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The heavy metals were studied in water, sediments, algae, and various tissues of Glyptosternon reticulatum and Cyprinus carpio from River Swat, Pakistan, using flame atomic absorption spectrophotometer. The Zn, Cu, Pb and Ni were higher in water at sewage site compared to upstream and downstream sites. In sediments, the Ni and Cd were not detected whereas Cu, Pb and Zn were higher at downstream followed by sewage and upstream sites. The Ni and Zn in algae were higher at upstream and sewage sites compared to downstream site whereas Pb and Cd were higher at upstream site compared to sewage and downstream sites and Cu was found same at all the three sites. The heavy metals (Zn > Cu > Pb and Ni) in tissues (liver > gills > skin > muscles) of G. reticulatum was higher than in C. carpio. This study recommends the proper monitoring of River Swat in order to save its water and inhabitant aquatic life. [ABSTRACT FROM AUTHOR]

Human activities have disrupted the functioning of river ecosystems around the world. In the Amazon basin, hydropower expansion has affected diversity patterns, but no study has investigated how phytoplankton assemblages respond to impoundments. This study investigated the hypothesis that phytoplankton diversity is highly sensitive to river damming in large tropical rivers, declining in impoundment areas. We examined patterns of taxonomic diversity (i.e., richness, biovolume, and composition), functional diversity (Reynolds Functional Groups, RFGs), and functional redundancy (i.e., number of taxa in each RFG) along the Tocantins River, before and after the construction of Estreito Hydropower Dam. We monitored five sites along the river (ca. 260 km) between December 2009 and May 2013. The dam changed environmental conditions related to flow, nutrient supply, and depth. We recorded 140 taxa and 26 RFGs in the area. Taxa richness, biovolume, and the number of RFGs declined significantly after river regulation. Composition and abundance ranks changed over periods, and the codons C, Y, TC, W1, and LO were eliminated; functional redundancy declined significantly. These results show that phytoplankton diversity is sensitive to river regulation in large tropical rivers, where changes in hydrology and environmental filters lead to significant losses in taxonomic and functional diversity. [ABSTRACT FROM AUTHOR]

We assessed the relative influence of ecoregional features in explaining diatom distribution in the Orinoco river basin. Ecoregions in the Colombian Orinoco can be seen as imprints of the evolutionary history of the basin, for their current biodiversity and physiographic features are the result of the geological and climatic shifts that have occurred since the Tertiary. Thus, they represent an ideal testing ground for studying the interplay between ecological and evolutionary processes shaping diversity patterns of microorganisms, such as diatoms, in the present day. To study this interplay, we compared diatom community composition variance within and among seven ecoregions and assessed the explanatory power of environmental, spatial and historical drivers. This was done by a combination of correlation analyses, multivariate methods and constrained ordinations. We also deconstructed the whole community data set into ecological guilds (low‐ and high‐profile, and motile) to explore their individual response to the contemporary and historical drivers. Taken together, these analyses indicated that contemporary constraints to species occurrence and dispersal, as well as the legacies of historical events, can provide an explanation for the contemporary distribution of diatoms in the Colombian Orinoco. Specifically, we provided evidence showing that both historical legacies and contemporary environmental conditions (temperature, pH, and phosphorus concentration) are interacting to determine diatoms' distribution. Our results suggest the need to consider ecoregional gradients for unraveling the mechanisms shaping tropical diversity as well as for designing conservation plans. [ABSTRACT FROM AUTHOR]

Oleaginous microalgae with high biomass productivity, lipid content, and lipid productivity are desirable for sustainable biofuel production. Rapid and accurate quantification of lipid content facilitates the identification of promising microalgae candidates. In the present study, 23 freshwater microalgae species from river Noyyal were isolated and identified based on their morphological and molecular (18S rRNA) features and recorded as Karunya Algae Culture Collection (KACC). Their biomass and lipid content were characterized and screened using FT-IR, Nile red staining, and gravimetric method. Results generated from FT-IR spectra differentiated KACC microalgae based on their biochemical contents with Scenedesmus rubescens KACC 2 and Chlorococcum sp. KACC 13 possessed high total protein and lipid content, respectively. Nile red fluorescence at 530/575 nm showed the yellow fluorescence under a fluorescent microscope giving the evidence of high neutral lipids in 10 KACC microalgae isolates. Total lipid content showed prominent variation between the KACC isolates and found in the range of 4 to 32% of DW. Lipid productivity and biomass productivity showed a similar pattern among KACC strains. Thus, our findings serve as a baseline data on the bioprospecting potential of KACC isolates from river Noyyal, an unexplored area of Western Ghats. [ABSTRACT FROM AUTHOR]

Temporary streams are submitted to high seasonal hydrological variations which induce habitat fragmentation. Global change promotes longer non-flow periods, affecting hydrological continuity and the distribution of biological assemblages in river networks. We aimed to investigate the effects of hydrological discontinuity on phototrophic biofilm assemblages in a Mediterranean stream, at both network and habitat scales. At the network scale during basal flow conditions, mostly nitrate and DOC concentrations were associated to the taxonomical and trait distribution of algae and cyanobacterial assemblages. Cyanobacteria dominated at the upstream and downstream sites of the network, while green algae and diatoms were abundant in its middle part. At the habitat scale, hydrological discontinuity promoted large changes in biofilm composition between riffles and pools, where pools were inhabited preferentially by green algae and riffle habitats by cyanobacteria. Our findings emphasize the myriad of factors affecting the spatial distribution of phototrophic biofilms, which become more heterogeneous according to water flow interruption. Under the predicted climate change scenarios, spatial heterogeneity in temporary streams may increase, which will lead to change phototrophic biofilm assemblages. [ABSTRACT FROM AUTHOR]

