19 results on '"Raag D. Airan"'
Search Results
2. Bursting bubbles for better bioavailability
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Raag D. Airan
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0301 basic medicine ,03 medical and health sciences ,Bursting ,030104 developmental biology ,0302 clinical medicine ,Chemistry ,030220 oncology & carcinogenesis ,General Medicine ,Pharmacology ,Bioavailability - Abstract
An effervescent formulation increases the oral bioavailability of hard-to-solubilize hydrophobic and hydrophilic chemotherapeutics.
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- 2020
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3. Glymphatics rapidly clear nanoparticles
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Raag D. Airan
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0301 basic medicine ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Chemistry ,030220 oncology & carcinogenesis ,Drug delivery ,Nanoparticle ,Nanotechnology ,General Medicine - Abstract
The glymphatics system of the brain rapidly clears organic nanoparticles commonly used for brain drug delivery.
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- 2020
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4. Echolocating electricity through the skull, in HD
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Raag D. Airan
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0301 basic medicine ,business.industry ,Acoustics ,Ultrasound ,General Medicine ,03 medical and health sciences ,Skull ,030104 developmental biology ,0302 clinical medicine ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,medicine ,Electricity ,business ,Geology - Abstract
Ultrasound can make high-resolution images of electrical fields across intact human skulls.
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- 2020
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5. Diffusion MRI tractography for improved transcranial MRI-guided focused ultrasound thalamotomy targeting for essential tremor
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Christian J. Thaler, Jennifer A. McNab, Maged Goubran, Kim Butts Pauly, Pejman Ghanouni, Raag D. Airan, Qiyuan Tian, Michael Zeineh, W. Jeffrey Elias, Diane S. Huss, Jaimie M. Henderson, Casey H. Halpern, and Max Wintermark
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Transcranial MRI-guided focused ultrasound ,Essential Tremor ,Ultrasonic Therapy ,Cognitive Neuroscience ,Dentatothalamic tract ,medicine.medical_treatment ,Thalamus ,lcsh:Computer applications to medicine. Medical informatics ,lcsh:RC346-429 ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Diffusion Tractography ,lcsh:Neurology. Diseases of the nervous system ,Diffusion tractography ,Brain Mapping ,business.industry ,Thalamotomy ,Motor Cortex ,Regular Article ,Magnetic Resonance Imaging ,Diffusion Magnetic Resonance Imaging ,Diffusion Tensor Imaging ,Treatment Outcome ,Dentate nucleus ,medicine.anatomical_structure ,Ventral intermediate nucleus ,Neurology ,lcsh:R858-859.7 ,Neurosurgical targeting ,Neurology (clinical) ,Nuclear medicine ,business ,030217 neurology & neurosurgery ,Diffusion MRI ,Motor cortex ,Tractography - Abstract
Purpose To evaluate the use of diffusion magnetic resonance imaging (MRI) tractography for neurosurgical guidance of transcranial MRI-guided focused ultrasound (tcMRgFUS) thalamotomy for essential tremor (ET). Materials and methods Eight patients with medication-refractory ET were treated with tcMRgFUS targeting the ventral intermediate nucleus (Vim) of the thalamus contralateral to their dominant hand. Diffusion and structural MRI data and clinical evaluations were acquired pre-treatment and post-treatment. To identify the optimal target location, tractography was performed on pre-treatment diffusion MRI data between the treated thalamus and the hand-knob region of the ipsilateral motor cortex, the entire ipsilateral motor cortex and the contralateral dentate nucleus. The tractography-identified locations were compared to the lesion location delineated on 1 year post-treatment T2-weighted MR image. Their overlap was correlated with the clinical outcomes measured by the percentage change of the Clinical Rating Scale for Tremor scores acquired pre-treatment, as well as 1 month, 3 months, 6 months and 1 year post-treatment. Results The probabilistic tractography was consistent from subject-to-subject and followed the expected anatomy of the thalamocortical radiation and the dentatothalamic tract. Higher overlap between the tractography-identified location and the tcMRgFUS treatment-induced lesion highly correlated with better treatment outcome (r = −0.929, −0.75, −0.643, p = 0.00675, 0.0663, 0.139 for the tractography between the treated thalamus and the hand-knob region of the ipsilateral motor cortex, the entire ipsilateral motor cortex and the contralateral dentate nucleus, respectively, at 1 year post-treatment). The correlation for the tractography between the treated thalamus and the hand-knob region of the ipsilateral motor cortex is the highest for all time points (r = −0.719, −0.976, −0.707, −0.929, p = 0.0519, 0.000397, 0.0595, 0.00675 at 1 month, 3 months, 6 months and 1 year post-treatment, respectively). Conclusion Our data support the use of diffusion tractography as a complementary approach to current targeting methods for tcMRgFUS thalamotomy., Highlights • Retrospectively used tractography to define a target for MRgFUS thalamotomy for ET. • Larger overlap between tractography and lesion correlates with better outcomes. • Strongest correlations for tract between the thalamus and motor hand-knob region • Diffusion tractography is a complementary approach to current targeting methods.
