1. Protein Engineering of Nicotinamide Riboside Kinase Based on a Combinatorial Semirational Design Strategy for Efficient Biocatalytic Synthesis of Nicotinamide Mononucleotides.
- Author
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Mao XA, Zhang P, Gong JS, Marshall GL, Su C, Qin ZQ, Li H, Xu GQ, Xu ZH, and Shi JS
- Subjects
- Phosphotransferases (Phosphate Group Acceptor) genetics, Phosphotransferases (Phosphate Group Acceptor) metabolism, Phosphotransferases (Phosphate Group Acceptor) chemistry, Fermentation, Escherichia coli genetics, Escherichia coli metabolism, Molecular Docking Simulation, Molecular Dynamics Simulation, Biocatalysis, Phosphotransferases (Alcohol Group Acceptor) genetics, Phosphotransferases (Alcohol Group Acceptor) metabolism, Phosphotransferases (Alcohol Group Acceptor) chemistry, Protein Engineering, Nicotinamide Mononucleotide metabolism, Nicotinamide Mononucleotide chemistry
- Abstract
Industrial biosynthesis of β-nicotinamide mononucleotide (β-NMN) lacks a highly active nicotinamide riboside kinase for the phosphorylation process. Cumbersome preprocessing steps and excessive ATP addition contribute to its increased cost. To tackle these challenges, a docking combination simulation (DCS) semirational mutagenesis strategy was designed in this study, combining various modification strategies to obtain a mutant NRK-TRA with 2.9-fold higher enzyme activity. Molecular dynamics simulations and structural analysis demonstrate the enhancement of its structural stability. High-density fermentation was achieved through a 5 L fermentation tank, with a titer reaching 208.3 U/mL, the highest in the current report. An ATP-cycling whole-cell catalytic system was employed and optimized by introducing a polyphosphate kinase 2 (PPK2) recombinant strain, and 15.16 g/L β-NMN was obtained through a series of batch transformation experiments. This study provides a new strategy for the efficient screening of highly active enzyme variants and offers a green and promising biotransformation system for NMN production.
- Published
- 2024
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