Our project sought to determine ecological effects of adding low‐head dams and levees to large rivers by examining potential changes to aquatic food webs over a 70‐year period in the Lower Ohio River (LOR) and Upper Mississippi River (UMR).We employed museum collections of fish and compound specific stable isotope analysis of amino acids to evaluate long‐term changes in primary food sources for multiple species of fish in each river.Fishes in both rivers depended more on autochthonous than allochthonous carbon sources throughout the 70‐year period (based on measurements of isotopic signatures of algae, C3 plants, C4 plants, cyanobacteria, and fungi), but the relative use of different carbon sources differed between the UMR and LOR. Significant but opposite shifts in trophic positions (TP) between rivers over time (higher TP in the UMR; lower in the LOR) were correlated with major anthropogenic changes to habitat structure (e.g. slight decrease in abundance of side channels in the UMR; increase in pool water depth in the LOR) resulting from low‐head dam construction. They may also have been influenced by likely increased primary productivity in the UMR from agricultural nitrogen inputs and by possible shifts in the importance of phytoplankton versus benthic algae in the LOR from changes in water depth. Shifts in trophic position and reliance on various food sources were not correlated with variation in discharge, gage height, or temperature.Although these two rivers have contrasting hydrogeomorphic complexity (UMR is an anastomosing river, while the LOR is a constricted channel river) and different discharge patterns (seasonal versus yearly operation in some cases), both differ substantially from rivers having hydrogeomorphic changes resulting from construction of high dams (>15 m). It is not surprising, therefore, that factors controlling trophic position and reliance on different carbon sources vary among different types of dams and river structures. [ABSTRACT FROM AUTHOR]

In southeastern Ohio, active remediation of streams affected by Acid Mine Drainage (AMD) has proven to be successful for some streams, while others have not recovered based on macroinvertebrate assessment. In this study, biofilms were collected from three Moderately Impaired, three Recovered, and two Unimpaired streams. The biodiversity was characterized by metabarcoding using two universal barcode markers (16S and 18S) along with two algal specific markers (UPA and rbcL) and high‐throughput amplicon sequencing. For each marker, the ordination of Bray–Curtis Index calculated from the total Amplicon Sequence Variants (ASVs) present in each stream showed the Unimpaired and Recovered streams clustered, while Moderately Impaired streams were more distant. Focusing on the algal ASVs, the Shannon index for the rbcL, and UPA markers showed significantly lower alpha diversity in Moderately Impaired streams compared to Unimpaired streams, but the Recovered streams were not significantly different from the other two stream categories. The two universal markers together captured all algal phyla providing an outline of the diversity, but the two algal specific markers produced a greater number of ASVs and taxonomic depth for algal taxa. Further examination of the UPA marker revealed a drastic decrease in relative abundance of diatoms in Moderately Impaired streams compared to Recovered and Unimpaired streams. Likewise, diatom genera identified in the rbcL data and indicative of stream water quality showed marked differences in relative abundance among stream categories. Although all markers were useful, the algal‐specific UPA and rbcL contributed more insights into algal community differences among stream categories. [ABSTRACT FROM AUTHOR]

Epilithic algal community structure and function are important indicators of stream ecosystem health and are sensitive to ambient environmental changes. In this study, we examined the impact of light and nutrients on epilithic algal community structure and function by an in situ nutrient addition and shaded canopy experiment in subtropical streams in China. Epilithic algae structure, dominated by diatoms, was significantly different with nutrient addition and light reduction. Nutrient addition increased the epilithic algae and diatom density, colonial life-forms, planktonic diatoms, and high-profile diatoms but decreased the low-profile diatoms. The shaded canopy increased the low-profile diatoms but decreased the adnate life-forms, planktonic diatoms, and high-profile diatoms. Epilithic metabolism, including gross primary production (GPP), net daily metabolism (NDM), and production/respiration (P/R) increased with nutrient addition, while respiration (R) only increased when the canopy was open with nutrient addition. Epilithic GPP had a significant positive correlation with diatom density (P < 0.01, R2 = 0.9425). Our results indicated that changes in epilithic algae structure due to changes in riparian canopy coverage and nutrients could affect epilithic algal community function. Quantifying the impacts of such drivers on community structure and function is vital to effective river management. [ABSTRACT FROM AUTHOR]

