28 results on '"Geoff R. MacFarlane"'
Search Results
2. The potential of saltmarsh halophytes for phytoremediation of metals and persistent organic pollutants: An Australian perspective
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Rebecca A.L. Roe and Geoff R. MacFarlane
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Persistent Organic Pollutants ,Soil ,Biodegradation, Environmental ,Metals ,Metals, Heavy ,Australia ,Soil Pollutants ,Environmental Pollutants ,Salt-Tolerant Plants ,Aquatic Science ,Oceanography ,Pollution ,Xenobiotics - Abstract
Persistent organic and inorganic pollutants are among the most concerning pollutants in Australian estuaries due to their persistent, ubiquitous, and potentially toxic nature. Traditional methods of soil remediation often fall short of practical implementation due to high monetary investment, environmental disturbance, and potential for re-contamination. Phytoremediation is gaining traction as an alternative, or synergistic mechanism of contaminated soil remediation. Phytoremediation utilises plants and associated rhizospheric microorganisms to stabilise, degrade, transform, or remove xenobiotics from contaminated mediums. Due to their apparent cross-tolerance to salt, metals, and organic contaminants, halophytes have shown promise as phytoremediation species. This review examines the potential of 93 species of Australian saltmarsh halophytes for xenobiotic phytoremediation. Considerations for the practical application of phytoremediation in Australia are discussed, including mechanisms of enhancement, and methods of harvesting and disposal. Knowledge gaps for the implementation of phytoremediation in Australian saline environments are identified, and areas for future research are suggested.
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- 2022
3. Pollution status and ecological risk assessment of metal(loid)s in the sediments of the world's largest mangrove forest: A data synthesis in the Sundarbans
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Sazal, Kumar, Pritom Bhowmik, Akash, Rafiquel, Islam, and Geoff R, MacFarlane
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Aquatic Science ,Oceanography ,Pollution - Abstract
The Sundarbans is the largest single-mass mangrove forest in the world, experiencing environmental and anthropogenic stress from metal(loid) inputs. We undertook a comprehensive assessment of sediment contamination and ecological risks posed by metal(loid)s in the Sundarbans using previously published data. There was a distinct difference in metal(loid) content, pollution level and ecological risk in Bangladeshi and Indian parts of the Sundarbans, with the Indian counterpart experiencing relatively higher metal(loid) pollution. The higher pollution level in India might be attributed to its vicinity to municipal and industrial areas that act the primary source of metal(loid)s in the Sundarbans. The cumulative ecological risks of metal(loid)s pointed out that the south-eastern part of Bangladeshi Sundarbans and north-eastern Indian part are at moderate ecological risk. This research will provide valuable data to inform the responsible authorities and will underpin future policies and management to reduce future metal(loid) inputs in the Sundarbans.
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- 2023
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4. The accumulation and distribution of arsenic species and selected metals in the saltmarsh halophyte, spiny rush (Juncus acutus)
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Md Rushna Alam, Mohammad Mahmudur Rahman, Nora Fung-Yee Tam, Richard Man Kit Yu, and Geoff R. MacFarlane
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Metals, Heavy ,Salt-Tolerant Plants ,Aquatic Science ,Oceanography ,Estuaries ,Pollution ,Arsenic ,Environmental Monitoring - Abstract
This study examined the accumulation of As species, Se, Cu, Zn, Cd and Pb in the halophyte Juncus acutus, collected from three anthropogenically impacted estuaries in NSW, Australia. As concentration ranged from 4 to 22 μg/g at Georges River, 2-16 μg/g at Lake Macquarie and 6 μg/g at Hunter Estuary. Inorganic As was accumulated mainly in roots with low translocation to culm with a greater abundance of AsV. However, AsIII (TF = 0.32) showed greater mobility from the roots to shoots than AsV (TF = 0.04), indicating a higher quantity of AsIII specific transporter assemblages in the plasmalemma of the endodermis or cytoplasmic reduction of AsV to AsIII in culms. Metal(loid)s, including As (90%), were predominantly in root tissues and very limited translocation to culm, indicating the species is a useful phytostabiliser. As and all other metal(loid)s in roots were correlated with sediment loads (p 0.05, R
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- 2021
5. Benthic infaunal assemblages adjacent to an ocean outfall in Australian marine waters: Impact assessment and identification of indicator taxa
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Megan Andrew-Priestley, Katie Newton, Margaret E. Platell, Lisa Le Strange, Harry Houridis, Michael Stat, Richard Man Kit Yu, Craig Evans, Zoe Rogers, Jason Pallot, Jaman Van Den Broek, and Geoff R. MacFarlane
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Geologic Sediments ,Oceans and Seas ,Australia ,Animals ,Humans ,Polychaeta ,Aquatic Science ,Oceanography ,Pollution ,Environmental Monitoring - Abstract
An impact assessment of oceanic effluent releases from Belmont wastewater treatment works (WWTW) in Newcastle, Australia, was undertaken. Benthic infaunal assemblages in sandy sediments of ~25 m water depth were examined, at sites adjacent to the release point, and at increasing distances up to 2 km in both a NE and SW direction over five consecutive years (2016-2020). Localised impacts were evident for infaunal assemblages, with sites within 20 m of the outfall ("Impact" site types) exhibiting lower taxa richness and Shannon diversity, higher abundances of polychaetes and/or nematodes, higher polychaete ratios, and shifts in assemblage composition in comparison to sites at greater distances during some years. Taxa with increased localised abundances at the outfall were identified as indicators for monitoring impacts, including deposit-feeding polychaetes (Families Polygordiidae, Paraonidae and Dorvilleidae) and Phylum Nematoda. Future infaunal monitoring could include molecular tools and paired sediment analyses.
