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The phytoplankton biomass (chlorophyll-a, Chl-a) is directly related to the total production of lakes. Chl-a in temperate lakes oscillates on an annual scale. However, Chl-a oscillations in tropical lakes have hardly been documented, particularly over multiple years. Here, we described the periodicity of the Chl-a by performing a continuous wavelet analysis of 21 years (1998–2018), monthly Chl-a data from tropical, saline Lake Alchichica, Mexico. Parallel wavelet analyses were made on environmental time series (i.e., euphotic zone, mixed layer, temperature, dissolved oxygen concentration, dissolved inorganic nitrogen, soluble reactive phosphorus, soluble reactive silica). Throughout the time series, the wavelet transforms identified a regular and predictable annual cycle of the Chl-a associated with the warm-monomictic thermal-mixing pattern, the variability of the annual Chl-a cycle, and the presence of other cyclicities, 2-year and ~4–5 years, associated with external forcing agents (e.g., North Pacific Oscillation). The water quality variables display a recurrent annual cycle. At the same time, the trophic variables (nutrient concentration) showed the same cyclicity as Chl-a (1-year, 2-year, and 4-year), suggesting the external forcing agents promote Chl-a augment through nutrient increase made available from stronger, deeper, mixing periods.

In this review, we include rotifers, copepods, and cladocerans, including other groups not usually deemed as zooplankters: i.e., protists, acari, and large branchiopods. The objectives of this study were to integrate the dispersed literature on the taxonomy and diversity of these freshwater zooplankton groups and to explain (1) how these contributions can be arranged in distinct historical periods and (2) how this knowledge has allowed the detection of exotic and threatened species. We divided the freshwater zooplankton studies in Mexico into three historical periods: the first one comprised the 1840s to the 1940s when foreign researchers carried out most studies during several expeditions. Spanish researchers promoted surveys on different zooplankton taxa at the end of this first period. The second period, from the early 1950s to the end of the 1990s of the XX century, showed a remarkably increased research activity in its last ten years only (that is, during the 1990s to 2000), represented by contributions of a new generation of Mexican zooplanktologists. This period yielded more complete zooplankton listings and detailed morphological descriptions of rotifers, cladocerans, copepods, and large branchiopods. The third period started from the year 2000 to date. During this time, listings and online faunistic baselines based on integrative taxonomy have been the primary trend. An account of exotic zooplankters and conservation issues of several native species are discussed. The results of this review show that the knowledge of the freshwater zooplankton of this country has increased significantly over the last 40 years, with at least 408 first records of species for Mexico. Currently, the knowledge of Mexican freshwater zooplankton is among the most complete in the world. However, it is estimated that only a small fraction of the true diversity has been documented.

Nitrogen and phosphorous loading drives eutrophication of aquatic systems. Lakes and reservoirs are often effective N and P sinks, but the variability of their biogeochemical dynamics is still poorly documented, particularly in tropical systems. To contribute to the extending of information on tropical reservoirs and to increase the insight on the factors affecting N and P cycling in aquatic ecosystems, we here report on a long-term N and P mass balance (2003–2018) in Valle de Bravo, Mexico, which showed that this tropical eutrophic reservoir lake acts as a net sink of N (−41.7 g N m y) and P (−2.7 g P m y), mainly occurring through net sedimentation, equivalent to 181% and 68% of their respective loading (23.0 g N m y and 4.2 g P m y). The N mass balance also showed that the Valle de Bravo reservoir has a high net N atmospheric influx (31.6 g N m y), which was 1.3 times the external load and likely dominated by N fixation. P flux was driven mainly by external load, while in the case of N, net fixation also contributed. During a period of high water level fluctuations, the net N atmospheric flux decreased by 50% compared to high level years. Our results outlining water regulation can be used as a useful management tool of water bodies, by decreasing anoxic conditions and net atmospheric fluxes, either through decreasing nitrogen fixation and/or promoting denitrification and other microbial processes that alleviate the N load. These findings also sustain the usefulness of long-term mass balances to assess biogeochemical dynamics and its variability., This research was funded by UNAM, PAPIIT-IN207702 and CONACYT-SEMARNAT, C01-1125 projects to M.M-I