Our study characterized the food web of a shaded stream to investigate consumer food choices and food source quality. We measured fatty acids (FA) and elemental carbon (C), nitrogen (N), and phosphorus (P) of autochthonous and allochthonous resources and macroinvertebrates (Hydropsyche sp., Ephemerella sp., Rhyacophila sp., and crayfish-Cambaridae). We examined trophic links using FAs and identified food source quality based on essential fatty acids (EFAs) and elemental nutrients. Autochthonous food sources had greater EFA content (20:5ω3 in periphyton, 20:4ω6 in bryophyte Hygrohypnum) than terrestrial matter. FAs confirmed the grazing nature of Ephemerella. Periphyton may release this invertebrate from N and P limitation, and FA biochemical constraints. Limitation by elemental nutrients, but not FAs, may exist for Hydropsyche if feeding solely on transported matter. Crayfish FA signature suggests consumption of the bryophyte Hygrohypnum as well as terrestrial matter. Our data demonstrate that autochthonous sources are crucial for many invertebrates in shaded streams, despite limited light availability. However, detrital food sources can also be important and their contribution to stream food webs should not be overlooked. Our study highlights the importance of measuring nutrient and biochemical constraints in order to understand factors driving secondary production in streams. [ABSTRACT FROM AUTHOR]

The authors discuss a new method for using regression analysis to study nutrient concentrations in periphyton. It mentions the use of nutrient concentrations in cases of eutrophication, the study of periphyton biomass in rivers in New Zealand, and how regression models can identify biomass size.

The conversion of forests to agriculture in tropical areas profoundly changes adjacent streams by modifying hydrological conditions, altering light regimes, and increasing nutrient concentrations. In this study, we used an integrative approach to examine how transformations of intact forests affected the physical, chemical, and biological properties of periphyton, in three Brazilian Atlantic rainforest streams. We found that riparian land use change affected the stream periphyton in a variety of ways that were linked to the availability of light and nutrients. Periphyton standing stocks and accrual rates of new periphyton biomass on tiles were higher in deforested reaches than forested reaches. Linear mixed‐model analyses showed that the increase of chlorophyll‐a in the periphyton was explained by the increase in deforestation and soluble reactive phosphorus concentration. Deforestation also altered periphyton stoichiometry as deforested streams exhibited lower C:P, whereas C:N ratios decreased with increasing NH4+ concentration that was higher in some deforested reaches. Periphyton productivity appeared to be limited by light in forested reaches and by nutrients in deforested reaches. There was differential availability of nitrogen and phosphorus in the deforested reaches, depending on land use type, and this resulted in different nutrient limitation. Periphyton community structure shifted from taxa less tolerant to high nutrients and light found in forested sites, to species tolerant to these conditions dominating periphyton assemblages in deforested sites. The loss of canopy cover was the strongest predictor of community composition for all sites, whereas phosphorus concentration was the best predictor of algal abundance in deforested reaches. This study highlights the complex effects of forest clearing on stream periphyton, ranging from changes to biomass accrual, nutrient limitation, stoichiometry, and community structure. We show the importance of using a comprehensive approach to help determine and predict how deforestation impacts stream ecosystems. [ABSTRACT FROM AUTHOR]

The spatial distribution of picophytoplankton abundance, biomass, chlorophyll a and the contribution of picoalgae to the total chlorophyll a was studied in the outer Ob River estuary with the adjacent shelf and in the western part of the Kara Sea. In August–September, the picophytoplankton abundance and biomass varied from 0.1 to 17.3 × 106 cell/L and from 0.06 to 9.20 mg С/m3, respectively. Photosynthetic picoeukaryotes dominated in the plankton picofraction; the contribution of cyanobacteria to the total picophytoplankton biomass did not exceed 11%. The highest contribution of picophytoplankton to the total phytoplankton abundance was observed at a lower (<11 mg/m2) euphotic zone integrated chlorophyll a. The spatial heterogeneity of picoforms contribution was determined by the silicon concentration. [ABSTRACT FROM AUTHOR]

The desmid Oocardium stratum is restricted to short sections of active limestone-precipitating springs (LPS) and adjacent headstreams. We studied the succession of photoautotrophic biofilms on artificial substrate at three sites in an LPS stream in spring, summer and autumn. We exposed frosted glass slides between 3 and 12 weeks, and measured calcium carbonate precipitation (CCP), nutrients and environmental parameters. Relative amounts of O. stratum, Bacillariophyceae and Cyanobacteria to overall biomass of the photoautotrophic biofilm were estimated by means of class-specific photosynthetic pigments. Overall, 77% of the photoautotrophic biomass consisted of diatoms, 20% were related to O. stratum and 3% were related to Cyanobacteria. Biomass of O. stratum and diatoms showed a significant correlation with CCP (r = 0.61 and 0.46), while for Cyanobacteria there was no significant correlation. CCP increased exponentially over time and peaked in late summer and late autumn (maximum CCP measured as ash mass was around 10 µg mm−2 week−1). We applied generalised multiple linear regression models (GLM) to evaluate the influence of stream site, weeks of exposure, season and CCP on biofilm development. According to GLM, the biomass of O. stratum was associated with site, exposure time, season and CCP, while the biomass of Cyanobacteria and Bacillariophyceae were not associated with the input variables. The negative standardised beta coefficient of cyanobacterial biomass in the multivariate regression model for the biomass of O. stratum suggest a competition between the two taxa. This likely explains the restricted occurrence of O. stratum within a short section of the active LPS stream. [ABSTRACT FROM AUTHOR]