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- 2021
6. Lethal and Sub-Lethal Effects of Aluminium on a Juvenile Penaeid Shrimp
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Barbara F. Nowak, Angela Russell, Matthew D. Taylor, Geoff R. MacFarlane, and Natalie A. Moltschaniwskyj
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0106 biological sciences ,Gill ,Penaeidae ,010604 marine biology & hydrobiology ,Zoology ,04 agricultural and veterinary sciences ,Aquatic Science ,Biology ,Oceanography ,biology.organism_classification ,01 natural sciences ,Acute toxicity ,Shrimp ,Productivity (ecology) ,Bioaccumulation ,040102 fisheries ,Prawn ,0401 agriculture, forestry, and fisheries ,Hepatopancreas - Abstract
Catchment degradation and exposure of acid sulphate soils can affect estuarine water quality, and this can have impacts on the health of estuarine species and adversely affect fishery productivity. In degraded catchments, aluminium (Al) is mobilised from clay minerals following oxidation of acid sulphate soils, and may be harmful to estuarine crustaceans. We tested the acute toxicity and sub-lethal effects of Al for School Prawn (Metapenaeus macleayi), through a series of experiments conducted under normal (pH 8) and acidic (pH 5) conditions. Experimental data were used to examine mortality. Also, histological examination of the gills and hepatopancreas was conducted to determine pathological consequences of exposure to these stressors. School Prawn did not experience mortality in response to acute exposure to Al under normal pH conditions, but mortality and tissue bioaccumulation of Al was greater under acidic conditions, suggesting an interactive effect of both stressors. Histology revealed sub-lethal effects of Al including structural abnormalities in the gills and hepatopancreas, and evidence of viral infection and immune response, particularly at lower pH and higher Al concentrations. These impacts may impede major vital functions such as respiration, osmotic regulation, metabolism and growth of juvenile School Prawn, which could contribute to productivity bottlenecks in degraded estuaries.
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- 2019
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7. Uptake and partitioning of metals in the Australian saltmarsh halophyte, samphire (Sarcocornia quinqueflora)
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Christopher M. McLean, Geoff R. MacFarlane, Richard Man Kit Yu, and Angelica Vårhammar
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0106 biological sciences ,geography ,geography.geographical_feature_category ,biology ,Chemistry ,010604 marine biology & hydrobiology ,Soil organic matter ,Sediment ,Bioconcentration ,Estuary ,Plant Science ,Aquatic Science ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Environmental chemistry ,Salt marsh ,Halophyte ,Sarcocornia quinqueflora ,Bioindicator - Abstract
Little is known regarding potential uptake of metals in Australian saltmarsh flora, thus the current study endeavored to examine patterns of Zn, Cu, Pb and Cd uptake and partitioning in the dominant saltmarsh halophyte, Samphire (Sarcocornia quinqueflora), across three contaminated estuaries in New South Wales, Australia. Average sediment concentrations ranged from 62 to 764 μg/g for Zn, 20–52 μg/g for Cu, 27–311 μg/g for Pb and 0.45–1.90 μg/g for Cd across estuaries. Lake Macquarie was the most contaminated estuary, with the Hunter River estuary and Sydney Olympic Park exhibiting intermediate levels of sediment metal contamination. Bioconcentration factors for metal uptake from sediment to roots were ≥ 1 (except for Cu). Translocation within the plant was low for most metals, with apparent barriers to transport identified at the root: non-photosynthetic stem interface for Zn, Cu, Pb and Cd, and at the non-photosynthetic stem: photosynthetic stem transition for Pb and Cd. All metals accumulated in roots with increasing sediment exposure, and lower soil organic matter predicted greater Pb and Cu uptake to roots. Further, increases in sediment pH predicted greater Cd root accumulation. However, transport was regulated to the non-photosynthetic stem for Zn, and to the PS stem for Zn and Pb. In terms of employing S. quinqueflora as a bioindicator, all root metals, and Pb and Cd in non-photosynthetic stem tissue exhibited relationships with sediment metal loads, though high variability made their predictive ability limited.
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- 2019
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8. Accumulation and distribution of metal(loid)s in the halophytic saltmarsh shrub, Austral seablite, Suaeda australis in New South Wales, Australia
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Thi Kim Anh Tran, Andrea S. Griffin, Taylor J. Stein, Rushna Alam, Mohammad Mahmudur Rahman, Geoff R. MacFarlane, and Richard Man Kit Yu
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0106 biological sciences ,ved/biology.organism_classification_rank.species ,Wetland ,010501 environmental sciences ,Aquatic Science ,Chenopodiaceae ,Oceanography ,01 natural sciences ,Shrub ,Suaeda australis ,Halophyte ,Metals, Heavy ,0105 earth and related environmental sciences ,Metalloids ,geography ,geography.geographical_feature_category ,biology ,ved/biology ,Ecology ,010604 marine biology & hydrobiology ,Australia ,Sediment ,Estuary ,Salt-Tolerant Plants ,biology.organism_classification ,Pollution ,Phytoremediation ,Salt marsh ,Environmental science ,New South Wales ,Environmental Monitoring - Abstract
We examined the patterns of uptake and partitioning of metal(loid)s in Suaeda australis from three highly urbanised estuaries (Sydney Olympic Park, Hunter Wetlands and Lake Macquarie) in NSW, Australia. Of these, Sydney Olympic Park was found to be the most contaminated estuary in terms of combined sediment metal(loid) load, followed by Hunter Wetlands and lowest in Lake Macquarie (via PERMANOVA). Uptake in roots was greater for the essential metals Cu and Zn along with the non-essential metal Cd and the metalloid Se (root BCFs1) and lower for Pb and As (root BCFs1). Substantial barriers for translocation from roots to stems were identified for all metal(loid)s (stem TFs; 0.07-0.68). Conversely, unrestricted flow from stems to leaves was observed for all metal(loid)s at unity or higher (leaf TFs ≥ 1). Strong linear relationships between sediment and root for Zn and Pb were observed, indicating roots as a useful bioindicator.
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- 2021
9. Metal(loid) uptake and partitioning within the saltmarsh halophyte, Juncus kraussii
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Taylor J. Stein, Thi Kim Anh Tran, Geoff R. MacFarlane, and Rushna Alam
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Cadmium ,geography ,geography.geographical_feature_category ,biology ,chemistry.chemical_element ,Juncus kraussii ,Salt-Tolerant Plants ,Estuary ,Wetland ,Aquatic Science ,Oceanography ,biology.organism_classification ,Pollution ,chemistry ,Metals, Heavy ,Wetlands ,Halophyte ,Environmental chemistry ,Salt marsh ,Bioaccumulation ,Soil Pollutants ,Environmental science ,Metalloid ,Estuaries ,Environmental Monitoring - Abstract
An investigation was conducted over three estuaries in SE Australia with a gradient in metal(loid) contamination to assess metal(loid) (Cu, Zn, As, Se, Cd and Pb) accumulation and transport within the halophytic saltmarsh rush, Juncus kraussii. Sydney Olympic Park exhibited the most elevated metal(loid) contamination, followed by Hunter Wetlands and Lake Macquarie. J. kraussii exhibited a strong ability to restrict metal(loid) movement into the root system, with the exception of cadmium (BCFs 1.0) and unrestricted flow from root to culm excepting Se, Cd (TFs 1). Pb and Zn exhibited elevated translocation between roots and culms (TF 4.4 and 7.3, respectively). Despite barriers for uptake into the below-ground tissues, most metal(loid)s were accumulated to the roots with environmental dose (except for Cu and Cd) and linear relationships were present between the root and culm (for As and Se) and the sediment and culm (for As, Se, Cd, and Pb).