The nitrogen (N) cycle is highly dependent on microbial processes. Distribution of these communities is one of the most important factors in the variation of the N cycling in warm‐monomictic lakes. However, the effects of the alternation of water stratification and mixing periods on the ecology of microbial communities involved in these processes are rarely studied in this type of aquatic ecosystem. We explored vertical and seasonal patterns of picoplankton and the genetic potential for ammonium oxidation (amoA gene for bacteria and archaea), denitrification (nirS and nirK), anammox (hzsA), and DNRA (nrfA) and their relationships with the main limnological variables in Lake Alchichica (Central Mexican Plateau) to provide insight into the distribution and importance of these planktonic communities in warm‐monomictic tropical lakes. Ten depths were sampled during late stratification (November 2015) and mixing (February 2016) periods, covering the epilimnion, metalimnion (oxycline), and hypolimnion layers in the first case. We showed that temperature and oxygen stratification shaped the distribution of picoplankton and functional N genes in this lake. These communities also varied in relation to nutrient availability and underwent temporal changes throughout the water column. The amoA genes, along with autotrophic picoplankton, were more abundant during the stratification, indicating that nitrification could be potentially more important during this period, mainly at the oxycline layer. Denitrifying genes showed strong variations during the stratification period, with highest gene copy numbers at the oxycline and hypolimnion layers. Anoxic conditions were characterised by a relative increase in the abundance of the nrfA gene with depth, which was positively correlated with NH₄ ⁺ concentration. On the other hand, the hzsA gene was not detected in any sample. Our findings highlight the importance of thermal stratification as one of the main factors influencing the genetic potential for N transformations within the water column in warm‐monomictic tropical lakes.

The response of planktonic (phytoplankton, ciliates, rotifers and crustaceans) and littoral (Ephemeroptera, Plecoptera, Trichoptera and Heteroptera: Nepomorpha) assemblages to chemical recovery was studied over a twelve-year period (1999–2011) in eight glacial lakes in the Bohemian Forest (central Europe). The region suffered from high atmospheric pollution from the 1950s to the late 1980s, but has since been recovering from acidification due to 86% and 44% decrease in sulphur and nitrogen deposition, respectively, during the 1990s–2000s. Despite the rapid improvement in water chemistry of all the eight studied lakes, only four have partly recovered so far (low-aluminium lakes), while the other four lakes still remain strongly acidic (high-aluminium lakes). Although biotic responses (especially in the low-Al lakes) showed important signs of recovery, such as reappearance of some indigenous or acid-sensitive species, decline in eurytopic acid-tolerant species and colonisation by vagile species, the assemblages of all the lakes still suffer from acid stress. Our results also indicate an increasing role of biotic interactions between colonisers and residents leading to the reconstruction of aquatic food webs in the low-Al lakes.

noxia, and ciliates might play a very important role in the plankton community budget there. We analysed changes in the composition and biomass of the ciliate assemblage and other microbial loop components throughout the oxycline just at the end of stratification in a warm-monomictic lake, Lake Alchichica, Mexico (four samplings: 2006-2008, 2010); the results were compared with those obtained from another lake from the region, La Preciosa, sampled in 2010. Bacteria, autotrophic picoplankton (APP) and flagellates were analysed using epifluorescence microscopy. Ciliates were evaluated either in DAPI stained samples (looking for pigmented organelles and/or ingested phototrophs) or in quantitative protargol stain (QPS) permanent preparations, where they were identified at the genus or species level. The end of the stratification period in Lake Alchichica was characterized by almost uniform heterotrophic picoplankton (HPP) numbers (106 cells mL-1) throughout the water column. Meanwhile, APP showed epilimnetic and/or metalimnetic maxima of 105 cells mL-1 followed by an order of magnitude drop in the hypolimnion. A very important peak (105 cells mL-1) of the autotrophic or mixotrophic flagellate Pyramimonas sp. was observed repeatedly above and within the oxycline of Lake Alchichica. Ciliate biomass maxima were found around the oxycline and in the above-bottom layer. The top of the oxycline was dominated by Euplotes spp. and Spirostomum teres fine- to coarse-filter feeders (feeding upon APP, nanodiatoms and algae). Raptorial haptorids (in particular, Phialina sp.) were the second most important group, generally occupying the layer below euplotids, followed by Holophrya and Prorodon facultative anaerobic prostomes. Sometimes, strictly anaerobic Caenomorpha sp. was found to be important in the anoxic hypolimnion. Minute picoplankton feeding species (both APP and heterotrophic bacteria feeders) were important throughout the water column: in the epilimnion, vorticellids (2006-2008) or scuticociliates (2010) dominated. Typically, the scuticociliate maximum was located in the oxycline and/or above the bottom. Some microaerophilic species were isolated; thus, their identification could be carried out. However, the apparent polymorphic ciliate life cycles were not described completely, and the species composition was only estimated: two dominant species (SC 1 – Cristigera-like and SC 2 – Cyclidim-like) covered nearly the total scuticociliate biomass. Strictly anaerobic scuticociliates were not isolated but observed in the deepest layers of the lake (bacteria symbiotic Isocyclidium globosum and Cristigera sp.). Significant statistical relation within the ciliate distribution and environmental variables was not confirmed due to unique species composition in the respective years. However, general trends in the distribution of ciliates on a species level were observed. Scuticociliates, including two important tentatively identified species, did not present unambiguous ecological position, and the study of their live cycle should be the next step in investigations.

