1. Comparative metatranscriptomic analysis of anaerobic digesters treating anionic surfactant contaminated wastewater
- Author
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Valentin Loux, Théodore Bouchez, Mahendra Mariadassou, T. Z. Macedo, Valéria Maia de Oliveira, Gileno V. Jr Lacerda, Cédric Midoux, Maria Bernadete Amâncio Varesche, Ariane Bize, Olivier Rué, Tiago Palladino Delforno, Microbial Resources Division, Research Center for Chemistry, Biology and Agriculture (CPQBA), Universidade Estadual de Campinas (UNICAMP), Laboratory of Biological Processes, Department of Hydraulics and Sanitation, Engineering School of São Carlos, University of São Paulo, Mathématiques et Informatique Appliquées du Génome à l'Environnement [Jouy-En-Josas] (MaIAGE), Institut National de la Recherche Agronomique (INRA), Hydrosystèmes et Bioprocédés (UR HBAN), Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA), and Hydrosystèmes et bioprocédés (UR HBAN)
- Subjects
Environmental Engineering ,food.ingredient ,010504 meteorology & atmospheric sciences ,[SDV]Life Sciences [q-bio] ,Wastewater ,010501 environmental sciences ,Laundry wastewater ,Waste Disposal, Fluid ,01 natural sciences ,Surface-Active Agents ,Desulfomonile ,Bioreactors ,food ,Environmental Chemistry ,Upflow anaerobic sludge blanket ,LAVANDERIA ,Food science ,Waste Management and Disposal ,0105 earth and related environmental sciences ,metatranscriptomics ,Bacteria ,biology ,Chemistry ,Linear alkylbenzene sulphonate ,Biodegradation ,Fumarate reductase ,Acinetobacter ,biology.organism_classification ,Pollution ,Desulfovibrio ,6. Clean water ,Anaerobic digestion ,Biodegradation, Environmental ,Anaerobic pathway ,Alkanesulfonic Acids ,Transcriptome ,Anaerobic exercise ,Water Pollutants, Chemical - Abstract
Three distinct biological reactors fed with synthetic medium (UASB_Control), synthetic medium and linear alkylbenzene sulfonate (LAS; UASB_SL), and real laundry wastewater (UASB_LW) were compared using a metatranscriptomic approach to determine putative bioindicator genes and taxonomies associated to all steps of anaerobic LAS biodegradation pathway. A homemade bioinformatics pipeline combined with an R workflow was developed to perform the RNAseq data analysis. UASB_SL and UASB_LW showed similar values of LAS biological degradation (~47%) and removal (53-55%). Rarefaction analysis revealed that 1-2 million reads were sufficient to access the whole functional capacity. In the first step of LAS biodegradation pathway, fumarate reductase subunit C was detected and taxonomically assigned to the genus Syntrophobacter (0.002% - UASB_SL; 0.0015% - UASB_LW; not detected - UASB_Control). In the second step, many enzymes related to beta-oxidation were observed and most of them with low relative abundance in UASB Control and taxonomically related with Smithella, Acinetobacter and Syntrophorhabdus. For the ring cleavage step, the abundance of 6 OCH CoA hydrolase putative gene was ten times higher in UASB_SL and UASB_LW when compared to UASB_Control, and assigned to Desulfomonile and Syntrophorhabdus. Finally, the adenylylsulfate reductase, taxonomically related with Desulfovibrio and Desulfomonile, was observed in the desulfonation step with the highest relative abundance in UASB_LW.
- Published
- 2019