25 results on '"Qingli Yang"'
Search Results
2. An aptamer and flower-shaped AuPtRh nanoenzyme-based colorimetric biosensor for the detection of profenofos
- Author
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Xin Tan, Wancui Xie, Qi Jia, Fangyuan Zhao, Wei Wu, Qingli Yang, and Xiudan Hou
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Organothiophosphates ,Electrochemistry ,Oligonucleotides ,Environmental Chemistry ,Colorimetry ,Biosensing Techniques ,Hydrogen Peroxide ,Biochemistry ,Spectroscopy ,Analytical Chemistry - Abstract
A GO grafted SSM was prepared to load the freely mobile capture probe and novel flower-shaped AuPtRh nanospheres were synthesized to be a signal probe, which were constructed to form a colorimetric biosensor for the detection of profenofos.
- Published
- 2022
3. Pseudomonas laoshanensis sp. nov., isolated from peanut field soil
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Song Yu, Lina Yu, Chushu Zhang, Xiao-Yuan Chi, Yang Weiqiang, Wang Mingqing, Zhang Jiancheng, Jiao Kun, Gong Kuijie, Qingli Yang, Jie Sun, Jie Bi, and Gui-Wen Yang
- Subjects
0303 health sciences ,biology ,Phylogenetic tree ,030306 microbiology ,Pseudomonas ,General Medicine ,biology.organism_classification ,16S ribosomal RNA ,rpoB ,Biochemistry ,Microbiology ,Pseudomonas pertucinogena ,03 medical and health sciences ,genomic DNA ,Genetics ,Molecular Biology ,Gene ,Bacteria ,030304 developmental biology - Abstract
A novel Gram-stain-negative, aerobic strain, designated Y22T, was isolated from peanut field soil in Laoshan Mountain in China. Cells of strain Y22T were rod-shaped and motile by a single flagellum. The strain was found to be oxidase- and catalase-positive. 16S rRNA gene sequence based on phylogenetic analysis indicated that strain Y22T belonged to the genus Pseudomonas, and showed the highest 16S rRNA gene sequence similarity of 99.0% to Pseudomonas pelagia JCM 15562T, followed by Pseudomonas salina JCM 19469T (98.4%), Pseudomonas sabulinigri JCM 14963T (97.9%), Pseudomonas bauzanensis CGMCC 1.9095T (97.6%) and Pseudomonas litoralis KCTC23093T (97.5%). The phylogenetic analysis based on multilocus sequence analyses with concatenated 16S rRNA, gyrB, rpoD and rpoB genes indicated that strain Y22T belonged to Pseudomonas pertucinogena lineage. The average nucleotide identity scores between strain Y22T and closely related species were 74.6–82.8%, and the Genome-to-Genome Distance Calculator scores were 16.4–44.9%. The predominant cellular fatty acids of strain Y22T were C18:1ω7c (29.6%), C17:0 cyclo (17.5%) and summed feature 3 (C16:1ω7c and/or C16:1ω6c) (17.4%). The genomic DNA G+C content was 57.9 mol%. On the basis of phenotypic characteristics, phylogenetic analyses and in silico DNA–DNA relatedness, a novel species, Pseudomonas laoshanensis sp. nov. is proposed. The type strain is Y22T (= JCM 32580T = KCTC 62385T = CGMCC 1.16552T).
- Published
- 2020
4. The inhibitory mechanism of methyl jasmonate on Aspergillus flavus growth and aflatoxin biosynthesis and two novel transcription factors are involved in this action
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Qingli Yang, Ren Yaoyao, Yiran Jiang, Fuguo Xing, Xu Li, Shujuan Luo, and Jin Jing
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Aflatoxin ,030309 nutrition & dietetics ,Mutant ,Aspergillus flavus ,Cyclopentanes ,Acetates ,03 medical and health sciences ,chemistry.chemical_compound ,0404 agricultural biotechnology ,Biosynthesis ,Aflatoxins ,Transcriptional regulation ,Oxylipins ,Mycotoxin ,Transcription factor ,0303 health sciences ,Methyl jasmonate ,biology ,04 agricultural and veterinary sciences ,biology.organism_classification ,040401 food science ,chemistry ,Biochemistry ,Food Science ,Transcription Factors - Abstract
As the most toxic and carcinogenic mycotoxin, aflatoxin B1 (AFB1) biosynthesis depends on a series of enzymatic reactions and a complicated regulatory system. Methyl jasmonate (MeJA) is one of stress associated phytohormones. In this study, MeJA could inhibit A. flavus growth and AFB1 production with a dose-dependent manner. SEM and TEM analysis indicated that morphological ultrastructure deteriorations were observed in A. flavus treated with MeJA. RNA-Seq indicated that the initial-steps aflatoxins (AFs) genes were no drastic difference, but the middle- and later- steps genes were significantly down-regulated, which might be due to the decreases of global regulators, especially AtfB. More importantly, two novel regulators (AFLA_085880 and AFLA_015850) were involved in the inhibition, and were recognized as the critically positive regulators for AFs productions. The two genes mutants also showed significantly decrease expressions of AFs cluster genes and AFs associated regulators, and subsequent AFB1 biosynthesis. This research partly clarified inhibitory mechanism of MeJA and made some contributions to the elimination of AFs contamination.
