1. Cross-reactive immunogenicity of group A streptococcal vaccines designed using a recurrent neural network to identify conserved M protein linear epitopes
- Author
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James B. Dale, Jeremy C. Smith, Michelle P. Aranha, Rupesh Agarwal, Jerome Baudry, Sanaz Salehi, Tom A. Penfound, Lauren E. Wade, and Jay A. Spencer
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Streptococcus pyogenes ,Myeloma protein ,030231 tropical medicine ,Heterologous ,Biology ,Article ,Epitope ,law.invention ,Epitopes ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,Bacterial Proteins ,Streptococcal Vaccines ,law ,Animals ,030212 general & internal medicine ,Antigens, Bacterial ,General Veterinary ,General Immunology and Microbiology ,Immunogenicity ,Public Health, Environmental and Occupational Health ,Antibodies, Bacterial ,Virology ,Infectious Diseases ,biology.protein ,Recombinant DNA ,Molecular Medicine ,Neural Networks, Computer ,Rabbits ,Antibody ,Carrier Proteins ,Bacterial Outer Membrane Proteins - Abstract
The M protein of group A streptococci (Strep A) is a major virulence determinant and protective antigen. The N-terminal sequence of the protein defines the more than 200 M types of Strep A and also contains epitopes that elicit opsonic antibodies, some of which cross-react with heterologous M types. Current efforts to develop broadly protective M protein-based vaccines are directed at identifying potential cross-protective epitopes located in the N-terminal regions of cluster-related M proteins for use as vaccine antigens. In this study, we have used a comprehensive approach using the recurrent neural network ABCpred and IEDB epitope conservancy analysis tools to predict 16 residue linear B-cell epitopes from 117 clinically relevant M types of Strep A (~88% of global Strep A infections). To examine the immunogenicity of these epitope-based vaccines, nine peptides that together shared ≥60% sequence identity with 37 heterologous M proteins were incorporated into two recombinant hybrid protein vaccines, in which the epitopes were repeated 2 or 3 times, respectively. The combined immune responses of immunized rabbits showed that the vaccines elicited significant levels of antibodies against all nine vaccine epitopes present in homologous N-terminal 1–50 amino acid synthetic M peptides, as well as cross-reactive antibodies against 16 of 37 heterologous M peptides predicted to contain similar epitopes. The epitope-specificity of the cross-reactive antibodies was confirmed by ELISA inhibition assays and functional opsonic activity was assayed in HL-60-based bactericidal assays. The results provide important information for the future design of broadly protective M protein-based Strep A vaccines.
- Published
- 2021
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