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We present MeerKAT Fornax Survey HI observations of NGC 1427A, a blue irregular galaxy with a stellar mass of 2e+9 Msun located near the centre of the Fornax galaxy cluster. Thanks to the excellent resolution (1 to 6 kpc spatially, 1.4 km/s in velocity) and HI column density sensitivity (4e+19/cm^2 to 1e+18/cm^2 depending on resolution), our data deliver new insights on the long-debated interaction of this galaxy with the cluster environment. We confirm the presence of a broad, one-sided, starless HI tail stretching from the outer regions of the stellar body and pointing away from the cluster centre. We find the tail to have 50% more HI (4e+8 Msun) and to be 3 times longer (70 kpc) than in previous observations. In fact, we detect scattered HI clouds out to 300 kpc from the galaxy in the direction of the tail -- possibly the most ancient remnant of the passage of NGC 1427A through the intracluster medium of Fornax. Both the velocity gradient along the HI tail and the peculiar kinematics of HI in the outer region of the stellar body are consistent with the effect of ram pressure given the line-of-sight motion of the galaxy within the cluster. However, several properties cannot be explained solely by ram pressure and suggest an ongoing tidal interaction. This includes: the close match between dense HI and stars within the disturbed stellar body; the abundant kinematically-anomalous HI; and the inversion of the HI velocity gradient near the base of the HI tail. We rule out an interaction with the cluster tidal field, and conclude that NGC 1427A is the result of a high-speed galaxy encounter or of a merger started at least 300 Myr ago, where ram pressure shapes the distribution and kinematics of the HI in the perturbed outer stellar body and in the tidal tails., Comment: Astronomy & Astrophysics, accepted. Data available at the MeerKAT Fornax Survey website, https://sites.google.com/inaf.it/meerkatfornaxsurvey

Context: To study the effects of environment on galaxies we use HI observations of galaxies in and around the cluster A2626. The cluster can effectively be divided in three different environments: the cluster itself, a group environment in the periphery of the cluster (we call it the Swarm) and substructure in the cluster itself. We use these to study the dependence of galaxy properties on environment. Aims: We have explored the relationship between HI deficiency, HI morphology, and star formation deficiency for the galaxies in and around the A2626 galaxy cluster to investigate the environmental effects on those properties. Methods: To quantify asymmetries of the outer HI disc of a galaxy, we used 1) three visual classes based on the outermost reliable HI contour (settled, disturbed, unsettled HI discs), 2) the offset between the HI centre and the optical centre of a galaxy, and 3) the modified asymmetry parameter Amod as defined by Lelli et al. (2014). Results: The HI deficiency of a galaxy is strongly correlated with the projected distance from the centre of A2626. Furthermore, substructure galaxies tend to be more asymmetric than the isolated galaxies in A2626, plausibly because of more efficient tidal interactions within substructures than outside substructures. Moreover, asymmetric, offset, and smaller HI discs are not necessarily the result of the cluster environment, as they are also observed in substructures in A2626 and in the Swarm. This signifies that "pre-processing" of the HI discs of galaxies in groups or substructures plays an important role, together with the "processing" in the cluster environment. Finally, the galaxies in all three environments have slightly lower star-formation rates (SFRs) than the typical SFR for normal galaxies as manifested by their offset from the star formation main sequence, implying effective gas removal mechanisms in all three environments., Comment: 19 pages, 12 figures

