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Ulvan is a sulfated heteropolysaccharide present in the cell wall of Ulva species with unique structural properties and technological potential. Here we characterized by FTIR and NMR analysis the structure of ulvan from Ulva fasciata collected in natural environment (SEA) and after in vitro biomass cultivation in nutrient enriched water (CULT). FTIR spectrum of CULT ulvan presented stronger signals of sulfate groups than SEA. 1H and 13C NMR showed that both ulvan are composed mainly of ulvanobiuronic acid 3-sulfate type A and type B. SEA ulvan presented signals characteristics of xylose, suggesting the presence of ulvanobiose in its structure, while CULT presented most signals of type A disaccharide. The cultivation of Ulva could be an alternative to suffice the emerging demand for ulvan meeting requirements of quality and quantity.

Species of the genusUlvaare common in anthropogenically disturbed areas and have been reported as the cause of green tides in many areas of the world. In addition, they rank among the main marine groups used in a wide range of commercial applications. By displaying few distinctive morphological characters, some taxonomical identifications are difficult and the genus is under a conundrum. Our aims were to provide ecophysiological information about threeUlvaspecies in response to abiotic factors and to evaluate the proposal of ecophysiological information and the chlorophyll-afluorescence technique as auxiliary tool to resolve the long-standing taxonomic confusion. We hypothesize that three cooccurring specimens (U. fasciataDelile,U. lactucaLinnaeus, andU. rigidaC. Agardh) have different ecophysiological responses (as measured by the effective quantum yield of photosystem II by pulse amplitude modulated fluorometers) under manipulated conditions of temperature and nutrient concentration.Ulva lactucaandU. rigidashowed different photosynthetic efficiencies related to temperature, whereas no difference was recorded forU. fasciataindividuals. These results provide a reasonable explanation for the variability in spatial and temporal abundance of these species ofUlvaon rocky shores. We proposed the use of ecophysiological information by chlorophyll-afluorescence as an auxiliary tool to corroborate the taxonomic distinction ofUlvaspecies. We reinforce the statement ofU. fasciataandU. lactucaas distinct valid species.

The polar regions have relatively low richness and diversity of plants and animals, and the basis of the entire ecological chain is supported by microbial diversity. In these regions, understanding the microbial response against environmental factors and anthropogenic disturbances is essential to understand patterns better, prevent isolated events, and apply biotechnology strategies. The Antarctic continent has been increasingly affected by anthropogenic contamination, and its constant temperature fluctuations limit the application of clean recovery strategies, such as bioremediation. We evaluated the bacterial response in oil-contaminated soil through a nutrient-amended microcosm experiment using two temperature regimes: (i) 4 degrees C and (ii) a freeze-thaw cycle (FTC) alternating between -20 and 4 degrees C. Bacterial taxa, such as Myxococcales, Chitinophagaceae, and Acidimicrobiales, were strongly related to the FTC. Rhodococcus was positively related to contaminated soils and further stimulated under FTC conditions. Additionally, the nutrient-amended treatment under the FTC regime enhanced bacterial groups with known biodegradation potential and was efficient in removing hydrocarbons of diesel oil. The experimental design, rates of bacterial succession, and level of hydrocarbon transformation can be considered as a baseline for further studies aimed at improving bioremediation strategies in environments affected by FTC regimes. Funding Agencies|Conselho Nacional de Desenvolvimento Cientifico e Tecnologico (CNPq)National Council for Scientific and Technological Development (CNPq); Fundacao de Amparo a Pesquisa do Estado do Rio de Janeiro (FAPERJ)Carlos Chagas Filho Foundation for Research Support of the State of Rio de Janeiro (FAPERJ); Coordenacao de Aperfeicoamento de Pessoal de Nivel Superior (CAPES)CAPES; KAUSTKing Abdullah University of Science & Technology [BAS/1/1096-01-01]

Phosphorus is a key macronutrient in macroalgal physiology, including carbohydrate anabolism. To determine the effects of phosphorus on different physiological parameters, we cultivated Ulva fasciata specimens from distinct localities (upwelling and non-upwelling sites) in the presence of different phosphate concentrations (0, 2, and 4 µM PO 4 3 − ${\text{PO}}_{4}^{3-}$ ). After 15 days, growth rates were similar (approx. 12% day−1) and carbohydrate contents had increased in individuals from both sites. In individuals from the upwelling site, carbohydrate contents were high in all treatments (71% dry mass), whereas non-upwelling site individuals cultivated under the highest phosphate concentration showed the lowest carbohydrate content (46% DM). Nevertheless, we observed higher rates of phosphorus uptake in individuals from the non-upwelling site cultivated under the highest phosphate concentration, indicating a stress response to elevated nutrient concentrations. Individuals from both sites cultivated with phosphate maintained healthy photosystems over the experimental period (F v/F m = 0.788), whereas those cultivated in the absence of phosphate showed evidence of photosystem impairment, as indicated by a progressive decline in maximum quantum yield. Altogether, our results indicate that site origin and phosphate concentration influence the carbohydrate content in U. fasciata and that individuals from sites with broad environmental variation, such as upwelling events, can show higher productivity.

Aedes aegypti is adapted to live in close association with human dwellings, where it lays eggs in several man-made container types with a broad range of size, shape, and material. Biotic and abiotic conditions of larval habitats determine the abundance and body size of emerging adult mosquitoes. Here, we estimated the predictive potential of physicochemical water variables for Culicidae immature abundance and Ae. aegypti adult body size in four neighborhoods with distinct urban landscapes in Rio de Janeiro, Brazil. Domestic water holding containers (N = 240) were inspected for the presence of Culicidae immatures and had several physiochemical parameters measured. Larvae and pupae were counted, and pupae were reared to the adult stage for taxonomic identification. Dry weight and wing size were measured for Ae. aegypti adult mosquitoes (N = 981). The association between larval habitat parameters with Culicidae abundance and Ae. aegypti body size data was estimated through linear mixed models and generalized linear mixed models, respectively, with the neighborhood as random effect. The abundance of immature Culicidae in larval habitats (from which >90% of adults emerging from field collected pupae were Ae. aegypti) was positively associated with container volume and the dissolved organic carbon concentration (DOC). Female average dry weight and male and female wing lengths were positively associated with larval habitat temperature whereas male average dry weight was positively related to water conductivity. Aedes aegypti originating from larval habitats with Ae. albopictus exhibited no differences in median wing length and dry body weight when compared with specimens collected in containers exclusively colonized by Ae. aegypti. These results demonstrate that container water volume (characteristic easily observed in the field) and DOC (often higher in unmanaged water holding recipients) is related to higher Ae. aegypti immature density. Estimating the effects of physicochemical water variables on immature abundance and adult body size can provide valuable information for predicting arbovirus transmission risk in endemic settings. Funding Agencies|US National Institutes of Health Fogarty International Center FIRCA [R03TW00744601A1]; Conselho Nacional de Desenvolvimento Cientifico e TecnologicoNational Council for Scientific and Technological Development (CNPq) [12446/2018]; Preventing and Combating the Zika Virus MCTIC/FNDCT-CNPq/MEC-CAPES/MS-Decit. [440929/2016-4]; Fundacao Carlos Chagas Filho de Amparo a Pesquisa do Estado do Rio de Janeiro [E-26/203.064/2016, E-26/201.335/2016]; Coordenacao de Aperfeicoamento de Pessoal de Nivel Superior-CAPESCAPES [001]; Coordination for the Improvement of Higher Education Personnel-CAPESCAPES; Fiocruz (Programa Institucional de Internacionalizacao da Fiocruz PrInt FiocruzCAPES)

