7 results on '"European Vegetation Archive (EVA)"'
Search Results
2. Facebook groups as citizen science tools for plant species monitoring.
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Marcenò, Corrado, Padullés Cubino, Josep, Chytrý, Milan, Genduso, Emanuele, Salemi, Dario, La Rosa, Alfonso, Gristina, Alessandro Silvestre, Agrillo, Emiliano, Bonari, Gianmaria, Giusso del Galdo, Gianpietro, Ilardi, Vincenzo, Landucci, Flavia, and Guarino, Riccardo
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PLANT species , *BOTANY , *CITIZEN science , *SOCIAL networks , *ENDANGERED species , *PLANT invasions , *BIODIVERSITY , *ONLINE social networks - Abstract
Social networks offer communication channels through which people share huge amounts of primary data that can be used for scientific analyses, including biodiversity research. To understand to what extent data extracted from social networks could complement data collected for scientific purposes, it is necessary to quantify the bias of such data.We analysed which plant traits increased the probability of a wild‐growing plant species to be photographed and posted to a social network based on the data from an unstructured citizen science tool; a Facebook group focused on the vascular flora of Sicily (Italy). Then, we compared botanical data collected by this Facebook group members with data collected by scientists in 6,366 vegetation plots sampled across Sicily, stored in the EVA database.Our results suggested that data proceeding from the analysed Facebook group were affected by various sampling biases, which differed from the biases inherent to other types of biodiversity data such as those from vegetation plots.Facebook users recorded a higher proportion of red‐listed and alien species than vegetation scientists. Therefore, social networks can provide a valuable complement to the data collected by scientists for research purposes.Synthesis and applications. Despite Facebook does not support geotagging and interface for data access and analysis, it is an invaluable source of biodiversity data that could complement those collected by professional researchers. The main advantage of data from social networks is their high dynamism, as they report large amounts of species occurrences in almost real time. Therefore, citizen science data from a Facebook group where the records are curated by expert volunteers can be used (a) for monitoring population dynamics of threatened and alien species; (b) as a source of additional data on rare species occurrences, particularly for plants that are attractive for amateur botanists, such as orchids; (c) for early warning systems of potential new invasions; and (4) for phenological studies, especially at the beginning of the flowering season. [ABSTRACT FROM AUTHOR]
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- 2021
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3. Assessing sampling coverage of species distribution in biodiversity databases.
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Sporbert, Maria, Bruelheide, Helge, Seidler, Gunnar, Keil, Petr, Jandt, Ute, Austrheim, Gunnar, Biurrun, Idoia, Campos, Juan Antonio, Čarni, Andraž, Chytrý, Milan, Csiky, János, De Bie, Els, Dengler, Jürgen, Golub, Valentin, Grytnes, John‐Arvid, Indreica, Adrian, Jansen, Florian, Jiroušek, Martin, Lenoir, Jonathan, and Luoto, Miska
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SPECIES distribution , *SPACE (Architecture) , *GEODATABASES , *PLANT species , *BIODIVERSITY , *DATABASES - Abstract
Aim: Biodiversity databases are valuable resources for understanding plant species distributions and dynamics, but they may insufficiently represent the actual geographic distribution and climatic niches of species. Here we propose and test a method to assess sampling coverage of species distribution in biodiversity databases in geographic and climatic space. Location: Europe. Methods: Using a test selection of 808,794 vegetation plots from the European Vegetation Archive (EVA), we assessed the sampling coverage of 564 European vascular plant species across both their geographic ranges and realized climatic niches. Range maps from the Chorological Database Halle (CDH) were used as background reference data to capture species geographic ranges and to derive species climatic niches. To quantify sampling coverage, we developed a box‐counting method, the Dynamic Match Coefficient (DMC), which quantifies how much a set of occurrences of a given species matches with its geographic range or climatic niche. DMC is the area under the curve measuring the match between occurrence data and background reference (geographic range or climatic niche) across grids with variable resolution. High DMC values indicate good sampling coverage. We applied null models to compare observed DMC values with expectations from random distributions across species ranges and niches. Results: Comparisons with null models showed that, for most species, actual distributions within EVA are deviating from null model expectations and are more clumped than expected in both geographic and climatic space. Despite high interspecific variation, we found a positive relationship in DMC values between geographic and climatic space, but sampling coverage was in general more random across geographic space. Conclusion: Because DMC values are species‐specific and most biodiversity databases are clearly biased in terms of sampling coverage of species occurrences, we recommend using DMC values as covariates in macro‐ecological models that use species as the observation unit. [ABSTRACT FROM AUTHOR]
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- 2019
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4. GrassPlot - a database of multi-scale plant diversity in Palaearctic grasslands.
