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Trophic polymorphism and temporal reproductive isolation are the drivers of sympatric differentiation in many fish taxa. We present a new case of ecologically based diversification of Arctic charr in a Transbaikalian mountain lake inhabited by reproductively isolated dwarf and normal forms. These forms differ in size, diets and morphology and breed, respectively, in April–May and in September–October representing a rare example of sympatric spring- and autumn-spawning charr pair. Microsatellite analysis reveals clear-cut genetic differences and low-level hybridization between them. Dwarf form charr are planktivorous and manifest uniform slow growth. Normal form charr, though genetically homogeneous, are highly heterogeneous in size-at-age. They are subdivided into omnivorous small-size and piscivorous large-size groups, which can be considered as incipient forms at an early divergence stage. As evidenced by back-calculated growth data, their size-at-age heterogeneity results from highly variable individual growth patterns, which include different combinations of slow and fast growth periods presumably associated with spawning and non-spawning years. Growth acceleration in late ontogeny may result in the transformation of some normal charr from the smaller into the larger group during their lifetime. [ABSTRACT FROM AUTHOR]

Temperature variation is affecting fish biodiversity worldwide, causing changes in geographic distribution, phenotypic structure, and even species extinction. Incubation is a critical stage for stenothermic species, which are vulnerable to large temperature fluctuations, and its effects on the phenotype at later developmental stages are understudied, despite the fact that the phenotype being essential for organism ecology and evolution. In this study, we tested the effects of heat shocks during the embryonic period on the phenotype of Arctic charr (Salvelinus alpinus). We repeatedly quantified multiple phenotypic traits, including morphology, development, and behavior, over a period of 4 months, from hatching to juvenile stage in individuals that had experienced heat shocks (+ 5°C on 24 h, seven times) during their embryonic stage and those that had not. We found that heat shocks led to smaller body size at hatching and a lower sociability. Interestingly, these effects weakened throughout the development of individuals and even reversed in the case of body size. We also found an accelerated growth rate and a higher body condition in the presence of heat shocks. Our study provides evidence that heat shocks experienced during incubation can have long‐lasting effects on an individual's phenotype. This highlights the importance of the incubation phase for the development of ectothermic organisms and suggests that temperature fluctuations may have significant ecological and evolutionary implications for Arctic charr. Given the predicted increase in extreme events and the unpredictability of temperature fluctuations, it is critical to further investigate their effects on development by examining fluctuations that vary in frequency and intensity. [ABSTRACT FROM AUTHOR]

Lakes in the High Arctic are characterized by their low water temperature, long-term ice cover, low levels of nutrients, and low biodiversity. These conditions mean that minor climatic changes may be of great importance to Arctic freshwater organisms, including fish, by influencing vital life history parameters such as individual growth rates. In this study, Arctic charr sampled from two Svalbard lakes (78–79° N) over the period 1960–2008 provided back-calculated length-at-age information extending over six decades, covering both warm and cold spells. The estimated annual growth in young-of-the-year (YOY) Arctic charr correlated positively with an increasing air temperature in summer. This increase is likely due to the higher water temperature during the ice-free period, and also to some extent, due to the winter air temperature; this is probably due to thinner ice being formed in mild winters and the subsequent earlier ice break-up. However, years with higher snow accumulation correlated with slower growth rates, which may be due to delayed ice break-up and thus a shorter summer growing season. More than 30% of the growth in YOY charr could be explained specifically by air temperature and snow accumulation in the two Arctic charr populations. This indicated that juvenile Svalbard Arctic charr may experience increased growth rates in a future warmer climate, although future increases in precipitation may contradict the positive effects of higher temperatures to some extent. In the longer term, a warmer climate may lead to the complete loss of many glaciers in western Svalbard; therefore, rivers may dry out, thus hindering migration between salt water and fresh water for migratory fish. In the worst-case scenario, the highly valuable and attractive anadromous Arctic charr populations could eventually disappear from the Svalbard lake systems. [ABSTRACT FROM AUTHOR]

Iteroparity occurs when organisms reproduce more than once, and is seen as a bet-hedging reproductive strategy. Despite a wealth of research on iteroparous Atlantic salmon, steelhead, brown trout, and Arctic charr, the determinants of reproductive investment, the intra- and interspecific differences in the degree of iteroparity, the drivers of repeat spawning, and the contribution of repeat spawners to populations and sustainability remain unclear. In particular, the knowledge base is stronger for Atlantic salmon and brown trout, but relatively weak for Arctic charr and steelhead. While juveniles, maiden spawners and repeat spawners are facing similar challenges, many threats specific to the kelt stage are emerging (e.g., downstream migration passed barriers after spawning). Recent work has quantified the benefits of iteroparity for population resilience, and the potential for iteroparity to increase when anthropogenic stressors are mitigated. This is the first literature review paper synthetizing the growing knowledge base that exists on various aspects of the ecology and biology of repeat spawners in freshwater and at sea, the threats they face, the proximate and ultimate mechanisms underlying iteroparity in salmonids, the importance of iteroparity for population-level processes, as well as highlighting pressing areas of research. Collectively, this work offers a valuable resource to fisheries scientists and managers by shedding light on an important life-history stage that warrants more attention to mitigate these threats and restore healthy wild salmonid populations. [ABSTRACT FROM AUTHOR]

Background: Substantial variation in male fertility is regularly observed in farmed Arctic charr. However, detailed investigations of its fluctuation during a reproductive season and across years are lacking. Furthermore, information about the effect of underlying genetic factors influencing sperm quality is scarce. The current study focused on seasonal and age-related factors that may affect sperm quality characteristics in males reared in natural and delayed photoperiods. Animals were sampled three times for two consecutive years, and sperm quality parameters were recorded using a computer-assisted sperm analysis (CASA) system. Thereafter, high-throughput sequencing technologies were applied, aiming to identify genomic regions related to the variation of sperm quality throughout the reproductive season. Results: An across-season variation in the recorded sperm quality parameters was evident. Overall, 29% and 42% of males from the natural and delayed spawning groups had a highly variable total progressive motility. Males at four years of age showed significantly higher sperm motility and velocities during the early October and November recordings compared to the following year when the same animals were five years of age. On the other hand, the opposite was observed regarding sperm concentration during the last sampling. A genome-wide FST scan detected SNP differentiation among males with high and low variability in total progressive motility (PM) on eight chromosomes (FST > 0.17), Genome wide windows with the highest FST contained SNPs in proximity (within 250 kb up- and downstream distance) to 16 genes with sperm quality biological functions in mammalian species. Conclusion: Our findings provide a detailed view of seasonal, age-related, and genetic effects on sperm quality and can be used to guide decisions on broodstock selection and hatchery management. [ABSTRACT FROM AUTHOR]

Arctic charr (Salvelinus alpinus) is a niche‐market high‐value species for Nordic aquaculture. Similar to other salmonids, both anadromous and landlocked populations are encountered. Whole‐genome re‐sequencing (22X coverage) was performed on two farmed populations of anadromous (Sigerfjord; n = 24) and landlocked (Arctic Superior; n = 24) origin from Norway and Sweden respectively. More than 5 million SNPs were used to study their genetic diversity and to scan for selection signatures. The two populations were clearly distinguished through principal component analysis, with the mean fixation index being ~0.12. Furthermore, the levels of genomic inbreeding estimated from runs of homozygosity were 6.23% and 8.66% for the Norwegian and the Swedish population respectively. Biological processes that could be linked to selection pressure associated primarily with the anadromous background and/or secondarily with domestication were suggested. Overall, our study provided insights regarding the genetic composition of two main strains of farmed Arctic charr from Scandinavia. At the same time, ample genomic resources were produced in the magnitude of millions of SNPs that could assist the transition of Nordic Arctic charr farming in the genomics era. [ABSTRACT FROM AUTHOR]

It is considered that allopatric speciation proceeds slower than sympatric speciation and rarely results in rapid differentiation of populations. In particular, high intraspecific divergence in fishes from recently glaciated freshwater systems is typically observed within flocks of sympatric forms, not between geographically isolated populations. We present an alternative case of fast and profound eco-morphological and genetic divergence between two allopatric Transbaikalian populations of Arctic charr. In one, charr are predominantly piscivorous with sparse short gill rakers; in the other, predominantly planktivorous with dense long gill rakers. Gill raker number differs with no overlap and there is considerable differentiation in other meristic and morphometric characters. Both populations manifest exceptionally low variability at microsatellite loci coupled with substantial interpopulational differences in allele composition obviously resulting from genetic drift. Still, they form a monophyletic clade in microsatellite phylogenetic tree of Transbaikalian charr and share the same mtDNA control region haplotype, which evidences their common origin. According to genetic dating, the divergence of the populations occurred about 14 thousand years ago. Our study shows that high differentiation between local charr populations can emerge in allopatry over a short time if speciation is driven by trophic specialization and is facilitated by small population sizes. [ABSTRACT FROM AUTHOR]