Lake sediments in Amazonia are a significant source of CH4, a potential greenhouse gas. Previous studies of sediments using 13C analysis found that the contribution of hydrogenotrophic versus acetoclastic methanogenesis to CH4 production was relatively high. Here, we determined the methanogenic pathway in the same sediments (n=6) by applying 14Cbicarbonate or 2-14Cacetate and confirmed the high relative contribution (50 %–80 %) of hydrogenotrophic methanogenesis. The respiratory index (RI) of 2-14Cacetate, which is 14CO2 relative to 14CH4+14CO2, divided the sediments into two categories, i.e., those with an RI  0.4 showing that a large percentage of the acetate-methyl was oxidized to CO2 rather than reduced to CH4. Hence, part of the acetate was probably converted to CO2 plus H2 via syntrophic oxidation, thus enhancing hydrogenotrophic methanogenesis. This happened despite the presence of potentially acetoclastic Methanosaetaceae in all the sediments. Alternatively, acetate may have been oxidized with a constituent of the sediment organic matter (humic acid) serving as oxidant. Indeed, apparent acetate turnover rates were larger than CH4 production rates except in those sediments with a R<0.2. Our study demonstrates that CH4 production in Amazonian lake sediments was not simply caused by a combination of hydrogenotrophic and acetoclastic methanogenesis but probably involved additional acetate turnover.

Bento, L.; Masuda, L.S.M.; Peixoto, R.B., and Enrich-Prast, A., 2017. Regulation in the metabolism and community structure of a tropical salt flat after rainfall. Tropical salt flats typically lack a water column for most of the year, which means that rainfall is probably one of the major factors that regulate benthic microalgae and metabolism in areas subjected to periodic drought. Therefore, the goal of this study was to evaluate the effects of rainfall on the ecological function and community structure of a tropical mangrove salt flat area. This study showed that the highest primary production and respiration fluxes were recorded on the last day of sampling when it rained (−7.6 and 4.7 mmol C-CO2 m−2 h−1, respectively). Net primary production increased significantly compared with the dry period that preceded the rain event. The results also suggested that community structure was regulated by rainfall. After the rain event, abundance increased by one order of magnitude, but the diversity and ev...

The floodplain of the Amazon River is a large source for the greenhouse gas methane, but the soil microbial communities and processes involved are little known. We studied the structure and function of the methanogenic microbial communities in soils across different inundation regimes in the Cunia Reserve, encompassing nonflooded forest soil (dry forest), occasionally flooded Igapo soils (dry Igapo), long time flooded Igapo soils (wet Igapo) and sediments from Igarape streams (Igarape). We also investigated a Transect (four sites) from the water shoreline into the dry forest. The potential and resilience of the CH4 production process were studied in the original soil samples upon anaerobic incubation and again after artificial desiccation and rewetting. Bacterial and archaeal 16S rRNA genes and methanogenic mcrA were always present in the soils, except in dry forest soils where mcrA increased only upon anaerobic incubation. NMDS analysis showed a clear effect of desiccation and rewetting treatments on both bacterial and archaeal communities. However, the effects of the different sites were less pronounced, with the exception of Igarape. After anaerobic incubation, methanogenic taxa became more abundant among the Archaea, while there was only little change among the Bacteria. Contribution of hydrogenotrophic methanogenesis was usually around 40%. After desiccation and rewetting, we found that Firmicutes, Methanocellales and Methanosarcinaceae became the dominant taxa, but rates and pathways of CH4 production stayed similar. Such change was also observed in soils from the Transects. The results indicate that microbial community structures of Amazonian soils will in general be strongly affected by flooding and drainage events, while differences between specific field sites will be comparatively minor. Funding Agencies|CNPq; CAPES; FAPERJ; Alexander von Humboldt Foundation; STINT Sweden [2012-2085]; Swedish Research Council [2012-00048]; ERC METLAKE [2017-2021]

Tropical lake sediments are a significant source for the greenhouse gas methane. We studied function (pathway, rate) and structure (abundance, taxonomic composition) of the microbial communities (Bacteria, Archaea) leading to methane formation together with the main physicochemical characteristics in the sediments of four clear water, six white water and three black water lakes of the Amazon River system. Concentrations of sulfate and ferric iron, pH and δ13C of organic carbon were usually higher, while concentrations of carbon, nitrogen and rates of CH4 production were generally lower in white water versus clear water or black water sediments. Copy numbers of bacterial and especially archaeal ribosomal RNA genes also tended to be relatively lower in white water sediments. Hydrogenotrophic methanogenesis contributed 58 ± 16% to total CH4 production in all systems. Network analysis identified six communities, of which four were comprised mostly of bacteria found in all sediment types, while two were mostly in clear water sediment. Terminal restriction fragment length polymorphism (T-RFLP) and pyrosequencing showed that the compositions of the communities differed between the different sediment systems, statistically related to the particular physicochemical conditions and to CH4 production rates. Among the archaea, clear water, white water, and black water sediments contained relatively more Methanomicrobiales, Methanosarcinaceae and Methanocellales, respectively, while Methanosaetaceae were common in all systems. Proteobacteria, Deltaproteobacteria (Myxococcales, Syntrophobacterales, sulfate reducers) in particular, Acidobacteria and Firmicutes were the most abundant bacterial phyla in all sediment systems. Among the other important bacterial phyla, clear water sediments contained relatively more Alphaproteobacteria and Planctomycetes, whereas white water sediments contained relatively more Betaproteobacteria, Firmicutes, Actinobacteria, and Chloroflexi than the respective other sediment system. The data showed communities of bacteria common to all sediment types, but also revealed microbial groups that were significantly different between the sediment types, which also differed in physicochemical conditions. Our study showed that function of the microbial communities may be understood on the basis of their structures, which in turn are determined by environmental heterogeneity. This article is protected by copyright. All rights reserved.