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- 2021
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10. Exposure to estrogenic mixtures results in tissue-specific alterations to the metabolome of oysters
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Frederic D.L. Leusch, Wayne A. O'Connor, Rafiquel Islam, Thi Kim Anh Tran, Richard Man Kit Yu, Steven D. Melvin, Megan Andrew-Priestley, and Geoff R. MacFarlane
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Male ,Gill ,medicine.drug_class ,Health, Toxicology and Mutagenesis ,Metabolite ,Citric Acid Cycle ,Cellular homeostasis ,010501 environmental sciences ,Aquatic Science ,01 natural sciences ,03 medical and health sciences ,chemistry.chemical_compound ,Metabolomics ,Testis ,medicine ,Metabolome ,Animals ,Sex Ratio ,030304 developmental biology ,0105 earth and related environmental sciences ,chemistry.chemical_classification ,0303 health sciences ,Body Weight ,Ovary ,Australia ,Estrogens ,Environmental Exposure ,Ostreidae ,Amino acid ,Citric acid cycle ,chemistry ,Biochemistry ,Organ Specificity ,Estrogen ,Female ,Glycolysis ,Water Pollutants, Chemical - Abstract
The current study investigated the effect of environmentally relevant mixtures of estrogens at levels representative of receiving waters on the metabolome of the Sydney rock oyster, Saccostrea glomerata. Oysters were exposed to a "low" and a "high" mixture of (xeno) estrogens (representative of Australian and global receiving waters respectively) for 7 days and digestive gland, gill, and gonad tissue were sampled for quantification of polar metabolites by 1H NMR spectroscopy. Exposure to both mixtures lowered body mass and altered the metabolite profile in the digestive glands. Comparatively, gills, and ovaries demonstrated lesser sensitivity to the mixtures, with significant metabolomic alterations observed only for the high mixture. The male gonad did not respond to either estrogenic exposure. In the responsive tissues, major metabolites including amino acids, carbohydrates, intermediates of the tricarboxylic acid cycle and ATP were all down-regulated and exhibited tissue-specific patterns of down-regulation with the greatest proportion of metabolites down-regulated due to estrogenic exposure in the digestive gland. Exposure to (xeno) estrogen mixtures representative of concentrations reported in receiving waters in Australia and globally can impact the metabolome and associated energy metabolism, especially in the digestive gland, translating to lower pools of available ATP energy for potential cellular homeostasis, somatic maintenance and growth, reproduction and fitness.
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- 2021
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11. Baseline analysis of metal(loid)s on microplastics collected from the Australian shoreline using citizen science
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Geoff R. MacFarlane, Heidi Taylor, Sania Afrose, Maddison Carbery, Wayne A. O'Connor, and Thava Palanisami
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0106 biological sciences ,Microplastics ,Citizen Science ,010604 marine biology & hydrobiology ,Aquatic ecosystem ,Australia ,010501 environmental sciences ,Aquatic Science ,Oceanography ,01 natural sciences ,Pollution ,Metal ,Metals ,visual_art ,Environmental chemistry ,visual_art.visual_art_medium ,Chemical contaminants ,Environmental science ,Plastics ,Water Pollutants, Chemical ,Environmental Monitoring ,0105 earth and related environmental sciences - Abstract
Microplastics are an emerging contaminant in aquatic environments. Information on the occurrence and characteristics of microplastics in Australia is limited and their interactions with chemical contaminants have not been addressed. Therefore, the aim of this study was to generate baseline information on the physical and chemical characteristics of microplastics on Australian shorelines to facilitate further detailed risk assessment. Field collected microplastics were categorised by colour, shape and polymer type. Plastic particles were primarily clear, blue, white and green and consisted mainly of fragments (57.80%) and pellets (30.68%). Polymer characterisation revealed that shoreline microplastics were polyethylene (53.17%), polypropylene (35.17%), polystyrene (6.61%) and polyethylene terephthalate (1.85%). Analysis of metal(loid)s found that concentrations of Mn, Cr, Cu, As, Zn and Pb were significantly higher on microplastics associated with industrial locations compared with other land uses, indicating that aged microplastics have the potential to adsorb toxic metals and that metals levels may be location-dependent.
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- 2020
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12. Characterisation of the metallothionein gene in the Sydney rock oyster and its expression upon metal exposure in oysters with different prior metal exposure histories
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Thanvapon Yingprasertchai, Wayne A. O'Connor, Richard Y.C. Kong, Geoff R. MacFarlane, Richard Man Kit Yu, and Thi Kim Anh Tran
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0106 biological sciences ,Sydney rock oyster ,Polyadenylation ,Gene Expression ,chemistry.chemical_element ,Aquatic Science ,Oceanography ,010603 evolutionary biology ,01 natural sciences ,Acclimatization ,Transcription (biology) ,Animals ,Metallothionein ,Gene ,Cadmium ,biology ,Chemistry ,010604 marine biology & hydrobiology ,Promoter ,Environmental Exposure ,General Medicine ,biology.organism_classification ,Ostreidae ,Pollution ,Molecular biology ,Metals ,Water Pollutants, Chemical - Abstract
The metal-binding protein metallothionein (MT) is widely used as a biomarker of metal contamination. In this study, we cloned a MT gene (sgMT) from the Sydney rock oyster Saccostrea glomerata. The gene encodes a MT-I protein with a classical αβ domain structure and is expressed as two transcripts resulting from alternative polyadenylation. The gene promoter contains two putative metal-responsive elements (MREs) which are known to be required for metal-inducible transcription. A specific and efficient qPCR assay was developed to quantify sgMT mRNA expression. Further, we assessed whether prior metal exposure history influences sgMT mRNA expression upon subsequent metal exposure. Oysters with varying prior metal exposure histories (contaminated and reference) were exposed to Cu, Cd and Zn. Expression of sgMT generally increased with metal dose, and oysters with an elevated past metal exposure history exhibited higher sgMT expression under Cd and Zn stress, representing a potential acclimatory response to prior metal exposure.