We present HI-based B- and R-band Tully-Fisher relations (TFRs) and the Baryonic TFR (BTFR) at z=0.2 using direct HI detections from the Blind Ultra-Deep HI Environmental Survey (BUDHIES). Deep photometry from the Isaac Newton Telescope was used for 36 out of 166 HI sources, matching the quality criteria required for a robust TFR analysis. Two velocity definitions at 20% and 50% of the peak flux were measured from the global HI profiles and adopted as proxies for the circular velocities. We compare our results with an identically constructed z=0 TFR from the Ursa Major (UMa) association of galaxies. To ensure an unbiased comparison of the TFR, all the samples were treated identically regarding sample selection and applied corrections. We provide catalogues and an atlas showcasing the properties of the galaxies. Our analysis is focused on the zero points of the TFR and BTFR with their slopes fixed to the z=0 relation. Our main results are: (1) The BUDHIES galaxies show more asymmetric HI profiles with shallower wings compared to the UMa galaxies, which is likely due to the environment in which they reside, (2) The luminosity-based z=0.2 TFRs are brighter and bluer than the z=0 TFRs, even when cluster galaxies are excluded from the BUDHIES sample, (3) The BTFR shows no evolution in its zero point over the past 2.5 billion years and does not significantly change on the inclusion of cluster galaxies, and (4) proper sample selection and consistent corrections are crucial for an unbiased analysis of the evolution of the TFR., Comment: 24 pages, 14 figures, published in MNRAS

The MeerKAT Fornax Survey maps the distribution and kinematics of atomic neutral hydrogen gas (HI) in the nearby Fornax galaxy cluster using the MeerKAT telescope. The 12 deg^2 survey footprint covers the central region of the cluster out to ~ Rvir and stretches out to ~ 2 Rvir towards south west to include the NGC 1316 galaxy group. The HI column density sensitivity (3 sigma over 25 km/s) ranges from 5e+19/cm^2 at a resolution of ~ 10" (~ 1 kpc at the 20 Mpc distance of Fornax) down to ~ 1e+18/cm^2 at ~ 1' (~ 6 kpc), and slightly below this level at the lowest resolution of ~ 100" (~ 10 kpc). The HI mass sensitivity (3 sigma over 50 km/s) is 6e+5 Msun. The HI velocity resolution is 1.4 km/s. In this paper we describe the survey design and HI data processing, and we present a sample of six galaxies with long, one-sided, star-less HI tails (of which only one was previously known) radially oriented within the cluster and with measurable internal velocity gradients. We argue that the joint properties of the HI tails represent the first unambiguous evidence of ram pressure shaping the distribution of HI in the Fornax cluster. The disturbed optical morphology of all host galaxies supports the idea that the tails consist of HI initially pulled out of the galaxies' stellar body by tidal forces. Ram pressure was then able to further displace the weakly bound HI and give the tails their present direction, length and velocity gradient., Comment: Astronomy & Astrophysics, accepted. Data available at the MeerKAT Fornax Survey website https://sites.google.com/inaf.it/meerkatfornaxsurvey

The 21 cm spectral line emission of atomic neutral hydrogen (HI) is one of the primary wavelengths observed in radio astronomy. However, the signal is intrinsically faint and the HI content of galaxies depends on the cosmic environment, requiring large survey volumes and survey depth to investigate the HI Universe. As the amount of data coming from these surveys continues to increase with technological improvements, so does the need for automatic techniques for identifying and characterising HI sources while considering the tradeoff between completeness and purity. This study aimed to find the optimal pipeline for finding and masking the most sources with the best mask quality and the fewest artefacts in 3D neutral hydrogen cubes. Various existing methods were explored in an attempt to create a pipeline to optimally identify and mask the sources in 3D neutral hydrogen 21 cm spectral line data cubes. Two traditional source-finding methods were tested, SoFiA and MTObjects, as well as a new supervised deep learning approach, in which a 3D convolutional neural network architecture, known as V-Net was used. These three source-finding methods were further improved by adding a classical machine learning classifier as a post-processing step to remove false positive detections. The pipelines were tested on HI data cubes from the Westerbork Synthesis Radio Telescope with additional inserted mock galaxies. SoFiA combined with a random forest classifier provided the best results, with the V-Net-random forest combination a close second. We suspect this is due to the fact that there are many more mock sources in the training set than real sources. There is, therefore, room to improve the quality of the V-Net network with better-labelled data such that it can potentially outperform SoFiA.