Host density, host body size and ambient temperature have all been positively associated with increases in parasite infection. However, the relative importance of these factors in shaping long‐term parasite population dynamics in wild host populations is unknown due to the absence of long‐term studies. Here, we examine long‐term drivers of gill lice (Copepoda) infections in Arctic charr (Salmonidae) over 32 years. We predicted that host density and body size and water temperature would all positively affect parasite population size and population growth rate. Our results show that fish size was the main driver of gill lice infections in Arctic charr. In addition, Arctic charr became infected at smaller sizes and with more parasites in years of higher brown trout population size. Negative intraguild interactions between brown trout and Arctic charr appear to drive smaller Arctic charr to seek refuge in deeper areas of the lake, thus increasing infection risk. There was no effect of host density on the force of infection, and the relationship between Arctic charr density and parasite mean abundance was negative, possibly due to an encounter‐dilution effect. The population densities of host and parasite fluctuated independently of one another. Water temperature had negligible effects on the temporal dynamics of the gill lice population. Understanding long‐term drivers of parasite population dynamics is key for research and management. In fish farms, artificially high densities of hosts lead to vast increases in the transmission of parasitic copepods. However, in wild fish populations fluctuating at natural densities, the surface area available for copepodid attachment might be more important than the density of available hosts. [ABSTRACT FROM AUTHOR]

The ecology of salmonids is tightly linked to their spawning habitats, but the link between spawning site selection and phenology is poorly understood. To address this, we studied the Arctic charr (Salvelinus alpinus) from the postglacial lake Thingvallavatn (Iceland) through a multidisciplinary approach involving aerial surveys, behavioural observations, temperature monitoring and embryo rearing experiments. Aerial footage revealed that most nests (i.e. redds) were established in shallow parts of the spawning area, and we reported through direct observations trends for stronger male–male competition and for more frequent courtship behaviours in shallow than in deep redds. While water depth did not correlate with temperature at the time of spawning, the temperatures recorded at the shallow redds were consistently lower in the two months following the video recordings, likely because of the proximity of glacial outlets. Laboratory experiments demonstrated that the temperature regimes in shallow waters can delay hatching with about a month, likely impacting the phenology of the offspring. The viability of the Arctic charr in Thingvallavatn may thus depend on physical features like groundwater springs and upwelling water flows acting as "temperature shelters". [ABSTRACT FROM AUTHOR]

Simple Summary: Fish is an important source of nutritious fatty acids, which are necessary for the prevention of cardiovascular and neurological diseases. Many fish species are a major component of the human diet, especially for indigenous peoples from Siberia, Russia, but information about their fatty acid profiles is scarce. We studied the fatty acid content of four salmonid fish (Arctic cisco, least cisco, muksun, and Arctic charr) inhabiting water bodies of the Gydan Peninsula, Kara Sea basin. We found a high content of essential polyunsaturated fatty acids in local salmonid fishes. Arctic charr was the fish species with the highest concentration of fatty acids in the flesh. The results of our multivariate analysis may be useful for anglers, stakeholders, and local consumers. We assayed fatty acids in the flesh of Arctic cisco Coregonus autumnalis (adult and juvenile), least cisco Coregonus sardinella, muksun Coregonus muksun, and Arctic charr Salvelinus alpinus inhabiting water bodies of the Gydan Peninsula, Siberia, Russia. The highest concentrations of total and polyunsaturated fatty acids (PUFAs) were found in Arctic charr (27.8 and 9.5 mg g−1) and adult Arctic cisco (20.2 and 7.6 mg g−1), while the lowest concentrations occurred in juvenile Arctic cisco (7.5 and 3.6 mg g−1). Multivariate analyses divided all studied fish into five distinct groups with the highest similarity between least cisco and muksun and the highest dissimilarity between juvenile Arctic cisco and Arctic charr. Coregonid fish from the study area had a higher content of docosahexaenoic and eicosapentaenoic acids than their conspecifics from subarctic and temperate habitats. The flesh of the studied fish is a source of a healthy diet for humans. Taking into account that all the studied fish are components of the traditional diet of indigenous peoples in northwestern Siberia, our data may be useful not only for local consumers and anglers but also for stakeholders focused on food policy and food security in the area. [ABSTRACT FROM AUTHOR]

Arctic charr Salvelinus alpinus (L.) complex has two or more sympatric forms in many lakes representing a subject for discussions on the mechanisms of their origin and taxonomic status. To determine the number of sympatric forms in three large lakes of the Norilo-Pyasinskaya water system (Taimyr) and their reproductive and phylogenetic relationships, 17 microsatellite loci, sequences of the mtDNA control region, and several morphological characteristics were analyzed. Our data indicate that eight reproductively isolated forms inhabit lakes Lama and Kapchuk, and at least three forms are distributed in Lake Sobach'e. The origin of the forms is associated with the secondary contact and hybridization of the European and Siberian phylogenetic lineages. The same names of the forms from different lakes of Taimyr and Chukotka, for example, Boganida charr and Dryagin's charr, may reflect their certain morphological similarity, but rarely close relationships. Our data indirectly indicate that introgressive hybridization and biogeographical changes of the lakes within the region in the last glacial and post-glacial periods played a significant role in the formation of a high Arctic charr biodiversity. The problem associated with systematics, taxonomy, and conservation of the forms in Taimyr lakes is complex and should be solved gradually. [ABSTRACT FROM AUTHOR]

Trait expression of natural populations often jointly depends on prevailing abiotic environmental conditions and predation risk. Copepods, for example, can vary their expression of compounds that confer protection against ultraviolet radiation (UVR), such as astaxanthin and mycosporine‐like amino acids (MAAs), in relation to predation risk. Despite ample evidence that copepods accumulate less astaxanthin in the presence of predators, little is known about how the community composition of planktivorous fish can affect the overall expression of photoprotective compounds. Here, we investigate how the (co‐)occurrence of Arctic charr (Salvelinus alpinus) and threespine stickleback (Gasterosteus aculeatus) affects the photoprotective phenotype of the copepod Leptodiaptomus minutus in lake ecosystems in southern Greenland. We found that average astaxanthin and MAA contents were lowest in lakes with stickleback, but we found no evidence that these photoprotective compounds were affected by the presence of charr. Furthermore, variance in astaxanthin among individual copepods was greatest in the presence of stickleback and the astaxanthin content of copepods was negatively correlated with increasing stickleback density. Overall, we show that the presence and density of stickleback jointly affect the content of photoprotective compounds by copepods, illustrating how the community composition of predators in an ecosystem can determine the expression of prey traits that are also influenced by abiotic stressors. [ABSTRACT FROM AUTHOR]

Females in mutually ornamented species are often less conspicuously ornamented than their male conspecifics. It has been hypothesized that offspring quality may decrease if females invest more resources into ornaments at the expense of resources in eggs. An experiment was carried out to test whether natural variation in carotenoid in the eggs from a wild population of Arctic charr (Salvelinus alpinus) was associated with survival and growth of their offspring until hatching. Wild Arctic charr were caught at a spawning ground during the spawning period. Eggs from two different females, one female with yellowish carotenoid‐rich eggs and one with paler eggs, were fertilized by sperm from the same male. This was repeated until gametes were collected from 42 females and 21 males, giving a total of 21 groups. After fertilization, the zygotes from each of the two females were reared in four replicated groups. These 168 groups were reared separately until hatching when the surviving larvae were counted and their body length measured. For the two response variables survival and body length at hatching, no effect was demonstrated of any of the predictors (i) amount of carotenoid in the unfertilized eggs, (ii) the mothers' body condition, or (iii) ornament intensity of their red carotenoid‐based abdominal ornament. Thus, this study gives no support for the hypothesis that females investing less carotenoid into their eggs suffer from decreased offspring quality until hatching. This lack of association between female ornament intensity and their fitness is not as expected if female ornaments evolved due to direct sexual selection from males on the more ornamented females ("direct selection hypothesis"). [ABSTRACT FROM AUTHOR]