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- 2019
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13. Acclimatory processes are likely responsible for metal tolerance in oyster embryos
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Geoff R. MacFarlane, Tegan Hopwood, Richard Man Kit Yu, Thanvapon Yingprasertchai, and Wayne A. O'Connor
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0301 basic medicine ,Oyster ,Offspring ,Zoology ,010501 environmental sciences ,Aquatic Science ,Oceanography ,01 natural sciences ,Acclimatization ,03 medical and health sciences ,biology.animal ,Animals ,Shellfish ,0105 earth and related environmental sciences ,EC50 ,geography ,geography.geographical_feature_category ,biology ,Ecology ,Estuary ,Embryo ,Aquatic animal ,General Medicine ,Pollution ,Adaptation, Physiological ,Ostreidae ,030104 developmental biology ,Metals ,Water Pollutants, Chemical ,Environmental Monitoring - Abstract
We aimed to determine if offspring of oysters from contaminated locations were more tolerant to metals, and whether this tolerance could be attributed to acclimation. Oysters from 10 estuaries were sampled, representing a gradient in metal contamination. Tolerance to metals of the F1 offspring from adults residing in these estuaries was assessed. Then, adults from these estuaries were translocated to a single estuary and their offspring tolerance reassessed. No linear relationship was found between the Cu concentrations of adults and their offspring's tolerance to Cu. A positive linear relationship was found between the Zn concentration of adults and the Zn EC50's of their offspring. Zn tolerance was lost after translocation. Zn EC50 values of offspring from transplanted adults bore no relation to the Zn EC50's of their location of origin. Thus the initial tolerance observed could be attributed to acclimation transferred to the F1 generation.
- Published
- 2016
14. Potential mechanisms underlying estrogen-induced expression of the molluscan estrogen receptor (ER) gene
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Geoff R. MacFarlane, Thi Kim Anh Tran, Richard Y.C. Kong, Wayne A. O'Connor, and Richard Man Kit Yu
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0301 basic medicine ,Health, Toxicology and Mutagenesis ,Molecular Sequence Data ,Estrogen receptor ,Gene Expression ,010501 environmental sciences ,Aquatic Science ,Biology ,Real-Time Polymerase Chain Reaction ,01 natural sciences ,Gene product ,03 medical and health sciences ,Gene expression ,Animals ,Amino Acid Sequence ,RNA, Messenger ,Estrogen binding ,Promoter Regions, Genetic ,Gene ,Transcription factor ,Phylogeny ,0105 earth and related environmental sciences ,Base Sequence ,Estradiol ,Ovary ,Promoter ,Estrogens ,DNA Methylation ,Molecular biology ,Ostreidae ,030104 developmental biology ,Receptors, Estrogen ,Mollusca ,DNA methylation ,Female ,hormones, hormone substitutes, and hormone antagonists ,Water Pollutants, Chemical ,Protein Binding ,Transcription Factors - Abstract
In vertebrates, estrogens and estrogen mimicking chemicals modulate gene expression mainly through a genomic pathway mediated by the estrogen receptors (ERs). Although the existence of an ER orthologue in the mollusc genome has been known for some time, its role in estrogen signalling has yet to be deciphered. This is largely due to its constitutive (ligand-independent) activation and a limited mechanistic understanding of its regulation. To fill this knowledge gap, we cloned and characterised an ER cDNA (sgER) and the 5'-flanking region of the gene from the Sydney rock oyster Saccostrea glomerata. The sgER cDNA is predicted to encode a 477-amino acid protein that contains a DNA-binding domain (DBD) and a ligand-binding domain (LBD) typically conserved among both vertebrate and invertebrate ERs. A comparison of the sgER LBD sequence with those of other ligand-dependent ERs revealed that the sgER LBD is variable at several conserved residues known to be critical for ligand binding and receptor activation. Ligand binding assays using fluorescent-labelled E2 and purified sgER protein confirmed that sgER is devoid of estrogen binding. In silico analysis of the sgER 5'-flanking sequence indicated the presence of three putative estrogen responsive element (ERE) half-sites and several putative sites for ER-interacting transcription factors, suggesting that the sgER promoter may be autoregulated by its own gene product. sgER mRNA is ubiquitously expressed in adult oyster tissues, with the highest expression found in the ovary. Ovarian expression of sgER mRNA was significantly upregulated following in vitro and in vivo exposure to 17β-estradiol (E2). Notably, the activation of sgER expression by E2 in vitro was abolished by the specific ER antagonist ICI 182, 780. To determine whether sgER expression is epigenetically regulated, the in vivo DNA methylation status of the putative proximal promoter in ovarian tissues was assessed using bisulfite genomic sequencing. The results showed that the promoter is predominantly hypomethylated (with 0-3.3% methylcytosines) regardless of sgER mRNA levels. Overall, our investigations suggest that the estrogen responsiveness of sgER is regulated by a novel ligand-dependent receptor, presumably via a non-genomic pathway(s) of estrogen signalling.