The prokaryotic picoplankton (PPP) composition was studied in the tropical high-altitude saline Lake Alchichica, Mexico, using fluorescence in situ hybridization. Thetemporal dynamics of the PPP followed the annual hydrodynamics of this warm-monomictic lake. The abundance of both the autotrophic (APP) and heterotrophic(HPP) functional groups of PPP increased during the mixing period to reachmaximum values at the beginning of the stratification period, when the highesthybridization percentages for the domain Bacteria were also registered. The increasein PPP was most likely related to the availability of nutrients soon after the start ofthe mixing period. Throughout the rest of the stratification, APP and HPP decreasedsignificantly together with the hybridization percentages, mostly related to theexhaustion of nutrients in the mixing zone. In spite of being oligosaline, the prokar-yotic composition of Lake Alchichica was more typical of fresh than of saltier waterbodies. During the mixing period, the Pcy and Planctomycetes (PLA) formed the mainbacterioplankton fraction. Meanwhile throughout the stratification period PLA,Betaproteobacteria (BET) and Gammaproteobacteria (GAM) were the most abun-dant groups in the epilimnion and metalimnion. The domain Archaea (ARCH), BET,GAM, Paracoccus the principal denitrifier of the Alphaproteobacteria and sulphate-reducing bacteria were dominant in the oxycline and hypolimnion in associationwith dissolved oxygen depletion and the nutrient enrichment of the deeper strata.KEYWORDS: prokaryoplankton; warm-monomictic; oligosaline; tropical high-altitude

The recent interest in the plankton structures and dynamics in tropical and subtropical lakes has revealed important trends that set these lakes apart from temperate lakes, and one of the main differences is the enhanced importance of the microbial food web with respect to net plankton. Ciliates are a key component of subtropical and tropical microbial webs because of their role as dominant picoplankton grazers and their ability to channel picoplankton production to the uppermost trophic levels. Plankton ciliates have been found to play a crucial role in the survival of fish larvae in lakes that share several features with Lake Catemaco, a eutrophic tropical Mexican lake. Therefore, the plankton ciliate composition, abundance, and biomass of Lake Catemaco were studied to assess their role in the microbial food web. The data were obtained from surface and bottom water samples collected at eleven points during three surveys in 2011 and an additional survey in 2013, with the surveys covering the local climatic seasons. The most abundant components of the plankton ciliate assemblages were small prostomatids (Urotricha spp.), choreotrichs (Rimostrombidium spp.), cyclotrichs (Mesodinium and Askenasia), and scuticociliates (Cyclidium, Cinetochilum, Pleuronema, and Uronema). Other important ciliates in terms of abundance and/or biomass were haptorids (Actinobolina, Belonophrya, Monodinium, Paradileptus, and Laginophrya), Halteria, oligotrichs (Limnostrombidium and Pelagostrombidium), Linostomella, Bursaridium, Cyrtolophosis, and Litonotus. The ciliate abundance averaged 57 cells mL-1 and ranged from 14 to 113 cells mL-1. The mean ciliate biomass was 71 µg C L-1 and ranged from 10 to 202 µg C L-1. Differences were not detected in ciliate abundance or biomass between the sampling points or sampling depths (surface to bottom); however, significant differences were observed between seasons for both variables. Nano-sized filamentous cyanobacteria were the most abundant component of the plankton, and their abundance was assessed through epifluorescence microscopy counts. The autotrophic and heterotrophic picoplankton abundance was measured through epifluorescence, and their abundance and biomass were higher at the study site relative to other shallow freshwater ecosystems. The total ciliate biomass distribution patterns were similar to those of filamentous cyanobacteria and autotrophic or heterotrophic picoplankton, although the nanociliate biomasses peaked when the picoplankton and filamentous cyanobacteria were least abundant. The consequences of this increased importance of ciliates on the structure of the plankton at Lake Catemaco will be discussed along with the probable causes.