Routine implementation of genomic information for guiding selection decisions is not yet common in the majority of aquaculture species. Reduced representation sequencing approaches offer a cost‐effective solution for obtaining genome‐wide information in species with a limited availability of genomic resources. In the current study, we implemented double‐digest restriction site‐associated DNA sequencing (ddRAD‐seq) on an Arctic charr strain with the longest known history of selection (approximately 40 years) aiming to improve selection decisions. In total, 1730 animals reared at four different farms in Sweden and spanning from year classes 2013–2017 were genotyped using ddRAD‐seq. Approximately 5000 single nucleotide polymorphisms (SNPs) were identified, genetic diversity‐related metrics were estimated, and genome‐wide association studies (GWAS) for body length at different time points and age of sexual maturation were conducted. Low genetic differentiation amongst animals from the different farms was observed based on both the results from pairwise Fst values and principal component analysis (PCA). The existence of associations was investigated between the mean genome‐wide heterozygosity of each full‐sib family (year class 2017) and the corresponding inbreeding coefficient or survival to the eyed stage. A moderate correlation (−0.33) was estimated between the mean observed heterozygosity of each full‐sib family and the corresponding inbreeding coefficient, while no linear association was obtained with the survival to the eyed stage. GWAS did not detect loci with major effect for any of the studied traits. However, genomic regions explaining more than 1% of the additive genetic variance for either studied traits were suggested across 14 different chromosomes. Overall, key insights valuable for future selection decisions of Arctic charr have been obtained, suggesting ddRAD as an attractive genotyping platform for obtaining genome‐wide information in a cost‐effective manner. [ABSTRACT FROM AUTHOR]

From video recordings of spawning events, we quantified protective and cannibalistic behavior of Arctic charr occurring immediately after spawning. The number of fish cannibalizing on stray eggs was examined regarding (a) whether more than one male shed milt during the spawning event, that is, whether sperm competition occurred, (b) whether the sperm competition included few or many males, that is, the intensity of sperm competition, and (c) the density of fish at the spawning site. Response behavior toward egg cannibalism was also examined among females and dominant males in order to determine any parental investment toward protecting the eggs after spawning. Cannibalistic behavior was seen in almost 50% of the spawnings, and the multiple spawning events showed the highest numbers of fish cannibalizing on eggs. Both the number of males releasing milt and the number of fish approaching the spawning site were positively correlated with egg cannibalism. Sperm competition was, however, not a prerequisite for egg cannibalism. Although we also observed partial filial cannibalism, protective behavior of eggs was seen both among dominant males and females, suggesting that charr actually conduct parental care. [ABSTRACT FROM AUTHOR]

The Arctic charr breeding programme has been a main driving force for developing the aquaculture industry in Sweden. Selection has been performed for almost 40 years using animals from a closed breeding nucleus. The aim of the current study was to evaluate the potential of further improving growth‐related traits taking into account the existence of genotype‐by‐environment interaction. Furthermore, we investigated the magnitude of the genetic component associated with survival to the eyed stage and potential associations with inbreeding coefficients. A preliminary heritability estimate of 0.23 (SE 0.20) was obtained for survival to the eyed stage using records spanning from 2000 to 2017 (n = 230). Moreover, moderate‐to‐high heritability estimates (0.27–0.49) were obtained for growth‐related traits (body weight and length), using animals from the latest generation of selection (year class 2017). Those animals (n = 2,776), originating from 55 full‐sib families, were split into two groups and reared in separate land‐based facilities of commercial fish farms in Sweden. The growth‐related traits were recorded twice in both sites when animals were of >1 and >2 years of age. Existence of sexual growth dimorphism was indicated with the males having on average 6%–8% higher total length and 22%–34% higher body weight. Furthermore, high genetic correlations regarding growth traits were obtained amongst animals reared at the two different sites (0.82–0.95). In addition, we assessed the accuracy of best linear unbiased prediction (BLUP)‐derived estimated breeding values (EBVs) when phenotypes from each rearing site were subsequently masked and used as a validation set. A mean prediction accuracy of 0.60 (length) and 0.64 (weight) were derived for both rearing sites. Overall, our results suggest that further growth improvements should be possible in the subsequent generations of selection. Finally, even though indications for the existence of an underlying genetic component(s) involved in survival to the eyed stage were obtained additional data will be required for elucidating its magnitude. [ABSTRACT FROM AUTHOR]

Currently, no information is available on the effect of progressively decreasing temperatures on the sensory quality of Arctic charr. The objective of this study was to investigate if and how different and progressively changing rearing temperatures affect the sensory quality of cooked and raw fillets of Arctic charr. The effects of rearing temperature on the sensory quality of Arctic charr (weight range 622–888 g) were investigated. Rearing temperature was changed during the experimental period as the fish were reared at constant or decreased temperature during October to April and subsequently reared at two constant temperatures from April to August establishing six different rearing temperature combinations. Significant differences were seen in all four main sensory attributes groups, that is odour, appearance, flavour and texture. Freshness characteristics such as sweet odour and flavour, and metallic odour and flavour increased with decreasing rearing temperature, whereas musty odour and flavour decreased. Rearing temperature had a clear effect on the colour of the fillets. Lower rearing temperature increased colour intensity substantially. Softness, juiciness and tenderness increased with decreased rearing temperature. A trend was seen towards more effect from final rearing temperature than initial temperature on the sensory attributes studied. Spoilage characteristics, that is, sour and rancid odour and flavour, and off‐odour and flavour were either very weak or not noticeable in all sample groups. [ABSTRACT FROM AUTHOR]

Many life-history events in aquatic invertebrates are triggered by seasonal changes in water temperature, but other ecological factors may be important as well. To rule out the confounding effects of changing water temperature, we studied the seasonal dynamics of an aquatic invertebrate community and their effect on a top fish predator in a thermally stable freshwater spring in South Iceland. We sampled benthic invertebrates five times over a year and conducted a mark-recapture study on the top predator in the system, small benthic Arctic charr, Salvelinus alpinus (L.). We assessed variation in diet composition and feeding preferences by calculating the electivity and individual specialisation of each fish at each sampling time. There was a clear separation of winter and summer communities for the benthic invertebrates. The variation in prey availability was also reflected in the fish diet, with higher feeding selectivity in summer than in winter for the highly abundant Chironomidae larvae. In contrast, individual specialisation as a measure of intrapopulation niche variation was higher in winter when prey availability was lower. We furthermore found that groundwater amphipods might play an important role in the winter diet of spring-dwelling Arctic charr. In conclusion, seasonal variation in the invertebrate community is an important factor to consider and has the potential to alter the phenotype (e.g. growth rates) and behaviour (e.g. feeding preferences) of higher trophic levels. [ABSTRACT FROM AUTHOR]

As the global climate warms, the fate of lacustrine fish is of huge concern, especially given their sensitivity as ectotherms to changes in water temperature. The Arctic charr (Salvelinus alpinus L.) is a salmonid with a Holarctic distribution, with peripheral populations persisting at temperate latitudes, where it is found only in sufficiently cold, deep lakes. Thus, warmer temperatures in these habitats particularly during early life stages could have catastrophic consequences on population dynamics. Here, we combined lake temperature observations, a 1-D hydrodynamic model, and a multi-decadal climate reanalysis to show coherence in warming winter water temperatures in four European charr lakes near the southernmost limit of the species' distribution. Current maximum and mean winter temperatures are on average ~ 1 °C warmer compared to early the 1980s, and temperatures of 8.5 °C, adverse for high charr egg survival, have frequently been exceeded in recent winters. Simulations of winter lake temperatures toward century-end showed that these warming trends will continue, with further increases of 3–4 °C projected. An additional 324 total accumulated degree-days during winter is projected on average across lakes, which could impair egg quality and viability. We suggest that the perpetuating winter warming trends shown here will imperil the future status of these lakes as charr refugia and generally do not augur well for the fate of coldwater-adapted lake fish in a warming climate. [ABSTRACT FROM AUTHOR]

Possible effects of short‐term starvation on flesh quality in Arctic charr were studied in spring (March) and summer (August). Groups of juvenile Arctic charr (mean weight March 536 g ± 24; August 461 g ± 15 SEM) were starved for 1, 2 and 4 weeks (March) and 1, 2 and 3 (August). After each starvation period, the fish were slaughtered, and flesh samples collected in order to investigate quality and textural properties in the different experimental groups. Starvation had a positive effect on flesh quality giving firmer texture and lower gaping scores. Starved fish had lower cathepsin activity at slaughter, and a similar difference was seen one‐week post mortem. The results showed that the effect of starvation period was seasonally dependent. Starvation had a larger effect in summer, where a three‐week starvation resulted in firmer texture, whereas this was not seen during spring. [ABSTRACT FROM AUTHOR]