- Published
- 2016
15. Estrogen mediated effects in the Sydney rock oyster, Saccostrea glomerata, following field exposures to sewage effluent containing estrogenic compounds and activity
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M.N. Andrew-Priestley, T. Tyler, L. Van Zwieten, Geoff R. MacFarlane, R. H. Dunstan, Anu Kumar, and Wayne A. O'Connor
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Male ,Oyster ,Sydney rock oyster ,Time Factors ,Health, Toxicology and Mutagenesis ,Estrone ,Aquatic Science ,Real-Time Polymerase Chain Reaction ,Gas Chromatography-Mass Spectrometry ,Vitellogenins ,Vitellogenin ,chemistry.chemical_compound ,Animal science ,biology.animal ,Animals ,Sex Ratio ,Gonads ,Effluent ,Chromatography, High Pressure Liquid ,Sewage ,biology ,Outfall ,Gene Expression Regulation, Developmental ,Estrogens ,Environmental Exposure ,Environmental exposure ,biology.organism_classification ,Ostreidae ,chemistry ,Environmental chemistry ,Oocytes ,biology.protein ,Female ,New South Wales ,human activities ,Water Pollutants, Chemical ,Environmental Monitoring - Abstract
The Sydney rock oyster, Saccostrea glomerata, has been demonstrated as a useful biomonitor of estrogenic compounds following laboratory exposures, yet its utility in the assessment of estrogenic exposure and effects under field conditions requires investigation. To achieve this aim, S. glomerata were deployed in Newcastle, Australia in the effluent receiving marine waters of Burwood Beach WWTP (Burwood Beach "near"
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- 2012
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16. An investigation of benthic sediments and macrofauna within pearl farms of Western Australia
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J.E. Jelbart, Geoff R. MacFarlane, and Maria J. Schreider
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Oyster ,biology ,business.industry ,Fauna ,Aquatic Science ,engineering.material ,Bivalvia ,biology.organism_classification ,Fishery ,Oceanography ,Aquaculture ,Benthic zone ,biology.animal ,Pinctada maxima ,engineering ,Eutrophication ,business ,Pearl - Abstract
The pearl oyster (Pinctada maxima) aquaculture industry in the Kimberley region of Western Australia has been established for decades. However, investigation of benthic sediments and macrobenthic communities within pearl farms for this region has not taken place until now. Pearl oysters may have the potential to foul the benthic layer under the farms through the deposition of feces and pseudo-feces from the cultured oysters and fouling organisms, and the fallout of debris from the longlines that suspend the pearl oysters. This organic waste and debris can accumulate in the sediments below the oyster longlines and potentially lead to organic enrichment and even eutrophication. Other aquacultures (such as some finfish and other shellfish) have caused eutrophication of marine sediments and a concurrent change in benthic macrofauna. For two years we sampled the sediments below three P. maxima pearl oyster farms in remote regions of the Kimberley coast. Sediment core samples were taken to measure physico-chemical variables (redox potential, nutrients loads and total organic matter) while grab samples collected the benthic macrofauna (> 1 mm in size). Each farm was compared to four control locations (total = 12 control locations) within the same region. At all three pearl farms there was no indication of eutrophication (nutrient enrichment). We concluded that the variability in benthic physico-chemistry beneath pearl farms was within the bounds of natural variability at reference locations. There were also no consistent differences in the benthic macrofauna assemblages below the pearl oyster farms when compared to control locations. There was considerable natural variability of the benthic macrofauna among all locations, but especially among the reference locations. The reference locations were as different from one another as they were from the farm locations, indicating that the diversity of benthic macrofauna taxa, and their relative abundances within sediments underlying the farms fell within the range of natural variability found at these spatial scales. The importance of robust assessment of potential environmental impact of aquaculture facilities is stressed.
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- 2011
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17. Effects of salinity on competitive interactions between two Juncus species
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Mary Elizabeth Greenwood and Geoff R. MacFarlane
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Biomass (ecology) ,media_common.quotation_subject ,Juncaceae ,Juncus kraussii ,Plant Science ,Interspecific competition ,Aquatic Science ,Biology ,biology.organism_classification ,Competition (biology) ,Salinity ,Aquatic plant ,Botany ,Juncus ,media_common - Abstract
A glasshouse study investigated the effect of salinity on growth and competitive interactions between two closely related rush species, an Australian native ( Juncus kraussii ) and an exotic ( J. acutus ) species. Overall, both species exhibited decreases in height and total biomass with increasing salinity, although tolerance of J. acutus was marginally lower. We observed asymmetric responses at each salinity, due to the presence of the other species. In fresh-water, co-presence of J. kraussii facilitated the growth (increases in height and total biomass) of J. acutus . However, at 10 ppt salinity direct interspecific competition with J. kraussii adversely affected total biomass of J. acutus . When grown with J. acutus , at 5 ppt but not at 10 ppt, salinity reduced total biomass of J. kraussii . We suggest that interspecific interactions vary with salinity, dependant on relative salinity tolerance of each species. It would appear that in areas receiving regular fresh-water inputs, which reduce salinity stress, J. acutus has the potential to displace J. kraussii .
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- 2009
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18. The glutathione antioxidant system as a biomarker suite for the assessment of heavy metal exposure and effect in the grey mangrove, Avicennia marina (Forsk.) Vierh
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Geoff R. MacFarlane, José Cláudio Fonseca Moreira, Fernanda Freitas Caregnato, and Claudia E. Koller
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Geologic Sediments ,Antioxidant ,medicine.medical_treatment ,Aquatic Science ,Oceanography ,Antioxidants ,Metal ,Lipid peroxidation ,chemistry.chemical_compound ,Animal science ,Metals, Heavy ,Botany ,medicine ,chemistry.chemical_classification ,biology ,Verbenaceae ,Glutathione peroxidase ,Australia ,Glutathione ,biology.organism_classification ,Pollution ,Plant Leaves ,Zinc ,chemistry ,Avicennia marina ,visual_art ,visual_art.visual_art_medium ,Biomarker (medicine) ,Avicennia ,Biomarkers ,Water Pollutants, Chemical ,Environmental Monitoring - Abstract
Alterations in the glutathione antioxidant system and lipid peroxidation in Avicennia marina were studied under laboratory and field conditions. The activity of glutathione peroxidase (GPx) was found to respond to Zn exposure, and a significant positive relationship between leaf Zn concentration and GPx activity was observed after 96 h and 8 weeks. Lipid hydroperoxides increased proportionally with increasing leaf Zn concentration after 2 and 8 weeks, while no changes in total glutathione were observed. Induction of GPx at 96 h predicted effects at the individual level at a later time interval (reduced biomass at 8 weeks). Results from the field revealed that increasing leaf metal concentration (Zn, Cu or Pb) produced a proportional increase in GPx activity whereas lipid hydroperoxides and total glutathione were not affected. The utility of GPx as an early warning biomarker is suggested, since GPx activity increases in a dose-dependant fashion in response to accumulated leaf metals, and is predictive of later effects on growth.