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- 2018
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6. Presurgical Brain Mapping of the Ventral Somatomotor Network in Patients with Brain Tumors Using Resting-State fMRI
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Haris I. Sair, Raag D. Airan, Brian Caffo, Jay J. Pillai, Martin A. Lindquist, Sachin K. Gujar, N. Yahyavi-Firouz-Abadi, Vince D. Calhoun, and Shruti Agarwal
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Male ,genetic structures ,EEG-fMRI ,Somatosensory system ,behavioral disciplines and activities ,Brain mapping ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Sørensen–Dice coefficient ,Neural Pathways ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,General linear model ,Brain Mapping ,Functional ,medicine.diagnostic_test ,Resting state fMRI ,Brain Neoplasms ,business.industry ,Magnetic resonance imaging ,Somatosensory Cortex ,Magnetic Resonance Imaging ,nervous system ,Linear Models ,Female ,Neurology (clinical) ,Analysis of variance ,business ,Neuroscience ,psychological phenomena and processes ,030217 neurology & neurosurgery - Abstract
BACKGROUND AND PURPOSE: Resting-state fMRI readily identifies the dorsal but less consistently the ventral somatomotor network. Our aim was to assess the relative utility of resting-state fMRI in the identification of the ventral somatomotor network via comparison with task-based fMRI in patients with brain tumor. MATERIALS AND METHODS: We identified 26 surgically naive patients referred for presurgical fMRI brain mapping who had undergone both satisfactory ventral motor activation tasks and resting-state fMRI. Following standard preprocessing for task-based fMRI and resting-state fMRI, general linear model analysis of the ventral motor tasks and independent component analysis of resting-state fMRI were performed with the number of components set to 20, 30, 40, and 50. Visual overlap of task-based fMRI and resting-state fMRI at different component levels was assessed and categorized as full match, partial match, or no match. Rest-versus-task-fMRI concordance was calculated with Dice coefficients across varying fMRI thresholds before and after noise removal. Multithresholded Dice coefficient volume under the surface was calculated. RESULTS: The ventral somatomotor network was identified in 81% of patients. At the subject level, better matches between resting-state fMRI and task-based fMRI were seen with an increasing order of components (53% of cases for 20 components versus 73% for 50 components). Noise-removed group-mean volume under the surface improved as component numbers increased from 20 to 50, though ANOVA demonstrated no statistically significant difference among the 4 groups. CONCLUSIONS: In most patients, the ventral somatomotor network can be identified with an increase in the probability of a better match at a higher component number. There is variable concordance of the ventral somatomotor network at the single-subject level between resting-state and task-based fMRI.