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Dengler, Jürgen, Wagner, Viktoria, Dembicz, Iwona, García-Mijangos, Itziar, Naqinezhad, Alireza, Boch, Steffen, Chiarucci, Alessandro, Conradi, Timo, Filibeck, Goffredo, Guarino, Riccardo, Janišová, Monika, Steinbauer, Manuel J., Aćić, Svetlana, Acosta, Alicia T. R., Akasaka, Munemitsu, Allers, Marc-Andre, Apostolova, Iva, Axmanová, Irena, Bakan, Branko, and Baranova, Alina
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PLANT communities , *GRASSLANDS , *VEGETATION & climate , *BIODIVERSITY , *PLANT diversity - Abstract
GrassPlot is a collaborative vegetation-plot database organised by the Eurasian Dry Grassland Group (EDGG) and listed in the Global Index of Vegetation-Plot Databases (GIVD ID EU-00-003). GrassPlot collects plot records (relevés) from grasslands and other open habitats of the Palaearctic biogeographic realm. It focuses on precisely delimited plots of eight standard grain sizes (0.0001; 0.001; ... 1,000 m?) and on nested-plot series with at least four different grain sizes. The usage of GrassPlot is regulated through Bylaws that intend to balance the interests of data contributors and data users. The current version (v. 1.00) contains data for approximately 170,000 plots of different sizes and 2,800 nested-plot series. The key components are richness data and metadata. However, most included datasets also encompass compositional data. About 14,000 plots have near-complete records of terricolous bryophytes and lichens in addition to vascular plants. At present, GrassPlot contains data from 36 countries throughout the Palaearctic, spread across elevational gradients and major grassland types. GrassPlot with its multi-scale and multi-taxon focus complements the larger international vegetationplot databases, such as the European Vegetation Archive (EVA) and the global database "sPlot". Its main aim is to facilitate studies on the scale- and taxon-dependency of biodiversity patterns and drivers along macroecological gradients. GrassPlot is a dynamic database and will expand through new data collection coordinated by the elected Governing Board. We invite researchers with suitable data to join GrassPlot. Researchers with project ideas addressable with GrassPlot data are welcome to submit proposals to the Governing Board. [ABSTRACT FROM AUTHOR]
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- 2018
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5. EUNIS Habitat Classification: Expert system, characteristic species combinations and distribution maps of European habitats
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Viktor Onyshchenko, Rosario G. Gavilán, Mirjana Ćuk, Tatiana Braslavskaya, Eleni Tryfon, Andraž Čarni, Andrey Yu. Korolyuk, Tetiana Dziuba, Anni Jašková, Milan Valachovič, Lise Maciejewski, Denys Vynokurov, Friedemann Goral, Mette Palitzsch Lund, Ali Kavgaci, Joachim Schrautzer, Els De Bie, Olga N. Demina, Pavel Novák, Elena B. Tikhonova, Michal Hájek, Jozef Šibík, I. A. Lavrinenko, Helge Bruelheide, Jan B.M.J. Jansen, Yakiv Didukh, Anna Kuzemko, Pauline Delbosc, Florian Jansen, Ulrich Graf, Lubomír Tichý, Maike Isermann, Maria Vladimirovna Lebedeva, Rania Spyropoulou, Tomáš Peterka, Daniel Dítě, Veronika Kalníková, O. V. Lavrinenko, Aleksander Marinšek, Oleg L. Kuznetsov, Constantin Mardari, Nadezhda Goncharova, Idoia Biurrun, Wolfgang Willner, Renata Ćušterevska, Valentin Golub, Gianpietro Giusso del Galdo, Laura Casella, Željko