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- 2008
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19. Effects of 4-nonylphenol and 17α-ethynylestradiol exposure in the Sydney rock oyster, Saccostrea glomerata: Vitellogenin induction and gonadal development
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B. Nixon, Wayne A. O'Connor, Geoff R. MacFarlane, R. H. Dunstan, M. N. Andrew, and L. Van Zwieten
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Male ,endocrine system ,medicine.medical_specialty ,Gonad ,medicine.drug_class ,Health, Toxicology and Mutagenesis ,Disorders of Sex Development ,Estrogen receptor ,Aquatic Science ,Ethinyl Estradiol ,chemistry.chemical_compound ,Vitellogenin ,Phenols ,Internal medicine ,Ethinylestradiol ,Testis ,medicine ,Animals ,Sex Ratio ,Gonads ,biology ,Ovotestis ,Ovary ,Vitellogenesis ,Ostreidae ,Nonylphenol ,medicine.anatomical_structure ,Endocrinology ,chemistry ,Estrogen ,biology.protein ,Female ,Development of the gonads ,Water Pollutants, Chemical ,medicine.drug - Abstract
Adult Saccostrea glomerata were exposed to environmentally relevant concentrations of 4-nonylphenol (1microg/L and 100microg/L) and 17alpha-ethynylestradiol (5ng/L and 50ng/L) in seawater over 8 weeks. Exposures were performed to assess effects on vitellogenin induction and gonadal development during reproductive conditioning. Chronic direct estrogenicity within gonadal tissue was assessed via an estrogen receptor-mediated, chemical-activated luciferase reporter gene-expression assay (ER-CALUX). Estradiol equivalents (EEQ) were greatest in the 100microg/L 4-nonylphenol exposure (28.7+/-2.3ng/g tissue EEQ) while 17alpha-ethynylestradiol at concentrations of 50ng/L were 2.2+/-1.5ng/g tissue EEQ. Results suggest 4-nonylphenol may be accumulated in tissue and is partly resistant to biotransformation; maintaining its potential for chronic estrogenic action, while 17alpha-ethynylestradiol, although exhibiting greater estrogenic potency on biological endpoints possibly exerts its estrogenic action before being rapidly metabolised and/or excreted. A novel methodology was developed to assess vitellogenin using high-performance liquid chromatography (HPLC). Exposure to both 17alpha-ethynylestradiol (50ng/L) and 4-nonylphenol (100microg/L) produced increases in vitellogenin for females, whereas males exhibited increases in vitellogenin when exposed to 50ng/L 17alpha-ethynylestradiol only. Females exhibited greater vitellogenin responses than males at 50ng/L 17alpha-ethynylestradiol only. Histological examination of gonads revealed a number of individuals exhibiting intersex (ovotestis) in 50ng/L 17alpha-ethynylestradiol exposures. Male individuals in 1microg/L and 100microg/L 4-nonylphenol exposures and 5ng/L 17alpha-ethynylestradiol were at earlier stages of spermatogenic development than corresponding controls.
- Published
- 2008
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20. EFFECT OF THE POLLUTANTS LEAD, ZINC, HEXADECANE AND OCTOCOSANE ON TOTAL GROWTH AND SHELL GROWTH IN THE AKOYA PEARL OYSTER, PINCTADA IMBRICATA
- Author
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S. Gifford, R. Hugh Dunstan, Wayne A. O'Connor, and Geoff R. MacFarlane
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Pollution ,Pollutant ,Oyster ,business.industry ,media_common.quotation_subject ,fungi ,food and beverages ,chemistry.chemical_element ,Zinc ,Aquatic Science ,engineering.material ,Biology ,Hexadecane ,biology.organism_classification ,Fishery ,chemistry.chemical_compound ,chemistry ,Aquaculture ,Environmental chemistry ,biology.animal ,engineering ,business ,Pearl ,media_common ,Pinctada - Abstract
Pearl oysters (Pinctada imbricata) were held in the laboratory and exposed to various levels of the heavy metals lead and zinc and the aliphatic hydrocarbons hexadecane and octacosane for 2 months. Individual oysters were followed over the course of the experiment, allowing specific calculation of total oyster growth (wet weight) and shell growth. Significant reductions in total oyster growth were observed when oysters were exposed to high concentrations (270μg L−1) of either zinc or lead. Exposure to the aliphatic hydrocarbons had no effect on total oyster growth. High concentrations of lead completely halted shell growth, the first demonstration of pollutant induced cessation of biomineralization in pearl oysters. Conversely, exposure to moderate levels of lead and the long-chain hydrocarbon octacosane resulted in significant increases in shell width growth. The results from this study indicate that P. imbricata is relatively tolerant of the selected pollutants and could be deployed within a re...
- Published
- 2006
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21. Photosynthetic Pigments and Peroxidase Activity as Indicators of Heavy Metal Stress in the Grey Mangrove, Avicennia marina (Forsk.) Vierh
- Author
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M.D. Burchett and Geoff R. MacFarlane
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Chlorophyll ,Chlorophyll b ,Geologic Sediments ,Chlorophyll a ,Photosynthetic pigment ,Aquatic Science ,Oceanography ,Photosynthesis ,Trees ,chemistry.chemical_compound ,Metals, Heavy ,Botany ,Humans ,Seawater ,Carotenoid ,Peroxidase ,chemistry.chemical_classification ,biology ,biology.organism_classification ,Carotenoids ,Pollution ,Plant Leaves ,chemistry ,Avicennia marina ,Environmental chemistry ,biology.protein ,New South Wales ,Water Pollutants, Chemical ,Environmental Monitoring - Abstract
Mangroves have been observed to possess a tolerance to high levels of heavy metals, yet accumulated metals may induce subcellular biochemical changes, which can impact on processes at the organism level. Six month-old seedlings of the grey mangrove, Avicennia marina (Forsk.) Vierh, were exposed to a range of Cu (0-800 micrograms/g), Pb (0-800 micrograms/g) and Zn (0-1000 micrograms/g) concentrations in sediments under laboratory conditions, to determine leaf tissue metal accumulation patterns, effects on photosynthetic pigments (chlorophyll a, chlorophyll b and carotenoids), and the activity of the antioxidant enzyme peroxidase. Limited Cu uptake to leaves was observed at low sediment Cu levels, with saturation and visible toxicity to Cu at sediment levels greater than 400 micrograms/g. Leaf Pb concentrations remained low over a range of Pb sediment concentrations, up to 400 micrograms/g Pb, above which it appeared that unrestricted transport of Pb occurred, although no visible signs of Pb toxicity were observed. Zn was accumulated linearly with sediment zinc concentration, and visible toxicity occurring at the highest concentration, 1000 micrograms/g Zn. Significant increases in peroxidase activity and decreases in photopigments were found with Cu and Zn at concentrations lower than those inducing visible toxicity. Significant increases in peroxidase activity only, were found when plants were exposed to Pb. Positive linear relationships between peroxidase activity and leaf tissue metal concentrations were found for all metals. Significant linear decreases in photosynthetic pigments with increasing leaf tissue metal concentrations were observed with Cu and Zn only. Photosynthetic pigments and peroxidase activity may be applicable as sensitive biological indicators of Cu and Zn stress, and peroxidase activity for Pb stress in A. marina.