We investigate the effect of observational constraints such as signal-to-noise, resolution and column density level on the HI morphological asymmetry ($\mathrm{A}_\mathrm{mod}$) and the effect of noise on the HI global profile ($\mathrm{A}_\mathrm{flux}$) asymmetry indices. Using mock galaxies from the EAGLE simulations we find an optimal combination of the observational constraints that are required for robust measurement of the $\mathrm{A}_\mathrm{mod}$ value of a galaxy: a column density threshold of $5\times10^{19}cm^{-2}$ or lower at a minimal signal-to-noise of 3 and a galaxy resolved with at least 11 beams. We also use mock galaxies to investigate the effect of noise on the $\mathrm{A}_\mathrm{flux}$ values and conclude that a global profile with signal-to-noise ratio greater than 5.5 is required to achieve a robust measurement of asymmetry. We investigate the relation between $\mathrm{A}_\mathrm{mod}$ and $\mathrm{A}_\mathrm{flux}$ indices and find them to be uncorrelated which implies that $\mathrm{A}_\mathrm{flux}$ values cannot be used to predict morphological asymmetries in galaxies., Comment: 19 pages, 12 figures and 2 appendices. Accepted for publication in the Monthly Notices of the Royal Astronomical Soceity

We present the results of a VLA HI imaging survey aimed at understanding why some galaxies develop long extraplanar H$\alpha$ tails, becoming extreme jellyfish galaxies. The observations are centered on five extreme jellyfish galaxies, optically selected from the WINGS and OmegaWINGS surveys and confirmed to have long H$\alpha$ tails through MUSE observations. Each galaxy is located in a different cluster. In the observations there are in total 88 other spiral galaxies within the field of view (40'x40') and observed bandwidth (6500 km s$^{-1}$). We detect 13 of these 88 spirals, plus one uncatalogued spiral, with HI masses ranging from 1 to 7 $\times$ 10${^9}$ M$_{\odot}$. Many of these detections have extended HI disks, two show direct evidence for ram pressure stripping, while others are possibly affected by tidal forces and/or ram-pressure stripping. We stack the 75 non-detected spiral galaxies and find an average HI mass of 1.9 $\times$ 10$^{8}$ M$_{\odot}$, which given their average stellar mass, implies they are very HI deficient. Comparing the extreme jellyfish galaxies to the other disk galaxies, we find that they have a larger stellar mass than almost all disk galaxies and than all HI detected galaxies, they are at smaller projected distance from the cluster center and at higher relative velocity to the cluster mean than all HI detections and most non-detections. We conclude that the high stellar mass allows extreme jellyfish galaxies to fall deeply into the cluster before being stripped and the surrounding ICM pressure gives rise to their spectacular star-forming tails., Comment: 25 pages, 13 figures, accepted to ApJ

We present the blind Westerbork Coma Survey probing the HI content of the Coma galaxy cluster with the Westerbork Synthesis Radio Telescope. The survey covers the inner $\sim$ 1 Mpc around the cluster centre, extending out to 1.5 Mpc towards the south-western NGC 4839 group. The survey probes the atomic gas in the entire Coma volume down to a sensitivity of $\sim$ 10$^{19}$ cm$^{-2}$ and 10$^8$ M$_{\odot}$. Combining automated source finding with source extraction at optical redshifts and visual verification, we obtained 40 HI detections of which 24 are new. Over half of the sample displays perturbed HI morphologies indicative of an ongoing interaction with the cluster environment. With the use of ancillary UV and mid-IR, data we measured their stellar masses and star formation rates and compared the HI properties to a set of field galaxies spanning a similar stellar mass and star formation rate range. We find that $\sim$ 75 % of HI-selected Coma galaxies have simultaneously enhanced star formation rates (by $\sim$ 0.2 dex) and are HI deficient (by $\sim$ 0.5 dex) compared to field galaxies of the same stellar mass. According to our toy model, the simultaneous HI deficiency and enhanced star formation activity can be attributed to either HI stripping of already highly star forming galaxies on a very short timescale, while their H$_2$ content remains largely unaffected, or to HI stripping coupled to a temporary boost of the HI-to-H$_2$ conversion, causing a brief starburst phase triggered by ram pressure before eventually quenching the galaxy., Comment: Accepted for publication in A&A, 27 pages, 21 figures

