Search

Planktivorous reef-associated fishes provide a significant nutrient input to the reef, linking pelagic and reef environments. Highly mobile and relatively large body-sized fusiliers (Lutjanidae) often dominate reef fish biomass, but their role in ecosystem processes is poorly understood. We therefore combined fish counts and behavioural observations at Lizard Island, Great Barrier Reef, to investigate: (1) the spatial distribution and biology of fusiliers on a lagoonal coral reef system, and (2) how does fusilier behaviour and size distribution change from exposed to sheltered locations. We found higher abundances of large-sized fusiliers (≥ 20 cm total length) on exposed reef sites. Sheltered sites had almost exclusively small individuals (

Piscivory is a key ecological function in aquatic ecosystems, mediating energy flow within trophic networks. However, our understanding of the nature of piscivory is limited; we currently lack an empirical assessment of the dynamics of prey capture and how this differs between piscivores. We therefore conducted aquarium‐based performance experiments, to test the feeding abilities of 19 piscivorous fish species. We quantified their feeding morphology, striking, capturing, and processing behavior. We identify two major functional groups: grabbers and engulfers. Grabbers are characterized by horizontal, long‐distance strikes, capturing their prey tailfirst and subsequently processing their prey using their oral jaw teeth. Engulfers strike from short distances, from high angles above or below their prey, engulfing their prey and swallowing their prey whole. Based on a meta‐analysis of 2,209 published in situ predator–prey relationships in marine and freshwater aquatic environments, we show resource partitioning between grabbers and engulfers. Our results provide a functional classification for piscivorous fishes delineating patterns, which transcend habitats, that may help explain size structures in fish communities., We identify functional groups of piscivorous fishes based on their ability to strike at, capture, and process prey. Also, we show that these groups reflect resource partitioning in aquatic habitats.

As habitats change, highly specialised species may die or be forced to relocate. However, some obligate coral-dwelling damselfishes appear to survive the localized extinction of their primary habitat, branching coral, caused by coral bleaching. To address this apparent paradox, we documented the spatial behaviour of obligate coral-dwellers in relation to habitat quality. Focussing on two obligate coral-dwelling damselfishes (Pomacentrus moluccensis and Chromis viridis), we used KUDs (Kernel Utilisation Distributions) to quantify fishes’ short-term space use (daily 5 min observations across 6 days) and related it to live coral cover and structural complexity derived from 3D photogrammetry. Specifically, we calculated movement extent (95% KUD), core areas (50% KUD) and the temporal consistency of occupied areas across consecutive days. Structural complexity had no effect on space use. The effect of live coral cover was significant but weak and dependent on fish body-size: core areas increased with decreasing live coral cover for large fishes; smaller fishes showed little response. In contrast to weak habitat effects, there were strong differences across sites. At one site, average core areas increased three-fold to 1.1 m2 for P. moluccensis and over 60-fold for C. viridis, from 1.14 m2 to an average core area of 92.34 m2 and a maximum recorded extent of 1471.4 m2. These findings may help explain these fishes’ apparent, unexpected resilience to habitat loss. Obligate coral-dwelling fishes may prefer branching live coral, but their ‘obligate’ dependence may be more flexible and context dependent. As ecosystems reconfigure, plasticity in fine-scale spatial behaviour may be critical for the persistence of fish populations.

Cryptobenthic reef fishes (small, camouflaged, benthic-dwelling fishes) face exceptionally high mortality rates, yet they are the most abundant fishes on coral reefs. To maintain local adult populations in the face of these mortality rates, larval cryptobenthics may have adaptations that limit dispersal. However, the basis for this larval retention is unknown. Here, we compared the body shapes of adult and larval cryptobenthics with those of adult and larval large reef fishes to explore how morphological adaptations may enable cryptobenthic larvae to stay near their natal reefs. We found that while adults and larvae of large reef fishes and adult cryptobenthics display different ‘average’ morphological characteristics (i.e. different locations of the morphospace centroid), they all display a similar range of body shapes (i.e. similar morphospace sizes around their centroids). Larval cryptobenthics, however, exhibit a greatly constrained range of morphologies (occupying less than 20% of the morphospace of any other category). Larval cryptobenthics appear to be limited to a simple body plan, with elongate bodies and small fins. This simple body shape is likely to result in relatively poor swimming abilities, which may limit the ability of cryptobenthic larvae to maintain their position against prevailing currents in the pelagic zone. As such, limited dispersal in cryptobenthic larvae is likely to depend upon behavioural adaptations, such as flow-refuging, to avoid being washed away from their natal reefs.

Australian Research Council; Lizard Island Reef Research Foundation, Grant/Award Number: Lizard Island Doctoral Fellowships to RAM and CJF; James Cook Univeristy, Grant/Award Number: James Cook University Postgraduate Research Schola

The feeding apparatus directly influences a species' trophic ecology. In fishes, our understanding of feeding modes is largely derived from studies of rigid structures (i.e. bones, teeth, gill rakers). A recently described lip innovation, however, highlighted the role of soft anatomy in enabling specialized feeding modes. In this study, we explore whether similar diversification may also occur in the soft anatomy of the buccal cavity. Using four key anatomical traits to classify 19 species (14 genera) of wrasses, we evaluated the relationship between anatomical specialization of the buccal cavity and diet. Our data revealed a previously undocumented anatomical adaptation in the mouths of fairy wrasses (Cirrhilabrus): the mucosa throughout the buccal cavity (i.e. anterior to the pharynx) is packed with goblet cells, enabling it to secrete large quantities of mucus in this region; a new trait that, until now, had not been documented in wrasses. This disparity reflects diet differences, with mucus secretion found only in planktivorous Cirrhilabrus that feed predominantly on amorphous organic material (potentially gelatinous organisms). This suggests a cryptic mucus-based resource partitioning in planktivorous wrasses.

Coral reef ecosystems are at the forefront of biodiversity loss and climate change-mediated transformations. This is expected to have profound consequences for the functioning of these ecosystems. However, assessments of ecosystem function on reefs are often spatially limited, within biogeographic realms, or rely on presumed proxies such as traits. To address these shortcomings and assess the effects of biogeography and fish presence on the critical ecosystem function of macroalgal removal, we used assays of six algal genera across three reef habitats in two biogeographically distinct locations: Little Cayman in the Caribbean and Lizard Island on the Great Barrier Reef (GBR). Patterns of fish feeding and realised ecosystem function were strikingly similar between the two geographic locations, despite a threefold difference in the local diversity of nominally herbivorous fishes, a 2.4-fold difference in the diversity of fishes feeding and differences in the biogeographic history of the two locations. In both regions, a single species dominated the function: a surgeonfish, Naso unicornis, at the GBR location and, surprisingly, a triggerfish, Melichthys niger, at the Caribbean location. Both species, especially M. niger, were relatively rare, compared to other nominally herbivorous fishes, in censuses covering more than 14,000 m2 at each location. Our study provides novel insights into the critical function of macroalgal removal in hyperdiverse coral reef ecosystems, highlighting: (a) that function can transcend biogeographic, taxonomic and historical constraints; and (b) shortcomings in our assumptions regarding fish presence and realised ecosystem function on coral reefs.