Seasonal changes in the structure of ciliate assemblages in eleven oligotrophic mountain lakes at different altitudes, covering a wide pH range from 4.9 to 6.9, were studied. Seven mountain lakes lay above the timberline (0vre NeÅdalsvatn and Stavsvatn, Norway; Lochnagar, Scotland; Starolesnianske pleso and Nizne Terianske pleso, Slovak Republic; Chuna ozero, Russia; Lago Paione Superiore, Italy) and four acidified lakes (Cerne, Certovo, Plesne and Prasilske jezero, Sumava Mountains, Czech Republic) in the mountain forest. Additionally, thr tropical high latitude Lago de Alchichica (Mexico) was analysed. Ciliate taxons were identified using the quantitative protargol staining approach, and feeding patterns were tentatively detected by using fluorescence microscopy methods. Nano- to microphytoplankton hunters and/ or mixotrophic ciliates prevailed in all acidic lakes. Numbers of ciliates were very low (seasonal lake mean below 200 cells/I) except in two Tatra lakes (to 21000 cells/I). Prostomes of the genera Urotricha, Holophrya and Prorodon dominated in most of the samples, both numerically as well as in biomass (seasonal lake mean from 13.6 to 100% and 4.6 to 99.7%, respectively), particularly in acidified water lakes (Starolesnianske, Certovo and Prasilske jezero). Among mixotrophs, oligotrichs of genera Pelagostrombidium and Limnostrombidium were the most prominent (up to 49.9 and 64.6%, respectively). The picoplankton-feeders (minute oligotrichs, peritrichs and scuticociliates) were found to be an important component even in the oligotrophic environment but this ecological type never dominated within the water column (up to 22.2 and 30.3 %, respectively). Major food sources of gymnostomes, prevailing only in Lochnagar (82.5 and 87.5 %, respectively; Mesodinium sp.), remained unclear; large Askenasia spp. were apparently mixotrophic. Using a cluster analysis, the lakes were grouped according to the total numbers of ciliates and contributions of distinct ecological groups with different feeding patterns. Within low acidic lakes, Lochnagar differed from all others. The rest of the lakes was divided into two subgroups: remote pristine lakes of the Northern transect (the Norwegian lakes and Chuna ozero), and the others, geographically affiliated to the south transect (Pyreneans, Alps, Tatra Mts.). Such a differentiation is in good agreement with the clustering based on chemical parameters reported for the lakes. No marked differences in the ciliate distribution were detected when the above timberline- and forest surrounded mountain lakes were compared.

Elimination of inoculated Vibrio cholerae (≥10 7 cells ml -1 ) within a brackish water bacteria assemblage (Mecoacan Lagoon, State of Tabasco, Mexico) was studied in laboratory microcosms with filtration-fractionated water. Feeding of a ciliate, Cyclidium glaucoma was evaluated using fluorescently labelled V. cholerae O1. Even though V. cholerae was not exploited as the major food source, ciliates were able to eliminate it efficiently. An addition of chitin directly supported the growth of bacteria, although not so much of V. cholerae, and indirectly the growth of the protistan assemblage. Generally, the changes in a bacterial assemblage structure were the most important in V. cholerae elimination.

In aquatic microbial ecology, it has been considered that most extracellular enzymes except phosphatases are of bacterial origin. We tested this paradigm by evaluating the relationship between bacterial cell number and the activity of three glycolytic enzymes from 17 fresh waters and also from a laboratory experiment. Our large sets of pooled data do not seem to support such a simple explanation, because we found only a weak correlation of bacterial number with activity of α-glucosidase (rs = 0.63), β-glucosidase (rs = 0.45), and β-N-acetylhexosaminidase (rs = 0.44). We also tested relations of the enzymatic activities to potential sources of natural substrates: dissolved organic carbon (DOC) and phytoplankton (as chlorophyll a). Their correlations with the enzymatic activities tested were very weak or insignificant. On the other hand, we found evidence for distinct producers of extracellular enzymes by analysing enzyme kinetics. The kinetics usually did not follow the simple Michaelis-Menten model but a more complex one, indicating a mixture of two enzymes with distinct affinity to a substrate. In combination with size fractionation, we could sometimes even distinguish three or more different enzymes. During diatom blooms, the diatom biomass tightly correlated with β-N-acetylhexosaminidase activity (>4 μm fraction). We also documented very tight relationships between activity of both glucosidases and dry weight of Daphnia longispina (rs = 1.0 and 0.60 for α- and β-glucosidases, respectively) in an alpine clear-water lake. Our data and evidence from other studies indicate that extracellular glycosidic activities in aquatic ecosystems cannot generally be assigned only to bacteria. Also invertebrate animals and other eukaryotes (fungi, diatoms, protozoa etc.) should be considered as potentially very important enzyme producers. (© 2004 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim)