The morphology-density relation manifests the environmental dependence of the formation and evolution of galaxies as they continuously migrate through the cosmic web to ever denser environments. As gas-rich galaxies traverse the outskirts and inner regions of galaxy clusters they experience sudden and radical changes in their gas content and star formation activity. The goal of this work is to gain an H$\,$I perspective on gas depletion mechanisms acting on galaxies and galaxy groups that are being accreted by a moderately massive galaxy cluster. We aim to study the relative importance and efficiency of processes such as ram-pressure stripping and tidal interactions as well as their dependency on the local and global environment of galaxies in the cluster core and in its surroundings. We have conducted a blind radio continuum and H$\,$I spectral line imaging survey with the MeerKAT radio telescope of a 2$^\circ$ $\times$ 2$^\circ$ area centred on the galaxy cluster Abell 2626. We have used the CARAcal pipeline to reduce the data, SoFiA to detect sources within the H$\,$I data cube, and GIPSY to construct spatially resolved information on the H$\,$I morphologies and kinematics of the H$\,$I detected galaxies. We have detected H$\,$I in 219 galaxies with optical counterparts within the entire surveyed volume. We present the H$\,$I properties of each of the detected galaxies as a data catalogue and as an atlas page for each galaxy, including H$\,$I column-density maps, velocity fields, position-velocity diagrams and global H$\,$I profiles. These data will also be used for case studies of identified ``jellyfish'' galaxies and galaxy population studies by means of morphological classification of the direct H$\,$I detections as well as using the H$\,$I stacking technique., Comment: 20 pages, 11 figures, accepted for publication in Astronomy and Astrophysics

New MMT/Hectospec spectroscopy centered on the galaxy cluster A2626 and covering a ${\sim} 1.8\,\text{deg}^2$ area out to $z \sim 0.46$ more than doubles the number of galaxy redshifts in this region. The spectra confirm four clusters previously identified photometrically. A2625, which was previously thought to be a close neighbor of A2626, is in fact much more distant. The new data show six substructures associated with A2626 and five more associated with A2637. There is also a highly collimated collection of galaxies and galaxy groups between A2626 and A2637 having at least three and probably four substructures. At larger scales, the A2626--A2637 complex is not connected to the Pegasus--Perseus filament., Comment: 18 pages, 13 figures, accepted for publication in the Astronomical Journal

We determined the HI mass function of galaxies in the Ursa Major association of galaxies using a blind VLA-D array survey, consisting of 54 pointings in a cross pattern, covering the centre as well as the outskirts of the Ursa Major volume. The calculated HI mass function has best-fitting Schechter parameters {\theta}^* = 0.19+/-0.11 Mpc^{-3}, log(M^*_{HI}/M_{\odot}) = 9.8+/-0.8 and {\alpha} = -0.92+/-0.16. The high-mass end is determined by a complementary, targeted WSRT survey, the low-mass end is determined by the blind VLA survey. The slope is significantly shallower than the slopes of the HIPASS ({\alpha} = -1.37+/-0.03+/-0.05) and ALFALFA ({\alpha} = -1.33+/-0.02) HI mass functions, which are measured over much larger volumes and cover a wider range of cosmic environments: There is a relative lack of low HI mass galaxies in the Ursa Major region. This difference in the slope strongly hints at an environmental dependence of the HI mass function slope., Comment: 19 pages, 15 figures. Accepted for publication in MNRAS