- Published
- 2020
5. Dimethylformamide Inhibits Fungal Growth and Aflatoxin B1 Biosynthesis in Aspergillus flavus by Down-Regulating Glucose Metabolism and Amino Acid Biosynthesis
- Author
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Qingli Yang, Lin Pan, Chang Peng, Jing Jin, and Fuguo Xing
- Subjects
Aflatoxin ,aflatoxins ,Aflatoxin B1 ,Health, Toxicology and Mutagenesis ,glucose metabolism ,Down-Regulation ,mechanism ,lcsh:Medicine ,Aspergillus flavus ,Oxidative phosphorylation ,Toxicology ,dimethylformamide ,Article ,Oxidative Phosphorylation ,03 medical and health sciences ,chemistry.chemical_compound ,Biosynthesis ,Gene Expression Regulation, Fungal ,RNA-Seq ,Amino Acids ,Amino acid synthesis ,030304 developmental biology ,Regulator gene ,chemistry.chemical_classification ,0303 health sciences ,biology ,amino acid biosynthesis ,030306 microbiology ,Structural gene ,lcsh:R ,food and beverages ,biology.organism_classification ,Glucose ,Biochemistry ,chemistry ,Solvents ,Dimethylformamide - Abstract
Aflatoxins (AFs) are secondary metabolites produced by plant fungal pathogens infecting crops with strong carcinogenic and mutagenic properties. Dimethylformamide (DMF) is an excellent solvent widely used in biology, medicine and other fields. However, the effect and mechanism of DMF as a common organic solvent against fungal growth and AFs production are not clear. Here, we discovered that DMF had obvious inhibitory effect against A. flavus, as well as displayed complete strong capacity to combat AFs production. Hereafter, the inhibition mechanism of DMF act on AFs production was revealed by the transcriptional expression analysis of genes referred to AFs biosynthesis. With 1% DMF treatment, two positive regulatory genes of AFs biosynthetic pathway aflS and aflR were down-regulated, leading to the suppression of the structural genes in AFs cluster like aflW, aflP. These changes may be due to the suppression of VeA and the subsequent up-regulation of FluG. Exposure to DMF caused the damage of cell wall and the dysfunction of mitochondria. In particular, it is worth noting that most amino acid biosynthesis and glucose metabolism pathway were down-regulated by 1% DMF using Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis. Taken together, these RNA-Seq data strongly suggest that DMF inhibits fungal growth and aflatoxin B1 (AFB1) production by A. flavus via the synergistic interference of glucose metabolism, amino acid biosynthesis and oxidative phosphorylation.
- Published
- 2020
6. Ethanol Inhibits Aflatoxin B1 Biosynthesis in Aspergillus flavus by Up-Regulating Oxidative Stress-Related Genes
- Author
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Yaoyao Ren, Jing Jin, Mumin Zheng, Qingli Yang, and Fuguo Xing
- Subjects
Microbiology (medical) ,Aflatoxin ,lcsh:QR1-502 ,Aspergillus flavus ,medicine.disease_cause ,Microbiology ,lcsh:Microbiology ,03 medical and health sciences ,Gene cluster ,medicine ,oxidative stress ,Transcription factor ,Original Research ,030304 developmental biology ,Regulator gene ,0303 health sciences ,biology ,030306 microbiology ,Chemistry ,Structural gene ,food and beverages ,biology.organism_classification ,Aspergillus parasiticus ,Biochemistry ,aflatoxin B1 ,ethanol ,RNA-seq ,transcriptome ,Oxidative stress - Abstract
As the most carcinogenic, toxic, and economically costly mycotoxins, aflatoxin B1 (AFB1) is primarily biosynthesized by Aspergillus flavus and Aspergillus parasiticus. Aflatoxin biosynthesis is related to oxidative stress and functions as a second line of defense from excessive reactive oxygen species. Here, we find that ethanol can inhibit fungal growth and AFB1 production by A. flavus in a dose-dependent manner. Then, the ethanol’s molecular mechanism of action on AFB1 biosynthesis was revealed using a comparative transcriptomic analysis. RNA-Seq data indicated that all the genes except for aflC in the aflatoxin gene cluster were down-regulated by 3.5% ethanol. The drastic repression of aflatoxin structural genes including the complete inhibition of aflK and aflLa may be correlated with the down-regulation of the transcription regulator genes aflR and aflS in the cluster. This may be due to the repression of several global regulator genes and the subsequent overexpression of some oxidative stress-related genes. The suppression of several key aflatoxin genes including aflR, aflD, aflM, and aflP may also be associated with the decreased expression of the global regulator gene veA. In particular, ethanol exposure caused the decreased expression of stress response transcription factor srrA and the overexpression of bZIP transcription factor ap-1, C2H2 transcription factors msnA and mtfA, together with the enhanced levels of anti-oxidant enzymatic genes including Cat, Cat1, Cat2, CatA, and Cu, Zn superoxide dismutase gene sod1. Taken together, these RNA-Seq data strongly suggest that ethanol inhibits AFB1 biosynthesis by A. flavus via enhancing fungal oxidative stress response. In conclusion, this study served to reveal the anti-aflatoxigenic mechanisms of ethanol in A. flavus and to provide solid evidence for its use in controlling AFB1 contamination.
- Published
- 2020
7. Isolation and expression analyses of methyl-d-erythritol 4-phosphate (MEP) pathway genes from Haematococcus pluvialis
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Wei Zhang, Jiansheng Yu, Naihao Ye, Dong Xu, Qingli Yang, Xiao Fan, Zhongliang Su, Chengwei Liang, and Xiaowen Zhang
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0301 basic medicine ,chemistry.chemical_classification ,Haematococcus pluvialis ,ATP synthase ,biology ,Kinase ,Plant Science ,Aquatic Science ,biology.organism_classification ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,Enzyme ,chemistry ,Biochemistry ,Astaxanthin ,Gene expression ,biology.protein ,Carotenoid ,Gene - Abstract
Haematococcus pluvialis is a green alga known to accumulate the keto-carotenoid astaxanthin under stress conditions. In H. pluvialis, carotenoids are derived from isopentenyl diphosphate (IPP), which is synthesized via the non-mevalonate methyl-d-erythritol 4-phosphate (MEP) pathway. The present study revealed that several treatments caused changes in pigment profiles and the expression levels of genes encoding MEP pathway enzymes. Additionally, photosynthesis fluorescence was monitored. Generally, under stress conditions, there was an increase in astaxanthin, along with a decrease in total chlorophyll and photo capacity. Six IPP biosynthetic genes were cloned from H. pluvialis. Expression analysis revealed that these transcripts were upregulated under stress culture conditions. However, the extent of MEP pathway gene expression varied with the stress conditions. 4-Diphosphocytidyl-2-C-methyl-d-erythritol (CDP-ME) synthase (CMS) and CDP-ME kinase (CMK) exhibited significantly higher transcriptional expression under nitrogen starvation treatments. While 1-deoxy-d-xylulose 5-phosphate (DXP) synthase (DXS), CMS, CMK 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), and HMBPP reductoisomerase (HDR) showed significant upregulation on the second day under nitrogen starvation and high light (HL-N). The enhanced expression of these genes was also observed on the third day under high light. The high expression of MEP pathway genes was correlated with the accumulation of astaxanthin under HL-N stress. This is the first report of the isolation of IPP biosynthetic genes and their differential expression in H. pluvialis under stress conditions. The present study revealed the influence of stress conditions on the expression of MEP pathway genes and changes in pigment profiles.