The current study conducted in the summer to the study the effect of some environmental factors and the nature of the chemical composition of soil texture that the nature of chemical composition and soil texture has an effect on the diversity of epipelic algae, as 96 species were diagnosed that belongs to (37) genus. The site where the highest number of diagnosed algae species (44 species) was recorded compared to other sites with a high percentage of calcium and calcium carbonate and the soil texture at the site above was characterized by the highest percentage of sand (23.81%). The lowest percentage of alluvial soil (27.48%), while the lowest number of diagnosed species (18 species) was characterized by a high percentage of heavy metals (cadmium, iron, chromium, lead and zinc) and a decrease in the value of the silica, while the soil texture of the same site was characterized by the highest percentage for clay (51.743%). [ABSTRACT FROM AUTHOR]

Impact of barge movement on phytoplankton abundance and biomass was assessed in the lower stretch of river Ganga, popularly known as Bhagirathi-Hooghly river, during April 2016 to March, 2017. Based on the magnitude of tide, intensity of shipping and boating activities, the stretch from Baranagar to Lalbag (278 km), located at latitude (22°38'33.41"N to 24°10'59.75"N) and longitude (88°21'21.29"E to 88°16'5.65"E) was divided into three zones viz. zone—I (Baranagar to Barrackpore), zone II (Triveni to Balagarh) and zone III (Nabadweep to Lalbag). Water samples were collected randomly from six stations covering 22 barge movements at their passage at three different time intervals viz., 30 minutes before ‘barge movement’, during ‘barge movement’ and 30 minutes after ‘barge movement’. Analysis revealed the presence of 52 phytoplankton taxa belonged to 5 phylum during the study period. The abundance of phytoplankton was highest in zone—I followed by zone III and the zone II. A 44% decrease (1,997 ±1,510 ul-1) in phytoplankton abundance was observed during ‘barge movement’ with respect to normal condition (3,513 ± 2,239 ul-1) which could be due to propeller turbulence in the passage. Cell damage study revealed 21% damage in phytoplankton cell structure in ‘during barge’ followed by ‘after barge’ (10%) condition compared to natural state (6%). Study revealed that phytoplankton biomass (Chlorophyll a) was influenced by ‘barge movement’ in the sampling stretches and the impact was assessed by one way ANOVA. The effect was found significant at Barrackpore (p <0.01), Triveni (p <0.01), Balagarh (p <0.01) and Lalbag (p <0.01) where as it was insignificant at Baranagar and Nabadweep, which may be due to continuous and existing boat trafficking at Baranagar and Nabadweep. Two way ANOVA computed using ‘barge movement’ and sampling stations showed significant (p<0.01) effect on magnitude of Chl a concentrations in the sampling locations. Thus, the ‘barge movement’ influenced phytoplankton abundance and biomass, it had a detrimental effect on phytoplankton cell architecture also. The data set of this work serves as foundation information to understand the ecological implications augmented barge induced environmental disturbances in waterways. This is the first such study which depicts the impact of ‘barge movement’ on aquatic food chain linkages in Bhagirathi- Hooghly river. [ABSTRACT FROM AUTHOR]

Study of species composition and quantitative parameters of phytoplankton community was done along of the flow of Marmarik River. Frequency of occurrence of algae was determined, ecological and geographical characteristic was carried out. Based on the bio indication methods water quality of the river was assessed. [ABSTRACT FROM AUTHOR]

This study was aimed to provide the baseline information of epiphytic diatom communities in the Tigris river within Wasit Province to fill the information gap on the algal distribution. This investigation was conducted on epiphytic diatoms from two macrophytes (Ceratophyllum demersum and Myriophyllum alterniflorum) and related physicochemical parameters of the river from June 2015 to May 2016. Three sites were selected along the river (Al-Aziziyah, Zubaidiyah, and Numaniyah). Qualitative and quantitative study of epiphytic diatoms was investigated. A total of 277 species of epiphytic diatoms were identified on both macrophytes, these diatoms belonged to 27 genera for C. demersum and 28 genra for M. alterniflorum. A total number of diatom species were ranged from 801.8× 104 cell.g-1 at site 3 to 1159.72 ×104 cell.g-1 at 1for C. demersum, while on M. alterniflorum were ranged (87.24 × 104 -545.68×104 cell.g-1) at site1. The study revealed that diatoms were abundant, reflecting the quality of water and determine the extent of pollution and polluted type. [ABSTRACT FROM AUTHOR]

Turnasuyu Valley is one of the most important green valleys in the north of Anatolia. Located in this valley, Turnasuyu Creek is the major stream of the region. The community structure of benthic algae in Turnasuyu Creek was studied over a 1-year period between February 2017 and January 2018 from three stations. The epilithic algal flora and the dominancy of identified species were determined. A total of 174 taxa were identified from epilithic habitats. In the community of epilithic algae, members of Bacillariophyta were dominant (88 taxa, 51%) and Achnanthidium minutissimum (Kützing) Czarnecki, Cymbella affinis Kützing and Didymosphenia geminata (Lyngbye) Mart. Schmidt, Encyonema minutum (Hilse) D.G. Mann, Fragilaria capucina Desmazières, F. crotonensis Kitton, Hannaea arcus (Ehrenberg) R.M.Patrick and Ulnaria ulna (Nitzsch) Compère have been the most frequent species found. In addition to diatoms, Pseudanabaena from Cyanobacteria, Oedogonium and Ulothrix from Chlorophyta and Spirogyra from Charophyta were the most frequent taxa in the algal flora. Assessment of physicochemical and biological data showed that the upstream region was oligosaprobic (clean) and the downstream region was oligo-ß-mesosaprobic (clean to slightly pollute). Slight pollution in the downstream zone may be due to anthropogenic pressures. The general trophic status of Turnasuyu Creek is considered oligo-mesotrophic. [ABSTRACT FROM AUTHOR]

