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Contamination of fish with metals is a worldwide consumer safety concern. In this study, three metals such as arsenic (As), chromium (Cr), and lead (Pb) were measured in two commonly consumed fish species Oreochromis niloticus (Tilapia) and Pangasianodon hypophthalmus (Pangasius) that are commercially farmed. The concentration of the metals studied was found within the permissible limits. The concentrations of As, Cr, and Pb in tilapia fluctuated, ranging from not detected (ND) to 0.114 mg/kg, ND to 0.009 mg/kg, and ND to 0.085 mg/kg, respectively. For Pangasius, the concentrations were in the range of 0.014 to 0.118 mg/kg for As, ND to 0.02 mg/kg for Cr, and ND to 0.047 mg/kg for Pb. Hierarchical clustering revealed that As was possibly taken up by leachate and groundwater, while Cr and Pb were from contaminated feed. The results of the calculations for estimated daily intake, target hazard quotient, hazard index, and carcinogenic risk made it clear that consumption of the fish studied does not have a significant adverse effect on consumer health. In conclusion, the contamination levels of farmed tilapia and Pangasius sold in the study area are within acceptable limits, but regular monitoring is required to ensure safe production., (© 2023. The Author(s), under exclusive licence to Springer Nature Switzerland AG.)