Arctic charr (Salvelinus alpinus) is a species of high economic value for the aquaculture industry, and of high ecological value due to its Holarctic distribution in both marine and freshwater environments. Novel genome sequencing approaches enable the study of population and quantitative genetic parameters even on species with limited or no prior genomic resources. Low coverage genotyping by sequencing (GBS) was applied in a selected strain of Arctic charr in Sweden originating from a landlocked freshwater population. For the needs of the current study, animals from year classes 2013 (171 animals, parental population) and 2017 (759 animals; 13 full sib families) were used as a template for identifying genome wide single nucleotide polymorphisms (SNPs). GBS libraries were constructed using the PstI and MspI restriction enzymes. Approximately 14.5K SNPs passed quality control and were used for estimating a genomic relationship matrix. Thereafter a wide range of analyses were conducted in order to gain insights regarding genetic diversity and investigate the efficiency of the genomic information for parentage assignment and breeding value estimation. Heterozygosity estimates for both year classes suggested a slight excess of heterozygotes. Furthermore, FST estimates among the families of year class 2017 ranged between 0.009 - 0.066. Principal components analysis (PCA) and discriminant analysis of principal components (DAPC) were applied aiming to identify the existence of genetic clusters among the studied population. Results obtained were in accordance with pedigree records allowing the identification of individual families. Additionally, DNA parentage verification was performed, with results in accordance with the pedigree records with the exception of a putative dam where full sib genotypes suggested a potential recording error. Breeding value estimation for juvenile growth through the usage of the estimated genomic relationship matrix clearly outperformed the pedigree equivalent in terms of prediction accuracy (0.51 opposed to 0.31). Overall, low coverage GBS has proven to be a cost-effective genotyping platform that is expected to boost the selection efficiency of the Arctic charr breeding program. [ABSTRACT FROM AUTHOR]

Ecosystems at high latitudes are exposed to some of the highest rates of climate warming on earth, and freshwater ecosystems in those regions are already experiencing extended ice‐free seasons and warmer waters. The dominant fish species in these ecosystems are cold‐water salmonids, which play a central ecological role in lake ecosystems, where they are often exposed to size‐selective fisheries that truncate their size and age distributions, making them potentially vulnerable to exploitation and environmental perturbations.Here, we address the combined effects of climate‐induced water temperature increase (using regionally downscaled climate models based on the RCP‐4.5 and RCP‐8.5 climate scenarios together with an air‐to‐water temperature model) and gillnet harvesting, over the period from 1950 to 2100, on the somatic growth, demography and vulnerability of Arctic charr Salvelinus alpinus (L.), using an eco‐genetic individual‐based model. The model captures successive annual life‐history events, including the key processes of size‐dependent mortality, age‐ and size‐dependent maturation described by a probabilistic reaction norm, temperature‐dependent growth, size‐dependent reproduction and density‐dependent recruitment.Our model predicts that higher water temperatures will increase the somatic growth of Arctic charr, leading to larger body size at age and increased stock biomass: for RCP‐8.5, we predict an 80% increase in stock biomass in the year 2100 relative to the year 2000 in the absence of fishing. Interestingly, this potential increase in biomass in future climate scenarios will be partially masked by harvesting: for a fishing mortality of 0.3 year−1, we predict a mere 40% increase in stock biomass in 2100 relative to 2000. Despite the predicted increase in stock biomass, yield will increase substantially only when fishing mortality is low. In addition, climate warming will accentuate the age‐truncation effect of harvesting, which will target younger individuals, including immatures, thus elevating the vulnerability of the population to environmental perturbations.Synthesis and applications. Our model‐based analyses highlight the combined effects of climate change and size‐selective fishing, emphasizing the emerging vulnerability of fish populations to multiple stressors. We recommend carefully climate‐adapted management strategies permitting only a narrow range of gillnet mesh sizes for inland fisheries at high latitudes. [ABSTRACT FROM AUTHOR]

Ecological opportunity is considered a crucial factor for adaptive radiation. Here, we combine genetic, morphological and ecological data to assess species and ecomorphological diversity of Artic charr in six lakes of a catchment in southernmost Greenland, where only charr and stickleback occur. Because the diversity of habitats and resources increases with lake size, we predict a positive association between lake size and the extent of ecomorphological diversity. The largest lake of the catchment harbours the largest Arctic charr assemblage known today. It consists of six genetically differentiated species belonging to five ecomorphs (anadromous, littoral benthic, profundal dwarf, planktivorous, piscivorous), of which the latter comprises two ecomorphologically extremely similar species. Lakes of intermediate size contain two ecomorphologically and genetically distinct species. Small lakes harbour one genetically homogeneous, yet sometimes ecomorphologically variable population. Supporting our prediction, lake size is positively correlated with the extent of ecomorphological specialization towards profundal, pelagic and piscivorous lifestyle. Furthermore, assemblage-wide morphospace increases sharply when more than one genetic cluster is present. Our data suggest that ecological opportunity and speciation jointly determine phenotypic expansion in this charr radiation. [ABSTRACT FROM AUTHOR]

Limited knowledge exists about the residing microbiome in gamete-related samples in fish. A potential effect between the seminal microbiome composition and sperm quality traits has been previously suggested in humans and livestock. Using a metabarcoding approach, we aimed to gain insights into the structure of the residing prokaryotes and microbial eukaryotes in ovarian fluid (n = 10) and milt (n = 84) from farmed Arctic charr - a species with highly variable reproductive success in captivity. In addition, sperm quality traits were recorded on the sampled males to investigate potential associations with the residing seminal microbiome. Higher microbial diversity was found in the ovarian fluid compared to the milt habitat. Even though the residing microbiome showed distinct differences between the two habitats, substantial overlap was observed, with >70% of the milt core microbiome being found in the ovarian fluid habitat. Statistically significant associations were found between the Shannon diversity index and sperm motility-related traits. Additionally, a fungal operational taxonomic unit (OTU) potentially belonging to the Leotiomycetes class was associated with sperm concentration and motility. Overall, our study documents the microbiome structure of gamete-related samples from Arctic charr. Even though some associations were obtained between sperm quality parameters and either microbiome diversity or with a fungal OTU, follow-up studies on a larger scale with more tank replicates are needed to confirm the robustness and causality of these relationships. • First report of the residing microbiome structure in gamete-related samples on fish • Associations were found between the Shannon diversity index and sperm motility-related traits. • A fungal operational taxonomic unit was associated with sperm concentration and motility. [ABSTRACT FROM AUTHOR]

Abstract Biodensity is a major factor affecting the production and welfare of farmed fishes. Arctic charr (Salvelinus alpinus) (average mass 176.9 ± 3.9 g) were held at biodensities of 30, 60, 90, 120, and 150 kg/m3 (4 replicates per treatment) during a 91 day study which examined key growth, stress physiology, and welfare parameters. During experimentation fish were fed to near satiety, and a random subsample of 20 fish (5 per replicate tank) were collected from each treatment every 21 days. Biodensity was found to have no significant effect on mortality rates or physical fin damage. Growth rates were lower in charr reared at the highest biodensities (120, and 150 kg/m3), while feed efficiency was negatively affected at both the highest (120, and 150 kg/m3) and lowest (30 kg/m3) biodensities. Plasma cortisol indicated that Arctic charr are more stressed at lower biodensities, but was not correlated with growth or feed efficiency measures. The results support an optimal biodensity range for charr culture between 60 and 90 kg/m3 to optimize production and welfare. Highlights • The purpose of this study was to provide an estimation of an optimal biodensity for Arctic charr aquaculture, with emphasis on production performance and welfare. High intensity aquaculture operations rely upon high biodensities which may compromise the welfare of the animals being farmed (Browman et al., 2018 ; Moccia, 2013). Thus, there are two drivers at play in determining an optimal biodensity with respect to the economics of fish growth and production performance, and the ethics associated with welfare consideration. Ultimately, the determination of an optimal biodensity for Arctic charr aquaculture must be the result of the careful consideration of these two approaches. • Biodensity had no effect on mortality, plasma glucose or fin damage (caudal and dorsal). However the combination of reduced growth rates (i.e. lower TGC's) observed at the high densities (120, and 150 kg/m3) and reduced feed efficiency (0.56–0.83) at the extremes (30, 120, and 150 kg/m3) suggest a density between 60 and 90 kg/m3 for optimal economic gains. The morphometric data presented here also provide additional considerations for the choice of stocking density in terms of the potential commercial productivity for Arctic charr. • Alternatively, the results of the welfare analyses show evidence of reduced stress (as assessed by circulating levels of plasma cortisol) at higher biodensities, with fish stocked at 150 kg/m3 exhibiting the lowest levels of all treatments. • These two approaches provide slightly different result on which to base a suggestion of an optimal biodensity. The economics approach suggests stocking at densities >30 kg/m3 and <90 kg/m3 for the benefit of producing product of similar quality while improving feed efficiency and growth. However, stocking at higher densities (150 kg/m3) resulted in reduced stress which is associated with the welfare status of farmed animals (Turnbull et al., 2008). Therefore, using a combination of an economics and ethics based approach, the suggested biodensity for Arctic charr aquaculture is somewhere in the range of 60–90 kg/m3 (actuals 65.1–99.0 kg/m3). Within this range, Arctic charr exhibited optimal feed efficiency and growth while maintaining cortisol levels below the 10 ng/mL which is a nominal threshold of cortisol implied for stressed salmonids (Pickering and Pottinger, 1989). [ABSTRACT FROM AUTHOR]

