1. Monitoring Insect Transposable Elements in Large Double-Stranded DNA Viruses Reveals Host-to-Virus and Virus-to-Virus Transposition
- Author
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Jean Peccoud, Carine Meignin, Johannes A. Jehle, Sandra Guillier, Clément Gilbert, Gianpiero Gueli Alletti, Brian A. Federici, Elisabeth A. Herniou, Clémence Bouzar, Jiangbin Fan, Richard Cordaux, Jörg T. Wennmann, Vincent Loiseau, Evolution, génomes, comportement et écologie (EGCE), Institut de Recherche pour le Développement (IRD)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS), Ecologie, Evolution, Symbiose (EES), Ecologie et biologie des interactions (EBI), Université de Poitiers-Centre National de la Recherche Scientifique (CNRS)-Université de Poitiers-Centre National de la Recherche Scientifique (CNRS), Université de Poitiers-Centre National de la Recherche Scientifique (CNRS), ANR-18-CE02-0021,TranspHorizon,Transferts horizontaux d'éléments transposables: les clés d'une invasion réussie(2018), and Centre National de la Recherche Scientifique (CNRS)
- Subjects
Transposable element ,Insecta ,viruses ,[SDV]Life Sciences [q-bio] ,Population ,virus ,Biology ,AcademicSubjects/SCI01180 ,Genome ,Deep sequencing ,Virus ,Evolution, Molecular ,03 medical and health sciences ,0302 clinical medicine ,Fasttrack ,Genetics ,Animals ,lepidopterans ,insects ,education ,horizontal transfer ,Molecular Biology ,Arthropods ,Ecology, Evolution, Behavior and Systematics ,030304 developmental biology ,0303 health sciences ,education.field_of_study ,Host (biology) ,AcademicSubjects/SCI01130 ,food and beverages ,transposable element ,Viral replication ,Horizontal gene transfer ,Viruses ,DNA Transposable Elements ,Baculoviridae ,030217 neurology & neurosurgery - Abstract
The mechanisms by which transposable elements (TEs) can be horizontally transferred between animals are unknown, but viruses are possible candidate vectors. Here, we surveyed the presence of host-derived TEs in viral genomes in 35 deep sequencing data sets produced from 11 host–virus systems, encompassing nine arthropod host species (five lepidopterans, two dipterans, and two crustaceans) and six different double-stranded (ds) DNA viruses (four baculoviruses and two iridoviruses). We found evidence of viral-borne TEs in 14 data sets, with frequencies of viral genomes carrying a TE ranging from 0.01% to 26.33% for baculoviruses and from 0.45% to 7.36% for iridoviruses. The analysis of viral populations separated by a single replication cycle revealed that viral-borne TEs originating from an initial host species can be retrieved after viral replication in another host species, sometimes at higher frequencies. Furthermore, we detected a strong increase in the number of integrations in a viral population for a TE absent from the hosts’ genomes, indicating that this TE has undergone intense transposition within the viral population. Finally, we provide evidence that many TEs found integrated in viral genomes (15/41) have been horizontally transferred in insects. Altogether, our results indicate that multiple large dsDNA viruses have the capacity to shuttle TEs in insects and they underline the potential of viruses to act as vectors of horizontal transfer of TEs. Furthermore, the finding that TEs can transpose between viral genomes of a viral species sets viruses as possible new niches in which TEs can persist and evolve.
- Published
- 2021
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