Galaxy clusters are some of largest structures in the universe. These very dense environments tend to be home to higher numbers of evolved galaxies that what is found in lower density environments. It is well known that dense environments can influence the evolution of galaxies through the removal of the neutral gas (HI) reservoirs which fuel star formation. It is unclear which environment has a stronger effect: the local environment (i.e. the substructure within the cluster), or the cluster itself. Using the new HI data from the Westerbork Coma Survey, we explore the average HI content of galaxies across the cluster comparing galaxies that reside in substructure to those that do not. We apply to the Dressler-Shectman test to our newly compiled redshift catalogue of the Coma cluster to search for substructure. With so few of the Coma galaxies directly detected in HI, we use the HI stacking technique to probe average HI content below what can be directly detected. Using the Dressler-Shectman test, we find 15 substructures within the footprint of the Westerbork Coma Survey. We compare the average HI content for galaxies within substructure to those not in substructure. Using the HI stacking technique, we find that the Coma galaxies (for which are not detected in HI) are more than 10--50 times more HI deficient than expected which supports the scenario of an extremely efficient and rapid quenching mechanism. By studying the galaxies that are not directly detected in HI, we also find Coma to be more HI deficient than previously thought., Comment: 18 pages (+ 21 page appendix), 23 figures, accepted for publication in A&A

We present a catalogue of 261 new infrared selected members of the 3C129 galaxy cluster. The cluster, located at $z \approx$ 0.02, forms part of the Perseus-Pisces filament and is obscured at optical wavelengths due to its location in the zone of avoidance. We identified these galaxies using the $J-$ and $K-$band imaging data provided by the UKIDSS Galactic Plane Survey within an area with a radius of $1.1^{\circ}$ centred on the X-ray emission of the cluster at $\ell, b \approx 160.52^{\circ}, 0.27^{\circ}$. A total of 26 of the identified galaxy members have known redshifts 24 of which are from our 2016 Westerbork HI survey and two are from optical spectroscopy. An analysis of the galaxy density at the core of the 3C129 cluster shows it to be less dense than the Coma and Norma clusters, but comparable to the galaxy density in the core of the Perseus cluster. From an assessment of the spatial and velocity distributions of the 3C129 cluster galaxies that have redshifts, we derived a velocity of $cz = 5227 \pm 171$ km/s and $\sigma = 1097 \pm 252$ km/s for the main cluster, with a substructure in the cluster outskirts at $cz = 6923 \pm 71$ km/s with $\sigma = 422 \pm 100$ km/s. The presence of this substructure is consistent with previous claims based on the X-ray analysis that the cluster is not yet virialised and may have undergone a recent merger., Comment: 33 pages, 16 figures, includes an appendix, accepted for publication in A&A

We present HI observations of the jellyfish galaxy, JO201. This massive galaxy (M$_{\ast} = 3.5 \times 10^{10}$ M$_\odot$) is falling along the line-of-sight towards the centre of a rich cluster (M$_{200} \sim 1.6 \times 10^{15}$ M$_\odot$, $\sigma_{cl} \sim 982$ km/s) at a high velocity $\geq$3363 km/s. Its H$\alpha$ emission shows a $\sim$40 kpc tail confined closely to its stellar disc and a $\sim$100 kpc tail extending further out. We find HI emission coinciding only with the shorter clumpy H$\alpha$ tail. In total, we measure an HI mass of M$_{\rm HI} = 1.65 \times 10^{9}$ M$_\odot$, which is about 60% lower than expected based on its stellar mass and stellar surface density. We compared JO201 to another jellyfish in the GASP sample, JO206 (of similar mass but residing in a 10$\times$ less massive cluster), and find that they are similarly HI-deficient. Of the total HI mass in JO201, about 30% lies outside the galaxy disc in projection. This HI fraction is probably a lower limit since most of the HI is redshifted relative to the stellar disc and could be outside the disc. The global star formation rate (SFR) analysis of JO201 suggests that its observed SFR would be expected if it had 10$\times$ its current HI mass. The disc is the main contributor of the high star formation efficiency at a given HI gas density for both galaxies, but their tails also show higher star formation efficiencies compared to the outer regions of field galaxies. Generally, we find that JO201 and JO206 are similar based on their HI content, stellar mass and star formation rate. This finding is unexpected considering their different environments. A toy model comparing the ram pressure of the ICM versus the restoring forces of these galaxies suggests that the ram pressure strength exerted on them could be comparable if we consider their 3D orbital velocities and radial distances relative to the clusters., Comment: 9 pages, 8 figures, Accepted for publication in A&A