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- 2017
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7. Resting-state functional connectivity and cognitive dysfunction correlations in spinocerebelellar ataxia type 6 (SCA6)
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Raag D. Airan, Lícia Pacheco Pereira, Sarah H. Ying, Jay J. Pillai, Ann Fishman, Kalyani Kansal, Haris I. Sair, Chiadi U. Onyike, and Jerry L. Prince
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0301 basic medicine ,medicine.medical_specialty ,Ataxia ,Radiological and Ultrasound Technology ,Resting state fMRI ,business.industry ,Neuropsychology ,Audiology ,Executive functions ,medicine.disease ,Brain mapping ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Neurology ,medicine ,Spinocerebellar ataxia ,Spinocerebellar ataxia type 6 ,Radiology, Nuclear Medicine and imaging ,Neurology (clinical) ,Anatomy ,medicine.symptom ,Psychomotor disorder ,business ,030217 neurology & neurosurgery - Abstract
Objective The aim of this study is to evaluate the correlation between resting state functional MRI (RS-fMRI) activity and motor and cognitive impairment in spinocerebellar ataxia type 6 (SCA6). Methods Twelve patients with genetically confirmed SCA6 and 14 age matched healthy controls were imaged with RS-fMRI. Whole brain gray matter was automatically parcellated into 1000 regions of interest (ROIs). For each ROI, the first eigenvariate of voxel time courses was extracted. For each patient, Pearson correlation coefficients between each pair of ROI time courses were calculated across the 1000 ROIs. The set of average control correlation coefficients were fed as an undirected weighted adjacency matrix into the Rubinov and Sporns (2010) modularity algorithm. The intranetwork global efficiency of the thresholded adjacency sub-matrix was calculated and correlated with ataxia scores and cognitive performance. Results SCA6 patients showed mild cognitive impairments in executive function and visual-motor processing compared to control subjects. These neuropsychological impairments were correlated with decreased RS functional connectivity (FC) in the attention network. Conclusions Mild cognitive executive functions and visual-motor coordination impairments seen in SCA6 patients correlate with decreased resting-state connectivity in the attention network, suggesting a possible metric for the study of cognitive dysfunction in cerebellar disease. Hum Brain Mapp 38:3001–3010, 2017. © 2017 Wiley Periodicals, Inc.
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- 2017
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8. Focused Ultrasound for Noninvasive, Focal Pharmacologic Neurointervention
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Raag D. Airan, Sunmee Park, Jeffrey B. Wang, Zhenbo Huang, Muna Aryal, Niloufar Hosseini-Nassab, Daivik B. Vyas, and Tommaso Di Ianni
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medicine.medical_treatment ,neurointervention ,Review ,blood–brain barrier ,Focused ultrasound ,lcsh:RC321-571 ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,medicine ,lcsh:Neurosciences. Biological psychiatry. Neuropsychiatry ,nanotechnology ,Essential tremor ,business.industry ,General Neuroscience ,Ultrasound ,Human brain ,Ablation ,medicine.disease ,Neuromodulation (medicine) ,medicine.anatomical_structure ,drug delivery ,neuromodulation ,Drug delivery ,focused ultrasound ,Temporal acuity ,business ,030217 neurology & neurosurgery ,Neuroscience ,Biomedical engineering - Abstract
A long-standing goal of translational neuroscience is the ability to noninvasively deliver therapeutic agents to specific brain regions with high spatiotemporal resolution. Focused ultrasound (FUS) is an emerging technology that can noninvasively deliver energy up the order of 1 kW/cm2 with millimeter and millisecond resolution to any point in the human brain with Food and Drug Administration-approved hardware. Although FUS is clinically utilized primarily for focal ablation in conditions such as essential tremor, recent breakthroughs have enabled the use of FUS for drug delivery at lower intensities (i.e., tens of watts per square centimeter) without ablation of the tissue. In this review, we present strategies for image-guided FUS-mediated pharmacologic neurointerventions. First, we discuss blood–brain barrier opening to deliver therapeutic agents of a variety of sizes to the central nervous system. We then describe the use of ultrasound-sensitive nanoparticles to noninvasively deliver small molecules to millimeter-sized structures including superficial cortical regions and deep gray matter regions within the brain without the need for blood–brain barrier opening. We also consider the safety and potential complications of these techniques, with attention to temporal acuity. Finally, we close with a discussion of different methods for mapping the ultrasound field within the brain and describe future avenues of research in ultrasound-targeted drug therapies.