- Published
- 2015
8. Functional Analysis of the Phosphoenolpyruvate Carboxylase on the Lipid Accumulation of Peanut (Arachis hypogaea L.) Seeds
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Yang Zhen, Shan-lin Yu, Mingna Chen, Chen Na, Xiaoyuan Chi, Ya-nan He, Lijuan Pan, Wang Mian, Wang Tong, and Qingli Yang
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PEPC activity ,Agriculture (General) ,Plant Science ,Biochemistry ,S1-972 ,chemistry.chemical_compound ,Food Animals ,Protein biosynthesis ,Citrate synthase ,peanut (Arachis hypogaea L.) ,Gene ,phosphoenolpyruvate carboxylase ,Fatty acid synthesis ,Ecology ,biology ,lipid accumulation ,food and beverages ,Arachis hypogaea ,chemistry ,biology.protein ,Animal Science and Zoology ,Phosphoenolpyruvate carboxylase ,Phosphoenolpyruvate carboxykinase ,Agronomy and Crop Science ,Pyruvate kinase ,Food Science - Abstract
Phosphoenolpyruvate carboxylase (PEPC; EC 4.1.1.31) catalyses phosphoenolpyruvate (PEP) to yield oxaloacetate, which is involved in protein biosynthesis. Pyruvate kinase (PK; EC 2.7.1.40) catalyzes PEP to yield pyruvate, which is involved in fatty acid synthesis. In this study, five PEPC genes (AhPEPC1, AhPEPC2, AhPEPC3, AhPEPC4, and AhPEPC5) from peanut have been cloned. Using a quantitative real-time RT-PCR approach, the expression pattern of each gene was monitored during the seed development of four peanut varieties (E11, Hebeigaoyou, Naihan 1, and Huayu 26). It was found that these five genes shared similar expression behaviors over the developmental stages of E11 with high expression levels at 30 and 40 d after pegging (DAP); whereas these five genes showed irregular expression patterns during the seed development of Hebeigaoyou. In Naihan 1 and Huayu 26, the expression levels of the five genes remained relatively high in the first stage. The PEPC activity was monitored during the seed development of four peanut varieties and seed oil content was also characterized during whole period of seed development. The PEPC activity followed the oil accumulation pattern during the early stages of development but they showed a significantly negative correlation thereafter. These results suggested that PEPC may play an important role in lipid accumulation during the seed development of four peanut varieties tested.
- Published
- 2013
9. Purification and Identification of a Natural Lectin from the Seed of Peanut Arachis hypogaea
- Author
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Jie Bi, Jie Sun, Chushu Zhang, Lina Yu, Feng Zhu, and Qingli Yang
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Materials science ,biology ,Molecular mass ,Hypogaea ,food and beverages ,Lectin ,biology.organism_classification ,Arachis hypogaea ,chemistry.chemical_compound ,Biochemistry ,Affinity chromatography ,chemistry ,biology.protein ,General Materials Science ,Raffinose ,Melibiose ,Neuraminidase - Abstract
A natural lectin from the seed of peanut Arachis hypogaea was purified by singlestep affinity chromatography using galactoside-coupled agarose. The native molecular mass of purified A. hypogaea lectin (PN-L) was 29 kDa. The lectin PN-L was detected for agglutinating activity, glycoinhibiting action and thermostability. The influence of pH on those activities was also tested. The results showed that PN-L could not agglutinate three kinds of human erythrocytes. But it showed a strong affinity to human A, B and O erythrocytes (RBC) treated by neuraminidase. Agglutinating activity of PN-L to neuraminidase treated human O erythrocytes was inhibited by lactose, raffinose, melibiose and D-galactose. The agglutinating activity of peanut seed lectin was stable up to 55°C and at pH 5.0-11.0. The results of MALDI-TOF- TOF analysis indicated that the protein PN-L showed highly homology with the Peanut Lectin Chain A protein (gi|1942899).
- Published
- 2011
10. Genome-Wide Analysis of Fatty Acid Desaturases in Soybean (Glycine max)
- Author
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Yandu Lu, Shanlin Yu, Jinyan Wang, Xiaoyuan Chi, Qingfen Zhang, Lijuan Pan, Qingli Yang, Yanan He, and Mingna Chen
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Genetics ,biology ,Microarray analysis techniques ,food and beverages ,Plant Science ,Proteomics ,biology.organism_classification ,Genome ,Metabolomics ,Fatty acid desaturase ,Biochemistry ,Phylogenetics ,Arabidopsis ,biology.protein ,Molecular Biology ,Gene - Abstract
Fatty acid desaturases can introduce double bonds into the hydrocarbon chains of fatty acids to produce unsaturated fatty acids. In the present study, 29 full-length desaturase genes were identified from soybean genome by a thorough annotation exercise. A comprehensive analysis was performed to characterize phylogeny, chromosomal locations, structures, conserved motifs, and expression patterns of those genes. The soybean genes were phylogenetically clustered into nine subfamilies with the Arabidopsis counterparts, FAB2, FAD2, FAD3, FAD5, FAD6, FAD7, FAD8, SLD1, and DES1. Twenty-nine desaturase genes were found to be distributed on at least 15 of the 20 soybean chromosomes. The gene structures and motif compositions were considerably conserved among the subfamilies. The majority of desaturase genes showed specific temporal and spatial expression patterns across different tissues and developmental stages based on microarray data analyses. The study may provide new insights into the origin and evolution of fatty acid biosynthesis pathways in higher plants. Additionally, the characterization of desaturases from soybean will lead to the identification of additional genes for genetic modification of plants to produce nutritionally important fatty acids.