Trichodesmium, a filamentous bloom-forming marine cyanobacterium, plays a key role in the biogeochemistry of oligotrophic ocean regions because of the ability to fix nitrogen. Naturally occurring in the Great Barrier Reef (GBR), the contribution of Trichodesmium to the nutrient budget may be of the same order as that entering the system via catchment runoff. However, the cyclicity of Trichodesmium in the GBR is poorly understood and sparsely documented because of the lack of sufficient observations. This study provides the first systematic analysis of Trichodesmium spatial and temporal occurrences in the GBR over the decade-long MERIS ocean color mission (2002–2012). Trichodesmium surface expressions were detected using the Maximum Chlorophyll Index (MCI) applied to MERIS satellite imagery of the GBR lagoonal waters. The MCI performed well (76%), albeit tested on a limited set of images (N = 25) coincident with field measurements. A north (Cape York) to south (Fitzroy) increase in the extent, frequency and timing of the surface expressions characterized the GBR, with surface expressions extending over several hundreds of kilometers. The two southernmost subregions Mackay and Fitzroy accounted for the most (70%) bloom events. The bloom timing of Trichodesmium varied from May in the north to November in the south, with wet season conditions less favorable to Trichodesmium aggregations. MODIS-Aqua Sea Surface Temperature (SST) datasets, wind speed and field measurements of nutrient concentrations were used in combination with MCI positive instances to assess the blooms’ driving factors. Low wind speed (<6 m.s-1) and SST > 24°C were associated with the largest surface aggregations. Generalized additive models (GAM) indicated an increase in bloom occurrences over the 10-year period with seasonal bloom patterns regionally distinct. Interannual variability in SST partially (14%) explained bloom occurrences, and other drivers, such as the subregion and the nutrient budget, likely regulate Trichodesmium surface aggregations in the GBR. [ABSTRACT FROM AUTHOR]

Lake Okeechobee, FL, USA, has been subjected to intensifying cyanobacterial blooms that can spread to the adjacent St. Lucie River and Estuary via natural and anthropogenically-induced flooding events. In July 2016, a large, toxic cyanobacterial bloom occurred in Lake Okeechobee and throughout the St. Lucie River and Estuary, leading Florida to declare a state of emergency. This study reports on measurements and nutrient amendment experiments performed in this freshwater-estuarine ecosystem (salinity 0–25 PSU) during and after the bloom. In July, all sites along the bloom exhibited dissolved inorganic nitrogen-to-phosphorus ratios < 6, while Microcystis dominated (> 95%) phytoplankton inventories from the lake to the central part of the estuary. Chlorophyll a and microcystin concentrations peaked (100 and 34 μg L-1, respectively) within Lake Okeechobee and decreased eastwards. Metagenomic analyses indicated that genes associated with the production of microcystin (mcyE) and the algal neurotoxin saxitoxin (sxtA) originated from Microcystis and multiple diazotrophic genera, respectively. There were highly significant correlations between levels of total nitrogen, microcystin, and microcystin synthesis gene abundance across all surveyed sites (p < 0.001), suggesting high levels of nitrogen supported the production of microcystin during this event. Consistent with this, experiments performed with low salinity water from the St. Lucie River during the event indicated that algal biomass was nitrogen-limited. In the fall, densities of Microcystis and concentrations of microcystin were significantly lower, green algae co-dominated with cyanobacteria, and multiple algal groups displayed nitrogen-limitation. These results indicate that monitoring and regulatory strategies in Lake Okeechobee and the St. Lucie River and Estuary should consider managing loads of nitrogen to control future algal and microcystin-producing cyanobacterial blooms. [ABSTRACT FROM AUTHOR]

This study aims to contribute to the understanding of the impact of Didymosphenia geminata massive growths upon river ecosystem communities’ composition and functioning. This is the first study to jointly consider the taxonomic composition and functional structure of diatom and macroinvertebrate assemblages in order to determine changes in community structure, and the food web alterations associated with this invasive alga. This study was carried out in the Lumbreras River (Ebro Basin, La Rioja, Northern Spain), which has been affected by a considerable massive growth of D. geminata since 2011. The study shows a profound alteration in both the river community composition and in the food web structure at the sites affected by the massive growth, which is primarily due to the alteration of the environmental conditions, thus demonstrating that D. geminata has an important role as an ecosystem engineer in the river. Thick filamentous mats impede the movement of large invertebrates—especially those that move and feed up on it—and favor small, opportunistic, herbivorous organisms, mainly chironomids, that are capable of moving between filaments and are aided by the absence of large trophic competitors and predators -prey release effect-. Only small predators, such as hydra, are capable of surviving in the new environment, as they are favored by the increase in chironomids, a source of food, and by the reduction in both their own predators and other midge predators -mesopredator release-. This change in the top-down control affects the diatom community, since chironomids may feed on large diatoms, increasing the proportion of small diatoms in the substrate. The survival of small and fast-growing pioneer diatoms is also favored by the mesh of filaments, which offers them a new habitat for colonization. Simultaneously, D. geminata causes a significant reduction in the number of diatoms with similar ecological requirements (those attached to the substrate). Overall, D. geminata creates a community dominated by small organisms that is clearly different from the existing communities in the same stream where there is an absence of massive growths. [ABSTRACT FROM AUTHOR]