Aim: To describe the global biogeography of key herbivorous coral reef fish groups since their presumed origins, using data from both fossil and extant species. Location: Global Cenozoic reefs. Taxon: Acanthuridae (surgeonfishes), Siganidae (rabbitfishes) and Scarini (parrotfishes). Methods: We applied the fossilized birth-death model to build chronograms including a comprehensive sampling of extant species and all the fossil occurrences described for each group. With the resulting chronograms, we built biogeographical models considering the geological changes in reef habitat availability since the ancient Tethys Sea. Finally, we used biogeographical stochastic mappings to trace the routes of colonization of the Atlantic Ocean by lineages in our focal taxa. Results: We found that the Palaeocene-Eocene was a period of significant lineage origination for surgeonfishes and rabbitfishes in the central Tethys Sea with the appearance of ancient genera. Most of these genera were probably extinct by the Eocene-Oligocene boundary as they do not correspond with modern taxa. Parrotfishes, however, originated in the early Oligocene, an epoch that corresponds with the geographical transition of the marine biodiversity hotspot. In all groups, extant genera had similar origin times and all expanded in the Miocene, mainly in the Indo-Pacific. In the Atlantic, only one parrotfish lineage with Tethyan ancestry appears to have survived. It subsequently gave rise to extant endemic genera (Sparisoma and Cryptotomus). The other extant lineages in the Atlantic all have Indo-Pacific origins and colonized more recently using different dispersal pathways. Main conclusions: The Indo-Pacific herbivorous fish fauna is the result of ongoing lineage expansion that started in the central Tethys. The Atlantic is a composite fauna with just one endemic lineage and at least four colonization events from the Indo-Pacific.

Piscivory is a significant ecosystem function on coral reefs, with up to 53% of species on reefs being regarded as piscivorous. Despite this ecological importance, the species that contribute to this function have not been assessed in a broad comparative, morphological context. We therefore conducted a morphological assessment of piscivorous coral reef fishes based on a comparative analysis of 119 species, linking morphology with ecological traits (habitat and activity). After accounting for phylogenetic relationships, we found that head length, premaxilla–maxilla (pmx–mx) length, body depth, and eye size mark the primary axis of variation among species. Pmx–mx length is strongly correlated with both vertical and horizontal gape size. We identify three distinct ecomorphotypes: diurnal benthic, nocturnal, and pelagic piscivores. Benthic diurnal and nocturnal piscivores display a wide array of pmx–mx lengths, potentially reflecting the large array of prey sizes and shapes in benthic habitats. This diversity highlights the potential for niche partitioning based on maximum ingestible prey sizes. By comparison, pmx–mx lengths in pelagic piscivores are more restricted, suggesting limited variance in prey sizes or restrictions associated with their feeding mode. Fin shape was also a primary driver of variation between benthic and pelagic predators. The ecomorphotype of nocturnal piscivores suggests that although they are benthic-associated during daytime, these forms leave the reef at night to feed in more open habitats. When analyzing diurnal benthic piscivores alone, we found a major axis of variation between deep-bodied piscivores with large gapes and large head lengths versus fusiform piscivores with high fin aspect ratio values. This continuum appears to describe the relative strength of benthic associations. Overall, we provide a broad quantitative framework for understanding the morphology and potential functions of piscivorous fishes on coral reefs.

1. Globally, many ecosystems are being challenged and transformed by anthropogenic climate change. Future ecosystem configurations will be heavily influenced by the critical ecological functions that affect resilience. Robust measures of these functions will thus be essential for understanding and responding to ecological change. 2. Coral reefs are experiencing unprecedented ecological change due to global mass coral bleaching. After bleaching events and other disturbances, herbivorous fishes provide functions that are critical for reef resilience by controlling harmful proliferation of algae. Identifying functional diversity amongst herbivorous fishes has been a mainstay of reef fish research, but it has remained unclear how, and to what extent, functional diversity translates to functional impacts on reefs. 3. Rather than assessing the functional potential of the herbivorous fish community, we explicitly considered the delivery of herbivory to the reef by quantifying, in unprecedented detail, the spatial extent and overlap of feeding areas across different functional groups. Core feeding areas were highly concentrated and consistently covered just 14% of available reef space. Overlap across functional groups was limited, showing high spatial complementarity as functional groups tended to feed next to one another. Thus, the delivery of critical ecosystem processes was patchy, effectively reducing functional redundancy, even in the presence of a diverse fish assemblage. 4. Our findings caution against assumptions of spatial homogeneity in the delivery of critical ecosystem functions. The functional impact of local herbivorous fish assemblages in current approaches may be overestimated, potentially leading to skewed assessments of reef resilience. Our results highlight the need to incorporate collective animal behaviour and spatio-temporal scales into future assessments of ecosystem functions and ultimately ecological resilience.

Thermal-stress events have changed the structure, biodiversity, and functioning of coral reefs. But how these disturbances affect the dynamics of individual coral colonies remains unclear. By tracking the fate of 1069 individual Acropora and massive Porites coral colonies for up to 5 years, spanning three bleaching events, we reveal striking genus-level differences in their demographic response to bleaching (mortality, growth, and recruitment). Although Acropora colonies were locally extirpated, substantial local recruitment and fast growth revealed a marked capacity for apparent recovery. By contrast, almost all massive Porites colonies survived and the majority grew in area; yet no new colonies were detected over the 5 years. Our results highlight contrasting dynamics of boom-and-bust vs. protracted declines in two major coral groups. These dangerous demographics emphasise the need for caution when documenting the susceptibility and perceived resistance or recovery of corals to disturbances.

Spatial subsidies increase local productivity and boost consumer abundance beyond the limits imposed by local resources. In marine ecosystems, deeper water and open ocean subsidies promote animal aggregations and enhance biomass that is critical for human harvesting. However, the scale of this phenomenon in tropical marine systems remains unknown. Here, we integrate a detailed assessment of biomass production in 3 key locations, spanning a major biodiversity and abundance gradient, with an ocean-scale dataset of fish counts to predict the extent and magnitude of plankton subsidies to fishes on coral reefs. We show that planktivorous fish-mediated spatial subsidies are widespread across the Indian and Pacific oceans and drive local spikes in biomass production that can lead to extreme productivity, up to 30 kg ha−1 day−1. Plankton subsidies form the basis of productivity “sweet spots” where planktivores provide more than 50% of the total fish production, more than all other trophic groups combined. These sweet spots operate at regional, site, and smaller local scales. By harvesting oceanic productivity, planktivores bypass spatial constraints imposed by local primary productivity, creating “oases” of tropical fish biomass that are accessible to humans., How do tropical oceans sustain high productivity and intense coastal fisheries despite occurring in nutrient-poor oceans? This study shows that spatial subsidies dramatically increase local coral reef productivity across the globe, producing localized ‘sweet-spots’ of concentrated, exceptionally high productivity.