Škvorc, Stephan M. Hennekens, Domas Uogintas, Joop H.J. Schaminée, Jürgen Dengler, Jörg Ewald, Viktor A. Smagin, Maxim G. Napreenko, Vadim Prokhorov, Larisa Khanina, Zdeňka Lososová, Corrado Marcenò, Ute Jandt, Zygmunt Kącki, Remigiusz Pielech, Svetlana Aćić, Valerijus Rašomavičius, János Bölöni, Adrian Indreica, Jiří Danihelka, Solvita Rūsiņa, Gianmaria Bonari, Fabio Attorre, Kiril Vassilev, Martin Jiroušek, Steffen Boch, Tatiana Lysenko, Aaron Pérez-Haase, S. M. Yamalov, John Janssen, Ilona Knollová, Urban Šilc, Dominik Zukal, Māris Laiviņš, Emiliano Agrillo, Zvjezdana Stančić, Milan Chytrý, Sylvain Abdulhak, Mariya Kozhevnikova, Erwin Bergmeier, John S. Rodwell, Flavia Landucci, Filip Küzmič, Angela Stanisci, Douglas Evans, Maria Pilar Rodríguez Rojo, Borja Jiménez-Alfaro, Ladislav Mucina, Juan Antonio Campos, Jean Claude Gégout, Tiina Tonteri, SILVA (SILVA), AgroParisTech-Université de Lorraine (UL)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Patrimoine naturel (PatriNat), and Muséum national d'Histoire naturelle (MNHN)-Centre National de la Recherche Scientifique (CNRS)-Office français de la biodiversité (OFB)
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0106 biological sciences ,Bos- en Landschapsecologie ,coastal habitat ,diagnostic species ,distribution map ,dune vegetation, European Nature Information System (EUNIS) ,European Vegetation Archive (EVA) ,expert system ,forest ,grassland ,habitat classification ,man-made habitat ,shrubland ,vegetation database ,vegetation plot ,wetland ,Biodiversity ,Distribution (economics) ,Wetland ,computer.software_genre ,01 natural sciences ,Grassland ,Forest and Landscape Ecology ,Plant ecology ,biodiversity ,geography.geographical_feature_category ,Ecology ,Vegetation ,PE&RC ,Europe ,Geography ,Habitat ,Vegetatie, Bos- en Landschapsecologie ,Europa ,European Nature Information System (EUNIS) ,Cartography ,dune vegetation ,Habitat (Ecology) ,databases ,Hàbitat (Ecologia) ,Management, Monitoring, Policy and Law ,010603 evolutionary biology ,Shrubland ,vegetation ,invasions ,14. Life underwater ,577: Ökologie ,Vegetatie ,Nature and Landscape Conservation ,forests ,business.industry ,Ecologia vegetal ,wetland formalized classification ,alien plants ,15. Life on land ,Expert system ,fidelity ,example ,Vegetation, Forest and Landscape Ecology ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology ,business ,man‐made habitat ,computer ,010606 plant biology & botany - Abstract
Aim The EUNIS Habitat Classification is a widely used reference framework for European habitat types (habitats), but it lacks formal definitions of individual habitats that would enable their unequivocal identification. Our goal was to develop a tool for assigning vegetation-plot records to the habitats of the EUNIS system, use it to classify a European vegetation-plot database, and compile statistically-derived characteristic species combinations and distribution maps for these habitats. Location Europe. Methods We developed the classification expert system EUNIS-ESy, which contains definitions of individual EUNIS habitats based on their species composition and geographic location. Each habitat was formally defined as a formula in a computer language combining algebraic and set-theoretic concepts with formal logical operators. We applied this expert system to classify 1,261,373 vegetation plots from the European Vegetation Archive (EVA) and other databases. Then we determined diagnostic, constant and