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- 2011
11. Identification and Expression Analysis of the Phosphoenolpyruvate Carboxylase Gene Family in Peanut (Arachis hypogaea L.)
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Mingna Chen, Hongsheng Zhang, Qingli Yang, Shan-lin Yu, and Lijuan Pan
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food.ingredient ,food and beverages ,Plant Science ,Molecular cloning ,Biology ,Arachis hypogaea ,food ,Biochemistry ,Gene expression ,Peanut oil ,Gene family ,Phosphoenolpyruvate carboxykinase ,Phosphoenolpyruvate carboxylase ,Agronomy and Crop Science ,Gene - Abstract
Phosphoenolpyruvate carboxylase (PEPC) is widely distributed in plants and bacteria, and catalyzes the carboxylation of phosphoenolpyruvate to form oxaloacetate and inorganic phosphate. To investigate the molecular mechanisms of the regulation and control of peanut oil, with the degenerated primers and RACE-PCR approach, five PEPC genes were cloned from peanut, and designated as AhPEPC1, AhPEPC2, AhPEPC3, AhPEPC4, and AhPEPC5, respectively. The structure and phylogenetic analysis of PEPC protein indicated that AhPEPC1-4 genes encoded a typical plant-type PEPC-enzyme, and AhPEPC5 a bacterial-type. By real-time quantitative RT-PCR approach the expression pattern of each gene was detected in various tissues of normal and high oil-content peanut varieties. It was found that there was a lower expression level of AhPEPCs genes except for the AhPEPC2 in high-oil peanut than normal-oil peanut line. The results provide some fundamental information for the further investigation of plant PEPC proteins and their role in regulation of oil-content in peanut seeds.
- Published
- 2010
12. Comparison of the Δ12 fatty acid desaturase gene between high-oleic and normal-oleic peanut genotypes
- Author
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Qingli Yang, Zengkai Ren, Hongsheng Zhang, Lijuan Pan, Ping Min, and Shanlin Yu
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Fatty Acid Desaturases ,DNA, Complementary ,Arachis ,Genotype ,Linoleic acid ,Molecular Sequence Data ,Gene Expression ,Saccharomyces cerevisiae ,Biology ,Gene product ,chemistry.chemical_compound ,Gene Expression Regulation, Plant ,Genetics ,Amino Acid Sequence ,Cloning, Molecular ,Molecular Biology ,Gene ,Histidine ,Base Sequence ,Sequence Analysis, DNA ,Yeast ,Mutagenesis, Insertional ,Open reading frame ,Oleic acid ,Fatty acid desaturase ,Biochemistry ,chemistry ,biology.protein ,Sequence Alignment ,Oleic Acid - Abstract
Delta(12) fatty acid desaturase gene has been targeted as a logical candidate controlling the high oleate trait in peanut seeds. By RT-PCR method, the full-length cDNAs of Delta(12) fatty acid desaturase gene were isolated from peanut (Arachis hypogaea L.) genotypes with normal and high ratio of oleic to linoleic acid, which were designated AhFAD2B and AhFAD2B', respectively. Sequence alignment of their coding regions revealed that an extra A was inserted at the position +442 bp of AhFAD2B' sequence of high oleic acid genotypes, which resulted in the shift of open reading frame and a truncated protein AhFAD2B', with the loss of one histidine box involved in metal ion complex required for the reduction of oxygen. Analysis of transcript level showed that the expression of Delta(12) fatty acid desaturase gene in high oleic acid genotype was slightly lower than that in normal genotype. The enzyme activity experiment of yeast (Saccharomyces cerevisiae) cell transformed with AhFAD2B or AhFAD2B' proved that only AhFAD2B gene product showed significant Delta(12) fatty acid desaturase activity, but AhFAD2B' gene product did not. These results suggested that the change of AhFAD2B' gene sequence resulted in lower activity or deactivation of Delta(12) fatty acid desaturase in high oleic acid genotype.
- Published
- 2008
13. Characterization of peanut germin-like proteins, AhGLPs in plant development and defense
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Xuanqiang Liang, Fanghe Zhu, Ling Li, Xiaoyuan Chi, Wang Tong, Qingli Yang, Haifen Li, Shanlin Yu, and Xiaoping Chen
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Salinity ,Arachis ,Arabidopsis Thaliana ,Gene Expression ,lcsh:Medicine ,Plant Science ,Plant Genetics ,Biochemistry ,Model Organisms ,Plant Growth Regulators ,Plant and Algal Models ,Gene Expression Regulation, Plant ,Stress, Physiological ,Arabidopsis ,Gene expression ,Botany ,Genetics ,Plant defense against herbivory ,Protein Isoforms ,Arabidopsis thaliana ,Gene family ,lcsh:Science ,Biology ,Glycoproteins ,Plant Diseases ,Plant Growth and Development ,Regulation of gene expression ,Multidisciplinary ,biology ,Plant Biochemistry ,Gene Expression Profiling ,lcsh:R ,Gene Expression Regulation, Developmental ,food and beverages ,Salt Tolerance ,biology.organism_classification ,Plant Leaves ,Gene expression profiling ,Protein Transport ,Host-Pathogen Interactions ,Mutation ,Plant Biotechnology ,lcsh:Q ,Plant hormone ,Gene Function ,Research Article ,Abscisic Acid ,Aspergillus flavus - Abstract
Background Germin-like superfamily members are ubiquitously expressed in various plant species and play important roles in plant development and defense. Although several GLPs have been identified in peanut (Arachis hypogaea L.), their roles in development and defense remain unknown. In this research, we study the spatiotemporal expression of AhGLPs in peanut and their functions in plant defense. Results We have identified three new AhGLP members (AhGLP3b, AhGLP5b and AhGLP7b) that have distinct but very closely related DNA sequences. The spatial and temporal expression profiles revealed that each peanut GLP gene has its distinct expression pattern in various tissues and developmental stages. This suggests that these genes all have their distinct roles in peanut development. Subcellular location analysis demonstrated that AhGLP2 and 5 undergo a protein transport process after synthesis. The expression of all AhGLPs increased in responding to Aspergillus flavus infection, suggesting AhGLPs' ubiquitous roles in defense to A. flavus. Each AhGLP gene had its unique response to various abiotic stresses (including salt, H2O2 stress and wound), biotic stresses (including leaf spot, mosaic and rust) and plant hormone stimulations (including SA and ABA treatments). These results indicate that AhGLPs have their distinct roles in plant defense. Moreover, in vivo study of AhGLP transgenic Arabidopsis showed that both AhGLP2 and 3 had salt tolerance, which made transgenic Arabidopsis grow well under 100 mM NaCl stress. Conclusions For the first time, our study analyzes the AhGLP gene expression profiles in peanut and reveals their roles under various stresses. These results provide an insight into the developmental and defensive roles of GLP gene family in peanut.