One of the most prominent features of life on Earth is the uneven number of species across large spatial scales. Despite being inherently linked to energetic constraints, these gradients in species richness distribution have rarely been examined from a trophic perspective. Here we dissect the global diversity of over 3,600 coral reef fishes to reveal patterns across major trophic groups. By analyzing multiple nested spatial scales, we show that planktivores contribute disproportionally to the formation of the Indo-Australian Archipelago (IAA) marine biodiversity hotspot. Besides being “hotter” at the hotspot, planktivorous fishes display the steepest decline in species numbers with distance from the IAA when compared to other trophic groups. Surprisingly, we did not detect differences in diversification, transition, and dispersal rates in extant species phylogenies that would explain this remarkable gradient in planktivorous fish richness. Thus, we identify two potential complementary drivers for this pattern. First, exceptional levels of partitioning among planktivorous coral reef fishes were driven by temporally stable oceanographic conditions and abundant planktonic resources in the IAA. Second, extinctions of planktivores outside the IAA have been particularly pronounced during Quaternary climate fluctuations. Overall, our results highlight trophic ecology as an important component of global species richness gradients.

Evolution via natural selection has continually shaped the coloration of numerous organisms. One coloration of particular importance is the eyespot: a phylogenetically widespread, conspicuous marking that has been shown to effectively reduce predation, often through its resemblance to the eye. Although widely studied, most research has been experimental in nature. We approach eyespots using a comparative phylogenetic framework that is global in scope. Herein, we identify the potential drivers of eyespot evolution in coral reef fishes; essentially the rules that govern their appearance in this group of organisms. We surveyed 2664 reef fish species (42% of all described reef fish species) and found that eyespots are present in approximately one in every 10 species. Most eyespots occur in closely related species and have been present in some families for over 50 million years. Focusing on damselfishes (family: Pomacentridae) as a study group, we reveal that eyespots are rare in planktivorous species, which is likely driven by the predation risk associated with their feeding location. Using a heatmapping technique, we also show that the location of eyespots is fundamentally different in active fishes that swim above the benthos vs. cryptobenthic fishes that rest on the benthos. These location differences may reflect different functions of eyespots among reef fish species.

Revealing the determinants of virome composition is central to placing disease emergence in a broader evolutionary context. Fish are the most species-rich group of vertebrates and so provide an ideal model system to study the factors that shape virome compositions and their evolution. We characterised the viromes of 19 wild-caught species of marine fish using total RNA sequencing (meta-transcriptomics) combined with analyses of sequence and protein structural homology to identify divergent viruses that often evade characterisation. From this, we identified 25 new vertebrate-associated viruses and a further 22 viruses likely associated with fish diet or their microbiomes. The vertebrate-associated viruses identified here included the first fish virus in the Matonaviridae (single-strand, negative-sense RNA virus). Other viruses fell within the Astroviridae, Picornaviridae, Arenaviridae, Reoviridae, Hepadnaviridae, Paramyxoviridae, Rhabdoviridae, Hantaviridae, Filoviridae and Flaviviridae and were sometimes phylogenetically distinct from known fish viruses. We also show how key metrics of virome composition – viral richness, abundance and diversity – can be analysed along with host ecological and biological factors as a means to understand virus ecology. Accordingly, these data suggest that that the vertebrate-associated viromes of the fish sampled here are predominantly shaped by the phylogenetic history (i.e. taxonomic order) of their hosts, along with several biological factors including water temperature, habitat depth, community diversity and swimming behaviour. No such correlations were found for viruses associated with porifera, molluscs, arthropods, fungi and algae, that are unlikely to replicate in fish hosts. Overall, these data indicate that fish harbour particularly large and complex viromes and the vast majority of fish viromes are undescribed.

Revealing the determinants of virome composition is central to placing disease emergence in a broader evolutionary context. Fish are the most species-rich group of vertebrates and so provide an ideal model system to study the factors that shape virome compositions and their evolution. We characterized the viromes of nineteen wild-caught species of marine fish using total RNA sequencing (meta-transcriptomics) combined with analyses of sequence and protein structural homology to identify divergent viruses that often evade characterization. From this, we identified twenty-five new vertebrate-associated viruses and a further twenty-two viruses likely associated with fish diet or their microbiomes. The vertebrate-associated viruses identified here included the first fish virus in the

Mass coral bleaching is challenging today's coral reefs. However, our understanding of dynamics in benthic space holders, following such disturbances, is limited. To address this, we quantified successional dynamics of the ascidian, Didemnum cf. molle using a series of temporally and spatially matched photoquadrats across both the 2016 and 2017 mass coral bleaching events on the Great Barrier Reef. Unlike corals, D. cf. molle appeared to flourish in the warm temperatures and rapidly expanded. Indeed, colony density increased nearly 6-fold over two years with one quadrat experiencing an increase of over 1000 ind. m−2. However, this increase did not simply track the increase in space due to coral mortality, but may have benefitted from reduced predation or increased nutrient availability following mass coral mortality. This study highlights the potential for D. cf molle to expand under bleaching conditions and to become a more prominent component of future reef configurations.

Reef fishes are an exceptionally speciose vertebrate assemblage, yet the main drivers of their diversification remain unclear. It has been suggested that Miocene reef rearrangements promoted opportunities for lineage diversification, however, the specific mechanisms are not well understood. Here, we assemble near-complete reef fish phylogenies to assess the importance of ecological and geographical factors in explaining lineage origination patterns. We reveal that reef fish diversification is strongly associated with species’ trophic identity and body size. Large-bodied herbivorous fishes outpace all other trophic groups in recent diversification rates, a pattern that is consistent through time. Additionally, we show that omnivory acts as an intermediate evolutionary step between higher and lower trophic levels, while planktivory represents a common transition destination. Overall, these results suggest that Miocene changes in reef configurations were likely driven by, and subsequently promoted, trophic innovations. This highlights trophic evolution as a key element in enhancing reef fish diversification., Both geography and ecology can drive the origins of new species. Siqueira et al. show how geological changes in the structure of Miocene reefs and the concurrent evolution of new feeding strategies combine to explain why coral reefs contain such a diversity of fish species.