dominant species for each habitat by calculating species-to-habitat fidelity and constancy (occurrence frequency) in the classified data set. Finally, we mapped the plot locations for each habitat. Results Formal definitions were developed for 199 habitats at Level 3 of the EUNIS hierarchy, including 25 coastal, 18 wetland, 55 grassland, 43 shrubland, 46 forest and 12 man-made habitats. The expert system classified 1,125,121 vegetation plots to these habitat groups and 73,188 to other habitats, while 63,064 plots remained unclassified or were classified to more than one habitat. Data on each habitat were summarized in factsheets containing habitat description, distribution map, corresponding syntaxa and characteristic species combination. Conclusions EUNIS habitats were characterized for the first time in terms of their species composition and distribution, based on a classification of a European database of vegetation plots using the newly developed electronic expert system EUNIS-ESy. The data provided and the expert system have considerable potential for future use in European nature conservation planning, monitoring and assessment. The previous versions of the expert system and related reports were produced within a contract from the European Environment Agency to Wageningen Environmental Research and Masaryk University. The opinions expressed are those of the contractor and do not represent the Agency's official position. EVA data management and preparation of this paper were supported by the Czech Science Foundation (project no. 19-28491X to MC, LT, IK, TP, CM, JDa, MH, PN, DZ, GB, AJ, AKu, ZL and DV). IB and JAC were supported by the Basque Government (project no. T936-16). TB, ET, and LK were supported by the Ministry of Science and Higher Education of the Russian Federation (TB and ET project no. AAAA-A18-118052590019-7; LK project no. AAAA-A19-119012490096-2).
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- 2020
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6. Circummed pine forest database: An electronic archive for mediterranean and submediterranean pine forest vegetation data
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Adriano Stinca, Milan Chytrý, Yakiv Didukh, Daniele Viciani, Riccardo Guarino, Coşkun Sağlam, Alicia Teresa Rosario Acosta, José Carlos Costa, Ilona Knollová, Carlos Neto, S. Pesaresi, Marco Landi, Erwin Bergmeier, Stephan M. Hennekens, Emanuele Fanfarillo, Federico Selvi, Andrea Bertacchi, Claudia Turcato, Süleyman Çoban, Pavla Vlčková, Fotios Xystrakis, Alexandros Sotiriou, Bonari Gianmaria, Rossen Tzonev, Claudia Angiolini, Daniela Gigante, Leonardo Rosati, Bonari, G, Knollová, I, Vlčková, P, Xystrakis, F, Çoban, S, Sağlam, C, Didukh, Yp, Hennekens, Sm, Acosta, Atr, Angiolini, C, Bergmeier, E, Bertacchi, A, Costa, Jc, Farfarillo, E, Gigante, D, Guarino, R, Landi, M, Neto, C, Pesaresi, S, Rosati, L, Selvi, F, Sotiriou, A, Stinca, A, Turcato, C, Tzonev, R, Viciani, V, Chytrý, M, Gianmaria, Bonari, Knollová, Ilona, Vlčková, Pavla, Xystrakis, Fotio, Çoban, Süleyman, Sağlam, Coşkun, Didukh, Yakiv P., Hennekens, Stephan M., Acosta, Alicia T. R., Angiolini, Claudia, Bergmeier, Erwin, Bertacchi, Andrea, Costa, José C., Fanfarillo, Emanuele, Gigante, Daniela, Guarino, Riccardo, Landi, Marco, Neto, Carlos S., Pesaresi, Simone, Rosati, Leonardo, Selvi, Federico, Sotiriou, Alexandro, Stinca, Adriano, Turcato, Claudia, Tzonev, Rossen, Viciani, Daniele, Chytrý, Milan, and Acosta, Alicia T.R.
