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Our understanding of how biodiversity influences ecosystem functioning is entering a new stage of its development through the incorporation of information about the evolutionary relatedness of species. Bacteria are prime providers of essential ecosystem services, representing an excellent model system to perform biodiversity-ecosystem function research. By using bacteria isolated from petroleum-contaminated sites, we show that communities composed of poorly related species were more productive than those containing highly related species. The nature of the forces controlling this positive effect of phylogenetic diversity on community productivity depended on the number of species in culture. In communities of two species the positive effect of phylogenetic diversity on productivity was driven by changes in the selection effect. Communities of two distantly related species were dominated by the most productive species in monoculture, whereas communities of two closely related species were dominated by the less productive species in monoculture. In communities of four species the positive effect of phylogenetic diversity on productivity was driven by changes in the complementarity effect. In communities composed of four distantly related species the influence of positive interactions such as facilitation, cross-feeding, and niche partitioning seemed to outweigh the influence of negative interactions such as interference. As a consequence the proportion of species favored by the presence of other species increased as they became less related. Multiple facets of biodiversity may influence ecosystem functioning. Here, we present evidence of an interaction between phylogenetic and taxonomic diversity on community productivity, underlining the importance of considering multiple aspects of biodiversity when studying its impact on ecosystem functioning.

The most unique feature of Earth is the existence of life, and the most extraordinary feature of life is its diversity. Approximately 9 million types of plants, animals, protists and fungi inhabit the Earth. So, too, do 7 billion people. Two decades ago, at the first Earth Summit, the vast majority of the world's nations declared that human actions were dismantling the Earth's ecosystems, eliminating genes, species and biological traits at an alarming rate. This observation led to the question of how such loss of biological diversity will alter the functioning of ecosystems and their ability to provide society with the goods and services needed to prosper.

The ecological insurance hypothesis predicts a positive effect of species richness on ecosystem functioning in a variable environment. This effect stems from temporal and spatial complementarity among species within metacommunities coupled with optimal levels of dispersal. Despite its importance in the context of global change by human activities, empirical evidence for ecological insurance remains scarce and controversial. Here we use natural aquatic bacterial communities to explore some of the predictions of the spatial and temporal aspects of the ecological insurance hypothesis. Addressing ecological insurance with bacterioplankton is of strong relevance given their central role in fundamental ecosystem processes. Our experimental set up consisted of water and bacterioplankton communities from two contrasting coastal lagoons. In order to mimic environmental fluctuations, the bacterioplankton community from one lagoon was successively transferred between tanks containing water from each of the two lagoons. We manipulated initial bacterial diversity for experimental communities and immigration during the experiment. We found that the abundance and production of bacterioplankton communities was higher and more stable (lower temporal variance) for treatments with high initial bacterial diversity. Immigration was only marginally beneficial to bacterial communities, probably because microbial communities operate at different time scales compared to the frequency of perturbation selected in this study, and of their intrinsic high physiologic plasticity. Such local "physiological insurance" may have a strong significance for the maintenance of bacterial abundance and production in the face of environmental perturbations.

The relationship between biodiversity and ecosystem functioning (BEF) has become a cornerstone of community and ecosystem ecology and an essential criterion for making decisions in conservation biology and policy planning. It has recently been proposed that evolutionary history should influence the BEF relationship because it determines species traits and, thus, species’ ability to exploit resources. Here we test this hypothesis by combining experimental evolution with a BEF experiment. We isolated 20 bacterial strains from a marine environment and evolved each to be generalists or specialists. We then tested the effect of evolutionary history on the strength of the BEF relationship with assemblages of 1 to 20 species constructed from the specialists, generalists and ancestors. Assemblages of generalists were more productive on average because of their superior ability to exploit the environmental heterogeneity. The slope of the BEF relationship was, however, stronger for the specialist assemblages because of enhanced niche complementarity. These results show how the BEF relationship depends critically on the legacy of past evolutionary events.

The influence of biodiversity on ecosystem functioning is a major concern of ecological research. However, the biodiversity-ecosystem functioning relationship has very often been studied independently from the mechanisms allowing coexistence. By considering the effects of dispersal and niche partitioning on diversity, the metacommunity perspective predicts a spatial scale-dependence of the shape of the relationship. Here, we present experimental evidence of such scale-dependent patterns. After approximately 500 generations of diversification in a spatially heterogeneous environment, we measured functional diversity (FD) and productivity at both local and regional scales in experimental source-sink metacommunities of the bacterium Pseudomonas fluorescens SBW25. At the regional scale, environmental heterogeneity yielded high levels of FD and we observed a positive correlation between diversity and productivity. At the local scale, intermediate dispersal increased local FD through a mass effect but there was no correlation between diversity and productivity. These experimental results underline the importance of considering the mechanisms maintaining biodiversity and the appropriate spatial scales in understanding its relationship with ecosystem functioning.