We evaluate the changes on the hydrological (temperature and salinity) and biogeochemical (phytoplankton biomass) characteristics of the Mediterranean Sea induced by freshwater flow modifications under two different scenarios for the end of the 21st century. An ensemble of four regional climate model realizations using different global circulation models at the boundary and different emission scenarios are used to force a single ocean model for the Mediterranean Sea. Freshwater flow is modified according to the simulated changes in the precipitation rates for the different rivers’ catchment regions. To isolate the effect resulting from a change in freshwater flow, model results are evaluated against a ‘baseline’ simulation realized assuming a constant inflow equivalent to climatologic values. Our model results indicate that sea surface salinity could be significantly altered by freshwater flow modification in specific regions and that the affected area and the sign of the anomaly are highly dependent on the used climate model and emission scenario. Sea surface temperature and phytoplankton biomass, on the contrary, show no coherent spatial pattern but a rather widespread scattered response. We found in open-water regions a significant negative relationship between sea surface temperature anomalies and phytoplankton biomass anomalies. This indicates that freshwater flow modification could alter the vertical stability of the water column throughout the Mediterranean Sea, by changing the strength of vertical mixing and consequently upper water fertilization. In coastal regions, however, the correlation between sea temperature anomalies and phytoplankton biomass is positive, indicating a larger importance of the physiological control of growth rates by temperature. [ABSTRACT FROM AUTHOR]

Acidification has adversely affected freshwater ecosystems in many areas, and recovery from acidification is often interrupted by acidic events. We lack detailed information about how benthic algae react to short-term acidic events and long-term recovery from acidification. We sampled 15 stream sites in the Czech Republic to study the effects of (a) water pH, aluminium and lead concentrations, (b) short-term acidic events, (c) 20 years of recovery from acidification and (d) high phosphorus concentrations combined with low pH on soft-bodied benthic algae. Water pH and aluminium concentrations affected benthic algal assemblages, but the acidification index periphyton (AIP) mainly reflected pH. Benthic algal assemblages reflected recent acidic events more closely than maximum or average pH. Our results indicate that the reaction of benthic algae to pH results from a fast effect of pH minima that cause sensitive species to disappear within a few months, and a slower process of dispersal and competition for resources during periods of higher pH. After an acidic event, recolonization of stream sites by sensitive species had started within 2 years, and was largely completed after 9 years. Our data indicate that acidification may mask the effect of enhanced phosphorus concentrations on benthic algal eutrophication indices. [ABSTRACT FROM AUTHOR]

The coastal marine ecosystem near the Elwha River was altered by a massive sediment influx—over 10 million tonnes—during the staged three-year removal of two hydropower dams. We used time series of bathymetry, substrate grain size, remotely sensed turbidity, scuba dive surveys, and towed video observations collected before and during dam removal to assess responses of the nearshore subtidal community (3 m to 17 m depth). Biological changes were primarily driven by sediment deposition and elevated suspended sediment concentrations. Macroalgae, predominantly kelp and foliose red algae, were abundant before dam removal with combined cover levels greater than 50%. Where persistent sediment deposits formed, macroalgae decreased greatly or were eliminated. In areas lacking deposition, macroalgae cover decreased inversely to suspended sediment concentration, suggesting impacts from light reduction or scour. Densities of most invertebrate and fish taxa decreased in areas with persistent sediment deposition; however, bivalve densities increased where mud deposited over sand, and flatfish and Pacific sand lance densities increased where sand deposited over gravel. In areas without sediment deposition, most invertebrate and fish taxa were unaffected by increased suspended sediment or the loss of algae cover associated with it; however, densities of tubeworms and flatfish, and primary cover of sessile invertebrates increased suggesting benefits of increased particulate matter or relaxed competition with macroalgae for space. As dam removal neared completion, we saw evidence of macroalgal recovery that likely owed to water column clearing, indicating that long-term recovery from dam removal effects may be starting. Our results are relevant to future dam removal projects in coastal areas and more generally to understanding effects of increased sedimentation on nearshore subtidal benthic communities. [ABSTRACT FROM AUTHOR]