The microbial loop of a naturally acidic bog lake, Grosse Fuchskuhle (Northeastern Germany), that had been artificially divided into 4 basins, was investigated. In the northeast (NE) and southwest (SW) basins, which differ strongly in chemistry and primary production, we conducted intensive studies of the main carbon fluxes through microbial food webs. In the less acidic, NE basin, much higher phytoplankton as well as bacterial biomass and production were found in parallel with negligible numbers of larger zooplankters. Weakly top-down controlled populations of protists were characterized by an exceptionally low numerical proportion of heterotrophic nanoflagellates (HNF) to ciliates (-1.5-3.5). The ciliate community was dominated by a scuticociliate, Cyclidium sp. (>95% of total ciliates), with an estimated grazing rate equal to 46-80% of heterotrophic bacterial production. In contrast, in the more humic, SW basin, both phyto- and bacterioplankton dynamics seemed to be top-down controlled by abundant populations of small fine-filter feeding cladocerans, Ceriodaphnia quadrangula and Diaphanosoma brachyurum. Consequently, ciliates disappeared from the food web structure of the SW basin, HNF dropped to negligible numbers and bacteria showed very uniform morphology, dominated by small cocci or short rods. Our investigations have shown that the division of the lake into separate compartments can lead to very different microbial food web structures with extreme species compositions.

Extracellular hydrolysis of 4-methylumbelliferyl β-N-acetylglucosaminide was measured in the oligomesotrophic Piburger See and the eutrophic Rimov reservoir during spring and summer phytoplankton blooms, respectively. Total enzymatic activity (TEA) ranged between 0.2 and 19.1 nmol 1 -1 h -1 in the reservoir and between 0.8 and 12.4 nmol 1 -1 h -1 in the lake. High-affinity (K m 100 μmol 1 -1 ) enzymes were kinetically identifiable in most samples from both localities. The low-affinity enzyme activity (LEA) usually accounted for >60% (mean: 80%) of TEA. LEA and diatom biomass significantly correlated over time in the reservoir epilimnion (r s = 0.578) and in the lake metalimnion (r s = 0.862). As diatoms possess chitin and take up its monomer, N-acetylglucosamine, two explanations of the observed relationships are suggested: extracellular β-N-acetylglucosaminidase activity partly originates either from ectoenzymes of chitinolytic bacteria attached to diatom cells or from ectoenzymes of diatoms, enabling them to take up N-acetylglucosamine from ambient amino sugars instead of synthesizing it de novo. A significant positive correlation of LEA with crustacean abundance was found in the lake epilimnion (r s = 0.850), apparently reflecting the growing spring populations of frequently moulting juvenile crustaceans. A possible contribution of chitinolytic bacteria, accompanying the crustacean populations, to LEA is discussed.