Abstract The reproductive performance of farmed Arctic charr exhibits substantial individual variation. The causes behind this variation have not yet been properly explained, despite the species relatively long history in aquaculture. The aim of the present study was to provide better understanding of the issue by evaluating parent and gamete traits in relation to fertility and offspring viability under routine hatchery conditions. Are losses mainly due to failed fertilisation or mortality? Are maternal or paternal factor more predominant? The study covered sex hormone status of the broodstock, egg traits (egg size and wateriness of egg batches), milt traits (volume, density, and sperm motility characteristics), and symmetry of early cell division. We found that the majority of offspring loss occurred as embryo mortality, although a significant additional loss could be assigned fertilisation failure. Fertilisation and mortality rates were not inter-correlated. Neither of the evaluated egg traits, egg size and wateriness of newly stripped egg batches, proved to be useful indicators of egg quality. With regard to sperm traits, milt density as well as several computer assisted sperm analysis (CASA) parameters, i.e. swimming speed (VAP, VSL, and VCL) and beat cross frequency (BCF), were correlated with reproductive performance and could potentially be used as quality indicators for Arctic charr. Together, male 17,20β-P levels and BCF explained 69.5% of the between male variation in proportion of successfully eyed eggs. The results support previous indications that post-ovulatory aging of oocytes is contributing to the impairment of reproductive performance in farmed Arctic charr. In addition, a significant paternal factor to this impairment has been exposed. However, the cause and mechanism involved are still far from clear. Highlights • Broodstock and gamete traits were evaluated together with fertility and embryo viability under routine hatchery conditions. • Embryo mortality, rather than failed fertilisation, was the main cause for egg loss in the studied Arctic charr broodstock. • Besides post-ovulatory aging of oocytes, paternal fertility issues, which needs to be investigated further, were revealed. [ABSTRACT FROM AUTHOR]

A comparative analysis of the mitochondrial DNA variability in Salvelinus taranetzi (and closely related taxa) from Asia and Salvelinus alpinus erythrinus from the Northwest Territories (NWT), North America, representing the Arctic phylogenetic group of charrs of the genus Salvelinus, has been carried out. The estimated divergence of the combined nucleotide sequences of the mtDNA CoI and Cytb genes and CR region within the discussed phylogroup varies in the range of 0.001–0.003 and does not exceed the intraspecific variability of S. taranetzi. A genealogical analysis confirms the phylogenetic proximity of S. a. erythrinus from NWT and S. taranetzi from Asia. By assuming a common origin of S. taranetzi and S. a. erythrinus, we have shown a significant differentiation between the geographical populations as a result of probable fragmentation of their common ancestor's range. According to the hierarchical analysis of molecular variance (AMOVA), the intergroup component accounts for the major part (83% of variance) of the mtDNA variability (490 bp, CR) with a low genetic diversity within the groups (10%). The region of Anadyr–Kolyma Basin, which determines the heterogeneity of the phylogroups, stands out on a broad geographical scale. [ABSTRACT FROM AUTHOR]

Arctic freshwater ecosystems have been profoundly affected by climate change. Given that the Arctic charr (Salvelinus alpinus) is often the only fish species inhabiting these ecosystems, it represents a valuable model for studying the impacts of climate change on species life‐history diversity and adaptability. Using a genotyping‐by‐sequencing approach, we identified 5,976 neutral single nucleotide polymorphisms and found evidence for reduced gene flow between allopatric morphs from two high Arctic lakes, Linne'vatn (Anadromous, Normal, and Dwarf) and Ellasjøen (Littoral and Pelagic). Within each lake, the degree of genetic differentiation ranged from low (Pelagic vs. Littoral) to moderate (Anadromous and Normal vs. Dwarf). We identified 17 highly diagnostic, putatively adaptive SNPs that differentiated the allopatric morphs. Although we found no evidence for adaptive differences between morphs within Ellasjøen, we found evidence for moderate (Anadromous vs. Normal) to high genetic differentiation (Anadromous and Normal vs. Dwarf) among morphs within Linne'vatn based on two adaptive loci. As these freshwater ecosystems become more productive, the frequency of sympatric morphs in Ellasjøen will likely shift based on foraging opportunities, whereas the propensity to migrate may decrease in Linne'vatn, increasing the frequency of the Normal morph. The Dwarf charr was the most genetically distinct group. Identifying the biological basis for small body size should elucidate the potential for increased growth and subsequent interbreeding with sympatric morphs. Overall, neutral and adaptive genomic differentiation between allopatric and some sympatric morphs suggests that the response of Arctic charr to climate change will be variable across freshwater ecosystems. The Arctic charr Salvelinus alpinus (Linnaeus, 1758) has a broad, circumpolar distribution and is the most northerly distributed freshwater fish species (primarily above 60°N; Klemetsen, 2010; Wilson et al., 2004). Using a genotyping‐by‐sequencing approach (Elshire et al., 2011), we investigate how Arctic charr morphs may respond to climate change by identifying neutral and putatively adaptive loci to determine the degree of reproductive isolation among morphs that can be attributed to genetic drift or local adaptation. [ABSTRACT FROM AUTHOR]

Abstract Refeeding, following a period of food deprivation will often lead to compensatory growth. Although many studies have focused on molecular mechanisms behind this accelerated growth response in fish, little is known on the roles of protein and metabolism. We also assessed, for the first time, the potential roles of miRNAs in regulating compensatory growth. Artcic charr, Salvelinus alpinus , a northern freshwater species, was deprived of food for 101 days and then fed to satiety for 126 days. The refeeding period resulted in compensatory growth, with a partial compensation of body mass. The feed deprivation period lead to a decrease in hepatosomatic index (HSI) and intestinal somatic index (ISI). HSI and ISI were then gradually replenished during early refeeding, following a lag phase prior to the compensatory growth response. mRNA transcripts regulating protein degradation via the autophagy pathway (Cathepsin D and Cathepsin L) in muscle were upregulated during feed restriction and downregulated after refeeding, which could allow for greater protein accretion in muscle, facilitating compensatory growth. Transcript levels from the ubiquitin proteasome pathway (Mafbx and Murf1) and the calpain system (Calpain 7 and Calpastatin) suggested that these pathways were not involved in regulating compensatory growth. Furthermore, we've shown that miRNAs (miR-29a and miR-223) could be involved in fish glycogen homeostasis during the early stages of refeeding. These findings provide a deeper understanding of the molecular mechanisms regulating growth in fish. [ABSTRACT FROM AUTHOR]

The Swedish breeding program for Arctic charr ( Salvelinus alpinus L.) has been running for 30 years and includes seven selected generations. In this study, we evaluated the differences in growth between the first generation of selected Arctic charr and the present generation. We demonstrate that not only has growth been improved through selective breeding but also that a change in the seasonal growth capacity has occurred. Selection has induced a high winter growth capacity, but the largest weight gain between generations was seen during summer. As a result of selective breeding, the production time to reach a slaughter weight of 600–700 g has been reduced by 10 months since the start of the breeding program in 1985, and improvements in the final weight have been of the magnitude of 11% per generation. To be able to keep up with the faster growth and altered seasonality of this strain, feeding management needs to be adapted. In this study, a model based on the theoretical energy need of the Arctic charr is presented, which makes it possible to make such adaptions in feeding management. [ABSTRACT FROM AUTHOR]