Oilfield wastewater (OFW) is a by-product of petroleum production and has a high nitrogen concentration. Bioremediation by macroalgae appears to be an option for OFW, and the genus Ulva (Chlorophyta) has strong potential as an agent of bioremediation because of its high nitrogen absorption capacity. This experimental study evaluated the efficiency of bioremediation of nitrogenous compounds in three concentrations of OFW by Ulva lactuca. One-phase decay models, photosynthetic status (assessed by pulse amplitude–modulated [PAM] fluorometry), and growth rate were used to assess bioremediation efficiency and algal physiology. All nitrogenous compounds were removed during the experimental period. The models that were applied for ammonium showed a stronger bioremediation effect for OFW at a concentration of 25% than at concentrations of 12.5% and 2.5%, and for nitrate, the models showed a stronger bioremediation effect at the 12.5% OFW concentration. The minor effects of OFW on photosynthetic performanc...

Summary Magnetotactic bacteria (MTB) comprise a group of motile microorganisms common in most mesothermal aquatic habitats with pH values around neutrality. However, during the last two decades, a number of MTB from extreme environments have been characterized including: cultured alkaliphilic strains belonging to the Deltaproteobacteria class of the Proteobacteria phylum; uncultured moderately thermophilic strains belonging to the Nitrospirae phylum; cultured and uncultured moderately halophilic or strongly halotolerant bacteria affiliated with the Deltaproteobacteria and Gammaproteobacteria classes and an uncultured psychrophilic species belonging to the Alphaproteobacteria class. Here, we used culture-independent techniques to characterize MTB from an acidic freshwater lagoon in Brazil (pH ? 4.4). MTB morphotypes found in this acidic lagoon included cocci, rods, spirilla and vibrioid cells. Magnetite (Fe3O4) was the only mineral identified in magnetosomes of these MTB while magnetite magnetosome crystal morphologies within the different MTB cells included cuboctahedral (present in spirilla), elongated prismatic (present in cocci and vibrios) and bullet-shaped (present in rod-shaped cells). Intracellular pH measurements using fluorescent dyes showed that the cytoplasmic pH was close to neutral in most MTB cells and acidic in some intracellular granules. Based on 16S rRNA gene phylogenetic analyses, some of the retrieved gene sequences belonged to the genus Herbaspirillum within the Betaproteobacteria class of the Proteobacteria phylum. Fluorescent in situ hybridization using a Herbaspirillum-specific probe hybridized with vibrioid MTB in magnetically-enriched samples. Transmission electron microscopy of the Herbaspirillum-like MTB revealed the presence of many intracellular granules and a single chain of elongated prismatic magnetite magnetosomes. Diverse populations of MTB have not seemed to have been described in detail in an acid environment. In addition, this is the first report of an MTB phylogenetically affiliated with Betaproteobacteria class. Funding agencies: CNPq; CAPES; FAPERJ; U.S. National Science Foundation (NSF) [EAR-1423939]

Methanogenic microbial communities in soil and sediment function only when the environment is inundated and anoxic. In contrast to submerged soils, desiccation of lake sediments happens only rarely. However, some predictions suggest that extreme events of drying will become more common in the Amazon region, and this will promote an increase in sediments drying and exposure. We asked whether and how such methanogenic communities can withstand desiccation stress. Therefore, we determined the rates and pathways of CH(4) production (analysis of CH(4) and δ(13) C of CH(4), CO(2) and acetate), the copy numbers of bacterial and archaeal 16S rRNA genes and mcrA genes (quantitative PCR), and the community composition of Archaea and Bacteria (T-RFLP and pyrosequencing) in oxbow lake sediments of rivers in the Brazilian Amazon region. The rivers were of white water, black water and clear water type. The measurements were done with sediment in fresh state and after drying and rewetting. After desiccation and rewetting the composition of both, the archaeal and bacterial community changed. Since lake sediments from white water rivers exhibited only negligible methanogenic activity, probably because of relatively high iron and low organic matter content, they were not further analysed. The other sediments produced CH(4), with hydrogenotrophic methanogenesis usually accounting for > 50% of total activity. After desiccation and rewetting, archaeal and bacterial gene copy numbers decreased. The bacterial community showed a remarkable increase of Clostridiales from about 10% to > 30% of all Bacteria, partially caused by proliferation of specific taxa as the numbers of OTU shared with fresh sediment decreased from about 9% to 3%. Among the Archaea, desiccation specifically enhanced the relative abundance of either Methanocellales (black water) and/or Methanosarcinaceae (clear water). Despite the changes in gene copy numbers and composition of the microbial community, rates of CH(4) production even increased after desiccation-rewetting, demonstrating that the function of the methanogenic microbial community had not been impaired. This result indicates that the increase in extreme events of drying may increase methane production in flooded sediments.

Carbon fixation by chemoautotrophic bacteria represents an autochthonous source of organic matter, and may be of particular importance close to redox boundaries. Despite the known sediment chemoautotrophic potential, the quantitative role and the importance of dark carbon fixation (DCF) in lake sediments are still unknown. We provide here a method to measure DCF and bacterial production simultaneously in stratified sediment cores, using C-14 labeled dissolved inorganic carbon ((DIC)-C-14) and H-3-leucine incorporation. Beyond the total activity, the method allows measurements of the processes over depth, as a profile into the sediment. DCF increased with depth in our profiles, indicating a predominance of anoxic processes. In addition, the method can yield information about the extent (DIC)-C-14 was allocated into the bacterial proteins (DCFp). Slurry and stratified core incubations were compared and yielded similar results for total DCF activity.

This research evaluated the effect of flooding on the microphytobenthos community structure in a microbial mat from a tropical salt flat. Field samples were collected during four consecutive days: on the first three days the salt flat was dry, on the fourth day it was flooded by rain. In order to evaluate the community maintained in flood conditions, samples from this area were collected and kept in the laboratory for 10 days with sea water. The results of total abundance of microphytobenthos varied from 4.2 × 108 to 2.9 × 109 organisms L–1, total density increased one order of magnitude under the effect of water for both situations of precipitation in the salt flat and in experimental conditions, an increase due to the high abundance of Microcoleus spp. Shannon index (H’) was higher during the desiccation period. Our data suggest that changes in the abundance of organisms were due to the effect of water. The dominance of the most abundant taxa remained the same under conditions of desiccation and influence of water, and there is probably a consortium of microorganisms in the microbial mat that helps to maintain these dominances. Resumo Esse trabalho avaliou os efeitos da inundação na estrutura da comunidade microfitobentônica de um tapete microbiano em uma planície hipersalina tropical. As amostragens foram realizadas no campo durante quatro dias consecutivos: nos três primeiros dias o local estava seco e no quarto dia foi inundando com chuva. Para avaliar a comunidade mantida em condições de inundação, foram coletadas amostras dessa região, sendo mantidas em laboratório por 10 dias com água do mar. Os resultados mostraram que a abundância total do microfitobentos variou de 4.2 × 108 a 2.9 × 109 organismos L–1, a densidade aumentou em uma ordem de grandeza com a influência da água, tanto na planície hipersalina como nas condições experimentais, um aumento que foi devido às maiores abundâncias de Microcoleus spp. O índice de Shannon (H’) foi mais elevado durante o período de dessecação. Nossos dados sugerem que as mudanças na abundância dos organismos foram devidas ao efeito da água, a dominância dos táxons mais abundantes permaneceu a mesma durante as condições de dessecação e inundação, e possivelmente existe um consórcio entre os microrganismos do tapete microbiano no qual eles ajudam a manter essa dominância.