The study of the microbial communities has gained traction in recent years with the advent of next-generation sequencing with, or without, PCR-based amplification of the 16S ribosomal RNA region. Such studies have been applied to topics as diverse as human health and environmental ecology. Fewer studies have investigated taxa outside of bacteria, however. We present here data demonstrating the utility of studying taxa outside of bacteria including algae, diatoms, archaea and fungi. Here, we show how location along the Cuyahoga River as well as a transient rainfall event heavily influence the microbial composition. Our data reveal how individual OTUs vary between samples and how the patterns of OTU abundance can accurately predict sampling location. The clustering of samples reveals that these taxa are all sensitive to water conditions in unique ways and demonstrate that, for our dataset, algae was most distinctive between sample groups, surpassing bacteria. Diversity between sampling sites could allow studies investigating pollution or water quality to identify marker OTUs or patterns of OTU abundance as indicators to assess environmental conditions or the impact of human activity. We also directly compare data derived from primers amplifying distinct taxa and show that taxa besides bacteria are excellent indicators of water condition. [ABSTRACT FROM AUTHOR]

The fate of bioavailable nitrogen species transported through agricultural landscapes remains highly uncertain given complexities of measuring fluxes impacting the fluvial N cycle. We present and test a new numerical model named Technology for Removable Annual Nitrogen in Streams For Ecosystem Restoration ( TRANSFER), which aims to reduce model uncertainty due to erroneous parameterization, i.e., equifinality, in stream nitrogen cycle assessment and quantify the significance of transient and permanent removal pathways. TRANSFER couples nitrogen elemental and stable isotope mass-balance equations with existing hydrologic, hydraulic, sediment transport, algal biomass, and sediment organic matter mass-balance subroutines and a robust GLUE-like uncertainty analysis. We test the model in an agriculturally impacted, third-order stream reach located in the Bluegrass Region of Central Kentucky. Results of the multiobjective model evaluation for the model application highlight the ability of sediment nitrogen fingerprints including elemental concentrations and stable N isotope signatures to reduce equifinality of the stream N model. Advancements in the numerical simulations allow for illumination of the significance of algal sloughing fluxes for the first time in relation to denitrification. Broadly, model estimates suggest that denitrification is slightly greater than algal N sloughing (10.7% and 6.3% of dissolved N load on average), highlighting the potential for overestimation of denitrification by 37%. We highlight the significance of the transient N pool given the potential for the N store to be regenerated to the water column in downstream reaches, leading to harmful and nuisance algal bloom development. [ABSTRACT FROM AUTHOR]

Studies in freshwater ecosystems are seeking to improve understanding of carbon flow in food webs and stable isotopes have been influential in this work. However, variation in isotopic values of basal production sources could either be an asset or a hindrance depending on study objectives. We assessed the potential for basin geology and local limnological conditions to predict stable carbon and nitrogen isotope values of six carbon sources at multiple locations in four Neotropical floodplain ecosystems (Paraná, Pantanal, Araguaia, and Amazon). Limnological conditions exhibited greater variation within than among systems. δ15N differed among basins for most carbon sources, but δ13C did not (though high within-basin variability for periphyton, phytoplankton and particulate organic carbon was observed). Although δ13C and δ15N values exhibited significant correlations with some limnological factors within and among basins, those relationships differed among carbon sources. Regression trees for both carbon and nitrogen isotopes for all sources depicted complex and in some cases nested relationships, and only very limited similarity was observed among trees for different carbon sources. Although limnological conditions predicted variation in isotope values of carbon sources, we suggest the resulting models were too complex to enable mathematical corrections of source isotope values among sites based on these parameters. The importance of local conditions in determining variation in source isotope values suggest that isotopes may be useful for examining habitat use, dispersal and patch dynamics within heterogeneous floodplain ecosystems, but spatial variability in isotope values needs to be explicitly considered when testing ecosystem models of carbon flow in these systems. [ABSTRACT FROM AUTHOR]

Increased nutrient and sediment loading in rivers have caused observable changes in algal community composition, and thereby, altered the quality and quantity of food resources available to native freshwater mussels. Our objective was to characterize the relationship between nutrient conditions and mussel food quality and examine the effects on fatty acid composition, growth and survival of juvenile mussels. Juvenile Lampsilis cardium and L. siliquoidea were deployed in cages for 28 d at four riverine and four lacustrine sites in the lower St. Croix River, Minnesota/Wisconsin, USA. Mussel foot tissue and food resources (four seston fractions and surficial sediment) were analyzed for quantitative fatty acid (FA) composition. Green algae were abundant in riverine sites, whereas cyanobacteria were most abundant in the lacustrine sites. Mussel survival was high (95%) for both species. Lampsilis cardium exhibited lower growth relative to L. siliquoidea (p <0.0001), but growth of L. cardium was not significantly different across sites (p = 0.13). In contrast, growth of L. siliquoidea was significantly greater at the most upstream riverine site compared to the lower three lacustrine sites (p = 0.002). In situ growth of Lampsilis siliquoidea was positively related to volatile solids (10 – 32 μm fraction), total phosphorus (<10 and 10 – 32 μm fractions), and select FA in the seston (docosapentaeonic acid, DPA, 22:5n3; 4,7,10,13,16-docosapentaenoic, 22:5n6; arachidonic acid, ARA, 20:4n6; and 24:0 in the <10 and 10 – 32 μm fractions). Our laboratory feeding experiment also indicated high accumulation ratios for 22:5n3, 22:5n6, and 20:4n6 in mussel tissue relative to supplied algal diet. In contrast, growth of L. siliquiodea was negatively related to nearly all FAs in the largest size fraction (i.e., >63 μm) of seston, including the bacterial FAs, and several of the FAs associated with sediments. Reduced mussel growth was observed in L. siliquoidea when the abundance of cyanobacteria exceeded 9% of the total phytoplankton biovolume. Areas dominated by cyanobacteria may not provide sufficient food quality to promote or sustain mussel growth. [ABSTRACT FROM AUTHOR]