We present VLA HI observations of JO206, a prototypical ram-pressure stripped galaxy in the GASP sample. This massive galaxy (M$_{\ast} =$ 8.5 $\times$ 10$^{10}$ M$_{\odot}$) is located at a redshift of $z =$ 0.0513, near the centre of the low-mass galaxy cluster, IIZw108 ($\sigma \sim575$ km/s). JO206 is characterised by a long tail ($\geq$90 kpc) of ionised gas stripped away by ram-pressure. We find a similarly long HI tail in the same direction as the ionised gas tail and measure a total HI mass of $3.2 \times 10^{9}$ M$_{\odot}$. This is about half the expected HI mass given the stellar mass and surface density of JO206. A total of $1.8 \times 10^{9}$ M$_{\odot}$ (60%) of the detected HI is in the gas stripped tail. An analysis of the star formation rate shows that the galaxy is forming more stars compared to galaxies with the same stellar and HI mass. On average we find a HI gas depletion time of $\sim$0.5 Gyr which is about four times shorter than that of "normal" spiral galaxies. We performed a spatially resolved analysis of the relation between star formation rate density and gas density in the disc and tail of the galaxy at the resolution of our HI data. The star formation efficiency of the disc is about 10 times higher than that of the tail at fixed HI surface densities. Both the inner and outer parts of JO206 show an enhanced star formation compared to regions of similar HI surface density in field galaxies. The enhanced star formation is due to ram-pressure stripping during the galaxy's first infall into the cluster., Comment: 13 pages, 12 figures, Accepted for publication in MNRAS

We present the science case and observations plan of the MeerKAT Fornax Survey, an HI and radio continuum survey of the Fornax galaxy cluster to be carried out with the SKA precursor MeerKAT. Fornax is the second most massive cluster within 20 Mpc and the largest nearby cluster in the southern hemisphere. Its low X-ray luminosity makes it representative of the environment where most galaxies live and where substantial galaxy evolution takes place. Fornax's ongoing growth makes it an excellent laboratory for studying the assembly of clusters, the physics of gas accretion and stripping in galaxies falling in the cluster, and the connection between these processes and the neutral medium in the cosmic web. We will observe a region of 12 deg$^2$ reaching a projected distance of 1.5 Mpc from the cluster centre. This will cover a wide range of environment density out to the outskirts of the cluster, where gas-rich in-falling groups are found. We will: study the HI morphology of resolved galaxies down to a column density of a few times 1e+19 cm$^{-2}$ at a resolution of 1 kpc; measure the slope of the HI mass function down to M(HI) 5e+5 M(sun); and attempt to detect HI in the cosmic web reaching a column density of 1e+18 cm$^{-2}$ at a resolution of 10 kpc., Comment: Proceedings of Science, "MeerKAT Science: On the Pathway to the SKA", Stellenbosch, 25-27 May 2016

Our current understanding of galaxy evolution still has many uncertainties associated with the details of accretion, processing, and removal of gas across cosmic time. The next generation of radio telescopes will image the neutral hydrogen (HI) in galaxies over large volumes at high redshifts, which will provide key insights into these processes. We are conducting the COSMOS HI Large Extragalactic Survey (CHILES) with the Karl G. Jansky Very Large Array, which is the first survey to simultaneously observe HI from z=0 to z~0.5. Here, we report the highest redshift HI 21-cm detection in emission to date of the luminous infrared galaxy (LIRG) COSMOS J100054.83+023126.2 at z=0.376 with the first 178 hours of CHILES data. The total HI mass is $(2.9\pm1.0)\times10^{10}~M_\odot$, and the spatial distribution is asymmetric and extends beyond the galaxy. While optically the galaxy looks undisturbed, the HI distribution suggests an interaction with candidate a candidate companion. In addition, we present follow-up Large Millimeter Telescope CO observations that show it is rich in molecular hydrogen, with a range of possible masses of $(1.8-9.9)\times10^{10}~M_\odot$. This is the first study of the HI and CO in emission for a single galaxy beyond z~0.2., Comment: 7 pages, 5 figures, accepted for publication in ApJL