Abstract: The effects of two plant ingredients (solvent‐extracted soybean meal [SBM] and high‐protein sunflower meal [HPSFM]) and three inclusion levels (0 percent, practical diet containing 25 percent fish meal; 12.5 percent; and 25 percent) of these ingredients were investigated on the growth, feed utilization, gut histology and gene expression in the distal intestine of Arctic charr Salvelinus alpinus (average initial weight, 330.1 ± 8.9 g per fish). Feeding experimental diets for 12 weeks resulted in no difference between HPSFM diets in body weight gain (BWG), thermal‐unit growth coefficient (TGC), feed efficiency (FE), feed intake (FI) or pro‐inflammatory mRNA expression (PIE) with increasing dietary inclusion and between SBM FE, FI and PIE. Differences in quadratic contrasts were observed for nitrogen deposition rate (NDR) and nitrogen retention efficiency (NRE) (p < .05), whereby HPSFM diets elicited the strongest positive response. SBM resulted in linear reduction in BWG, TGC and distal intestine simple fold length and width measurements (p < .05) with stepwise increases in dietary inclusion, whereas dietary HPSFM had no effect. Histological observations of individual villi indicated several symptoms of non‐infectious subacute gastrointestinal enteritis in tanks fed SBM, many of which were not present in tanks fed HPSFM. The dietary HPSFM seems to be more adequate to replace fishmeal in Arctic charr diet than SBM, when fed at a level of up to 25 percent at the grow‐out stage. [ABSTRACT FROM AUTHOR]

Traditional sources of protein in fish feed for salmonids, such as fishmeal, face sustainability problems. Therefore, ingredients not attractive for human consumption are increasingly being considered for the development of future feeds. However, it is uncertain how this alternative range of ingredients will affect fish growth, quality and consumer opinion. In this experimental study, we tested a new fish feed on Arctic charr, containing a protein mixture from the Baltic Sea and yeast, all ingredients unattractive for human consumption. This feed comprised of sprat ( Sprattus sprattus ) and herring ( Clupea harengus ), blue mussels ( Mytilus edulis ) and baker's yeast ( Saccharomyces cerevisiae ), in a ratio of three parts to the whole. Fish fed with this feed grew 11.5% less than the control group. The digestibility and microscopy analysis of the faeces suggested a lower digestibility of the test feed, presumably caused by the fish's inability to utilize the nutrients from the yeast cells. Consumers' perceptions of the final product were evaluated through a sensory evaluation, indicating no differences in scores of fillet quality between the two treatments. Potential implications of these results are discussed in context of feed composition, quality and other factors including species biology and season, which are relevant topics in the discussions on feed sustainability. Statement of relevance Evaluating a feed mix unattractive for human consumption. [ABSTRACT FROM AUTHOR]

Two lab-based trials quantified the effect of a range of continuous light (LL) treatments overwinter on the somatic growth and incidence of sexual maturation in the fall age 2 of individually identified under-yearling Arctic charr (Labrador strain) at constant 10 °C. Controls were maintained under simulated natural photoperiod (LDN; Latitude 45°N). In trial 1 ( n = 120/trt, mean 54 g initial body weight), LL starting the 1st day of either October, November, December, January or February (all returned to LDN on April l) resulted in a step-wise reduction in maturity of 43, 55, 59, 67 73% compared with 77% in the control (sexes pooled). In trial 2 ( n = 90/trt, mean 24 g initial body weight), LL starting either August 13 or October 1 and ending April 1 reduced maturity to < 10%, compared to 33% (LL Dec1-Apr1) and 50% in the LDN controls. LL starting October 1 and ending either February 1, April 1 or June 1 were equally effective, resulting in < 15% maturity. The importance of returning from LL to LDN in spring to reduce maturity was demonstrated by the LL constant (Oct–Oct) treatment which resulted in relatively high maturity, 31%. The reduction of maturity rate was independent of both somatic growth and condition factor during winter in all treatment groups. Among fish that matured, the timing of completion of sexual maturation was affected by both the LL start and end date. [ABSTRACT FROM AUTHOR]

Arctic charr ( Salvelinus alpinus) are the northernmost distributed freshwater fish and can grow at water temperatures as low as 0.2 °C. Other teleost species have impaired immune function at temperatures that Arctic charr thrive in, and thus, charr may maintain immune function at these temperatures. In this study, a fibroblastic cell line, named ACBA, derived from the bulbus arteriosus ( BA) of Arctic charr was developed for use in immune studies at various temperatures. ACBA has undergone more than forty passages at 18 °C over 3 years, while showing no signs of senescence-associated β-galactosidase activity and producing nitric oxide. Remarkably, ACBA cells survived and maintained some mitotic activity even at 1 °C for over 3 months. At these low temperatures, ACBA also continued to produce MH class I proteins. After challenge with poly I:C, only antiviral Mx proteins were induced while MH proteins remained constant. When exposed to live viruses, ACBA was shown to permit viral infection and replication of IPNV, VHSV IVa and CSV at 14 °C. Yet at the preferred temperature of 4 °C, only VHSV IVa was shown to replicate within ACBA. This study provides evidence that Arctic charr cells can maintain immune function while also resisting infection with intracellular pathogens at low temperatures. [ABSTRACT FROM AUTHOR]

Identifying the processes by which new phenotypes and species emerge has been a long-standing effort in evolutionary biology. Young adaptive radiations provide a model to study patterns of morphological and ecological diversification in environmental context. Here, we use the recent radiation (ca. 12k years old) of the freshwater fish Arctic charr ( Salvelinus alpinus) to identify abiotic and biotic environmental factors associated with adaptive morphological variation. Arctic charr are exceptionally diverse, and in postglacial lakes there is strong evidence of repeated parallel evolution of similar morphologies associated with foraging. We measured head depth (a trait reflecting general eco-morphology and foraging ecology) of 1,091 individuals across 30 lake populations to test whether fish morphological variation was associated with lake bathymetry and/or ecological parameters. Across populations, we found a significant relationship between the variation in head depth of the charr and abiotic environmental characteristics: positively with ecosystem size (i.e., lake volume, surface area, depth) and negatively with the amount of littoral zone. In addition, extremely robust-headed phenotypes tended to be associated with larger and deeper lakes. We identified no influence of co-existing biotic community on Arctic charr trophic morphology. This study evidences the role of the extrinsic environment as a facilitator of rapid eco-morphological diversification. [ABSTRACT FROM AUTHOR]

Sympatric speciation is thought to be strongly linked to resource specialization with alternative resource use acting as a fundamental agent driving divergence. However, sympatric speciation through niche expansion is dependent on foraging specialization being consistent over space and time., Standard metabolic rate is the minimal maintenance metabolic rate of an ectotherm in a post-absorptive and inactive state and can constitute a significant portion of an animal's energy budget; thus, standard metabolic rate and growth rate are two measures frequently used as an indication of the physiological performance of individuals. Physiological adaptations to a specific diet may increase the efficiency with which it is utilized, but may have an increased cost associated with switching diets, which may result in a reduced standard metabolic rate and growth rate., In this study, we use the diet specialization often seen in polymorphic Arctic charr ( Salvelinus alpinus) populations to study the effects of different prey on standard metabolic rate and growth rate as well as the effects that early prey specialization may have on the ability to process other prey types efficiently., We found a significant effect of prey type on standard metabolic rate and growth rate. Furthermore, we found evidence of diet specialization with all fish maintaining a standard metabolic rate and growth rate lower than expected when fed on a diet different to which they were raised, possibly due to a maladaptation in digestion of alternative prey items., Our results show that early diet specialization may be reinforced by the elevated costs of prey switching, thus promoting the process of resource specialization during the incipient stages of sympatric divergence. [ABSTRACT FROM AUTHOR]