A comprehensive study of water quality, phytoplankton biomass, and photosynthetic rates in Liaodong Bay, China, during June and July of 2013 revealed two large patches of high biomass and production with dimensions on the order of 10 km. Nutrient concentrations were above growth-rate-saturating concentrations throughout the bay, with the possible exception of phosphate at some stations. The presence of the patches therefore appeared to reflect the distribution of water temperature and variation of light penetration restricted by water turbidity. There was no patch of high phytoplankton biomass or production in a third, linear patch of water with characteristics suitable for rapid phytoplankton growth; the absence of a bloom in that patch likely reflected the fact that the width of the patch was less than the critical size required to overcome losses of phytoplankton to turbulent diffusion. The bottom waters of virtually all of the eastern half of the bay were below the depth of the mixed layer, and the lowest bottom water oxygen concentrations, 3–5 mg L–1, were found in that part of the bay. The water column in much of the remainder of the bay was within the mixed layer, and oxygen concentrations in both surface and bottom waters exceeded 5 mg L–1. [ABSTRACT FROM AUTHOR]

Diatoms are one of the key organisms used in biomonitoring studies and they occur in a wide variety of environments, exhibiting a broad range of tolerance to abiotic factors. Historically, the first freshwater diatom study in Turkey was conducted in 1844 by Ehrenberg based on the material collected from the Murat and Aras Rivers. Situated between large continents (Eurasia and Africa), Turkey comprises areas of very diverse geological, climatic and environmental conditions, so we should expect that organisms such as diatoms show high diversity in this region. The aim of this study is to present new sites of rare and new records in Turkey from different genera along with morphological and ecological characteristics. As a result, a total of 73 species (24 rare and 49 new records) are presented in this study. [ABSTRACT FROM AUTHOR]

The conservation and management of site-attached assemblages of coastal reefs are particularly challenging because of the tremendous environmental variation that exists at small spatial scales. In this sense, understanding the primary sources of variation in spatial patterns of the biota is fundamental for designing effective conservation policies. We investigated spatial variation in fish assemblages around the windward and leeward sides of coastal islands situated across a gradient of riverine influence (13 km in length). Specifically, relationships between rocky reef fish assemblages and benthic, topographic and physical predictors were assessed. We hypothesized that river induced disturbances may overcome local habitat features in modeling spatial patterns of fish distribution. Fish assemblages varied primarily due to the strong directional gradient of riverine influence (22.6% of the estimated components of variation), followed by topographic complexity (15%), wave exposure (9.9%), and benthic cover (8%). The trophic structure of fish assemblages changed from having a high abundance of invertebrate feeders in macroalgae-dominated reefs close to river mouths to a high proportion of herbivores, planktivores and invertebrate feeder species in reefs with large boulders covered by epilithic algal matrices, as the distance from rivers increased. This gradient led to an increase of 4.5-fold in fish richness and fish trophic group diversity, 11-fold in fish biomass and 10-fold in fish abundance. Our results have implications for the conservation and monitoring of assemblages patchily distributed at small spatial scales. The major role of distance from river influences on fish assemblages rather than benthic cover and topographic complexity suggest that managing land-based activities should be a conservation priority toward reef restoration. [ABSTRACT FROM AUTHOR]

In recent decades, increasing frequency and intensity of saltwater intrusion in the Modaomen Channel has threatened the freshwater supply in the surrounding cities of the Pearl River Estuary, and ulteriorly changed the environmental conditions of the estuarine waters. Phytoplankton biomass, primary production (PP) and species composition, as well as hydrological and chemical parameters were examined along a downstream transect in the Modaomen Channel during neap tide (NT) and spring tide (ST), when a strong saltwater intrusion event occurred in late September, 2011. A total of 46 species phytoplankton were identified, including Bacillariophyta (25 species), Dinoflagellate (14 species), Chlorophyta (4 species), Cyanophyta (2 species) and Euglenozoa (1 species). The dominant species were shifted from freshwater diatoms (e.g., Melosira granulata and Melosira granulata var. angustissima) in the upper reaches to saline water diatoms (e.g., Skeletonema costatum and Coscinodiscus sp.) in the river mouth. Generally, phytoplankton density, biomass (chl-a) and PP decreased from the upper to lower reaches along the channel, and were significantly higher in NT than those of ST. There was a shift from large-sized phytoplankton (>20 μm) in the upper reaches to relative small-sized cells (5–20 μm) in the lower reaches. Compared to NT, low discharge and flow velocity, coupled with strong easterly winds during ST specially aggravated saltwater intrusion further to the upstream (~50 km from the estuary). The intruded saltwater diluted nutrients, N/P ratios, chl-a, and phytoplankton abundances, and thereby led to a decline in PP during ST. [ABSTRACT FROM AUTHOR]