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0106 biological sciences ,Mediterranean climate ,Vegetation classification ,Bos- en Landschapsecologie ,Biodiversity ,Plant Science ,computer.software_genre ,01 natural sciences ,Mediterranean Basin ,Turboveg ,Relevé ,medicine ,Forest and Landscape Ecology ,Macroecology ,Pinu ,Vegetatie ,CircumMed Pine Forest Database • European Vegetation Archive (EVA) • forest vegetation • Mediterranean Basin • phytosociology • pine forest • Pinus • relevé • Turboveg • vegetation plot ,Vegetation ,Database ,Phytosociology ,15. Life on land ,Pinus ,Vegetation plot ,Geography ,Thematic map ,CircumMed Pine Forest Database ,European Vegetation Archive (EVA) ,Forest vegetation ,Pine forest ,Vegetatie, Bos- en Landschapsecologie ,Vegetation, Forest and Landscape Ecology ,medicine.symptom ,Vegetation (pathology) ,computer ,010606 plant biology & botany - Abstract
Large thematic databases of vegetation plots are increasingly needed for vegetation studies and biodiversity research. In this paper, we present the CircumMed Pine Forest Database (GIVD ID: EU-00-026), which in November 2018, comprised records from 6317 pine-dominated vegetation plots (relevés) and associated vegetation types from 20 countries of the Mediterranean Basin, Near East and Crimea. These vegetation plots were collected through a detailed literature search for plots not previously included in the European Vegetation Archive (EVA), in order to fill geographic gaps in data coverage. The database comprises Mediterranean (including Oromediterranean) pine-forest vegetation plots from both published and unpublished sources. All vegetation plots are georeferenced, although coordinates vary in accuracy. The database is accessible through EVA or from its Custodian. We anticipate the CircumMed Pine Forest Database will be a valuable resource for various types of broad-scale studies in the fields of vegetation classification, plant invasion ecology, macroecology and biological conservation. Abbreviations: EU = European Union; EVA = European Vegetation Archive; EVS = European Vegetation Survey; GIVD = Global Index of Vegetation-Plot Databases.
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- 2019
7. Alpha diversity of vascular plants in European forests
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Valerijus Rašomavičius, Emiliano Agrillo, Jens-Christian Svenning, Marcela Řezníčková, Thomas Wohlgemuth, Grzegorz Swacha, Jonathan Lenoir, Roberto Venanzoni, Urban Šilc, Ilona Knollová, Joop H.J. Schaminée, Milan Chytrý, Wolfgang Willner, Adrian Indreica, Panayotis Dimopoulos, Federico Fernández-González, Kiril Vassilev, Mirjana Ćuk, Juan Antonio Campos, Andraž Čarni, Jean Claude Gégout, Jan Divíšek, Martin Večeřa, Idoia Biurrun, John S. Rodwell, Borja Jiménez-Alfaro, Ute Jandt, Florian Jansen, Guillermo Crespo Jiménez, Jörg Ewald, Zygmunt Kącki, Masaryk University [Brno] (MUNI), Ecologie et Dynamique des Systèmes Anthropisés - UMR CNRS 7058 (EDYSAN), Université de Picardie Jules Verne (UPJV)-Centre National de la Recherche Scientifique (CNRS), University of Oviedo, Department of Plant Biology and Ecology, University of the Basque Country UPV/ EHU, Bilbao, Spain, Università degli Studi di Roma 'La Sapienza' = Sapienza University [Rome], National Institute of Biology [Ljubljana] (NIB), University of Castilla-La Mancha (UCLM), University of Novi Sad, University of Patras [Patras], Institute for Molecular Systems Biology [ETH Zurich] (IMSB), Department of Biology [ETH Zürich] (D-BIOL), Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology [Zürich] (ETH Zürich)- Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology [Zürich] (ETH Zürich), SILVA (SILVA), Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL)-AgroParisTech, Transilvania University of Brasov, Philips Research Europe - Hamburg, Sector Medical Imaging Systems, Philips Research, Martin-Luther-University Halle-Wittenberg, University of Rostock, University of Wrocław [Poland] (UWr), Nature Research Centre [Vilnius], Centre for Ecosystem Studies, University of Wageningen, Wageningen University and Research [Wageningen] (WUR), Aarhus University [Aarhus], Bulgarian Academy of Sciences (BAS), Dept Appl Biol, Università degli Studi di Perugia (UNIPG), Vienna Institute for Nature Conservation and Analyses (VINCA), and Swiss Federal Institute for Forest, Snow and Landscape Research WSL