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- 2019
9. Whole-Brain Functional and Diffusion Tensor MRI in Human Participants with Metallic Orthodontic Braces
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Peter C.M. van Zijl, Moshe T. Stern, Nicholas I.S. Blair, Yuankui Wu, Raag D. Airan, Jun Hua, Keri S. Rosch, David Woods, Dapeng Liu, Chetan Bettegowda, Hangyi Jiang, Xinyuan Miao, Qin Qin, and Jay J. Pillai
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Adult ,Male ,Internal capsule ,Orthodontic Brackets ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Fractional anisotropy ,Fasciculus ,Image Processing, Computer-Assisted ,Medicine ,Effective diffusion coefficient ,Humans ,Radiology, Nuclear Medicine and imaging ,In patient ,Prospective Studies ,Original Research ,Braces ,biology ,business.industry ,Brain ,Reproducibility of Results ,biology.organism_classification ,Magnetic Resonance Imaging ,Orthodontic Brace ,Diffusion Tensor Imaging ,030220 oncology & carcinogenesis ,Female ,Nuclear medicine ,business ,Artifacts ,Student's t-test ,Diffusion MRI - Abstract
BACKGROUND: MRI performed with echo-planar imaging (EPI) sequences is sensitive to susceptibility artifacts in the presence of metallic objects, which presents a substantial barrier for performing functional MRI and diffusion tensor imaging (DTI) in patients with metallic orthodontic material and other head implants. PURPOSE: To evaluate the ability to reduce susceptibility artifacts in healthy human participants wearing metallic orthodontic braces for two alternative approaches: T2-prepared functional MRI and diffusion-prepared DTI with three-dimensional fast gradient-echo readout. MATERIALS AND METHODS: In this prospective study conducted from February to September 2018, T2-prepared functional MRI and diffusion-prepared DTI were performed in healthy human participants. Removable dental braces with bonding trays were used so that MRI could be performed with braces and without braces in the same participants. Results were evaluated in regions with strong (EPI dropout regions for functional MRI and the inferior fronto-occipital fasciculus for DTI) and minimal (motor cortex for functional MRI and the posterior limb of internal capsule for DTI) susceptibility artifacts. Signal-to-noise ratio (SNR), contrast-to-noise ratio for functional MRI, apparent diffusion coefficient and fractional anisotropy for DTI, and degree of distortion (quantified with the Jaccard index, which measures the similarity of geometric shapes) were compared in regions with strong or minimal susceptibility effects between the current standard EPI sequences and the proposed alternatives by using paired t test. RESULTS: Six participants were evaluated (mean age ± standard deviation, 40 years ± 6; three women). In brain regions with strong susceptibility effects from the metallic braces, T2-prepared functional MRI showed significantly higher SNR (37.8 ± 2.4 vs 15.5 ± 5.3; P < .001) and contrast-to-noise ratio (0.83 ± 0.16 vs 0.29 ± 0.10; P < .001), whereas diffusion-prepared DTI showed higher SNR (5.8 ± 1.5 vs 3.8 ± 0.7; P = .03) than did conventional EPI methods. Apparent diffusion coefficient and fractional anisotropy were consistent with the literature. Geometric distortion was substantially reduced throughout the brain with the proposed methods (significantly higher Jaccard index, 0.95 ± 0.12 vs 0.81 ± 0.61; P < .001). CONCLUSION: T2-prepared functional MRI and diffusion-prepared diffusion tensor imaging can acquire functional and diffusion MRI, respectively, in healthy human participants wearing metallic dental braces with less susceptibility artifacts and geometric distortion than with conventional echo-planar imaging. © RSNA, 2019 Online supplemental material is available for this article. See also the editorial by Dietrich in this issue.
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- 2019
10. CT and CEST MRI bimodal imaging of the intratumoral distribution of iodinated liposomes
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Shibin Zhou, Kannie W. Y. Chan, Raag D. Airan, Zelong Chen, Michael T. McMahon, Peter C.M. van Zijl, Yuguo Li, Jiadi Xu, Guanshu Liu, Yikai Xu, Zheng Han, and Jeff W.M. Bulte
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Biodistribution ,Liposome ,business.industry ,Cest mri ,Iodixanol ,030218 nuclear medicine & medical imaging ,Rhodamine ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,chemistry ,In vivo ,030220 oncology & carcinogenesis ,Drug delivery ,medicine ,Distribution (pharmacology) ,Radiology, Nuclear Medicine and imaging ,Original Article ,Nuclear medicine ,business ,medicine.drug - Abstract
Background To develop liposomes loaded with iodinated agents as nanosized CT/MRI bimodal contrast agents for monitoring liposome-mediated drug delivery. Methods Rhodamine-labeled iodixanol (VisipaqueTM)-loaded liposomes (IX-lipo) were prepared and tested for their properties as a diamagnetic CEST contrast agent in vitro. Mice bearing subcutaneous CT26 colon tumors were injected i.v. with 1 g/kg (535 mg iodine/kg) IX-lipo, and in vivo CT and CEST MR images were acquired on day 3. CT and CEST MR images were also acquired for tumor-bearing mice co-injected with IX-lipo and tumor necrosis factor (TNF-α). Results In addition to CT contrast, IX-lipo exhibited a strong CEST contrast similar to its non-liposomal form, with a detectability of ~2 nM per liposome. Both CT imaging and CEST MRI showed that i.v. injection of IX-lipo resulted in a rim enhancement of CT26 tumors with a heterogeneous central distribution. In contrast, co-injection of TNF-α caused a significantly augmented CT/MRI contrast in the tumor center. The intratumoral biodistribution of IX-lipo correlated well to the rhodamine patterns observed with fluorescence microscopy. Conclusions We have developed a CT/MRI bimodal imaging approach for monitoring the delivery and biodistribution of liposomes by loading them with the clinically approved X-ray/CT contrast agent iodixanol. Our approach may be easily adapted for other-FDA approved iodinated agents and thus has great translational potential.