Ciliate picoplanktivory was studied in two different freshwater systems with abundant auto- trophic picoplankton (APP): the eutrophic Rimov Reservoir (South Bohemia) during the late summer of 1993 and the oligo- to mesotrophic lake Piburger See (Tyrol) during May 1994. Picoplankton were sized by an image-analysis system and species-specific grazing rates of ciliates on bacteria and APP were determined using fluorescently labelled prey. According to the grazing data (as the mean uptake rate of picoplankton ind.~' h1), ciliates were split into three ecological groups in order of their decreas- ing picoplanktivory and increasing significance of nanophytoplankton in their diet, (i) Highly efficient fine suspension feeders consisting of vorticellids (4200 bacteria, 560 APP), four oligotrichs and Cyclidium sp. (380-1580 bacteria, 57-210 APP), with 2 u.m. (ii) Less efficient fine suspension feeders, coarse filter feeders and detritophages consisting of Cinetochilum margaritaceum, Pelagostrombidium fallax, Cyrtolophosis mucicola and Coleps spp. (60-173 bacteria, 2-27 APP), with 7-32% of individuals ingesting algae >2 n.m. (iii) Raptorial feeders consisting of four prostomatids belonging to the genera Urotricha and Balanion, with a negligible importance of picoplanktivory (8-61 bacteria, 0.2-14 APP). With the exception of one prostomatid. >58% of individuals ingested algae >2 (j.m. Grazing data for the six species from the first group were converted into organic carbon. Assuming a 35 % gross growth efficiency, the calculated potential doub- ling times were between 29 (Hatteria grandinella) and 43 h (an unidentified oligotrich), except for the mixotrophic Pelagohalteria viridis (118 h). The doubling times estimated from changes in ciliate abun- dance for four out of the six species were very close to the calculated values, indicating that this group of heterotrophic ciliates can meet all of its carbon requirements by feeding exclusively on picoplankton.

In late summer 1993 an intensive study was carried out on protozoan grazing in the epilimnion and metalimnion of the eutrophic Rimov Reservoir in south Bohemia. On average, - 70% of bacterial production was consumed by heterotrophic flagellates and -20% by ciliates. Ciliate numbers increased from 5 to 70 cells ml l over the 5-week study period. Ciliates ~30 pm in size were numerically dominant in both layers and included Halteria grandinella and Strobilidium hexakinetum (Oligotrichida), Cyrtolophosis mucicola (Cyrtolophosida), Cinetochilum margaritaceum (Scuticociliatida), Urotricha spp., and Coleps sp. (Prostomatida). Ciliate species-specific grazing rates on bacteria and picocyanobacteria were determined. The highest individual cell grazing rates, 4,200 bacteria and 560 picocyanobacteria cell-’ h-l, were observed in Vorticella aquadulcis-complex. Oligotrichs ingested on average 360-2,130 bacteria and 76-2 10 picocyanobacteria cell ’ h - I, with H. grandinella (1,560 bacteria cell I h-l), due to its high abundance, as the most important ciliate bacterivore within the system. C. mucicola ingested on average 173 bacteria and 27 cyanobacteria cell- ’ h- l; C. margaritaceum, 57 bacteria and 7 picocyanobacteria cell-’ h--l; and prostomatids, 23-100 bacteria and 2-14 picocyanobacteria cell-’ h- I. Although there was a tight relationship between grazing rates on bacteria and picocyanobacteria (rs = 0.89, n = 12, P < 0.00 I), most of the ciliate species preferred larger picoplankton (i.e. picocyanobacteria), as indicated by their clearance rates. According to our data, several oligotrichous ciliate species and Cyclidium sp. can grow in pelagic conditions and exclusively on picoplankton food at rates of one doubling every 24-75 h.

Bacterial size and morphology are controlled by several factors including predation, viral lysis, UV radiation, and inorganic nutrients. We observed that bacterial biovolume from the hypolimnion of two oligotrophic lakes is larger than that of bacteria living in the layer from surface to 20 m, roughly corresponding to the euphotic/epilimnetic zone. One lake is located in the temperate region at low altitude (Lake Maggiore, Northern Italy) and the other in the tropical region at high altitude (Lake Alchichica, Mexico). The two lakes differ in oxygen, phosphorus and nitrogen concentrations and in the temperature of water column. If we consider the two lakes separately, we risk reducing the explanation of bacterial size variation in the water column to merely regional factors. Comparing the two lakes, can we gather a more general explanation for bacterial biovolume variation. The results showed that small bacteria dominate in the oxygenated, P-limited epilimnetic waters of both lakes, whereas larger cells are more typical of hypolimnetic waters where phosphorus and nitrogen are not limiting. Indeed, temperature per se cannot be invoked as an important factor explaining the different bacterial size in the two zones. Without excluding the top-down control mechanism of bacterial size, our data suggest that the average lower size of bacterial cells in the epilimnion of oligotrophic lakes is controlled by outcompetition over the larger cells at limiting nutrients.