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0106 biological sciences ,Random Forests ,plant community ,Bos- en Landschapsecologie ,Biodiversity ,01 natural sciences ,Vegetation-plot database ,Forest and Landscape Ecology ,vascular plants ,[SDV.EE]Life Sciences [q-bio]/Ecology, environment ,0303 health sciences ,Diversity ,Ecology ,biology ,European Vegetation Archive ,Vegetation ,PE&RC ,Europe ,Geography ,Plantenecologie en Natuurbeheer ,Forest vegetation ,Vegetatie, Bos- en Landschapsecologie ,species-richness patterns ,Vascular plant ,forest vegetation ,Gamma diversity ,[SDE.MCG]Environmental Sciences/Global Changes ,Plant Ecology and Nature Conservation ,[SDV.BID]Life Sciences [q-bio]/Biodiversity ,Plant community ,010603 evolutionary biology ,diversity ,03 medical and health sciences ,Species-richness patterns ,Ecology, Evolution, Behavior and Systematics ,Vegetatie ,030304 developmental biology ,European Vegetation Archive (EVA) ,predictive modelling ,vegetation-plot database ,Vascular plants ,Predictive modelling ,Species diversity ,15. Life on land ,biology.organism_classification ,Alpha diversity ,Vegetation, Forest and Landscape Ecology ,Species richness ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology - Abstract
Aim The former continental‐scale studies modelled coarse‐grained plant species‐richness patterns (gamma diversity). Here we aim to refine this information for European forests by (a) modelling the number of vascular plant species that co‐occur in local communities (alpha diversity) within spatial units of 400 m2; and (b) assessing the factors likely determining the observed spatial patterns in alpha diversity. Location Europe roughly within 12°W–30°E and 35–60°N. Taxon Vascular plants. Methods The numbers of co‐occurring vascular plant species were counted in 73,134 georeferenced vegetation plots. Each plot was classified by an expert system into deciduous broadleaf, coniferous or sclerophyllous forest. Random Forest models were used to map and explain spatial patterns in alpha diversity for each forest type separately using 19 environmental, land‐use and historical variables. Results Our models explained from 51.0% to 70.9% of the variation in forest alpha diversity. The modelled alpha‐diversity pattern was dominated by a marked gradient from species‐poor north‐western to species‐rich south‐eastern Europe. The most prominent richness hotspots were identified in the Calcareous Alps and adjacent north‐western Dinarides, the Carpathian foothills in Romania and the Western Carpathians in Slovakia. Energy‐related factors, bedrock types and terrain ruggedness were identified as the main variables underlying the observed richness patterns. Alpha diversity increases especially with temperature seasonality in deciduous broadleaf forests, on limestone bedrock in coniferous forests and in areas with low annual actual evapotranspiration in sclerophyllous forests. Main conclusions We provide the first predictive maps and analyses of environmental factors driving the alpha diversity of vascular plants across European forests. Such information is important for the general understanding of European biodiversity. This study also demonstrates a high potential of vegetation‐plot databases as sources for robust estimation of the number of vascular plant species that co‐occur at fine spatial grains across large areas., M.V., J.D., I.K., M.Ř. and M.C. were supported by the Czech Science Foundation (Centre of Excellence Pladias; project no. 14–36079G). I.B. and J.A.C. were supported by the Basque Government (IT936‐16). B.J.‐A. was supported by the Marie Curie Clarín‐COFUND program of the Principate of Asturias and the European Union (ACB17‐26). J.‐C.S. considers this work a contribution to his VILLUM Investigator project “Biodiversity Dynamics in a Changing World” funded by VILLUM FONDEN (grant 16549) and his Danish Council for Independent Research | Natural Sciences TREECHANGE project (grant 6108‐00078B).
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- 2019
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