We studied the methanogenic pathway and archaeal community composition in the sediment of two clearwater lakes, Lake Batata and Lake Mussura, in Amazonia. We measured CH4 production and d13 Co f CO2 ,C H4, and acetate-methyl in the presence and absence of CH3F, an inhibitor of acetotrophic methanogenesis. The fractionation factor of methanogenesis from CO2 was rather high in both lake sediments, which was consistent with the low concentrations of H2 and the small negative Gibbs free energy of hydrogenotrophic methanogenesis. The d13C of acetate-methyl was relatively low compared to that of organic matter and decreased further upon inhibition of acetate consumption by CH3F. Collectively, the data possibly suggest involvement of syntrophic acetate oxidation besides acetotrophic methanogenesis. The isotopic data were used to calculate the percent contribution of CO2 reduction to total methanogenesis, which was rather high (approximately 53–63%). Copy numbers of bacterial and archaeal 16S ribosomal ribonucleic acid (rRNA) genes were about 10-fold higher in Lake Mussura than in Lake Batata, indicating that microbial numbers were not a limiting factor for production rates of CH4, which were similar in both lake sediments. The composition of the archaeal community was analyzed by cloning and sequencing of the genes coding for 16S rRNA and methyl coenzyme M reductase (mcrA), demonstrating the presence of acetotrophic Methanosaetaceae and different hydrogenotrophic methanogenic orders (Methanomicrobiales, Methanobacteriales, Methanocellales) in both lake sediments. Although methanogenic communities and pathways were principally comparable to those found in lake sediments of the midlatitudes, there were several particularities, e.g., the possible involvement of syntrophic acetate oxidation.

We performed a field experiment in a tropical humic coastal lagoon to evaluate periphyton biomass accrual and metabolism on three different substrates (1) plastic ribbons, (2) green and (3) senescent leaves of the emergent macrophyte Typha domingensis ) over 30 days. The contribution of autotrophic biomass decreased as total biomass increased over the time. Mean periphytic ash free dry weight ranged from 0.8 to 5.6 mg cm −2 , but periphyton chlorophyll a concentrations presented shorter amplitudes, which oscillated from 0.12 to 0.44 μg cm −2 throughout the experiment. Periphyton metabolism was overall heterotrophic on all substrates, especially on senescent leaves. Our data show that substrate type influenced both biomass accrual and periphyton net productivity and respiration rates throughout periphyton development and highlighted the dominance of heterotrophic metabolism. The periphyton respiration may be subsidized by both water- and substrate-derived allochthonous energy pathways, shedding light on the role of periphytic assemblages to the carbon cycling, as a source of CO 2 to the system.

The purpose of this research was to assess the effects of dredging performed in a marginal wetland colonized by aquatic macrophytes on eutrophication of the adjacent shallow tropical lake (Imboassica Lake, Brazil). The river mouth of the Imboassica River that drains into Imboassica Lake had been densely colonized by aquatic vegetation dominated by Typha domingensis (Pers.) when it was dredged. Total and dissolved nitrogen and phosphorus concentrations were measured monthly over 13 years at four stations in the Imboassica river-lake system. Dredging activities reduced phosphorus and nitrogen retention at the river mouth and subsequently increased these nutrient stocks in the lake waters. Nutrient retention by non-dredged wetland was estimated to be ca. 1,200 kg year−1 (87.3 g m−2 year−1) for nitrogen and 60 kg year−1 (4.5 g m−2 year−1) for phosphorus. Our whole-lake approach suggested that dredging might intensify rather than mitigate eutrophication in shallow tropical lakes when the removal of aquatic macrophytes is coupled to the persistence of anthropogenic nutrient inputs from the watershed.

The influence of bauxite tailings on the growth and development of Oryza glumaepatula was studied in Lake Batata, a clear water lake of the Amazon. Lake Batata is an unusual lake because 30% of its total area was covered by bauxite tailings as the result of aluminum mining, influencing many communities and ecological processes. Changes in length, growth rates, total biomass production, density, culm diameter, net primary production and percentage of different plant organs of Oryza glumaepatula were studied for two consecutive flood pulses in natural and impacted areas of Lake Batata. The aim of this research was to test the hypothesis that the growth and development of this aquatic macrophyte is negatively affected in the areas impacted by bauxite tailings. This hypothesis was rejected because most studied parameters were higher in the impacted area, indicating that the growth and development of O. glumaepatula was not negatively affected by the presence of the bauxite tailings. The better development of O. glumaepatula in the impacted area was attributed to the less available space for germination than in the natural area. The lower density of individuals at the impacted area prevented future density dependent mortality that was observed in the natural areas and did not seem to occur in the impacted area.

Dissolved organic carbon (DOC) photochemical reactions establish important links between DOC and planktonic bacteria. We hypothesize that seasonal changes in DOC quality, related to the flood pulse, drive the effects of light–DOC interactions on uptake by planktonic bacteria uptake in clear-water Amazonian ecosystems. Water samples from two ecosystems (one lake and one stream) were incubated in sunlight during different hydrological periods and were then exposed to bacterial degradation. Photochemical and bacterial degradation were driven by seasonal DOC inputs. Bacterial mineralization was the main degradation pathway of autochthonous DOC in the lake, while allochthonous DOC was more available for photochemical oxidation. We suggest that sunlight enhances the bacterial uptake of refractory DOC but does not alter uptake of labile forms. We also observed a positive relationship between sunlight and bacterial degradation of DOC, instead of competition. We conclude that photochemical reactions and bacteria complementarily degrade the different sources of DOC during the flood pulse in Amazonian clear-water aquatic ecosystems.

The study of of the distribution of microorganisms through space (and time) allows evaluation of biogeographic patterns, like the species-area index (z). Due to their high dispersal ability, high reproduction rates and low rates of extinction microorganisms tend to be widely distributed, and they are thought to be virtually cosmopolitan and selected primarily by environmental factors. Recent studies have shown that, despite these characteristics, microorganisms may behave like larger organisms and exhibit geographical distribution. In this study, we searched patterns of spatial diversity distribution of bacteria and archaea in a contiguous environment. We collected 26 samples of a lake sediment, distributed in a nested grid, with distances between samples ranging from 0.01 m to 1000 m. The samples were analyzed using T-RFLP (Terminal restriction fragment length polymorphism) targeting mcrA (coding for a subunit of methyl-coenzyme M reductase) and the genes of Archaeal and Bacterial 16S rRNA. From the qualitative and quantitative results (relative abundance of operational taxonomic units) we calculated the similarity index for each pair to evaluate the taxa-area and distance decay relationship slopes by linear regression. All results were significant, with mcrA genes showing the highest slope, followed by Archaeal and Bacterial 16S rRNA genes. We showed that the microorganisms of a methanogenic community, that is active in a contiguous environment, display spatial distribution and a taxa-area relationship. Funding Agencies|National Council of Scientific and Technological Development (CNPq) (Brazil) [477260/2011-0]; Max Planck Society (Germany)