- Published
- 2013
14. Ultrasonic-assisted enzymolysis to improve the antioxidant activities of peanut (Arachin conarachin L.) antioxidant hydrolysate
- Author
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Shaofang Liu, Lina Yu, Qingli Yang, Jie Bi, Jie Sun, and Chushu Zhang
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Antioxidant ,Hot Temperature ,Arachis ,DPPH ,medicine.medical_treatment ,response-surface optimization ,Catalysis ,Hydrolysate ,Antioxidants ,Article ,Inorganic Chemistry ,chemistry.chemical_compound ,Hydrolysis ,antioxidant activities ,Ultrasonic assisted ,medicine ,Food science ,Response surface methodology ,Subtilisins ,Physical and Theoretical Chemistry ,Molecular Biology ,Spectroscopy ,Free Radical Scavenging Activity ,Protease ,peanut antioxidant hydrolysate ,ultrasonic-assisted enzymolysis ,Chemistry ,Organic Chemistry ,food and beverages ,General Medicine ,Hydrogen-Ion Concentration ,Computer Science Applications ,Sound ,Biochemistry - Abstract
The objective of this work is to provide a theoretical basis for preparing peanut antioxidant hydrolysate in order to improve its antioxidant activities. Therefore, response surface methodology (RSM) based on the Box-Behnken design was used to optimize ultrasonic-assisted enzymolysis for the purpose of preparing peanut antioxidant hydrolysate. Results indicated that the DPPH free radical scavenging activity of peanut hydrolysate could reach 90.06% under the following optimum conditions: ultrasonic power of 150.0 w, reaction temperature of 62.0 °C, incubation time of 25.0 min, and initial pH value of 8.5. The DPPH free radical scavenging rate of peanut hydrolysate from ultrasonic-assisted enzymolysis improved comparing with that of peanut hydrolysate from protease hydrolysis alone. The peanut antioxidant hydrolysate was found to display eight improved kinds of antioxidant activities. In conclusion, the optimal ultrasonic-assisted enzymolysis technology conditions described in this paper, appear to be beneficial for preparing peanut antioxidant hydrolysate.
- Published
- 2012
15. Chemical Composition and Antioxidant Activities of Broussonetia papyrifera Fruits
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Shaofang Liu, Feng Zhu, Jie Bi, Jie Sun, Lina Yu, Qingli Yang, and Chushu Zhang
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food.ingredient ,Antioxidant ,DPPH ,medicine.medical_treatment ,Carbohydrates ,lcsh:Medicine ,Crops ,Plant Science ,Biochemistry ,Antioxidants ,Analytical Chemistry ,Lipid peroxidation ,chemistry.chemical_compound ,food ,Phenols ,medicine ,Food science ,lcsh:Science ,Biology ,Unsaturated fatty acid ,Plant Proteins ,chemistry.chemical_classification ,Multidisciplinary ,biology ,Chemistry ,Plant Biochemistry ,Food additive ,lcsh:R ,Fatty Acids ,Fatty acid ,Agriculture ,Free Radical Scavengers ,Broussonetia ,biology.organism_classification ,Fruit ,lcsh:Q ,Oxidation-Reduction ,Research Article - Abstract
Fruits of Broussonetia papyrifera from South China were analyzed for their total chemical composition, and antioxidant activities in ethanol and aqueous extracts. In the fruit of this plant, the crude protein, crude fat and carbohydrates was 7.08%, 3.72% and 64.73% of dry weight, respectively. The crude protein, crude fat and carbohydrates were 15.71%, 20.51% and 36.09% of dry weight, respectively. Fatty acid and amino acid composition of the fruit were analyzed. Unsaturated fatty acid concentration was 70.6% of the total fatty acids. The percentage of the essential amino acids (EAAs) was 40.60% of the total amino acids. Furthermore, B. papyrifera fruit are rich in many mineral elements and vitamins. Total phenolic content was assessed using the Folin-Ciocalteau assay, whereas antioxidant activities were assessed by measuring the ability of the two extracts to scavenge DPPH radicals, inhibit peroxidation, and chelate ferric ions. Their reducing power was also assessed. Results indicated that the aqueous extract of B. papyrifera was a more potent reducing agent and radical-scavenger than the ethanol extract. GC-MS analysis of the ethanol extract showed the presence of some acid-containing compounds. The changes in total phenolic content and antioxidant capacity in B. papyrifera from four different regions grown under normal conditions were assessed. The antioxidant activity of different extracts was positively associated with their total phenolic content. These results suggest that the fruit of B. papyrifera could be used in dietary supplement preparations, or as a food additive, for nutritional gain, or to prevent oxidation in food products.