- Published
- 2001
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22. The Semaphore crab, Heloecius cordiformis: bio-indication potential for heavy metals in estuarine systems
- Author
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Geoff R. MacFarlane, David J. Booth, and K.R Brown
- Subjects
education.field_of_study ,geography ,geography.geographical_feature_category ,biology ,Ecology ,Health, Toxicology and Mutagenesis ,Population ,Sediment ,Estuary ,Aquatic Science ,Heloecius ,biology.organism_classification ,Crustacean ,Sexual dimorphism ,Hepatopancreas ,Carapace ,education - Abstract
Although alterations at the organism level in decapod crustaceans on exposure to heavy metals have been evidenced in the laboratory, little examination of metal effects on morphology and population parameters have been explored in a field-based situation. Relationships between morphological parameters, population demography and heavy metal sediment loadings were examined in conjunction with the accumulation of metals in the Semaphore crab, Heloecius cordiformis, in the Port Jackson and Hawkesbury River estuaries, Sydney, Australia. H. cordiformis exhibited sexual dimorphism, with males having larger carapace width, carapace length, chelae length and total mass than females. Sexes were subsequently treated separately to assess morphological differences among locations. Locations that had greater proportions of females with purple chelae and less females in the population tended to have higher sediment metal levels. These relationships were maintained over time, and could be employed as population-level biological indicators of heavy metal stress. Copper and zinc were regulated in the hepatopancreas of H. cordiformis. Lead was accumulated in the hepatopancreas of H. cordiformis in proportion to sediment lead levels, suggesting the species is both an appropriate candidate for bio-indication of lead pollution, and Pb is the main metal linked with population level differences. Accumulation of lead varied between sexes, indicating that sexes must be monitored separately. Smaller males accumulated more lead than larger males, suggesting size is an important consideration for lead accumulation.
- Published
- 2000
- Full Text
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23. Cellular distribution of copper, lead and zinc in the grey mangrove, Avicennia marina (Forsk.) Vierh
- Author
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Geoff R. MacFarlane and M.D. Burchett
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Salt gland ,Xylem ,chemistry.chemical_element ,Plant Science ,Zinc ,Aquatic Science ,Biology ,biology.organism_classification ,Trichome ,Metal ,chemistry ,Avicennia marina ,visual_art ,Stele ,Botany ,visual_art.visual_art_medium ,Casparian strip - Abstract
The distribution and excretion of Cu, Pb and Zn in the root and leaf tissue of the grey mangrove, Avicennia marina was studied using scanning electron microscope (SEM) X-ray microanalysis and atomic absorption spectroscopy. SEM X-ray microanalysis of nutritive root tissue in seedlings dosed with 4 g/l Cu, Pb and Zn revealed accumulation of all metals predominantly in cell walls. The root epidermis provided a major barrier to the transport of Pb only. The endodermal casparian strip was shown to provide a barrier to movement of all three metals into the stele. Washings from mature leaves contained significantly higher amounts of Zn and Cu than control plants after 1 month, suggesting excretion of both metals from the glandular trichomes. In addition, salt crystals exuded from the glands on the adaxial surface of mature leaves were composed of alkaline metals: Zn in Zn-treated plants, and Cu in Cu-treated plants. Leaf tissue in seedlings dosed with 4 g/l Zn showed a decreasing gradient of the metal from xylem tissue, through photosynthetic mesophyll, to hypodermal (water) tissue, with a subsequent increase in concentration in the glandular tissue. A similar gradient was observed across leaf tissue in seedlings dosed with 4 g/l Cu, however, there was no subsequent increase in Cu concentration in glandular tissue. For both metals leaf cell wall metal concentrations were consistently higher than intracellular concentrations.
- Published
- 2000
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24. Rehabilitation of Saline Wetland, Olympics 2000 Site, Sydney (Australia)—II: Saltmarsh Transplantation Trials and Application
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Alex Pulkownik, Geoff R. MacFarlane, C Allen, and M.D. Burchett
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geography ,geography.geographical_feature_category ,Rehabilitation ,Ecology ,medicine.medical_treatment ,Wetland ,Aquatic Science ,Oceanography ,Pollution ,Transplantation ,Colonisation ,Salt marsh ,Redevelopment ,medicine ,Ecosystem ,Mangrove - Abstract
The New South Wales Olympic Co-ordination Authority, which is responsible for the redevelopment of the site for the Olympic Games 2000, Sydney, is committed to the rehabilitation of the remnant ecosystems remaining on the site. This paper describes a 3-year saltmarsh transplantation project, and resulting management approaches for the rehabilitation of other saline wetland areas on the site. Two series of cuttings (spring and autumn) were made, including three dominant species and three species rare in Sydney. It was found that all the species could be propagated without difficulty, but field survival and growth were much higher for the spring series than the autumn one. Measurement was also made of the colonisation of mangrove and saltmarsh species that occurred at the site over the course of the trials. New understandings of estuarine wetland colonisation have emerged, and the information has been used to develop methods of transplantation for other parts of the Olympic site, and to define management needs for monitoring success.
- Published
- 1999
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25. Rehabilitation of Saline Wetlands, Olympics 2000 Site, Sydney (Australia)—I: Management Strategies Based on Ecological Needs Assessment
- Author
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Geoff R. MacFarlane, M.D. Burchett, C. Grant, and Alex Pulkownik
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geography ,geography.geographical_feature_category ,Ecology ,Biodiversity ,Estuary ,Wetland ,Aquatic Science ,Oceanography ,Pollution ,Disturbance (ecology) ,Redevelopment ,Salt marsh ,Ecosystem ,Wildlife conservation - Abstract
The Homebush Bay area, Sydney, site of the Olympic Games 2000, has been largely occupied for nearly a century by an abattoir, brickworks, armaments depot and waste dumps. However, it contains remnants of original ecosystems, including two estuarine wetlands, and the Olympic Co-ordination Authority (OCA), set up to manage the redevelopment of the site, is committed to the rehabilitation of these ecosystems. The ecological approaches and rehabilitation measures used for one of the wetlands are detailed. Apart from a history of disturbance, it has for 10 years been without tidal flushing. However, these wetlands are the largest remaining in the Sydney estuary, and are significant for a number of reasons including biodiversity and waterbird conservation. The ecological parameters of the site, the results of a `before-restoration-impact' study, and the iterative links between science and management in the introduction of the rehabilitation measures, are presented. Criteria for success are discussed, along with biomonitoring strategies to test success.