Although magnetotactic bacteria (MTB) are ubiquitous in aquatic habitats, they are still considered fastidious microorganisms with regard to growth and cultivation with only a relatively low number of axenic cultures available to date. Here, we report the first axenic culture of an MTB isolated in the Southern Hemisphere (Itaipu Lagoon in Rio de Janeiro, Brazil). Cells of this new isolate are coccoid to ovoid in morphology and grow microaerophilically in semi-solid medium containing an oxygen concentration ([O2]) gradient either under chemoorganoheterotrophic or chemolithoautotrophic conditions. Each cell contains a single chain of approximately 10 elongated cuboctahedral magnetite (Fe3O4) magnetosomes. Phylogenetic analysis based on the 16S rRNA gene sequence shows that the coccoid MTB isolated in this study represents a new genus in the Alphaproteobacteria; the name Magnetofaba australis strain IT-1 is proposed. Preliminary genomic data obtained by pyrosequencing shows that Mf. australis strain IT-1 contains a genomic region with genes involved in biomineralization similar to those found in the most closely related magnetotactic cocci Magnetococcus marinus strain MC-1. However, organization of the magnetosome genes differs from Mc. marinus.

The influence on nitrification and denitrification of oligochaete Limnodrilus sp. and Tubifex tubifex bioturbation was determined in eutrophic lake sediment from the Basin of Lake Ringsjon in southern Sweden. Nitrification and denitrification activity was compared in sieved and in undisturbed sediment cores in laboratory mesocosms at 2 different concentrations of nitrate. Nitrification and total denitrification rates were positively correlated to oligochaete biomass between 0 and 4 g dry weight m(-2) at both 33 and 268 muM nitrate in the inflowing water. Denitrification (d(w)) was relatively more stimulated by the oligochaetes at high concentrations of nitrate in the overlying water than at low nitrate concentrations. Though nitrification was enhanced by oligochaetes, this tended to reach a maximum between 3 and 5 g of oligochaete dry weight m(-2). Comparison of the enhancement of denitrification by oligochaetes with other similar studies of denitrification in eutrophic sediment bioturbated by tube-dwelling chironomids indicates that at a similar biomass oligochaetes are less effective at mobilizing nitrate to deeper sediment layers. This is explained by the different ways oligochaetes and tube-dwelling chironomids bioturbate the sediment. Sieving and homogenising the sediment had no pronounced effect on rates of denitrification and nitrification compared to undisturbed sediment. (Less)

Dredging is a catastrophic disturbance that directly affects key biological processes in aquatic ecosystems, especially in those small and shallow. In the tropics, metabolic responses could still be enhanced by the high temperatures and solar incidence. Here, we assessed changes in the aquatic primary production along a small section of low-flow tropical downstream (Imboassica Stream, Brazil) after dredging. Our results suggested that these ecosystems may show catastrophic shifts between net heterotrophy and autotrophy in waters based on three short-term stages following the dredging: (I) a strongly heterotrophic net primary production -NPP- coupled to an intense respiration -R- likely supported by high resuspended organic sediments and nutrients from the bottom; (II) a strongly autotrophic NPP coupled to an intense gross primary production -GPP- favored by the high nutrient levels and low solar light attenuation from suspended solids or aquatic macrophytes; and (III) a NPP near to the equilibrium coupled to low GPP and R rates following, respectively, the shading by aquatic macrophytes and high particulate sedimentation. In conclusion, changes in aquatic primary production could be an important threshold for controlling drastic shifts in the organic matter cycling and the subsequent silting up of small tropical streams after dredging events. Funding Agencies|Brazilian research agency FAPERJ; Brazilian research agency CAPES; Brazilian research agency CNPq; CNPq; FAPERJ

Estimates of the rates of heterotrophic nitrogen fixation (HNF) and denitrification by acetylene reduction and acetylene inhibition, respectively, were determined for the roots and culms of wild rice, Oryza glumaepatula, in Lake Batata, a lake severely impacted by the dumping of bauxite tailings into the lake basin. Two stations were established in different parts of the lake: one in a natural area and other in an impacted area of the lake. Plant assays were performed during the principle hydroperiods of dry (December) and flood (July) to determine both: a) Actual rates of HNF and denitrification, and b) potential rates of HNF after amending with glucose potential rates of denitrification after amending with glucose, glucose + nitrate, or nitrate alone. HNF was found to naturally exceed denitrification in this system. HNF and denitrification were consistently found to be greater for roots than culms but no correlation was found between rates of HNF or denitrification and water depth. It was determined that for HNF and denitrification that glucose and nitrate were the limiting factors in controlling those processes in roots and culms of O. glumaepatula . HNF and denitrification of O. glumaepatula does not appear to show differences between impacted and non-impacted areas.

The rates of denitrification and biological nitrogen fixation of the periphyton communities associated with the culms and adventitious root of Oryza glumaepatula in Lake Batata, State of Para, Brazilian Amazonia, were investigated over the course of 24 h. N2O was not detected during the period, demonstrating that denitrification was not occurring. The low concentration of nitrate in the water column was indicated as the main factor limiting the denitrification process. The rates of biological nitrogen fixation (BNF) in culms were lowest at night and early morning, while the highest values were measured at 1200 h. BNF rates in periphyton associated with adventitious roots were lowest during the morning, while highest values were measured at 1600 h. The difference in the daily patterns of BNF rates in the periphyton of culms and roots of O. glumaepatula in the euphotic zone was attributed to defferences in the availability of organic carbon which supports this process. In the periphyton of the culms, the BNF process was carried out by heterocystous cyanobacteria, which was photoautotrophs. In the periphyton of the adventitious roots, BNF was carried out by periphytic bacteria, and is heterotrophically mediated.