- Published
- 2012
16. Identification and Characterization of microRNAs from Peanut (Arachis hypogaea L.) by High-Throughput Sequencing
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Yang Zhen, Xiaoping Chen, Jinyan Wang, Lijuan Pan, Shanlin Yu, Xiaoyuan Chi, Yanan He, Mingna Chen, Qingli Yang, and Xuanqiang Liang
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Small RNA ,Arachis ,Sequence analysis ,lcsh:Medicine ,Gene Expression ,Biology ,Real-Time Polymerase Chain Reaction ,Biochemistry ,DNA sequencing ,Deep sequencing ,Molecular Genetics ,Nucleic Acids ,microRNA ,Molecular Cell Biology ,Databases, Genetic ,Genetics ,Gene Regulation ,lcsh:Science ,Gene ,Multidisciplinary ,Sequence Analysis, RNA ,Gene Expression Profiling ,lcsh:R ,RNA ,food and beverages ,Computational Biology ,High-Throughput Nucleotide Sequencing ,Gene expression profiling ,MicroRNAs ,Organ Specificity ,RNA, Plant ,lcsh:Q ,Plant Biotechnology ,Gene Function ,Sequence Analysis ,Research Article ,Biotechnology - Abstract
Background MicroRNAs (miRNAs) are noncoding RNAs of approximately 21 nt that regulate gene expression in plants post-transcriptionally by endonucleolytic cleavage or translational inhibition. miRNAs play essential roles in numerous developmental and physiological processes and many of them are conserved across species. Extensive studies of miRNAs have been done in a few model plants; however, less is known about the diversity of these regulatory RNAs in peanut (Arachis hypogaea L.), one of the most important oilseed crops cultivated worldwide. Results A library of small RNA from peanut was constructed for deep sequencing. In addition to 126 known miRNAs from 33 families, 25 novel peanut miRNAs were identified. The miRNA* sequences of four novel miRNAs were discovered, providing additional evidence for the existence of miRNAs. Twenty of the novel miRNAs were considered to be species-specific because no homolog has been found for other plant species. qRT-PCR was used to analyze the expression of seven miRNAs in different tissues and in seed at different developmental stages and some showed tissue- and/or growth stage-specific expression. Furthermore, potential targets of these putative miRNAs were predicted on the basis of the sequence homology search. Conclusions We have identified large numbers of miRNAs and their related target genes through deep sequencing of a small RNA library. This study of the identification and characterization of miRNAs in peanut can initiate further study on peanut miRNA regulation mechanisms, and help toward a greater understanding of the important roles of miRNAs in peanut.
- Published
- 2011
17. Antioxidant activity and phenolic compounds of Holotrichia parallela Motschulsky extracts
- Author
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Jie Bi, Lina Yu, Feng Zhu, Chushu Zhang, Jie Sun, Qingli Yang, Mingjing Qu, and Shaofang Liu
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China ,Antioxidant ,Traditional medicine ,Chemistry ,Crop pest ,DPPH ,medicine.medical_treatment ,In vitro toxicology ,Catechin ,General Medicine ,Holotrichia parallela ,Antioxidants ,Analytical Chemistry ,Lipid peroxidation ,Coleoptera ,chemistry.chemical_compound ,Nutraceutical ,Biochemistry ,Phenols ,medicine ,Animals ,Medicine, Chinese Traditional ,Food Science - Abstract
Insects have been relatively unexplored as potential sources of natural antioxidants. We report the antioxidant activity of extracts of the adult large black chafer beetle Holotrichia parallela Motschulsky, a common crop pest in China. The antioxidant activity of the ethanolic extract (EE) and the water extract (WE) of adult H. parallela were evaluated by four different in vitro assays. EE showed potent metal-chelating activity and inhibition of lipid peroxidation. WE proved to be an excellent antioxidant in the scavenging of 2,2-diphenyl-1-picrylhydrazyl (DPPH) radicals and metal-chelating activity. Catechin was identified in the ethanolic extract and proteins were the main components in the water extracts. Both compounds could contribute to the antioxidant activity of the species. These results suggest that adult H. parallela might be used as a nutraceutical to alleviate oxidate-induced diseases and as a natural antioxidant additive in the food industry.
- Published
- 2011
18. Isolation and characterization of fatty acid desaturase genes from peanut (Arachis hypogaea L.)
- Author
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Xiaoyuan Chi, Yang Zhen, Qingli Yang, Shanlin Yu, Yanan He, Mingna Chen, and Lijuan Pan
- Subjects
Fatty Acid Desaturases ,DNA, Complementary ,Arachis ,Sequence analysis ,Linoleic acid ,Molecular Sequence Data ,Plant Science ,chemistry.chemical_compound ,Open Reading Frames ,Gene Expression Regulation, Plant ,Amino Acid Sequence ,Cloning, Molecular ,Peptide sequence ,Phylogeny ,Plant Proteins ,chemistry.chemical_classification ,biology ,Fatty Acids ,Fatty acid ,General Medicine ,Sequence Analysis, DNA ,Amino acid ,Arachis hypogaea ,Plant Leaves ,Fatty acid desaturase ,chemistry ,Biochemistry ,RNA, Plant ,Seeds ,biology.protein ,Heterologous expression ,Agronomy and Crop Science - Abstract
Fatty acid desaturases are responsible for the insertion of double bonds into pre-formed fatty acid chains in reactions that require oxygen and reducing equivalents. In this study, genes for FAB2, FAD2-2, FAD6 and SLD1, were cloned from peanut (Arachis hypogaea L.). The ORFs of the four genes were 1,221, 1,152, 1,329 and 1,347 bp in length, encoding 406, 383, 442 and 448 amino acids, respectively. The predicted amino acid sequences of AhFAB2, AhFAD2-2, AhFAD6, AhSLD1 shared high sequence identity of 79, 76.2, 73.4 and 61% to the corresponding ones in Arabidopsis, respectively. Heterologous expression in yeast was used to confirm the regioselectivity and the function of AhFAD2-2 and AhFAD6. Linoleic acid (18:2), normally not present in wild-type yeast cells, was detected in transformants of these two genes. Quantitative real-time RT-PCR analysis indicated that the transcript abundances of AhFAB2 and AhFAD2-1 were higher in seed than that in other tissues examined. On the other hand, transcript of AhFAD2-2, AhFAD6 and AhSLD1 showed higher abundances in leaves. In addition, these five genes showed different expression patterns during seed development. These results indicated that the five genes may have different biochemical functions during vegetative growth and seed development.
