1. Morphological and genomic characterisation of the Schistosoma hybrid infecting humans in Europe reveals admixture between Schistosoma haematobium and Schistosoma bovis
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Julien Kincaid-Smith, Alan Tracey, Ronaldo de Carvalho Augusto, Ingo Bulla, Nancy Holroyd, Anne Rognon, Olivier Rey, Cristian Chaparro, Ana Oleaga, Santiago Mas-Coma, Jean-François Allienne, Christoph Grunau, Matthew Berriman, Jérôme Boissier, Eve Toulza, Interactions Hôtes-Pathogènes-Environnements (IHPE), Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Université de Perpignan Via Domitia (UPVD), Centre de Biologie pour la Gestion des Populations (UMR CBGP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Wellcome Trust Sanger Institute, Wellcome Genome Campus, Hinxton, UK., Universität Greifswald - University of Greifswald, Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology [Zürich] (ETH Zürich), Parasitology Laboratory, Instituto de Recursos Naturales y Agrobiología de Salamanca (IRNASA, CSIC), Universitat de València (UV), Departamento de Parasitologia, Universitat de València (UV)-Facultad de farmacia, CG and RA were supported by the Wellcome Trust [grant number 107475/Z/15/Z], and Deutsche Forschungsgemeinschaft Fellowship BU 2685/5-1. MB was supported by the Wellcome Trust [grant number 098051]. SMC was funded by Health Research Project No. PI16/00520, Plan Estatal de Investigacion Cientifica y Tecnica y de Innovacion, ISCIII-MINECO, Madrid, Spain, Red de Investigacion de Centros de Enfermedades Tropicales - RICET (Project No. RD16/0027/0023 of the PN de I+D+I, ISCIII-RETICS), Ministry of Health and Consumption, Madrid, Spain. JB, ET, OR were funded by the French National Research Agency ANR project HySWARM ANR-18-CE35-0001., ANR-18-CE35-0001,HySWARM,Hybrid Swarm: rôle de l'hybridation dans les capacités invasives, l'épidémiologie et le diagnostic de la schistosomiase(2018), Ministerio de Economía y Competitividad (España), Oleaga, Ana, Université de Perpignan Via Domitia (UPVD)-Institut Français de Recherche pour l'Exploitation de la Mer (IFREMER)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), and Oleaga, Ana [0000-0002-8019-7354]
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Male ,Physiology ,Introgression ,Eggs ,RC955-962 ,Snails ,Disease Vectors ,0302 clinical medicine ,Medical Conditions ,Reproductive Physiology ,Arctic medicine. Tropical medicine ,Invertebrate Genomics ,Medicine and Health Sciences ,Body Size ,Schistosomiasis ,0303 health sciences ,[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE] ,Eukaryota ,Genomics ,3. Good health ,Europe ,Infectious Diseases ,Schistosoma bovis ,Schistosoma haematobium ,Schistosoma ,Female ,Public aspects of medicine ,RA1-1270 ,Schistosomes ,Research Article ,Evolutionary Processes ,Bulinus ,030231 tropical medicine ,03 medical and health sciences ,Helminths ,Parasitic disease ,parasitic diseases ,Genetics ,Parasitic Diseases ,Animals ,Humans ,[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/Parasitology ,030304 developmental biology ,Evolutionary Biology ,Genome, Helminth ,[SDV.GEN]Life Sciences [q-bio]/Genetics ,Chimera ,Public Health, Environmental and Occupational Health ,Organisms ,Biology and Life Sciences ,Paleontology ,Invertebrates ,Animal Genomics ,Earth Sciences ,Hybridization, Genetic ,Paleogenetics ,Zoology - Abstract
Schistosomes cause schistosomiasis, the world’s second most important parasitic disease after malaria in terms of public health and social-economic impacts. A peculiar feature of these dioecious parasites is their ability to produce viable and fertile hybrid offspring. Originally only present in the tropics, schistosomiasis is now also endemic in southern Europe. Based on the analysis of two genetic markers the European schistosomes had previously been identified as hybrids between the livestock- and the human-infective species Schistosoma bovis and Schistosoma haematobium, respectively. Here, using PacBio long-read sequencing technology we performed genome assembly improvement and annotation of S. bovis, one of the parental species for which no satisfactory genome assembly was available. We then describe the whole genome introgression levels of the hybrid schistosomes, their morphometric parameters (eggs and adult worms) and their compatibility with two European snail strains used as vectors (Bulinus truncatus and Planorbarius metidjensis). Schistosome-snail compatibility is a key parameter for the parasites life cycle progression, and thus the capability of the parasite to establish in a given area. Our results show that this Schistosoma hybrid is strongly introgressed genetically, composed of 77% S. haematobium and 23% S. bovis origin. This genomic admixture suggests an ancient hybridization event and subsequent backcrosses with the human-specific species, S. haematobium, before its introduction in Corsica. We also show that egg morphology (commonly used as a species diagnostic) does not allow for accurate hybrid identification while genetic tests do., PLoS Neglected Tropical Diseases, 15 (12), ISSN:1935-2727, ISSN:1935-2735
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- 2021
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