We present results of a blind 21cm HI-line imaging survey of a galaxy overdensity located behind the Milky Way at $\ell,b$ $\approx$ 160 deg, 0.5 deg. The overdensity corresponds to a Zone-of-Avoidance crossing of the Perseus-Pisces Supercluster filament. Although it is known that this filament contains an X-ray galaxy cluster (3C129) hosting two strong radio galaxies, little is known about galaxies associated with this potentially rich cluster because of the high Galactic dust extinction. We mapped a sky area of $\sim$9.6 sq.deg using the Westerbork Synthesis Radio Telescope in a hexagonal mosaic of 35 pointings observed for 12 hours each, in the radial velocity range $cz = 2400 - 16600$ km/s. The survey has a sensitivity of 0.36 mJy/beam rms at a velocity resolution of 16.5 km/s. We detected 211 galaxies, 62% of which have a near-infrared counterpart in the UKIDSS Galactic Plane Survey. We present a catalogue of the HI properties and an HI atlas containing total intensity maps, position-velocity diagrams, global HI profiles and UKIDSS counterpart images. For the resolved galaxies we also present HI velocity fields and radial HI surface density profiles. A brief analysis of the structures outlined by these galaxies finds that 87 of them lie at the distance of the Perseus-Pisces Supercluster ($cz \sim 4000 - 8000$ km/s) and seem to form part of the 3C129 cluster. Further 72 detections trace an overdensity at a velocity of $cz \approx$ 10000 km/s and seem to coincide with a structure predicted from mass density reconstructions in the first 2MASS Redshift Survey., Comment: 28 pages, 18 figures, 6 Tables, accepted for publication in MNRAS

Upcoming HI surveys will deliver large datasets, and automated processing using the full 3-D information (two positional dimensions and one spectral dimension) to find and characterize HI objects is imperative. In this context, visualization is an essential tool for enabling qualitative and quantitative human control on an automated source finding and analysis pipeline. We discuss how Visual Analytics, the combination of automated data processing and human reasoning, creativity and intuition, supported by interactive visualization, enables flexible and fast interaction with the 3-D data, helping the astronomer to deal with the analysis of complex sources. 3-D visualization, coupled to modeling, provides additional capabilities helping the discovery and analysis of subtle structures in the 3-D domain. The requirements for a fully interactive visualization tool are: coupled 1-D/2-D/3-D visualization, quantitative and comparative capabilities, combined with supervised semi-automated analysis. Moreover, the source code must have the following characteristics for enabling collaborative work: open, modular, well documented, and well maintained. We review four state of-the-art, 3-D visualization packages assessing their capabilities and feasibility for use in the case of 3-D astronomical data., Comment: 19 pages, 6 figures, 2 tabular. Accepted for publication in Astronomy and Computing

One of the key science drivers for the development of the SKA is to observe the neutral hydrogen, HI, in galaxies as a means to probe galaxy evolution across a range of environments over cosmic time. Over the past decade, much progress has been made in theoretical simulations and observations of HI in galaxies. However, recent HI surveys on both single dish radio telescopes and interferometers, while providing detailed information on global HI properties, the dark matter distribution in galaxies, as well as insight into the relationship between star formation and the interstellar medium, have been limited to the local universe. Ongoing and upcoming HI surveys on SKA pathfinder instruments will extend these measurements beyond the local universe to intermediate redshifts with long observing programmes. We present here an overview of the HI science which will be possible with the increased capabilities of the SKA and which will build upon the expected increase in knowledge of HI in and around galaxies obtained with the SKA pathfinder surveys. With the SKA1 the greatest improvement over our current measurements is the capability to image galaxies at reasonable linear resolution and good column density sensitivity to much higher redshifts (0.2 < z < 1.7). So one will not only be able to increase the number of detections to study the evolution of the HI mass function, but also have the sensitivity and resolution to study inflows and outflows to and from galaxies and the kinematics of the gas within and around galaxies as a function of environment and cosmic time out to previously unexplored depths. The increased sensitivity of SKA2 will allow us to image Milky Way-size galaxies out to redshifts of z=1 and will provide the data required for a comprehensive picture of the HI content of galaxies back to z~2 when the cosmic star formation rate density was at its peak., Comment: 25 pages, 5 figures, 3 tables. Contribution to the conference 'Advancing Astrophysics with the Square Kilometre Array', June 8-13, 2014, Giardini Naxos, Italy