The inherent complexity of high-diversity systems can make them particularly difficult to understand. The relatively recent introduction of functional approaches, which seek to infer ecosystem functioning based on species' ecological traits, has revolutionized our understanding of these high-diversity systems. Today, the functional structure of an assemblage is widely regarded as a key indicator of the status or resilience of an ecosystem. Indeed, functional evaluations have become a mainstay of monitoring and management approaches. But is the heavy focus on broad metrics of functional structure grounded in empirical research? On tropical coral reefs, the ocean's most diverse ecosystems, remarkably few studies directly quantify ecosystem functions and the term 'function' is widely used but rarely defined, especially when applied to reef fishes. Our review suggests that most 'functional' studies do not study function as it relates to ecological processes. Rather, they look at easy-to-measure traits or proxies that are thought to have functional significance. However, these links are rarely tested empirically, severely limiting our capacity to extend results from community structure to the dynamic processes operating within high-diversity ecosystems such as coral reefs. With rapid changes in global ecosystems, and in their capacity to deliver ecosystem services, there is an urgent need to understand and empirically measure the role of organisms in various ecosystem functions. We suggest that if we are to understand and manage transitioning coral reefs in the Anthropocene, a broad definition of the word 'function' is needed along with a focus on ecological processes and the empirical quantification of functional roles. In this review, we propose a universal operational definition of the term 'function' that works from a cellular to a global level. Specifically, it is the movement or storage of energy or material. Within this broad definitional framework, all functions are part of a continuum that is tied together by the process-based unifier of material fluxes. With this universal definition at hand, we then present a path forward that will allow us to fully harness the power of functional approaches in understanding and managing high-diversity systems such as coral reefs. A plain language summary is available for this article.

Signal divergence is an important process underpinning the diversification of lineages. Research has shown that signal divergence is greatest in species pairs that possess high geographic range overlap. However, the influence of range-size differences within pairs is less understood. We investigated how these factors have shaped signal divergence within brightly coloured coral reef butterflyfishes (genus: Chaetodon). Using a novel digital imaging methodology, we quantified both colouration and pattern using 250 000 sample points on each fish image. Surprisingly, evolutionary age did not affect colour pattern dissimilarity between species pairs, with average differences arising in just 300 000 years. However, the effect of range overlap and range symmetry was significant. Species-pair colour patterns become more different with increasing overlap, but only when ranges are similar in size. When ranges differ markedly in area, species-pair colour patterns become more similar with increasing overlap. This suggests that species with small ranges may maintain non-colour-based species boundaries.

Few studies have attempted to understand how fish growth scales at community and macroecological levels. This study evaluated the drivers of reef fish growth across a large gradient of environmental variables and a range of morphological and behavioural traits. We compiled Von Bertalanffy Growth parameters for reef fishes and standardized K relative to species maximum sizes, obtaining K-max. We then modelled the response of K-max to body size, diet, body shape, position relative to the reef, schooling behaviour, sea surface temperature, pelagic net primary productivity and ageing method, while accounting for phylogenetic structure in the data. The final model explained 61.5% of the variation in K-max and contained size, temperature, diet, method and position. Body size explained 64% of the modelled K-max variability, while the other variables explained between 6% (temperature) and 2.5% (position). K-max steadily decreased with body size and increased with temperature. All else being equal, herbivores/macroalgivores and pelagic reef fishes had higher growth rates than the other groups. Moreover, length-frequency ageing tended to overestimate K-max compared to other methods (e.g. otolith's rings). Our results are consistent with (a) metabolic theory that predicts body size and temperature dependence of physiological rates; and (b) ecological theory that implies influence of resource availability and acquisition on growth. At last, we use machine learning to accurately predict growth coefficients for combinations of traits and environmental settings. Our study helps to bridge the gap between individual and community growth patterns, providing insights into the role of fish growth in the ecosystem process of biomass accumulation.

Teleost fishes are the most diverse group of vertebrates on Earth. On tropical coral reefs, their species richness exceeds 6000 species; one tenth of total vertebrate biodiversity. A large proportion of this diversity is composed of cryptobenthic reef fishes (CRFs): bottom-dwelling, morphologically or behaviourally cryptic species typically less than 50 mm in length. Yet, despite their diversity and abundance, these fishes are both poorly defined and understood. Herein we provide a new quantitative definition and synthesise current knowledge on the diversity, distribution and life history of CRFs. First, we use size distributions within families to define 17 core CRF families as characterised by the high prevalence (>10%) of small-bodied species (

Tubelip wrasses were probably the first modern fish group to feed on corals, an ability that has been linked to their unusual lips. However, the only detailed account of these lips is based on a qualitative description of one tubelip wrasse species. Here, we provide the first quantitative evaluation of the lips of a broad range of wrasses and offer insights into the functional role of lips in coral-feeding fishes. A phylogenetic principal components analysis of 27 morphological traits revealed a clear differentiation between the lips of three coral-feeding tubelip wrasse genera (Labrichthys, Labropsis, and Diproctacanthus) and 12 non-corallivorous genera. This separation among taxa was based primarily on the presence of a glandular lip epithelium in tubelip wrasses. Our findings support the hypothesis that mucus secretion in the lips of tubelip wrasses plays a key role in their coral-feeding ecology, and highlight the value of soft anatomy in enabling fishes to exploit novel trophic resources.

The New World Halichoeres comprises about 30 small to medium sized wrasse species that are prominent members of reef communities throughout the tropical Western Atlantic and Eastern Pacific. We conducted a phylogenetic analysis of this group and related lineages using new and previously published sequence data. We estimated divergence times, evaluated the monophyly of this group, their relationship to other labrids, as well as the time-course and geography of speciation. These analyses show that all members of New World Halichoeres form a monophyletic group that includes Oxyjulis and Sagittalarva. New World Halichoeres is one of numerous labrid groups that appear to have radiated rapidly about 32 Ma and form a large polytomy within the julidine wrasses. We reconstruct the tropical Western Atlantic to be the ancestral area of New World Halichoeres, with four invasions of the Eastern Pacific and one reversal from East Pacific to Western Atlantic. These five speciation events were spread across the history of the group, with none corresponding closely to the time of the closure of the Isthmus of Panama. Three speciation events within the Atlantic occurred across the Orinoco-Amazon outflow and within the Pacific, five involve splits between lineages that occupy coastal reef systems and offshore islands. Of eight sister species pairs, seven show complete allopatry and one is fully sympatric.

X-ray micro-computed tomography scans were used to examine the caudal-fin structure of an unusual double-tailed deformity in an adult brown surgeonfish Acanthurus nigrofuscus from the Great Barrier Reef. In both this case and in a similar double-tailed deformity in a juvenile Tomini surgeonfish Ctenochaetus tominiensis from the Philippines, the caudal fin was duplicated along the dorsoventral axis. Detailed examination of the A. nigrofuscus specimen revealed that the deformity was associated with duplication and reflection of the hypural plates and the posterior vertebrae, yet the fish survived to adulthood, indicating that the effects of duplication on survival may be limited.