Close to redox boundaries, dark carbon fixation by chemoautotrophic bacteria may be a large contributor to overall carbon fixation. Still, little is known about the relative importance of this process in lake systems, in spite the potentially high chemoautotrophic potential of lake sediments. We compared rates of dark carbon fixation, bacterial production and oxygen consumption in sediments from four Swedish boreal and seven tropical Brazilian lakes. Rates were highly variable and dark carbon fixation amounted up to 80% of the total heterotrophic bacterial production. The results indicate that non-photosynthetic carbon fixation can represent a substantial contribution to bacterial biomass production, especially in sediments with low organic matter content. Funding Agencies|STINT (Sweden)||CNPq (Brazil)||Brazilian Research Council (CNPq)

We evaluated the nitrogen and phosphorus concentration of floating meadows of Eichhornia azurea and Scirpus cubensis in Lagoa do Infernao (State of Sao Paulo, Brazil). The chemical composition of these plants and of the water (littoral and limnetic zones) was determined during the period March 1987 to march 1988. During high water, the water becomes enriched by soluble nutrients and particulates washed from the flooded areas adjacent to the lake, especially from areas situated between the river and Lagoa do Infernao. The soluble allochthonous material is rapidly assimilated and stocked in the plant tissues, which results in an increase in its concentration. Besides this, it was established that the aquatic macrophytes studied utilize the nutrients dissolved in the water of the floating meadow itself, these nutrients being derived principally from their own decomposition. Since these are floating stands, the sediment does not function as a direct source of nutrients, and since concentrations in the water are low, the nutrients excreted by the aquatic macrophytes during growth and liberated during decomposition do not remain available in the water, but are rapidly absorbed by the young plants. This closed nutrient system makes possible the maintenance of the high biomass of the stands during the entire hydrological cycle.

Here we report a time series of experiments performed in a microcosm to test the response of hypersaline microbial mats to diverse atmospheric CO2 conditions. Different from most part of the literature, our study used a sample chamber were carbon dioxide concentration was controlled. Our aim was to test the effect of different atmospheric CO2 conditions in benthic gross and net primary production, and respiration. This study showed for the first time to our knowledge absolute carbon limitation in a microbial mat. Oxygen concentration profile varied from a flattened shape to almost linear when atmospheric CO2 at the chamber reached 0 ppm, with NPP reaching 0 nmol cm−3 s−1 throughout most part of the profile. In this conditions sediment community respiration represented 100% of GPP. Extreme close coupling between primary production and respiration in microbial mats can be even self-sustainable in environments with temporally no atmospheric CO2 available. When submitted to even high CO2 concentrations (550 ppm), our sample showed a characteristic shape that indicate limitation composed by a more rectilinear oxygen profile, and NPP peaks mainly restricted to deeper layers. Therefore, we suggest that phototrophic communities in aquatic shallow ecosystems can be carbon limited. This limitation could be common especially in ecosystems submitted to variable water depth conditions, like coastal lagoons and intertidal sediments.

Although only a small amount of the Earth's water exists as continental surface water bodies, this compartment plays an important role in the biogeochemical cycles connecting the land to the atmosphere. The territory of Brazil encompasses a dense river net and enormous number of shallow lakes. Human actions have been heavily influenced by the inland waters across the country. Both biodiversity and processes in the water are strongly driven by seasonal fluvial forces and/or precipitation. These macro drivers are sensitive to climate changes. In addition to their crucial importance to humans, inland waters are extremely rich ecosystems, harboring high biodiversity, promoting landscape equilibrium (connecting ecosystems, maintaining animal and plant flows in the landscape, and transferring mass, nutrients and inocula), and controlling regional climates through hydrological-cycle feedback. In this contribution, we describe the aquatic ecological responses to climate change in a conceptual perspective, and we then analyze the possible climate-change scenarios in different regions in Brazil. We also indentify some potential biogeochemical signals in running waters, natural lakes and man-made impoundments. The possible future changes in climate and aquatic ecosystems in Brazil are highly uncertain. Inland waters are pressured by local environmental changes because of land uses, landscape fragmentation, damming and diversion of water bodies, urbanization, wastewater load, and level of pollutants can alter biogeochemical patterns in inland waters over a shorter term than can climate changes. In fact, many intense environmental changes may enhance the effects of changes in climate. Therefore, the maintenance of key elements within the landscape and avoiding extreme perturbation in the systems are urgent to maintain the sustainability of Brazilian inland waters, in order to prevent more catastrophic future events.

Using experimental mesocosms, we tested the strength of bottom-up controls by nutrients and top-down controls by an omnivorous fish (Hyphessobrycon bifasciatus; family Characidae), and the interaction between them on the CO 2 partial pressure (pCO 2) in the surface waters of a tropical humic lake (Lake Cabiúnas, Brazil). The experiment included the addition of nutrients and fish to the mesocosms in a factorial design. Overall, persistent CO 2 emissions to the atmosphere, supported by an intense net heterotrophy, were observed in all treatments and replicates over the 6-week study period. The CO 2 efflux (average ± standard error) integrated over the experiment was similar among the control mesocosms and those receiving only fish or only nutrients (309 ± 2, 303 ± 16, and 297 ± 17 mmol CO 2 m -2 day -1, respectively). However, the addition of nutrients in the presence of fish resulted in a high algal biomass and daytime net autotrophy, reducing the CO 2 emissions by 35% (by 193 ± 7 mmol CO 2 m -2 day -1). These results indicate that high CO 2 emissions persist following the eutrophication of humic waters, but that the magnitude of these emissions might depend on the structure of the food web. In conclusion, fish and nutrients may act in a synergistic manner to modulate persistent CO 2 emissions from tropical humic lakes. © 2011 Springer-Verlag., This research was funded by the Brazilian government (CAPES/MEC). The authors received financial support from the Rio de Janeiro State Science Foundation (FAPERJ). This project is also a contribution to the project PQ 307734/2006-4 funded by the Brazilian National Science Foundation (CNPq).

Large amounts of the greenhouse gas methane (CH4) are produced by anaerobic mineralization of organic matter in lakes. In spite of extensive freshwater CH4 emissions, most of the CH4 is typically oxidized by methane oxidizing bacteria (MOB) before it can reach the lake surface and be emitted to the atmosphere. In turn, it has been shown that the CH4-derived biomass of MOB can provide the energy and carbon for zooplankton and macroinvertebrates. In this study, we demonstrate the presence of specific fatty acids synthesized by MOB in fish tissues having low carbon stable isotope ratios. Fish species, zooplankton, macroinvertebrates and the water hyacinth Eichhornia crassipes were collected from a shallow lake in Brazil and analyzed for fatty acids (FA) and carbon stable isotope ratios (delta C-13). The fatty acids 16:1 omega 8c, 16:1 omega 8t, 16:1 omega 6c, 16:1 omega 5t, 18:1 omega 8c and 18:1 omega 8t were used as signature for MOB. The delta C-13 ratios varied from -27.7 parts per thousand to -42.0 parts per thousand and the contribution of MOB FA ranged from 0.05% to 0.84% of total FA. Organisms with higher total content of MOB FAs presented lower delta C-13 values (i.e. they were more depleted in C-13), while organisms with lower content of MOB signature FAs showed higher delta C-13 values. An UPGMA cluster analysis was carried out to distinguish grouping of organisms in relation to their MOB FA contents. This combination of stable isotope and fatty acid tracers provides new evidence that assimilation of methane-derived carbon can be an important carbon source for the whole aquatic food web, up to the fish level. Funding Agencies|Coordination for the Improvement of Higher Education Personnel CAPES||Brazilian Science Council CNPq||Carlos Chagas Filho Foundation for Research Support of Rio de Janeiro State FAPERJ||Swedish Research Council VR