Resurveys of historical collecting localities have revealed range shifts, primarily leading edge expansions, which have been attributed to global warming. However, there have been few spatially replicated community-scale resurveys testing whether species' responses are spatially consistent. Here we repeated early twentieth century surveys of small mammals along elevational gradients in northern, central and southern regions of montane California. Of the 34 species we analysed, 25 shifted their ranges upslope or downslope in at least one region. However, two-thirds of ranges in the three regions remained stable at one or both elevational limits and none of the 22 species found in all three regions shifted both their upper and lower limits in the same direction in all regions. When shifts occurred, high-elevation species typically contracted their lower limits upslope, whereas low-elevation species had heterogeneous responses. For high-elevation species, site-specific change in temperature better predicted the direction of shifts than change in precipitation, whereas the direction of shifts by low-elevation species was unpredictable by temperature or precipitation. While our results support previous findings of primarily upslope shifts in montane species, they also highlight the degree to which the responses of individual species vary across geographically replicated landscapes.

This document is an editorial from the journal Frontiers in Ecology & Evolution. It discusses the importance of studying biodiversity in freshwater ecosystems and the relationship between biodiversity and ecosystem functioning. The editorial highlights the need to consider not only taxonomic diversity but also functional and phylogenetic diversity. The document includes summaries of eight papers that cover various geographic regions, ecosystem types, and organism groups. The papers explore topics such as the diversity of phytoplankton in Chinese lakes, trait patterns of benthic invertebrates in Arctic streams, and the ecological processes shaping macroinvertebrate communities in a Chinese river network. The editorial concludes by emphasizing the value of combining different measures of biodiversity to deepen our understanding of freshwater ecosystems. [Extracted from the article]

In an effort to reach a clearer mechanistic understanding of the influence of biological diversity on ecosystem functioning, research in the field is increasingly applying a trait-based approach. In this comprehensive review, I searched for and analyzed studies that focused on the relationship between biodiversity and ecosystem functioning (BEF) using a trait-based approach in freshwater phytoplankton from lentic systems (lakes, ponds, reservoirs). I found that this type of studies is very rare and included a plethora of traits, diversity metrics, statistical analyses and study locations that contributed to the high variability in the results they obtained. Overall, trait-based diversity is not a very good predictor of ecosystem functioning in freshwater lentic ecosystems. Null relationships between trait-based diversity and ecosystem functioning in freshwater lentic systems were the more frequent outcome. When significant, the amount of variation in ecosystem functioning explained by trait-based diversity was small. Still, trait-based research remains a promising approach to increase the mechanistic understanding of BEF relationships. For this purpose, studies directly testing the underlying mechanistic rationale, exploring diversity effects on the temporal stability of ecosystem functions, including multiple functions at a time, focusing more in cell size and shape and confirming the relative importance of individual trait variation for ecosystem functioning are needed. [ABSTRACT FROM AUTHOR]

Hundreds of experiments have now manipulated species richness ( SR) of various groups of organisms and examined how this aspect of biological diversity influences ecosystem functioning. Ecologists have recently expanded this field to look at whether phylogenetic diversity (PD) among species, often quantified as the sum of branch lengths on a molecular phylogeny leading to all species in a community, also predicts ecological function. Some have hypothesized that phylogenetic divergence should be a superior predictor of ecological function than SR because evolutionary relatedness represents the degree of ecological and functional differentiation among species. But studies to date have provided mixed support for this hypothesis., Here, we reanalyse data from 16 experiments that have manipulated plant SR in grassland ecosystems and examined the impact on above-ground biomass production over multiple time points. Using a new molecular phylogeny of the plant species used in these experiments, we quantified how the PD of plants impacts average community biomass production as well as the stability of community biomass production through time., Using four complementary analyses, we show that, after statistically controlling for variation in SR, PD (the sum of branches in a molecular phylogenetic tree connecting all species in a community) is neither related to mean community biomass nor to the temporal stability of biomass. These results run counter to past claims. However, after controlling for SR, PD was positively related to variation in community biomass over time due to an increase in the variances of individual species, but this relationship was not strong enough to influence community stability., In contrast to the non-significant relationships between PD, biomass and stability, our analyses show that SR per se tends to increase the mean biomass production of plant communities, after controlling for PD. The relationship between SR and temporal variation in community biomass was either positive, non-significant or negative depending on which analysis was used. However, the increases in community biomass with SR, independently of PD, always led to increased stability. These results suggest that PD is no better as a predictor of ecosystem functioning than SR., Synthesis. Our study on grasslands offers a cautionary tale when trying to relate PD to ecosystem functioning suggesting that there may be ecologically important trait and functional variation among species that is not explained by phylogenetic relatedness. Our results fail to support the hypothesis that the conservation of evolutionarily distinct species would be more effective than the conservation of SR as a way to maintain productive and stable communities under changing environmental conditions. [ABSTRACT FROM AUTHOR]