- Published
- 2010
19. Isolation, Characterization and Expression Analysis of Stearoyl-ACP Desaturase Gene from Kosteletzkya virginica
- Author
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Qingli Yang, Shanlin Yu, Xiaoyuan Chi, Lijuan Pan, Mingna Chen, and Zengkai Ren
- Subjects
Genetics ,animal structures ,biology ,Sequence analysis ,Nucleic acid sequence ,biology.organism_classification ,behavioral disciplines and activities ,Homology (biology) ,Biochemistry ,Rapid amplification of cDNA ends ,Kosteletzkya virginica ,Complementary DNA ,mental disorders ,Gene expression ,Gene - Abstract
Kosteletzkya virginica is a halophyte species which could be used for production of industrial raw material such as biodiesel and for developing ecologically sound saline agriculture as well as for tideland soil improving. Using Rapid Amplification of cDNA Ends (RACE) method, a 1610 bp cDNA of stearoyl-ACP desaturase (SAD) gene containing a 1188 bp complete open reading fragment (ORF) was firstly isolated from seeds of K. virginica. Sequence analysis revealed that the nucleotide sequence of K. virginica SAD had a high level of homology to SAD from Gossypium hirsutum, but had relative low identity to SAD from other pants. However, K. virginica SAD had a high level of amino acid sequence homology to SAD from other plants. Characteristics of the deduced protein were predicted and analyzed using bioinformatic methods. Expression analysis via real-time PCR indicated that expression levels of the SAD gene were markedly distinct in different K. virginica tissues and different development stage seeds. The results of the expression analysis in this study, combined with existing research, suggest that SAD may be involved in the regulation of plant seed growth and development. These results serve as a foundation for further studies of the mechanisms regulating SAD gene expression and could eventually lead to the development of higher quality K. virginica varieties.
- Published
- 2010
20. Molecular Cloning, Characterization and Expression Analysis of B-Ketoacyl-ACP Synthetase II Gene from Peanut
- Author
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Lijuan Pan, Qingli Yang, Xiaoyuan Chi, Mingna Chen, Shanlin Yu, Yang Zhen, and Hongsheng Zhang
- Subjects
chemistry.chemical_classification ,Cloning ,Sequence analysis ,cDNA library ,food and beverages ,Molecular cloning ,Biology ,Molecular biology ,Amino acid ,chemistry ,Rapid amplification of cDNA ends ,Biochemistry ,Complementary DNA ,Gene - Abstract
β-ketoacyl-ACP synthetase II (KAS II) which catalyzes the elongation of 16:0-ACP to 18:0-ACP,determines the ratio of palmitic acid (16:0) to stearic acid (18:0). Using Rapid Amplification of cDNA Ends (RACE) and a peanut cDNA library we had previously constructed, we isolated a 1867bp cDNA of the KAS II gene containing a 1212bp complete open reading fragment (ORF). Sequence analysis revealed that peanut KAS II had a high level of nucleotide and amino acid sequence homology to KAS II from other plants. Phylogenetic analysis showed that KAS II from plants, bacteria and virus were grouped into different clades respectively suggesting the independent evolution of KAS II from different sources. Characteristics of the deduced protein were predicted and analyzed using bioinformatic methods. The protein was predicted as stable and hydrophobic with molecular weight of 43181.4 and theoretical PI of 5.69. Expression analysis by real-time PCR indicated that expression levels of KAS II gene were markedly distinct in different peanut tissues and varieties. The expression analysis in this study combined with existing researches suggested KAS II may be involved in the regulation of plant growth and development.
- Published
- 2010
21. Molecular Characterization of Multi-Functional Acetyl Coenzyme A Carboxylase, Biotin Carboxylase and beta-Carboxyltransferase from Arachis hypogaea L
- Author
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Qingli Yang, Shanlin Yu, Yandu Lu, Feng Zhu, Xiaoyuan Chi, and Mingnan Chen
- Subjects
Biotin carboxylase ,Cyanobacteria ,chemistry.chemical_classification ,Biology ,biology.organism_classification ,Molecular biology ,Pyruvate carboxylase ,Amino acid ,chemistry.chemical_compound ,chemistry ,Biochemistry ,Glycine ,Peptide sequence ,Gene ,Fatty acid synthesis - Abstract
Acetyl-CoA carboxylase (ACCase; EC 6.4.1.2) catalyzes the synthesis of malonyl-CoA, the first intermediate in fatty acid synthesis. Genes for multi-functional acetyl-CoA carboxylase and two subunits of multi-subunit acetyl-CoA carboxylase, biotin carboxylase and β-Carboxyltransferase, have been cloned from peanut. The ORF of the three proteins are 6783bp, 1623bp, 1479 bp in length, encoding 2260, 540, 492 amino acids, respectively. The predicted amino acid sequences of the multi-functional AhACCase and AhBC from peanut shared high sequence identity, 90.9% and 88%, to the corresponding Glycine max proteins, respectively, while the amino acid sequence of AhβCT gene showed 71.6% identity with that from Nothofagus gunnii. Phylogenetic analysis showed that all of these three genes from peanut were grouped into the big branch of proteins from higher plant. Moreover, observation of the tree revealed that multi-functional ACCase genes may arise by independent gene duplication events in green algae and higher plants branches, and the biotin carboxylase and β-Carboxyltransferase genes from cyanobacteria may be the origin of genes from higher plants, mosses and eukaryotic algae.