The aim of this work was to study the effect of the herbicides glyphosate, nonanoic acid, and dichlorprop-P and the insecticides potassium oil, malation and Pyretrin and their combinations on nitrification. Nitrification was measured in slurries from the eutrophic and shallow Brabrand Lake (Aarhus, Denmark), by inhibiting oxidation of nitrite to nitrate with chloride. All herbicides and insecticides influenced nitrification. The No Observed Effect Concentration (NOEC) was assessed to be 30 µg.L-1 for glyphosate and nonanoic acid and 1 µg.L-1 for dichlorprop-P. The NOEC for malation and Pyretrin on nitrification was assessed to be 3 µg.L-1. No accumulation effect on nitrification of the insecticides malation and Pyretrin, or of the studied herbicides, was observed, indicating that their environmental impact is low at reduced concentrations, even in combination. The procedure used in this study can provide a useful tool for obtaining concentration limits for pesticides or other chemicals in a short period of time. O objetivo desta pesquisa foi avaliar o efeito dos herbicidas "Glyphosate", Ácido Nonânico e "Dichlorprop-P" e dos insecticidas "Potassium oil", "Malation" e "Pyretrin" e da combinação destes compostos sobre o processo de nitrificação. As taxas de nitrificação foram mensuradas em uma mistura de água e sedimento do lago Brabrand, um lago raso e eutrófico (Aarhus, Dinamarca), por meio da inibição da oxidação do nitrito a nitrato por cloreto. Foi observada uma influência negativa de todos os herbicidas e inseticidas sobre o processo de nitrificação. A Concentração Sem Efeito Observado (CSEO) foi de 30 µg.L-1 para Glyphosate e Ácido Nonânico e 1 µg.L-1 para Dichlorprop-P. A CSEO para Malation e Pyretrin foi 3 µg.L-1. Não foi observado um efeito conjunto dos inseticidas Malation e Pyrethin e de todos os três herbicidas estudados, indicando que o impacto ambiental é baixo quando reduzidas concentrações destas substâncias estão presentes ao mesmo tempo no ambiente. O procedimento utilizado nesta pesquisa pode ser uma ferramenta útil para obtenção de limites nas concentrações de pesticidas ou outros produtos químicos em um curto período de tempo.

The aim of this research was to study the flood pulse influence and the anthropic impact caused by bauxite tailings on the chemical composition of O. glumaepatula in Batata lake (PA, Brazil). Sampling was carried out in stands of O. glumaepatula in the low-water, filling, high-water, and drawdown periods in impacted and natural areas of Batata lake. During the low-water and drawdown periods the stands of O. glumaepatula were exposed, and in the filling and high-water periods the water depth was respectively 1.4 and 3.8 m. The collected material was dried at 70ºC, ground, and concentrations of total phosphorus, total nitrogen, organic carbon, and energy content were determined. The results indicate that the biomass increase, caused by the rise in water level, has a dilution effect on nitrogen and phosphorus concentrations in O. glumaepatula. The energy contents did not present significant differences in any of the studied periods. The results suggest that from the low water to filling period, nitrogen becomes more limiting to O. glumaepatula in the impacted area, whereas phosphorus becomes more limiting in the natural area. The population of O. glumaepatula contributes to the recovery of the impacted area of Batata lake as the detritus from this species accumulates over the sediment. This accumulation impedes future re-suspension of the bauxite tailings and increases the organic matter and nutrient concentrations in the impacted sediment. O objetivo desta pesquisa foi estudar as influências do pulso de inundação e do impacto antrópico causado pelo rejeito de bauxita sobre a composição química de O. glumaepatula no lago Batata (PA, Brasil). As amostras foram realizadas em estandes de O. glumaepatula nos períodos de águas baixas, enchente, águas altas e vazante nas áreas natural e impactada desse ecossistema. Nos períodos de águas baixas e vazante, a área coletada encontrava-se exposta, enquanto nos períodos de enchente e águas altas, a profundidade da coluna d'água era de 1,4 e 3,8 m, respectivamente. O material coletado foi seco a 70ºC, moído e suas concentrações de fósforo total, nitrogênio total, carbono orgânico e conteúdo energético foram mensuradas. Os resultados indicaram que o aumento da biomassa causado pela elevação do nível d'água teve efeito diluidor sobre as concentrações de nitrogênio e fósforo em O. glumaepatula. O conteúdo energético não variou significativamente entre as áreas e os períodos estudados. Os resultados sugerem que, à medida que o nível d'água aumenta, O. glumaepatula torna-se limitada por nitrogênio na área impactada e por fósforo na área natural. A população de O. glumaepatula contribui para a recuperação da área impactada do lago Batata em decorrência do acúmulo de detritos dessa espécie sobre o sedimento, impedindo a resuspensão do rejeito de bauxita e promovendo aumento das concentrações de matéria orgânica e nutrientes.

This study was conducted to evaluate: (1) the bacterial growth and the dissolved organic carbon (DOC) uptake in an Amazonian lake (Lake Batata) at high-water and low-water periods of the flood pulse; (2) the influence of nitrogen and phosphorus (NP) additions on bacterial growth and DOC uptake in Lake Batata at two flood pulse periods; and (3) the bioavailability of the main DOC sources in Lake Batata. Lake Batata is a typical clear-water Amazonian lake, located in the watershed of Trombetas River, Central Amazon, Brazil. Bacterial batch cultures were set up with 90% 0.2-microm filtered water and 10% inoculum from Lake Batata. N-NH(4)NO(3) and P-KH(2)PO(4), with final concentrations of 50 and 5 microM, respectively, were added to the cultures, except for controls. Extra sources of DOC (e.g., algal lysate, plant leachates) were added to constitute six distinct treatments. Bacterial response was measured by maximum bacterial abundance and rates of bacterial production, respiration, DOC uptake, and bacterial growth efficiency (BGE). Bacterial growth and DOC uptake were higher in NP treatments than in controls, indicating a consistent nutrient limitation in Lake Batata. The composition of DOC also seems to be an important regulating factor of bacterial growth in Lake Batata. Seasonally, bacterial growth and DOC bioavailability were higher at low-water period, when the phytoplankton is a significant extra source of DOC, than at high-water period, when the forest is the main source of DOC. DOC bioavailability was better estimated based on the diversity and the diagenetic stage of carbon compounds than on single classes of labile compounds. Changes in BGE were better related to CNP stoichiometry in the water, and the "excess" of organic substrates was oxidized in catabolism, despite the quality of these compounds for bacterial growth. Finally, we conclude that bacterial growth and DOC uptake vary throughout the flood pulse in clear-water Amazonian ecosystems as a result of changes in nutrient concentration and in DOC composition.