[Extract] Accurate interpretation of fossils of one organism inside another is essential for understanding predator-prey relationships, food-web structure, and energy flows in ancient ecosystems. Fossils of a fish inside the mouth or stomach of another fish are thought to represent examples of normal predation in such ecosystems (Viohl 1990; Maisey 1994; McAllister 2003; Ebert et al. 2015). Further, so-called “aspiration” fossils of a relatively large fish partly inserted headfirst into the mouth of another fish (Fig. 1A) often are considered to be the result of ingestion of over-sized normal prey leading to the death of the predator (Grande 1984, 2013; Viohl 1990; McAllister 2003; Ebert et al. 2015), which is known to happen with modern predatory fishes (e.g., Viohl 1990). However, there are other plausible explanations for some such fish fossils.

The world's coral reef ecosystems are steadily being reconfigured by climate change. Lizard Island, on Australia's Great Barrier Reef, offers an opportunity to examine coral reef reassembly following disturbance, as this location has been impacted by consecutive tropical cyclones and consecutive coral bleaching events. Based on repeatedly monitoring the same 349 photoquadrats around Lizard Island over a 5-year period (2016–2021) we revealed that bleaching in 2016 drove a ∼50% reduction in hard coral cover, and a concomitant increase in algal turf cover. From 2018 to 2021, significant increases (>600%) in coral cover were detected on two semi-exposed reefs and were associated with substantial Acropora recruitment. By contrast, fourteen lagoonal and back reefs exhibited virtually no recovery nor Acropora recruitment. Given that the timeframe between disturbances is set to decrease, our results suggest that some recovery is possible immediately after severe cumulative disturbances, although this recovery may be highly spatially heterogenous.

Cumulative anthropogenic stressors on tropical reefs are modifying the physical and community structure of coral assemblages, altering the rich biological communities that depend on this critical habitat. As a consequence, new reef configurations are often characterized by low coral cover and a shift in coral species towards massive and encrusting corals. Given that coral numbers are dwindling in these new reef systems, it is important to evaluate the potential influence of coral predation on these remaining corals. We examined the effect of a key group of coral predators (parrotfishes) on one of the emerging dominant coral taxa on Anthropocene reefs, massive Porites. Specifically, we evaluate whether the intensity of parrotfish predation on this key reef-building coral has changed in response to severe coral reef degradation. We found evidence that coral predation rates may have decreased, despite only minor changes in parrotfish abundance. However, higher scar densities on small Porites colonies, compared to large colonies, suggests that the observed decrease in scarring rates may be a reflection of colony-size specific rates of feeding scars. Reduced parrotfish corallivory may reflect the loss of small Porites colonies, or changing foraging opportunities for parrotfishes. The reduction in scar density on massive Porites suggests that the remaining stress-tolerant corals may have passed the vulnerable small colony stage. These results highlight the potential for shifts in ecological functions on ecosystems facing high levels of environmental stress.

After being displaced, juvenile reef fishes are able to return home over large distances. This strong homing behaviour is extraordinary and may allow insights into the longer-term spatial ecology of fish communities. For example, it appears intuitive that strong homing behaviour should be indicative of long-term site fidelity. However, this connection has rarely been tested. We quantified the site fidelity of juvenile fishes of four species after returning home following displacement. Two species, parrotfishes and Pomacentrus moluccensis, showed significantly reduced site fidelity after returning home. On average, they disappeared from their home sites almost 3 d earlier than expected. Mortality or competitive exclusion does not seem to be the main reasons for their disappearance. Rather, we suggest an increased propensity to relocate after encountering alternative reef locations while homing. It appears that some juvenile fishes may have a higher innate spatial flexibility than their strict homing drive suggests.

Large fishes often shelter beneath structures on coral reefs. While avoidance of UV radiation has been proposed as the main driver of this behaviour, sheltering behaviour has only been studied during the day and over short timeframes. Here we applied passive acoustic telemetry techniques to continuously monitor shelter usage patterns by large reef fishes over a period of 7 months. For three sweetlip species (Haemulidae), one snapper species (Lutjanidae) and one surgeonfish species (Acanthuridae), diurnal shelter use was remarkably consistent, with occupation of shelters throughout the day, and under all weather conditions, suggesting that factors other than UV avoidance may be important in driving shelter use. Large-scale observations revealed that all fish species appeared to undertake long-distance migrations (>1 km) away from their shelter sites each night. With the exception of the surgeonfish Acanthurus dussumieri, all fishes returned to the same areas to shelter for the entire study period. Individuals of A. dussumieri, however, failed to return on the night of a severe tropical cyclone. They never reappeared at the shelter sites. The disappearance of this species suggests that A. dussumieri probably forage at night in a different location to the carnivorous haemulids and lutjanids. Overall, this study highlights the long-term importance of shelter structures for fishes that may range over large areas of coral reefs.

Adult coral-reef fishes display a remarkable ability to return home after being displaced. However, we know very little about homing behaviour in juvenile fishes. Homing behaviour in juvenile fishes is of interest because it will shape subsequent spatial distributions of adult fish communities. Comparing multiple species, families and functional groups allows us to distinguish between species-specific traits and more generalised, species-independent traits that may drive homing behaviour. Using displacement experiments of up to 150 m, we quantified homing behaviour of juvenile, newly recruited reef fishes of seven species in three families, including herbivorous parrotfishes and rabbitfishes, carnivorous wrasse and planktivorous damselfishes. All species showed the ability to home successfully, but success rates differed among species. Juvenile parrotfishes were the most successful (67% returning home), while return rates in the other species ranged from 10.5% (Siganus doliatus) to 28.9% (Coris batuensis). However, across all species body size appeared to be the main driver of homing success, rather than species-specific traits. With every cm increase in body size, odds of returning home almost tripled (170% increase) across all species. Interestingly, the probability of getting lost was not related to body size, which suggests that mortality was not a major driver of unsuccessful homing. Homing probability halved beyond displacement distances of 10 m and then remained stable. Higher likelihood of homing over short distances may suggest that different sensory cues are used to navigate. Overall, our results suggest that homing ability is a widespread trait among juvenile reef fishes. A ‘sense of home’ and site attachment appear to develop early during ontogeny, especially above taxon-specific size thresholds. Hence, spatial flexibility exists only in a brief window after settlement, with direct implications for subsequent patterns of connectivity and ecosystem function in adult reef fish populations.

