes ,Gene Deletion ,Oïda - Abstract
9 páginas, 4 figuras.-- This article is distributed under the terms of the Creative Commons Attribution Noncommercial License.-- et al., POU3F4 encodes a POU-domain transcription factor required for inner ear development. Defects in POU3F4 function are associated with X-linked deafness type 3 (DFN3). Multiple deletions affecting up to ~900-kb upstream of POU3F4 are found in DFN3 patients, suggesting the presence of essential POU3F4 enhancers in this region. Recently, an inner ear enhancer was reported that is absent in most DFN3 patients with upstream deletions. However, two indications suggest that additional enhancers in the POU3F4 upstream region are required for POU3F4 function during inner ear development. First, there is at least one DFN3 deletion that does not eliminate the reported enhancer. Second, the expression pattern driven by this enhancer does not fully recapitulate Pou3f4 expression in the inner ear. Here, we screened a 1-Mb region upstream of the POU3F4 gene for additional cis-regulatory elements and searched for novel DFN3 mutations in the identified POU3F4 enhancers. We found several novel enhancers for otic vesicle expression. Some of these also drive expression in kidney, pancreas and brain, tissues that are known to express Pou3f4. In addition, we report a new and smallest deletion identified so far in a DFN3 family which eliminates 3.9 kb, comprising almost exclusively the previous reported inner ear enhancer. We suggest that multiple enhancers control the expression of Pou3f4 in the inner ear and these may contribute to the phenotype observed in DFN3 patients. In addition, the novel deletion demonstrates that the previous reported enhancer, although not sufficient, is essential for POU3F4 function during inner ear development., This work was supported by grants from the Spanish Ministry of Education and Science (BFU2007-60042/BMC, Petri PET2007_0158, CSD2007-00008) and Junta de Andalucía (Proyecto de Excelencia CVI-3488) to JLG-S, and the Oticon Foundation (Denmark) to MBP. CABD is institutionally supported by CSIC, Universidad Pablo de Olavide and Junta de Andalucía.
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- 2010