Analysing and interpreting long-term phytoplankton time series present a number of challenges, arising from potential historical inconsistencies in data collection and taxonomic identification of organisms. In a previous paper, Pomati et al. (2012) found a remarkable increase in phytoplankton diversity that coincided with oligotrophication and warming of Lake Zurich over a 32-year period. These findings were recently challenged on the basis of potential biases in detection limits and taxonomic classification over the time series (Straile, Jochimsen & Kümmerlin, 2013). We agree that being cautious with long-term phytoplankton data series is extremely important, but argue that the increase in richness detected in Lake Zurich cannot be due only to methodological bias., Following additional analysis of the Lake Zurich phytoplankton dataset, we found that the shift in taxon detection limits reported by Straile et al. (2013) is not supported by the data and stems from a rounding error in the calculation of density in the dataset available to those authors. We found a decline in the proportional abundance for common taxa, an increase in the annual prevalence of taxa and reduced community turnover over the time series. Taken together, the data clearly indicate a trend of decreasing dominance, while more taxa coexist simultaneously. We also argue that the taxonomic classification has been robust (at least at the family level) and propose a diagnostic plot that can help detect an unbiased signal of change in plankton richness through time., Straile et al. (2013) observed perfect synchrony in species occurrence between Lake Zurich and nearby Lake Walen. While we agree that such perfect synchrony in community composition can reflect a bias in the database compilation, it can also be an important ecological signal of changes in regional species pools that deserves further analysis., We conclude that the results of Pomati et al. (2012) are robust and not substantially undermined by the criticisms of Straile et al. (2013). More generally, it is indeed possible to extract meaningful signals of biodiversity change from long-term phytoplankton monitoring datasets, provided there is a clear understanding of how the data have been sampled, recorded and analysed over the history of the time series. [ABSTRACT FROM AUTHOR]

Despite their importance as ecosystem drivers, our understanding of the influence of bacterial diversity on ecosystem functioning is limited. After identifying twelve bacterial strains from two petroleum-contaminated sites, we experimentally explored the impact of biodiversity on total density by manipulating the number of strains in culture. Irrespective of the origin of the bacteria relative to the contaminant, biodiversity positively influenced total density. However, bacteria cultured in the crude oil of their origin (autochthonous) reached higher densities than bacteria from another origin (allochthonous) and the relationship between diversity and density was stronger for autochthonous bacteria. By measuring the relative contribution of each strain to total density we showed that the observed positive effect of increasing diversity on total density was mainly due to positive interactions among species and not the presence of a particular species. Our findings can be explained by the complex chemical composition of crude oil and the necessity of a diverse array of organisms with complementary enzymatic capacities to achieve its degradation. The long term exposure to a contaminant may have allowed different bacteria to become adapted to the use of different fractions of the crude, resulting in higher complementarity in resource use in autochthonous bacteria compared to allochthonous ones. Our results could help improve the success of bioaugmentation as a bioremediation technique by suggesting the use of a diversified set of autochthonous organisms. [ABSTRACT FROM AUTHOR]

Tropical high-altitude lakes are vital freshwater reservoirs in the Andean regions. They are heavily threatened by human activities that may alter their functioning and hamper the provisioning of key ecosystem services such as water supply. Despite their ecological and social relevance, we know little about these waterbodies, especially regarding the factors influencing their functioning. Here, we explored the links between several environmental variables and phytoplankton productivity, measured as chlorophyll-a concentration and total phytoplankton biovolume. For this, we sampled twenty-four tropical high-altitude lakes located over three-thousand meters above sea level in Southern Ecuador. We found that four abiotic factors combined explained 76% of the variation in chlorophyll-a concentration amongst lakes. Contrary to what studies from temperate regions suggest, taxa richness was not related to either chlorophyll-a concentrations or total phytoplankton biovolume. Moreover, phytoplankton biovolume diversity was negatively correlated to both chlorophyll-a concentrations and total phytoplankton biovolume. This was due to a very uneven distribution of productivity amongst taxa in the more productive lakes. To the best of our knowledge, this is the first attempt to explore the determinants of phytoplankton functioning in tropical high-altitude lakes. We hope that this study will help to establish a baseline for evaluating the consequences of human activities in the ecology and functioning of this vital but fragile ecosystem. Our results suggest that by modifying the abiotic and biotic parameters of tropical high-altitude lakes, human activities can indirectly impact their functioning and their capacity to provide vital ecosystem services. [ABSTRACT FROM AUTHOR]

A correction to the article "Biodiversity loss and its impact on humanity" that was published in the 2012 issue is presented.