Tropical and temperate marine habitats have long been recognised as fundamentally different system, yet comparative studies are rare, particularly for small organisms such as Crustacea. This study investigates the ecological attributes (abundance, biomass and estimated productivity) of benthic Crustacea in selected microhabitats from a tropical and a temperate location, revealing marked differences in the crustacean assemblages. In general, microhabitats from the tropical location (dead coral, the epilithic algal matrix [algal turfs] and sand) supported high abundances of small individuals (mean length = 0.53 mm vs. 0.96 mm in temperate microhabitats), while temperate microhabitats (the brown seaweed Carpophyllum sp., coralline turf and sand) had substantially greater biomasses of crustaceans and higher estimated productivity rates. In both locations, the most important microhabitats for crustaceans (per unit area) were complex structures: tropical dead coral and temperate Carpophyllum sp. It appears that the differences between microhabitats are largely driven by the size and relative abundance of key crustacean groups. Temperate microhabitats have a higher proportion of relatively large Peracarida (Amphipoda and Isopoda), whereas tropical microhabitats are dominated by small detrital- and microalgal-feeding crustaceans (harpacticoid copepods and ostracods). These differences highlight the vulnerability of tropical and temperate systems to the loss of complex benthic structures and their associated crustacean assemblages.

The lined bristletooth, Ctenochaetus striatus, and the brown surgeonfish, Acanthurus nigrofuscus, are among the most abundant surgeonfishes on Indo-Pacific coral reefs. Yet, the functional role of these species has been the focus of an ongoing debate lasting at least six decades. Specifically, to what extent are C. striatus herbivorous like the visually similar A. nigrofuscus? To address this question, we used natural feeding surfaces, covered with late successional stage reef-grown algal turfs, to examine turf algal removal by the two species. Surfaces exposed to C. striatus in laboratory experiments exhibited no significant reductions in turf length or area covered by turfing algae. In marked contrast, A. nigrofuscus reduced turf length by 51% and area covered by turfing algae by 15% in 1 h. The gut contents of specimens from the reef revealed that A. nigrofuscus predominantly ingests algae (the dominant item in 79.6–94.7% of gut content quadrats), while C. striatus ingests detritus and sediments (dominant in 99.6–100% of quadrats). Therefore, C. striatus ingests detritus and sediment, leaving mature algal turfs relatively intact, while A. nigrofuscus directly removes and ingests turf algae. The function of C. striatus differs from cropping herbivorous surgeonfishes such as A. nigrofuscus. On coral reefs, C. striatus brush detrital aggregates from algal turfs, removing microorganisms, organic detritus and inorganic sediment. Confusion over the functional role of C. striatus may stem from an inability to fit it into a single functional category.

We examine the effects of different biogeographic histories on assemblage composition in three major marine habitats in two biogeographically distinct marine realms. Specifically, we quantify the taxonomic and functional composition of fish assemblages that characterise coral reef, seagrass and mangrove habitats, to explore the potential effects of biogeographic history and environment on assemblage composition. The three habitats were surveyed in the Caribbean and on the Great Barrier Reef using a standardised underwater visual census method to record fish size and abundance data. The taxonomic composition of assemblages followed biogeographic expectations, with realm-specific family-level compositions. In marked contrast, the functional composition of assemblages separated habitats regardless of their biogeographic locations. In essence, taxonomy characterises biogeographic realms while functional groups characterise habitats. The Caribbean and Indo-West Pacific have been separated for approximately 15 million years. The two realms have different taxonomic structures which reflect this extended separation, however, the three dominant shallow-water marine habitats all retain distinct functional characteristics: seagrass fishes are functionally similar regardless of their taxonomic composition or biogeographic location. Likewise, for coral reefs and mangroves. The results emphasise the advantages and limitations of taxonomic vs. functional metrics in evaluating patterns. Taxonomy primarily reflects biogeographic and evolutionary history while functional characteristics may better reflect ecological constraints.

Abundance patterns in ecological communities have important implications for biodiversity maintenance and ecosystem functioning. However, ecological theory has been largely unsuccessful at capturing multiple macroecological abundance patterns simultaneously. Here, we propose a parsimonious model that unifies widespread ecological relationships involving local aggregation, species-abundance distributions, and species associations, and we test this model against the metacommunity structure of reef-building corals and coral reef fishes across the western and central Pacific. For both corals and fishes, the unified model simultaneously captures extremely well local species-abundance distributions, interspecific variation in the strength of spatial aggregation, patterns of community similarity, species accumulation, and regional species richness, performing far better than alternative models also examined here and in previous work on coral reefs. Our approach contributes to the development of synthetic theory for large-scale patterns of community structure in nature, and to addressing ongoing challenges in biodiversity conservation at macroecological scales.

The presence of key organisms is frequently associated with the delivery of specific ecosystem functions. Areas with such organisms are therefore often considered to have greater levels of these functions. While this assumption has been the backbone of coral reef ecosystem-based management approaches for decades, we currently have only a limited understanding of how fish presence equates to function on coral reefs and whether this relationship is susceptible to stressors. To assess the capacity of a stressor to shape function delivery we used a multi-scale approach ranging from tens of kilometres across the continental shelf of Australia's Great Barrier Reef, down to centimetres within a reef habitat. At each scale, we quantified the spatial extent of a model function (detritivory) by a coral reef surgeonfish (Ctenochaetus striatus) and its potential to be shaped by sediments. At broad spatial scales, C. striatus presence was correlated strongly with algal turf sediment loads, while at smaller spatial scales, function delivery appears to be constrained by algal turf sediment distributions. In all cases, sediment loads above ~250–500 g m−2 were associated with a marked decrease in fish abundance or feeding activity, suggesting that a common ecological threshold lies within this range. Our results reveal a complex functional dynamic between proximate agents of function delivery (fish) and the ultimate drivers of function delivery (sediments), which emphasizes: a) weaknesses in the assumed links between fish presence and function, and b) the multi-scale capacity of algal turf sediments to shape reef processes. Unless direct extractive activities (e.g. fishing) are the main driver of function loss on coral reefs, managing to conserve fish abundance is unlikely to yield the desired outcomes. It only addresses one potential driver. Instead, management of both the agents that deliver functions (e.g. fishes), and the drivers that modify functions (e.g. sediments), is needed.

Unprecedented global bleaching events have led to extensive loss of corals. This is expected to lead to extensive losses of obligate coral-dependent fishes. Here, we use a novel, spatially-matched census approach to examine the nature of fish-coral dependency across two mass coral bleaching events. Despite a >40% loss of coral cover, and the ecological extinction of functionally important habitat-providing Acropora corals, we show that populations of obligate coral-dependent fishes, including Pomacentrus moluccensis, persisted and – critically – recruitment was maintained. Fishes used a wide range of alternate reef habitats, including other coral genera and dead coral substrata. Labile habitat associations of ‘obligate’ coral-dependent fishes suggest that recruitment may be sustained on future reefs that lack Acropora, following devastating climatic disturbances. This persistence without Acropora corals offers grounds for cautious optimism; for coral-dwelling fishes, corals may be a preferred habitat, not an obligate requirement., Sharon Wismer et al. report the effects of coral loss on the Great Barrier Reef on coral-dependent fish populations. They show that despite huge losses in coral cover, both adult and young fishes persisted by using a range of alternative reef habitats.