We describe and discuss the selection procedure and statistical properties of the galaxy sample used by the Calar Alto Legacy Integral Field Area Survey (CALIFA), a public legacy survey of 600 galaxies using integral field spectroscopy. The CALIFA "mother sample" was selected from the Sloan Digital Sky Survey (SDSS) DR7 photometric catalogue to include all galaxies with an r-band isophotal major axis between 45" and 79.2" and with a redshift 0.005 < z < 0.03. The mother sample contains 939 objects, 600 of which will be observed in the course of the CALIFA survey. The selection of targets for observations is based solely on visibility and thus keeps the statistical properties of the mother sample. By comparison with a large set of SDSS galaxies, we find that the CALIFA sample is representative of galaxies over a luminosity range of -19 > Mr > -23.1 and over a stellar mass range between 10^9.7 and 10^11.4Msun. In particular, within these ranges, the diameter selection does not lead to any significant bias against - or in favour of - intrinsically large or small galaxies. Only below luminosities of Mr = -19 (or stellar masses < 10^9.7Msun) is there a prevalence of galaxies with larger isophotal sizes, especially of nearly edge-on late-type galaxies, but such galaxies form < 10% of the full sample. We estimate volume-corrected distribution functions in luminosities and sizes and show that these are statistically fully compatible with estimates from the full SDSS when accounting for large-scale structure. We also present a number of value-added quantities determined for the galaxies in the CALIFA sample. We explore different ways of characterizing the environments of CALIFA galaxies, finding that the sample covers environmental conditions from the field to genuine clusters. We finally consider the expected incidence of active galactic nuclei among CALIFA galaxies., Comment: 20 pages, 18 figures, A&A in press

High-resolution 21-cm HI deep fields provide spatially and kinematically resolved neutral gas maps at different redshifts, which are key to understanding galaxy evolution across cosmic time and testing predictions of cosmological simulations. Here we present results from a pilot for the COSMOS HI Large Extragalactic Survey (CHILES) done with the Karl G. Jansky Very Large Array (VLA). We take advantage of the newly expanded capabilities of the telescope to probe the redshift interval 0

We present first results from the Blind Ultra Deep HI Environmental Survey (BUDHIES) of the Westerbork Synthesis Radio Telescope (WSRT). Our survey is the first direct imaging study of neutral atomic hydrogen gas in galaxies at a redshift where evolutionary processes begin to show. In this letter we investigate star formation, HI-content, and galaxy morphology, as a function of environment in Abell 2192 (at z=0.1876). Using a 3-dimensional visualization technique, we find that Abell 2192 is a cluster in the process of forming, with significant substructure in it. We distinguish 4 structures that are separated in redshift and/or space. The richest structure is the baby cluster itself, with a core of elliptical galaxies that coincides with (weak) X-ray emission, almost no HI-detections, and suppressed star formation. Surrounding the cluster, we find a compact group where galaxies pre-process before falling into the cluster, and a scattered population of "field-like" galaxies showing more star formation and HI-detections. This cluster proves to be an excellent laboratory to understand the fate of the HI gas in the framework of galaxy evolution. We clearly see that the HI gas and the star formation correlate with morphology and environment at z=0.2. In particular, the fraction of HI-detections is significantly affected by the environment. The effect starts to kick in in low mass groups that pre-process the galaxies before they enter the cluster. Our results suggest that by the time the group galaxies fall into the cluster, they are already devoid of HI., Comment: 6 pages, 4 figures. Accepted for publication in ApJL. An animated version of Figure 2 is available at: http://www.nottingham.ac.uk/~ppxyj/Jaffe_ApJL_2012_Fig2_movie.mpeg. (v2. minor corrections/typos added)