- Published
- 1999
- Full Text
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26. Quantification of in situ nutrient and heavy metal remediation by a small pearl oyster (Pinctada imbricata) farm at Port Stephens, Australia
- Author
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Wayne A. O'Connor, H Dunstan, Geoff R. MacFarlane, and S. Gifford
- Subjects
Oyster ,Environmental remediation ,Nitrogen ,Aquatic Science ,engineering.material ,Oceanography ,Phosphorus metabolism ,Aquaculture ,biology.animal ,Metals, Heavy ,Animals ,Nitrogen cycle ,biology ,business.industry ,Environmental engineering ,Phosphorus ,biology.organism_classification ,Pollution ,Ostreidae ,Fishery ,Biodegradation, Environmental ,engineering ,Environmental science ,New South Wales ,Eutrophication ,business ,Pearl ,Water Pollutants, Chemical ,Pinctada - Abstract
The use of pearl oysters has recently been proposed as an environmental remediation tool in coastal ecosystems. This study quantified the nitrogen, phosphorus and heavy metal content of the tissue and shell of pearl oysters harvested from a small pearl oyster farm at Port Stephens, Australia. Each tonne of pearl oyster material harvested resulted in approximately 703 g metals, 7452 g nitrogen, and 545 g phosphorus being removed from the waters of Port Stephens. Increasing current farm production of 9.8 tyr(-1) to 499 tyr(-1) would balance current nitrogen loads entering Port Stephens from a small Sewage Treatment Plant (STP) located on its southern shores. Furthermore, manipulation of harvest dates to coincide with oyster condition would likely remove substantially greater quantities of nutrients. This study demonstrates that pearl aquaculture may be used to assist in the removal of pollutants from coastal waters while producing a commercially profitable commodity.
- Published
- 2005
27. Toxicity, growth and accumulation relationships of copper, lead and zinc in the grey mangrove Avicennia marina (Forsk.) Vierh
- Author
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M.D. Burchett and Geoff R. MacFarlane
- Subjects
Geologic Sediments ,chemistry.chemical_element ,Germination ,Zinc ,Aquatic Science ,Biology ,Oceanography ,medicine.disease_cause ,Plant Roots ,Lethal Dose 50 ,Acanthaceae ,Botany ,medicine ,Tissue Distribution ,Biomass ,Copper toxicity ,Sediment ,General Medicine ,Environmental exposure ,Environmental Exposure ,medicine.disease ,biology.organism_classification ,Pollution ,Plant Leaves ,Horticulture ,chemistry ,Lead ,Seedling ,Avicennia marina ,Zinc toxicity ,Seeds ,Copper - Abstract
The effects of three heavy metals Copper (Cu), lead (Pb) and zinc (Zn), and the interaction of an essential (Zn) and non-essential (Pb) metal on germination, growth, and accumulation of metals in the grey mangrove, Avicennia marina (Forsk.) Vierh var. australasica (Walp.) Moldenke, were studied under laboratory conditions. Avicennia marina was found to be highly tolerant to the metals applied. Copper was accumulated in root tissue in a linear relationship at lower sediment concentrations, but at concentrations of 200 microg/g and higher, no further increases in root Cu levels occurred. Translocation of Cu from the root to leaf tissue was low, yet revealed similar accumulation patterns as root tissue. Significant reductions in seedling height leaf number and area were found with significant increases in Cu concentrations in tissues at 100 microg/g sediment Cu. At Cu sediment levels of 400 microg/g, a decrease in total biomass and root growth inhibition was observed. Emergence was retarded with increasing copper concentration, with 800 microg/g sediment Cu resulting in a total inhibition of emergence. The LC50 for emergence and EC50 for biomass was 566 and 380 microg/g Cu respectively. Lead accumulation in root tissue was lower that other metals, yet increased in a dose dependant fashion across the sediment Pb concentration range examined. Lead was excluded from leaf tissue at Pb sediment concentrations up to 400 microg/g, above which limited transport of Pb occurred. Little negative effects on growth were observed due to the low accumulation of Pb. Zinc uptake was high, and was accumulated in a linear fashion in root tissue across the sediment Zn concentration range applied. Zinc translocation to leaf tissue exhibited a dose dependant relationship with both root and sediment Zn levels. Emergence decreased with increasing sediment Zn concentrations, with 1000 microg/g sediment Zn showing 100% mortality. Significant reductions in seedling height, leaf number, area, biomass and root growth inhibition were found at concentrations of 500 microg/g sediment Zn. The LC50 for emergence and EC50 for biomass was 580 and 392 microg/g Zn respectively. Lead and Zn in combination resulted in an increased accumulation of both metals in leaf tissue and increased toxicity than individual metals alone, and is the first noted occurrence of a Pb and Zn additive response in angiosperms. Possible mechanisms of accumulation and toxicity are discussed.
- Published
- 2002
28. Response of estuarine wetlands to reinstatement of tidal flows
- Author
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Geoff R. MacFarlane, A. Howe, Neil Saintilan, José F. Rodríguez, and Jennifer Spencer
- Subjects
Hydrology ,geography ,geography.geographical_feature_category ,Tidal range ,Ecology ,Water flow ,Estuary ,Wetland ,Vegetation ,Aquatic Science ,Oceanography ,Habitat ,Salt marsh ,Mangrove ,Ecology, Evolution, Behavior and Systematics - Abstract
The importance of estuarine wetlands to ecosystem services such as primary productivity and flood attenuation, as well as their function as habitat for threatened species has prompted efforts to restore tidal flows to degraded wetlands. We tracked the response of estuarine vegetation to tidal-flow reinstatement over 12 years (1995–2007) in a wetland of the Hunter estuary, Australia. This site provides important habitat for migratory shorebird species, which favour shallow tidal pools and saltmarsh over mangrove forest. Increased tidal flows following culvert removal reduced shorebird roost habitat by 17% because of mangrove encroachment on saltmarsh and shallow tidal pools. Saltmarsh occurred in areas with a spring tidal range 0.4 above the Australian height datum (mAHD), whereas mangrove occupied areas with spring tidal range >0.3 m, hydroperiod
- Published
- 2010
- Full Text
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