Participation of nitrilotriacetic acid degrading bacterial strain NTA-1 in the continuous-cultivated mixed culture was studied under different conditions including predation pressure of the ciliate Dexiostoma campyla (STOKES, 1886). From the viewpoint of dispersed/flocculated biomass distribution, significant relationships between NTA-1 and total bacteria ratio, and dispersed and total biomass ratio were proved in the systems without high concentrations of ciliates. The ciliate concentrations reaching 104 ml−1 stabilized flocculated biomass growth without directly affecting NTA-1 portion. Using fluorescently labelled NTA-1 bacteria, filter feeding rates of ciliates were evaluated (maximum individual uptake rate upon NTA-1 bacteria as a number of bacteria per ciliate per hour being 120 h−1 and 260 h−1 under ciliate division rate of 0.3 day−1 and 1 day−1, respectively). Biomass balance showed that dispersed NTA-1 bacteria should not serve as the sole feeding source for these free-swimming ciliates. The role of diversity of mixed bacterial diet in ciliate growth and the role of ciliate predation in stabilizing bacterial assemblage structure was proved.

Phagotrophic protists are diverse and abundant in aquatic and terrestrial environments, making them fundamental to the transfer of matter/energy within their respective food webs. Recognising their grazing impact is essential to evaluate the role of protists in ecosystems, and this includes appreciating prey selectivity. Efforts have been made by groups and individuals to understand selective grazing behaviour by protists: many approaches and perspectives have been pursued, not all of which are compatible. This article, which is not a review, is the product of our discourse on this subject at the SAME 10 meeting. It is the work of individuals, assembled for their breadth of backgrounds, approaches, views, and expertise. Firstly, to communicate ideas and approaches, we develop a framework for selective feeding processes and suggest 6 steps: searching, contact, capture, processing, ingestion, digestion. We then separate study approaches into 2 categories: (1) those examining whole organisms at the community, population, and individual levels, and (2) those examining physiology and molecular attributes. Finally, we explore general problems associated with the field of protistan selective feeding (e.g. linking food selection into food webs and modeling). We do not present all views on any one topic, nor do we cover all topics; instead, we offer opinions and suggest avenues for continued study. Overall, this paper should stimulate further discourse on the subject and provide a roadmap for the future.

Ingestion of fluorescent particles by natural protozoan assemblage was studied in the Řimov Reservoir (Southern Bohemia) from April to October, 1987. Attached and free-living bacterial abundance, proportion of active bacteria, density of suspended particles and biomass of cladocerans were also monitored. Heterotrophic nanoflagellates (HNF; 5–12.8 102ml−1) were the dominant bacterial micrograzers during the spring period and consumed 3 to 9% of the total bacteria per day. After the spring phytoplankton bloom maximum densities of suspended particles and attached bacteria (up to 28% of the total counts) were found. Development of cladocerans in May sharply decreased the proportion of attached bacteria and kept them below 5% of the total counts. All the studied components of plankton except Cladocera decreased during the clearwater phase. The most significant drop was observed in the numbers of protozoans, and they were negligible for bacterial elimination. Bacterial losses during that time apparently were due to cladoceran grazing. During the summer period, ciliates (15–142 ml−1) were mostly dominant micrograzers, and protozoan community grazing increased up to 21% of bacterial standing stock per day. The proportion of active bacteria was strongly correlated with protozoan grazing (r=0.83).

Long term analyses of the microbial loop, centred on the picoplankton dynamics, were carried out over a five-year (1998 to 2002) period in Lake Alchichica (Puebla, Mexico), a high altitude tropical athalassohaline lake. The hydrodynamics of the lake followed a warm-monomictic pattern with mixing at a minimum temperature during the early dry season while the stratification was pronounced in the late dry season and throughout the rainy season; anoxic conditions in the hypolimnion lasted

Relationship between bacteria and ciliates was investigated in continuous cultures with and without the recycling of flocculated biomass. Monocultures of ciliates of various ecological types were used together with mixed cultures of bacteria or bacteria and flagellates. The effect of ciliates on the distribution of flocculated and dispersed, biomass was tested with respect to characterizing an optimum mixed culture for activated-sludge treatment. Monoprotozoal populations were not successful in stabilizing the morphology of a bacterial community in a system with recycling of flocculated biomass. Stabilization was observed (with particular ecological types of ciliates) in the system with a high residence time without recycling and/or in the system with the recycling inoculated by both flagellates and ciliates.