Numerous organisms display conspicuous eyespots. These eye‐like patterns have been shown to effectively reduce predation by either deflecting strikes away from nonvital organs or by intimidating potential predators. While investigated extensively in terrestrial systems, determining what factors shape eyespot form in colorful coral reef fishes remains less well known. Using a broadscale approach we ask: How does the size of the eyespot relate to the actual eye, and at what size during ontogeny are eyespots acquired or lost? We utilized publicly available images to generate a dataset of 167 eyespot‐bearing reef fish species. We measured multiple features relating to the size of the fish, its eye, and the size of its eyespot. In reef fishes, the area of the eyespot closely matches that of the real eye; however, the eyespots “pupil” is nearly four times larger than the real pupil. Eyespots appear at about 20 mm standard length. However, there is a marked decrease in the presence of eyespots in fishes above 48 mm standard length; a size which is tightly correlated with significant decreases in documented mortality rates. Above 75–85 mm, the cost of eyespots appears to outweigh their benefit. Our results identify a “size window” for eyespots in coral reef fishes, which suggests that eyespot use is strictly body size‐dependent within this group., Eyespots can help deter predation. We found that the eyespot's “pupil” is much larger than the real pupil. Furthermore, eyespots are less common in fishes as they become adults.

Phenotypic adaptations can allow organisms to relax abiotic selection and facilitate their ecological success in challenging habitats, yet we have relatively little data for the prevalence of this phenomenon at macroecological scales. Using data on the relative abundance of coral reef wrasses and parrotfishes (f. Labridae) spread across three ocean basins and the Red Sea, we reveal the consistent global dominance of extreme wave-swept habitats by fishes in the genus Thalassoma, with abundances up to 15 times higher than any other labrid. A key locomotor modification-a winged pectoral fin that facilitates efficient underwater flight in high-flow environments-is likely to have underpinned this global success, as numerical dominance by Thalassoma was contingent upon the presence of high-intensity wave energy. The ecological success of the most abundant species also varied with species richness and the presence of congeneric competitors. While several fish taxa have independently evolved winged pectoral fins, Thalassoma appears to have combined efficient high-speed swimming (to relax abiotic selection) with trophic versatility (to maximize exploitation of rich resources) to exploit and dominate extreme coral reef habitats around the world.

Small fishes suffer high mortality rates on coral reefs, primarily due to predation. Although studies have identified the predators of early post-settlement fishes, the predators of small cryptobenthic fishes remain largely unknown. We therefore used a series of mesocosm experiments with natural habitat and cryptobenthic fish communities to identify the impacts of a range of small potential predators, including several invertebrates, on prey fish populations. While there was high variability in predation rates, many members of the cryptobenthic fish community act as facultative cryptopredators, being prey when small and piscivores when larger. Surprisingly, we also found that smashing mantis shrimps may be important fish predators. Our results highlight the diversity of the predatory community on coral reefs and identify previously unknown trophic links in these complex ecosystems.

The behaviour of juvenile fishes is critical in establishing the link between recruitment and subsequent adult populations. If juvenile fishes move, they can respond to variation in local conditions before adult home ranges are established. Alternatively, if juveniles establish fixed home ranges at settlement, their decisions may determine future population densities at small spatial scales. Field observations and translocations revealed that juvenile rabbitfishes (Siganus corallinus and S. doliatus) have small home ranges and strong homing abilities (covering 6 m in 1 h or 36 m within 24 h). Only four of 22 individuals failed to return; all were transferred up-current, suggesting that olfaction is important in homing. Small home ranges and strong homing tendencies in juvenile herbivores suggest that decisions made by recruits will impact the spatial extent of both adult fishes and the functional roles they play within ecosystems.

Consumer-producer dynamics are critical for ecosystem functioning. In marine environments, primary production is often subject to strong consumer control, and on coral reefs, the grazing pressure exerted by herbivorous fishes has been identified as a major determinant of benthic community structure. Using experimental surfaces, we demonstrate that on coral reefs, microtopographic refuges decrease the overall grazing pressure by more than one order of magnitude. Furthermore, by functionally characterizing consumer communities, we show that refuges also restrict grazer communities to only one functional group, algal croppers, which selectively remove the apical parts of algae. In contrast, detritivorous fishes, which intensively graze flat and exposed microhabitats and can remove both particulate matter and entire stands of algal filaments, are almost entirely excluded. This preclusion of an entire ecosystem process (the removal of particulates) results in two distinct coexisting benthic regimes: communities within refuges are diverse and characterized by numerous algal types and juvenile scleractinian corals, while communities outside refuges support only low-diversity assemblages dominated by simple, unbranched filamentous turf algal mats. Although limited to the scale of a few centimeters, microtopographic refuges can, therefore, mediate the biotic control of community development by affecting both overall grazing rates and the functional diversity of consumer communities. We suggest that the coexistence of two distinct benthic regimes at a small spatial scale may be an important factor for ecosystem functioning and highlight the need to consider the ecological complexity of consumer-producer dynamics when assessing the status of coral reef ecosystems.

Crustaceans are an important component of coral reef ecosystems, occupying a broad range of microhabitats, but achieving the greatest biomass in dead coral and coral rubble. These 2 microhabitats are therefore hypothesised to be focal foraging locations for crustacean-feeding fishes. The present study investigated the relationship between foraging in wrasses (Labridae), a major group of crustacean predators, and 5 major microhabitats on a coral reef: live coral, dead coral, coral rubble, sand and the epilithic algal matrix (EAM). Although the greatest biomass of crustaceans typically occurs in dead coral and coral rubble, crustacean-feeding wrasses displayed positive selection for a more diverse range of microhabitats. In contrast, sand and live coral were not positively selected by any taxa. The relationships between crustacean predators and their prey appear to be more complicated than previously assumed, and may be mediated by habitat structure, preferred prey, predation risk and behavioural and morphological adaptations.