The effects of dietary lipid oxidation on fish are diverse and contradictory. In this study, herring oil was oxidized to five different levels (peroxide values (POV): 20.44, 182.97, 56.12, 33.27 and 0.00 meq kg − 1 ) and used to formulate five experimental diets. Juvenile Arctic charr ( Salvelinus alpinus , mean body mass ± SD: 2.41 ± 0.11 g) were reared on the five diets for 67 days. In another experiment, juvenile Nile tilapia ( Oreochromis niloticus ) (1.71 ± 0.40 g) were reared on three diets formulated with oxidized oils having POV of 19.55, 447.27 and 32.72 respectively, for 90 days. Growth responses were monitored in quadruplicate groups of 60 individuals of Arctic charr and 100 for Nile tilapia, respectively. The activities of superoxide dismutase (SOD), catalase (CAT) and glutathione peroxidase (GPx) were only studied in Arctic charr. At the end of the study, the Arctic charr group reared on a diet with oils in the primary oxidation state had significantly lower body mass and specific growth rate, but higher hepatosomatic index compared to the rest of the groups. The activities of CAT and GPx increased with dietary lipid oxidation while that of SOD remained fairly stable. In Nile tilapia, both final body mass and condition factor were significantly lower in the group fed fresh oil than in the groups fed oxidized oils. Fillet lipid content decreased with lipid oxidation while ash and protein did not differ amongst tilapia groups. The results suggest that Arctic charr are more susceptible to lipid oxidation than are Nile tilapia. These differences may be the result of species differences in tolerance to oxidized lipids, variable lipid intake or access to vitamin E/tocopherol in feed. Statement of Relevance Important for Arctic charr and Nile tilapia feed development. [ABSTRACT FROM AUTHOR]

Phenotypic variation in populations of fishes that inhabit postglacial lakes is often associated with trophic specialisations. A common sympatric foraging divergence seen in Arctic charr is into either plankton or littoral-zoobenthos feeding specialisms. In this study, we report a sympatric polymorphic Arctic charr population which is not centred on this divergence but instead manifests as a plankton (pelagic)-profundal zoobenthos foraging specialisms. The head shape of profundal fish was round and robust, the body thick set and pectoral fins long and wide. In contrast, the head of pelagic fish was pointed and slender, the body fusiform in shape and with short, narrow pectoral fins. There was no difference between profundal and pelagic fish in gill raker number. Body lipid content was significantly higher in pelagic fish as were the number or Diphyllobothrium cysts. The carbon isotope ratio was more heavily depleted in profundal fish. There was no dietary overlap in the prey items recovered from stomach contents of profundal and pelagic fish. We suggest the proximate driver behind the sympatric divergence was the successful exploitation of the profundal zone. The consequences of this have led to the development of adaptations in morphology and behaviour to support and maintain this divergence. [ABSTRACT FROM AUTHOR]

Arctic charr, Salvelinus alpinus (L.), occur as anadromous, resident, and landlocked populations within their circumpolar distribution. While resident Arctic charr reside in freshwater their entire life, anadromous Arctic charr migrate to sea in the summer due to the increased resource availability, but return to freshwater to overwinter and/or spawn. The migratory behaviour in Arctic charr is generally restricted to the northern range of their distribution area. The objective of this study was to estimate the amount of straying and contemporary gene flow among anadromous Arctic charr from eight river systems in northern Norway to illuminate the role of straying for the contemporary genetic stability of the populations. The results revealed that Arctic charr frequently stray among watercourses, especially among those in close geographical proximity, although strays were found nearly 500 km from their river of origin. While straying was revealed among six river systems, the results also revealed limited or no contemporary gene flow among the nine populations identified in the eight sampled river systems. The study also shows that Arctic charr may be a potential host for spreading diseases and parasites among watercourses. [ABSTRACT FROM AUTHOR]

An evaluation of different thermal regimes during incubation of Arctic charr Salvelinus alpinus L. egg was conducted with regard to embryo survival and development. The study consisted of two major parts: In experiment A, a range of commonly used thermal regimes, constant and variable ranging from 2.7°C to 7°C, were tested for differences in embryo survival and developmental status of newly hatched alevins. Experiment B assessed the timing of a shift from autumn (6°C) to winter temperature (2.5°C) and its effect on embryo survival and the occurrence of spinal deformities in newly hatched alevins. In general, incubations that were initiated at temperatures below 3°C resulted in significantly higher mortality rates and spinal deformity frequencies than other treatments. Hence, Arctic charr eggs require an initial warmer period for unimpaired embryonic development. A general negative correlation was found between the duration of this warmer period (6°C) and both mortality rates and frequency of spinal deformities. The total absence of the 6°C period had the most detrimental effect, with deformity frequencies at least four times higher than all treatments with an initial warmer period. The upper incubation temperature threshold was not reached in the study. The highest temperature tested (7°C) did not result in excess mortality or increased deformity frequency. Higher incubation temperature resulted in less developed alevins at hatching, i.e. alevins were smaller with more yolk remaining. However, measurements on alevins from incubations at variable temperatures revealed different temperature effects on growth and yolk consumption during different parts of embryonic development. [ABSTRACT FROM AUTHOR]

To address the problem of high maturity at 2 years of age among Salvelinus alpinus (Labrador strain), PIT-tagged yearlings (ca. 110 g) were reared for 18 weeks overwinter (Nov. 16 to Apr. 1) under six treatments (90 fish per treatment) that combined three factors: photoperiod (natural day length, LDN or 24 h light, LL), temperature (10 or 5 °C), and food (fed daily or no food). On April 1 all fish were returned to LDN, 10 °C and fed daily for a further six months. In November, the maturity rate was very high among fish reared the previous winter under LDN and fed daily at both 10 °C (♀ 94%, ♂ 43%) and 5 °C (♀ 87%, ♂ 45%). Replacing LDN with LL overwinter, at 10 °C halved the maturity rate (♀ 49%, ♂ 19%), and at 5 °C eliminated maturity among females, and male maturity was 6%. Food deprivation for 18 weeks posed no health problems, and combined with LL also was highly effective at preventing maturation, both at 10 °C (♀ 0%, ♂ 2%) and 5 °C (♀ 0%, ♂ 7%). Compensatory growth following the suppression of growth overwinter indicates this approach to reducing maturity can be a commercially viable means to produce 1 kg immature product around 2 years old. A new two-step gating mechanism is proposed to explain the photoperiod prevention of maturation, one independent of somatic growth, the other dependent. Statement of relevance This study shows that the combination of LL, reduced temperature and food deprivation can significantly reduce the incidence of maturation and improve the productivity among diploid Arctic charr. This combination approach can potentially be applied to other farmed salmonids and non-salmonids to improve the efficacy of controlling sexual maturation. [ABSTRACT FROM AUTHOR]

The flooding dose technique of Garlick et al. ( 1980 ) has become the main method for measuring tissue and whole-animal rates of protein synthesis in ectotherms. However, single tissue samples are used to determine rates of protein synthesis and no studies have examined the pattern of flooding in large tissues such as the white muscle in fishes, which can comprise up to 55% of the wet body mass of a fish and which is poorly perfused. The present study has examined, for the first time, the patterns of flooding and measured rates of protein synthesis in five different regions of the white muscle in the Arctic charr Salvelinus alpinus ranging in size from 25 g to 1.6 kg following a flooding dose injection of L-[ 3 H]-phenylalanine. The results indicate that the degree of flooding ( i.e. free pool specific radioactivity relative to that of the injection solution) and elevation in free phenylalanine concentrations can vary between regions but the calculated fractional rates of protein synthesis were similar in four of the five regions studied. The variability in rates of protein synthesis increased with body size with greater variability observed between regions for fish > 1 kg in body mass. For consistency between studies, it is recommended that samples are taken from the epaxial muscle in the region below the dorsal fin when measuring fractional rates of white muscle synthesis in fishes. [ABSTRACT FROM AUTHOR]

The bacterium Aeromonas salmonicida ssp. achromogenes (Asa) causes atypical furunculosis in salmonids that may lead to extensive financial losses in intensive fish farming. The commercially available vaccine commonly used against the ssp. achromogenes in the production of Arctic charr in Iceland has been developed for Atlantic salmon (Salmon salar) against the subspecies salmonicida which causes typical furunculosis, but it has insufficient efficacy in Arctic charr. In response to this, a novel vaccine against Asa in Arctic charr was developed in cooperation with Spanish vaccine company; HIPRA, and the antibody response of Arctic charr against Asa investigated using enzyme-linked immunosorbent assay. Fish used for testing were vaccinated using the novel, monovalent autogenous experimental vaccine and a commercially available vaccine Alpha Ject® 3000 developed for Atlantic salmon that was used as a comparison. The study was conducted in commercial production units where the fish were continually exposed to natural outbreaks of atypical furunculosis. Blood samples were collected from the fish prior to vaccination and thereafter at approximately ten-week intervals in each production unit throughout the production period until the fish reached harvesting size. Fish growth and mortality was recorded throughout the study. The results indicated that both vaccines induced antibody response in fish against Asa antigens and that antibody titers obtained during the first weeks following vaccination were maintained throughout the production period. However, significantly higher antibody titers were observed in fish vaccinated with the experimental novel vaccine and fish mortality was significantly lower in production units containing fish vaccinated with the novel vaccine in comparison to the Alpha Ject 3000® vaccine. These results suggest that the novel vaccine may be a promising candidate for protective immunity against atypical furunculosis caused by Asa in Arctic charr. • The specific antibody responses in Arctic charr against Aeromonas salmonicida ssp. achromogenes were analyzed using ELISA. • A novel experimental vaccine developed for Arctic charr and a commercial vaccine developed for Atlantic salmon were compared. • The novel experimental vaccine induced a higher specific antibody response and with more extended duration. • Significantly reduced fish mortality was observed in the group vaccinated using the experimental vaccine. [ABSTRACT FROM AUTHOR]