A methodical approach for the assessment of pelagic biomass and the main carbon fluxes in remote and hardly accessible mountain lakes was elaborated and tested. Number and biomass of bacteria (BAC), autotrophic picoplankton (APP), heterotrophic nanoflagellates (HNF), ciliates (CIL), phytoplankton (PHY), zooplankton smaller than 40 μm (ZOOS) and zooplankton larger than 40 μm (ZOOL) were investigated regularly during two ice-free periods in 13 European mountain lakes (1st level approach – fixed samples elaborated in specialized laboratories). Carbon fluxes measured in 9 lakes included: primary production, exudation by PHY and BAC uptake of exudates, BAC production, elimination of BAC. These processes were measured in the field by specialized teams (2nd level approach). The ranges of values found in mountain lakes were evaluated and possible methodical and interpretative errors discussed. BAC were a significant component of pelagic biomass. The intercomparison between different partners showed differences in bacterial counts lower than 10%, whereas the mean cell volumes measured fluctuated by more than 40%. APP was never found in a significant quantity, except in one lake. HNF and CIL, though regularly found, were usually scarce and only occasionally significant in terms of biomass. The main components of pelagic biomass were BAC, PHY and ZOOL+ZOOS, except for acidified lakes, where zooplankton was very low. In oligotrophic mountain lakes, the percentage of extracellular production in the total primary production was considerable. Bacterial abundance and production often reached values quite comparable with the situation found in lowland mesotrophic lakes during winter.

We analysed early spring protozooplankton peaks following winter stratification in two different basins (northeast, NE; southwest, SW) of an artificially-divided bog lake Grosse Fuchskuhle (Brandenburg, Germany). The maximum ciliate biomass and numbers (660 and 990 μg l -1 of organic carbon, and 290 and 260 cells ml -1 in NE and SW, respectively) were reached in the surface layer during the ice melting and then continuously decreased. The surface layers were numerically dominated by species of the genus Urotricha, while in the ciliate biomass during the first part of the study, a mixotrophic oligotrich, Pelagostrombidium mirabile prevailed (C org up to 940 μg l -1 ). We observed a conspicuous ciliate peak that could not be related to the feeding activity of the dominant ciliate species upon picoplankton. Seemingly, the peak was related to the specific conditions resulting from the ice melting where these ciliates could be concentrated. Additionally, the mixotrophy of oligotrichous species allowed them to penetrate below the oxycline, although feeding on nanoplankton such as flagellates was also very likely. Our direct measurements of uptake rates of bacteria showed that the abundant strombiduds were not nutritionally dependent on bacterivory. However, the ciliate uptake rate (up to 670 bacteria ciliate -1 h -1 ) contributed significantly to the overall bacteria mortality rate. The maximum (community average) cell-specific ciliate feeding rate of over 200 bacteria ciliates 1 h -1 was reached, along with an increasing contribution of scuticociliates, paralleled by a drop in large oligotrichs.

The in situ growth rates of dominant ciliate species were studied during and shortly after phytoplankton peaks in two water bodies: the eutrophic Ri'mov Reservoir (South Bohemia, Czech Republic) and the oligo-mesotrophic Piburger See (Tyrol, Austria). Growth rate estimates based on changes in ciliate abundances in incubated pre-screened samples (EN) were compared with those derived from the ciliate cell volume and ambient temperatures (£T). The values of EN were always rather lower than those of £T. During the studies, the food supply limited the ciliate growth depending on the ciliate feeding mode. An ecological grouping into filter feeding versus raptorial feeding ('hunt- ing') species, on the one hand, and attached/crawling (browsing) versus free swimming species, on the other hand, clearly affected experimental estimation. Both fine filter feeders (namely attached) and browsers exhibited a calculated £N closer to the theoretical (maximum) £T than did hunters and coarse filter feeders. It was apparent, for example, comparing £N and £T (day1) of the following species: filter feeders Halieria grandinella (£N = 0.42; £T >1.4), Strobilidium hexakinetum (0.34; >1.9), Pelagohalte- ria viridis (0.27; >0.9), Vorticella aquadulcis complex (0.75; >1.0); raptorial Balamon planctonicum (0.65; >1.5), Urotricha furcata (in Ri'mov Reservoir 0.65; >2.1; in Piburger See 0.20; >1.5), Rhab- doaskenasia minima (0.22; >1.0), Askenasia acrostomia (0.12; >0.6); opportunistic Cyrtolophosis mucicola (0.42; >1.6) and Cinetochilum margaritaceum (0.86; >1.4). Predation by rotifers apparently affected measurements in several samples containing —400 rotifers I"1; however, it seemed to be of little importance in the water column.