Coral reefs are renowned for their spectacular biodiversity and the close links between fishes and corals. Despite extensive fossil records and common biogeographic histories, the evolution of these two key groups has rarely been considered together. We therefore examine recent advances in molecular phylogenetics and palaeoecology, and place the evolution of fishes and corals in a functional context. In critically reviewing the available fossil and phylogenetic evidence, we reveal a marked congruence in the evolution of the two groups. Despite one group consisting of swimming vertebrates and the other colonial symbiotic invertebrates, fishes and corals have remarkably similar evolutionary histories. In the Paleocene and Eocene [66-34 million years ago (Ma)] most modern fish and coral families were present, and both were represented by a wide range of functional morphotypes. However, there is little evidence of diversification at this time. By contrast, in the Oligocene and Miocene (34-5.3 Ma), both groups exhibited rapid lineage diversification. There is also evidence of increasing reef area, occupation of new habitats, increasing coral cover, and potentially, increasing fish abundance. Functionally, the Oligocene-Miocene is marked by the appearance of new fish and coral taxa associated with high-turnover fast-growth ecosystems and the colonization of reef flats. It is in this period that the functional characteristics of modern coral reefs were established. Most species, however, only arose in the last 5.3 million years (Myr; Plio-Pleistocene), with the average age of fish species being 5.3 Myr, and corals just 1.9 Myr. While these species are genetically distinct, phenotypic differences are often limited to variation in colour or minor morphological features. This suggests that the rapid increase in biodiversity during the last 5.3 Myr was not matched by changes in ecosystem function. For reef fishes, colour appears to be central to recent diversification. However, the presence of pigment patterns in the Eocene suggests that colour may not have driven recent diversification. Furthermore, the lack of functional changes in fishes or corals over the last 5 Myr raises questions over the role and importance of biodiversity in shaping the future of coral reefs.

Farming damselfishes are well known for shaping benthic communities on reefs, in terms of both cultivating algae and increasing productivity. However, their capacity to shape relationships between algal turfs, detritus and sediments remains largely unknown, despite the importance of such relationships on reefs. We therefore examined the relationships between sediment loads and both algal turf length and detritus levels, inside and outside farming damselfish territories, at two reefs on the Great Barrier Reef. We found that, while sediment loads are tightly coupled with algal turfs outside territories, the nature of this coupling was fundamentally different inside damselfish territories, with significantly longer algal turfs and higher detritus levels prevailing, irrespective of sediment loads. These modified algal turf-sediment relationships may be a key factor in explaining, a) the significantly higher productivity levels reported from within farming damselfish territories and b) the ability of farming damselfishes to persist in high-sediment locations.

Organisms often utilise different habitats for different reasons, whether it be for acquiring resources, avoiding predation or for reproduction. In coastal tropical ecosystems, coral reefs, seagrass beds and mangrove forests frequently occur in a complex mosaic of intermixed habitats. One of the most commonly identified links between these habitats is the nursery function; that some fish species utilise mangroves and seagrass as juveniles before moving onto reefs as adults. We investigated whether this potential link between habitats is reflected in the similarity of their fish assemblages and if this similarity differs between major biogeographic realms. Visual surveys in the three focal habitats in the Caribbean and on the Great Barrier Reef (GBR) provided assemblage composition data. We found a near ten-fold increase in the percentage of species that occupy all three habitats in the Caribbean when compared to the GBR. When only assessing species that occurred in multiple habitats, the Caribbean displayed strong shifts linked to ontogeny and greater abundances of multihabitat species, supporting the proposed nursery function. GBR assemblages remained more distinct regardless of ontogeny, offering little support for the nursery function. Most multihabitat species in the Caribbean reach larger adult body sizes (≥30 cm, e.g. Haemulon flavolineatum) vs. smaller bodied (

Distinct zonation of community assemblages among habitats is a ubiquitous feature of coral reefs. The distribution of roving herbivorous fishes (parrotfishes, surgeonfishes and rabbitfishes) is a particularly clear example, with the abundance of these fishes generally peaking in shallow-water, high-energy habitats, regardless of the biogeographic realm. Yet, our understanding of the factors which structure this habitat partitioning, especially with regards to different facets of structural complexity and nutritional resource availability, is limited. To address this issue, we used three-dimensional photogrammetry and structure-from-motion technologies to describe five components of structural complexity (rugosity, coral cover, verticality, refuge density and field-of-view) and nutritional resource availability (grazing surface area) among habitats and considered how these factors are related to herbivorous fish distributions. All complexity metrics (including coral cover) were highest on the slope and crest. Nutritional resource availability differed from this general pattern and peaked on the outer-flat. Unexpectedly, when compared to the distribution of herbivorous fishes, none of the complexity metrics had a marked influence in the models. However, grazing surface area was a strong predictor of both the abundance and biomass of herbivorous fishes. The strong relationship between grazing surface area and herbivorous fish distributions indicates that nutritional resource availability may be one of the primary factors driving the distribution of roving herbivorous fishes. The lack of a relationship between complexity and herbivorous fishes, and a strong affinity of herbivorous fishes for low-complexity, algal turf-dominated outer-flat habitats, offers some cautious optimism that herbivory may be sustained on future, low-complexity, algal turf-dominated reef configurations.

Herbivory by fishes has been identified as a key ecological process shaping coral reefs through time. Although taxonomically limited, herbivorous reef fishes display a wide range of traits, which results in varied ecosystem functions on reefs around the world. Yet, we understand little about how these trait combinations and functions in ecosystems changed through time and across biogeographic realms. Here, we used fossils and phylogenies in a functional ecological framework to reveal temporal changes in nominally herbivorous fish assemblages among oceanic basins in both trait space and lineage richness among functions. We show that the trait space occupied by extant herbivorous fishes in the Indo-Pacific resulted from an expansion of traits from the ancestral Tethyan assemblages. By contrast, trait space in the Atlantic is the result of lineage turnover, with relatively recent colonization by lineages that arose in the east Tethys/Indo-Pacific. From an ecosystem function perspective, the Atlantic supports a depauperate fauna, with few extant herbivorous reef fish lineages performing each function. Indo-Pacific fishes support both more functions and more lineages within each function, with a marked Miocene to Pleistocene expansion. These disparities highlight the importance of history in explaining global variation in fish functional composition on coral reefs.

Teeth are crucial in elucidating the life history of vertebrates. However, most studies of teeth have focused on mammals. In heterodont mammals, tooth function is based on tooth shape and position along the jaw. However, the vast majority of vertebrates are homodont, and tooth function might not be based on the same principles (in homodonts, tooth shape is broadly similar along the jaw). We provide a quantitative framework and establish dentition-based morphotypes for piscivorous fishes. We then assess how these morphotypes relate to key functional feeding traits. We identified three broad morphotypes: edentulate, villiform and macrodont, with edentulate and villiform species displaying considerable functional overlap; macrodont species are more distinct. When analysing macrodonts exclusively, we found a major axis of variation between ‘front-fanged’ and ‘back-fanged’ species. The functional interpretations of this axis suggest that tooth-based functional decoupling could exist, even in homodont vertebrates, where teeth have similar shapes. This diversity is based not only on tooth shape but also solely on the position along the jaw.