- Published
- 2010
22. Cloning and Expression Analysis of β-ketoacyl-ACP Reductase, β-hydroxyacyl-ACP Dehydrase and Enoyl-ACP Reductase from Arachis hypogaea L
- Author
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Lijuan Pan, Shanlin Yu, Qingli Yang, Mingna Chen, Yanan He, Xiaoyuan Chi, and Yuan Gao
- Subjects
Cloning ,chemistry.chemical_classification ,food and beverages ,Biology ,Reductase ,biology.organism_classification ,Arachis hypogaea ,Amino acid ,Biochemistry ,chemistry ,Expression analysis ,Glycine ,Gene ,Bacteria - Abstract
Fatty acid biosynthesis is catalysed in most bacteria and plants by a group of highly conserved proteins known as the Type II fatty acid synthase (FAS) system. In this study, genes for β-ketoacyl-ACP reductase (KR), β-hydroxyacyl-ACP dehydrase (HD), and enoyl-ACP reductase (ENR) of Type II FAS have been cloned from peanut ( Arachis hypogaea L.). The results showed that the ORF of the three genes were 972 bp, 651 bp and 1170 bp in length, encoding 323, 216 and 389 amino acids, respectively. The predicted amino acid sequences of AhKR, AhHD, AhENR shared high sequence identity of 86.3%, 81.2% and 87.2% to the corresponding ones in Glycine max, respectively. Further investigation of quantitative real-time RT-PCR analysis suggested that AhKR, AhHD and AhENR were expressed with higher levels in leaf and seed than those in root and stem tissues. Moreover, AhKR and AhENR genes reached a maximum expression level at 25 DAP (days after pegging) and showed a downward trend thereafter. In contrast, AhHD gene expressed in an irregular course during seed development. Overall, the information generated by this study will facilitate the manipulation of the quality of oils produced in seeds of oil crops.
- Published
- 2010
23. Identification of AhAQ1 Encoding a Putative Aquaporin whose Expression is Regulated by Salt Stress In Peanut (Arachis hypogaea L.)
- Author
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Qingli Yang, Lijuan Pan, shanlin Yu, and Yan Jiang
- Subjects
chemistry.chemical_classification ,Transmembrane domain ,Water transport ,Biochemistry ,Molecular mass ,chemistry ,Sequence analysis ,Complementary DNA ,food and beverages ,Aquaporin ,Biology ,Gene ,Amino acid - Abstract
The primary role of aquaporins is to control water transport in plants, which might function in plant response against salt stress. In this research, we obtained the full-length cDNA of an aquaporin gene AhAQ1 by RT-PCR approach from salt-stressed peanut leaves. AhAQ1 encodes a protein consisting of 287 amino acids with the calculated molecular mass of 30.57 KD and the isoelectric point of 9.04. Sequence analysis indicated that AhAQ1 contained six transmembrane domains and two NPA-boxes and phylogenetic analysis showed that the AhAQ1 clusters were the same with the PIP1 family. The expression pattern of AhAQ1 in peanut tissues under high-salt treatment was examined by semi-quantitative RT-PCR, The results showed that the accumulation of AhAQ1 transcripts was induced by salt stress . The combination of these results illustrate that AhAQ1 may play a role in peanut in response to salt stress.
- Published
- 2010
24. Molecular cloning and stress-dependent expression of a gene encoding Delta(12)-fatty acid desaturase in the Antarctic microalga Chlorella vulgaris NJ-7
- Author
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Xiaoyuan Chi, Shaofang Liu, Qingli Yang, Yandu Lu, Zhaoxin Li, Song Qin, and Qinhua Gan
- Subjects
Fatty Acid Desaturases ,Salinity ,DNA, Complementary ,Linoleic acid ,Recombinant Fusion Proteins ,Chlorella vulgaris ,Molecular Sequence Data ,Antarctic Regions ,Saccharomyces cerevisiae ,Biology ,Microbiology ,chemistry.chemical_compound ,Stress, Physiological ,Complementary DNA ,Amino Acid Sequence ,RNA, Messenger ,Cloning, Molecular ,Conserved Sequence ,Phylogeny ,chemistry.chemical_classification ,Fatty acid metabolism ,Sequence Homology, Amino Acid ,Algal Proteins ,Fatty acid ,General Medicine ,Adaptation, Physiological ,Yeast ,Cold Temperature ,Fatty acid desaturase ,Biochemistry ,chemistry ,biology.protein ,Molecular Medicine ,Heterologous expression ,Sequence Alignment - Abstract
The psychrotrophic Antarctic alga, Chlorella vulgaris NJ-7, grows under an extreme environment of low temperature and high salinity. In an effort to better understand the correlation between fatty acid metabolism and acclimation to Antarctic environment, we analyzed its fatty acid compositions. An extremely high amount of Delta(12) unsaturated fatty acids was identified which prompted us to speculate about the involvement of Delta(12) fatty acid desaturase in the process of acclimation. A full-length cDNA sequence, designated CvFAD2, was isolated from C. vulgaris NJ-7 via reverse transcription polymerase chain reaction (RT-PCR) and RACE methods. Sequence alignment and phylogenetic analysis showed that the gene was homologous to known microsomal Delta(12)-FADs with the conserved histidine motifs. Heterologous expression in yeast was used to confirm the regioselectivity and the function of CvFAD2. Linoleic acid (18:2), normally not present in wild-type yeast cells, was detected in transformants of CvFAD2. The induction of CvFAD2 at an mRNA level under cold stress and high salinity is detected by real-time PCR. The results showed that both temperature and salinity motivated the upregulation of CvFAD2 expression. The accumulation of CvFAD2 increased 2.2-fold at 15A degrees C and 3.9-fold at 4A degrees C compared to the alga at 25A degrees C. Meanwhile a 1.7- and 8.5-fold increase at 3 and 6% NaCl was detected. These data suggest that CvFAD2 is the enzyme responsible for the Delta(12) fatty acids desaturation involved in the adaption to cold and high salinity for Antarctic C. vugaris NJ-7.
- Published
- 2009
25. Cloning, Characterization and Expression Analysis of a Stearoyl-ACP Desaturase Gene from Arachis Hypogaea
- Author
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Qingli Yang, Mingna Chen, Hongsheng Zhang, and Shanlin Yu
- Subjects
Cloning ,Biochemistry ,Amino acid sequence homology ,Sequence analysis ,Expression analysis ,ACP desaturase ,Biology ,Molecular biology ,Gene ,Isozyme ,Arachis hypogaea - Abstract
n/a
- Published
- 2009
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