The aims of this research were to determine the main limiting nutrient to bacterial growth in Imboassica lagoon, southeastern Brazil, to estimate the percentage of dissolved organic carbon (DOC) available for bacterial growth, and to determine the bacterial growth efficiency (BGE) of natural assemblages. Bacterial growth and DOC consumption were determined in batch culture experiments, in which water samples were supplemented with nitrogen and phosphorus together or separately, or incubated without nutrient additions. When added together, N and P stimulated higher bacterial growth rates and production, as well as higher DOC consumption. The BGEs and DOC consumption rates were strongly dependent on the method used to determine bacterial production. The BGE ranged from 11 to 72%. However, only a minor fraction of bulk DOC was consumed by the planktonic bacteria (from 0.7 to 3.4%). The results suggest that low availability of phosphorus and nitrogen coupled with excess organic carbon was the main factor responsible for the relatively low bacterial utilization of DOC in Imboassica lagoon. Os objetivos desta pesquisa foram: determinar o principal nutriente limitante ao crescimento bacteriano na lagoa Imboassica, estimar a porcentagem de Carbono Orgânico Dissolvido (COD) disponível para o crescimento bacteriano e determinar a Eficiência de Crescimento Bacteriano (ECB) da comunidade bacteriana. O crescimento bacteriano e o consumo de COD foram avaliados em experimentos de culturas de diluição, nos quais nitrogênio e fósforo foram adicionados às amostras de água, juntos ou separadamente, e um controle foi preparado sem adições de nutrientes. Quando adicionados juntos, N e P estimularam um maior crescimento e produção bacterianos, assim como maiores taxas de consumo de COD. ECB e taxas de consumo de COD foram fortemente dependentes do método utilizado para determinar a produção bacteriana. ECB variou de 11% a 72%, porém apenas uma pequena fração do COD total foi consumida pelas bactérias planctônicas (de 0,7% a 3,4%). Sugere-se que as baixas disponibilidades de fósforo e nitrogênio são os principais fatores responsáveis pela baixa utilização de COD pelas bactérias na lagoa Imboassica.

Lake Batata is a typical Amazonian clear water lake which has undergone anthropogenic impacts. Thirty percent of its total area has been covered with bauxite tailings. Thus, it is possible to distinguish two areas in this ecosystem: the impacted and the natural. The goal of this research was to study C, N, and P content variation and the values of biomass, length, density, and culm diameter of Oryza glumaepatula at different depths in the natural and impacted areas of Lake Batata. The results obtained in this research suggest that the availability of P and N, in both water and sediment, is lower at the shallow site when compared to the deeper sites. On the other hand, C concentrations decreased as P and N concentrations increased. This may be explained by the structural function of C in aquatic macrophytes. At shallower sites, due to the reduced water column, individuals invest in supporting structures that display high C concentrations. The higher density and biomass of O. glumaepatula at the intermediate site indicate that this area presents the best conditions for germination and establishment of individuals of this species. The chemical composition and biometric parameters of O. glumaepatula have shown that this population has higher spatial variation in the natural area. In the impacted area, the absence of significant variations in N and P concentrations in O. glumaepatula among the three sampled sites promotes higher homogeneity in the stands. The high C:P and N:P ratios indicate that, in the impacted area, P is more limiting to the development of O. glumaepatula than it is in the natural area. The reduced values of biomass and density of O. glumaepatula in the impacted area suggest that the bauxite tailings limit the development of this population. O Lago Batata é um típico lago amazônico de águas claras que sofreu impactos antropogênicos. De sua área total, 30% foi recoberta com rejeito de bauxita. Desta forma, pode-se distinguir duas áreas nesse ecossistema: impactada e natural. O objetivo desta pesquisa foi estudar a variação de C, N e P e os valores de biomassa, comprimento, densidade e diâmetro do colmo de Oryza glumaepatula em diferentes profundidades, nas áreas impactada e natural, do Lago Batata. Os resultados obtidos na pesquisa sugerem que as disponibilidades de P e N, tanto na água como no sedimento, são menores no ponto raso quando comparado com os pontos mais profundos. Por outro lado, as concentrações de C diminuíram à medida que as concentrações de P e N aumentaram. Isto pode ser explicado pela função estrutural do C em macrófitas aquáticas. Nos pontos mais rasos, devido à reduzida coluna d'água, indivíduos investem em estruturas de suporte com elevadas concentrações de C. A elevada densidade e biomassa de O. glumaepatula no ponto intermediário indica que essa área apresenta as melhores condições para germinação e estabelecimento de indivíduos dessa espécie. A composição química e os parâmetros biométricos de O. glumaepatula mostraram que essa população possui elevada variação espacial na área natural. Na área impactada, a menor variação nas concentrações de N e P nos três pontos de amostragem promove alta homogeneidade nos estandes. As altas razões C:P e N:P indicam que, na área impactada, o P é mais limitante para o desenvolvimento de O. glumaepatula do que na área natural. Os reduzidos valores de biomassa e densidade de O. glumaepatula na área impactada sugerem que o rejeito de bauxita limita o desenvolvimento dessa população.

Contains fulltext : 60185.pdf (Publisher’s version ) (Open Access) The occurrence and significance of the anammox (anaerobic ammonium oxidation) process relative to denitrification was studied in photosynthetically active sediment from 2 shallow-water estuaries: Randers Fjord and Norsminde Fjord, Denmark. Anammox accounted for 5 to 24 % of N-2 production in Randers Fjord sediment, whereas no indication was seen of the process in sediment from Norsminde Fjord, It is suggested that the presence of anammox in Randers Fjord and its absence from Norsminde Fjord is associated with differences in the availability of NO3- + NO2- (NOx-) in the suboxic zone of the sediment. In Randers Fjord, NOx- is present in the water column throughout the year and NOx- porewater profiles showed that NOx- penetrates into the suboxic zone of the sediment. In Norsminde Fjord, NOx- is absent from the water column during the summer months and, via assimilation, benthic microalgae may prevent penetration of NOx- into the suboxic zone of the sediment. Volume-specific anammox rates in Randers Fjord were comparable with rates measured previously in Skagerrak sediment by other investigators, but denitrification rates were 10 to 15 times higher. Thus, anammox contributes less to N-2, production in Randers Fjord than in Skagerrak sediment, We propose that the lower contribution of anammox in Randers Fjord is linked to the higher availability of easily accessible carbon, which supports a higher population of denitrifying bacteria. Amplification of DNA extracted from the sediment samples from Randers Fjord using planctomycete-specific primers yielded 16S rRNA gene sequences closely related to candidatus Scalindua sorokinii found in the Black Sea by other investigators. The present study thus confirms the link between the presence of bacteria affiliated with candidatus S. sorokinii and the anammox reaction in marine environments. Anammox rates in sediment with intact chemical gradients were estimated using both N-15 and microsensor techniques. Anammox rates estimated with microsensors were less than 22 % of the rates measured with isotopes. It is suggested that this discrepancy was due to the presence of fauna, because the applied N-15 technique captures total N-2 production while the microsensor technique only captures diffusion-controlled N-2 production at the sediment surface. This hypothesis was verified by consistent agreement between the methods when applied to defaunated sediments.