• A novel evolutionary model (JBGP) was developed. • The JBGP classifies the presence of Arctic charr in the Teno River catchment. • The JBGP is superior to the jittered decision tree model. • Macroinvertebrates, mires and slope are the dominant indicators. Arctic charr is one of the fish species most sensitive to climate change but studies on their freshwater habitat preferences are limited, especially in the fluvial environment. Machine learning methods offer automatic and objective models for ecohydrological processes based on observed data. However, i) the number of ecological records is often much smaller than hydrological observations, and ii) ecological measurements over the long-term are costly. Consequently, ecohydrological datasets are scarce and imbalanced. To address these problems, we propose jittered binary genetic programming (JBGP) to detect the most dominant ecohydrological parameters affecting the occurrence of Arctic charr across tributaries within the large subarctic Teno River catchment, in northernmost Finland and Norway. We quantitatively assessed the accuracy of the proposed model and compared its performance with that of classic genetic programming (GP), decision tree (DT) and state-of-the-art jittered-DT methods. The JBGP achieves the highest total classification accuracy of 90% and a Heidke skill score of 78%, showing its superiority over its counterparts. Our results showed that the dominant factors contributing to the presence of Arctic charr in Teno River tributaries include i) a higher density of macroinvertebrates, ii) a lower percentage of mires in the catchment and iii) a milder stream channel slope. [ABSTRACT FROM AUTHOR]

In relation to stock enhancement programmes, wild salmon broodfish have been routinely screened for the presence of Renibacterium salmoninarum antigens (Rs-Ag) for decades. A sudden increase in the prevalence of Rs-Ag experienced caused extensive problems to this industry as eggs from positive fish are discarded. The prevalence and level of Rs-Ag were examined in resident and anadromous salmonids in the River Ellidaár system and the progress of Rs-Ag in a cohort of salmon followed. Both prevalence and Rs-Ag levels were high in resident salmonids and emigrating salmon smolts in the river system. When the smolts re-entered their home river as adults the following summer, they were almost free of Rs-Ag, but the longer they stayed in the river, the more Rs-Ag they acquired; the majority being positive at spawning. This study demonstrates a high level of Rs-Ag in salmonids in the River Ellidaár system which significantly reduces in the salmon during its seawater phase. Accordingly, it seems ideal to sample salmon broodfish as soon as possible after ascending the river and subsequently transfer to Rs-free environment for storage until stripping, which could result in lower Rs-prevalence and minimize the problems that stock enhancement programmes have faced due to Rs-positive wild broodfish. [ABSTRACT FROM AUTHOR]

Apparent digestibility coefficients ( ADCs) for four protein-rich alternative feed ingredients, intact baker's yeast ( Saccharomyces cerevisiae), extracted baker's yeast ( S. cerevisiae), zygomycetes ( Rhizopus oryzae) and blue mussel ( Mytilus edulis), were determined for Arctic charr ( Salvelinus alpinus) and Eurasian perch ( Perca fluviatilis). Diets contained 30% of test ingredients, and ADCs were compared to a reference diet containing fish meal. For Arctic charr, ADCs for dry matter ( DM, 71-99%), sum of amino acids ( SAA, 84-99%) and gross energy (70-99%) were significantly lower for intact S. cerevisiae than for extracted S. cerevisiae, R. oryzae and M. edulis. The ADCs for the indispensable amino acids ( IAA) in Arctic charr varied between 84% and 99%. Significant differences were found in ADCs for IAA between the test ingredients for Arctic charr, with higher values for extracted S. cerevisiae and M. edulis. The ADCs in Eurasian perch varied between 83% and 95% for DM, 89% and 98% for CP, 92% and 100% for SAA, 81% and 96% for gross energy. No significant differences were found for ADCs between the test ingredients in Eurasian perch, indicating a species effect on digestibility. Furthermore, the absence of intact cell walls had a positive effect on digestibility of S. cerevisiae for Arctic charr. [ABSTRACT FROM AUTHOR]

This study examined the abiotic and biotic characteristics of ecosystems that allow expression of a life history called ferox trout, the colloquial name given to brown trout Salmo trutta adopting a piscivorous life history strategy, an apex predator in post-glacial lakes in northern Europe. One hundred and ninety-two lakes in Scotland show evidence of currently, or historically, supporting ferox S. trutta; their presence was predicted in logistic models by larger and deeper lakes with a large catchment that also support populations of Arctic charr Salvelinus alpinus. [ABSTRACT FROM AUTHOR]

The Swedish breeding programme for Arctic charr aims to improve traits that are important for farming. Selection has been ongoing since the 1980s, and the aim of this study was to re-estimate the genetic parameters in the selected population. In addition, the genetics of skin pigmentation was studied, as previous work indicated a relationship between pigmentation and the ability to cope with stress. One hundred twenty-five full sib families of Arctic charr were hatched and reared separately until they were individually tagged (n = 12,266). In connection with the tagging, three replicates were formed, which were subsequently reared at different sites. The genetic relationships were known from a seven-generation pedigree. Body weight and length were at one site measured at six occasions until 27 months old, and these measurements were used to estimate the DGC (daily growth coefficient) and condition factor. At a second site fish were measured at 21 and 27 months age and at a third site at 27 months age. Skin pigmentation was measured using image analysis. The final weight at 27 months of age varied widely between rearing sites, ranging from 529 g to 1443 g. Weight heritability differed among the sites, at 0.45, 0.11, and 0.07. At one of the sites, where growth was followed closely, weight heritability varied among growth periods, ranging from 0.01 to 0.25, and similar results were obtained for the DGC. In contrast, condition factor heritability did not show such pronounced variations within and among sites. The magnitude of the differences in heritability of weight and growth among different sites that was observed here was not observed previously with this charr population. In particular, the low heritability among the fastest growing fish is unprecedented. Skin pigmentation showed a high heritability of 0.76, indicating a strong additive genetic component. At most ages, pigmentation showed a weak positive genetic correlation with growth. The genotype environment interaction (GEI) was estimated using genetic correlations among sites. For the final weight, genetic correlations were high, indicating weak GEI, although the presence of GEI was suggested from the DGC data. Statement of relevance The ms will impact charr breeding for commercial farming. [ABSTRACT FROM AUTHOR]

The evaluation of new diet composition is commonly achieved by performing time-consuming growth trials, which may negatively impact the welfare of a large number of fish if the feed is not accepted. Instead, the fish's behavioural responses to a new diet composition can be used as a first step in the evaluation of new diet composition. The taste acceptance of a new diet by Arctic charr ( Salvelinus alpinus ) was evaluated over 16 days based on the self-selection of a test diet and a control diet. The test diet contained ingredients from the nutrient-enriched Baltic Sea, and it is hoped that this diet can contribute nutrients to the nutrient-poor waters in northern Sweden in which Arctic charr are farmed. The main ingredients in the test feed were blue mussel meat ( Mytilus edulis ), meat from sprat ( Sprattus sprattus ) and herring ( Clupea harengus ), baker's yeast ( Saccharomyces cerevisiae ), fish oil and regionally produced rapeseed oil. Individual fish ( n = 15) were allowed to choose between abundances of both the test diet and a fishmeal based control diet that mimicked a standard feed for Arctic charr. After only a few days, the fish demonstrated a significant preference for the Baltic Sea test feed. These results may depend on betaine, which was found at concentrations that were four times higher in the test feed than in the control feed. Betaine is a known attractant for many fish species and is abundant in marine animals, such as mussels. Thus, the test diet can be evaluated further without additional taste stimulants before the new feed formula can be used commercially to ensure fish welfare, the product quality and the economic feasibility of the new formula. [ABSTRACT FROM AUTHOR]