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- 2019
11. Noninvasive Targeted Transcranial Neuromodulation via Focused Ultrasound Gated Drug Release from Nanoemulsions
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Randall A. Meyer, Kelly R. Rhodes, Martin G. Pomper, Jordan J. Green, Keyvan Farahani, Nicholas Ellens, Raag D. Airan, and Shilpa D. Kadam
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0301 basic medicine ,Letter ,Bioengineering ,Focused ultrasound ,03 medical and health sciences ,0302 clinical medicine ,Seizures ,Medicine ,Animals ,General Materials Science ,Tissue Distribution ,Propofol ,Anesthetics ,Drug Carriers ,Fluorocarbons ,Neurotransmitter Agents ,Clinical neuroscience ,business.industry ,Neuromodulation ,gated drug release ,Mechanical Engineering ,Optical Imaging ,Brain ,General Chemistry ,Condensed Matter Physics ,Biocompatible material ,Magnetic Resonance Imaging ,Neuromodulation (medicine) ,Rats ,Drug Liberation ,030104 developmental biology ,Ultrasonic Waves ,Blood-Brain Barrier ,Drug release ,focused ultrasound ,Nanoparticles ,Emulsions ,business ,030217 neurology & neurosurgery ,Biomedical engineering - Abstract
Targeted, noninvasive neuromodulation of the brain of an otherwise awake subject could revolutionize both basic and clinical neuroscience. Toward this goal, we have developed nanoparticles that allow noninvasive uncaging of a neuromodulatory drug, in this case the small molecule anesthetic propofol, upon the application of focused ultrasound. These nanoparticles are composed of biodegradable and biocompatible constituents and are activated using sonication parameters that are readily achievable by current clinical transcranial focused ultrasound systems. These particles are potent enough that their activation can silence seizures in an acute rat seizure model. Notably, there is no evidence of brain parenchymal damage or blood-brain barrier opening with their use. Further development of these particles promises noninvasive, focal, and image-guided clinical neuromodulation along a variety of pharmacological axes.
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- 2017
12. MR-Guided Delivery of Hydrophilic Molecular Imaging Agents Across the Blood-Brain Barrier Through Focused Ultrasound
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Keyvan Farahani, Yuchuan Wang, Martin G. Pomper, Nicholas Ellens, Ronnie C. Mease, Raag D. Airan, and Catherine A. Foss
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Glutamate Carboxypeptidase II ,0301 basic medicine ,Cancer Research ,Pathology ,medicine.medical_specialty ,Central nervous system ,Pharmacology ,Blood–brain barrier ,Fluorescence ,Article ,03 medical and health sciences ,0302 clinical medicine ,Glutamates ,Positron Emission Tomography Computed Tomography ,Glutamate carboxypeptidase II ,medicine ,Animals ,Urea ,Radiology, Nuclear Medicine and imaging ,Ultrasonography ,medicine.diagnostic_test ,Chemistry ,Lysine ,Brain ,Transporter ,Magnetic resonance imaging ,Ligand (biochemistry) ,Magnetic Resonance Imaging ,Rats, Inbred F344 ,Molecular Imaging ,030104 developmental biology ,medicine.anatomical_structure ,Oncology ,Blood-Brain Barrier ,Positron emission tomography ,030220 oncology & carcinogenesis ,Antigens, Surface ,Autoradiography ,Female ,Molecular imaging ,Hydrophobic and Hydrophilic Interactions - Abstract
A wide variety of hydrophilic imaging and therapeutic agents are unable to gain access to the central nervous system (CNS) due to the blood-brain barrier (BBB). In particular, unless a particular transporter exists that may transport the agent across the BBB, most agents that are larger than 500 Da or that are hydrophilic will be excluded by the BBB. Glutamate carboxypeptidase II (GCPII), also known as the prostate-specific membrane antigen (PSMA) in the periphery, has been implicated in various neuropsychiatric conditions. As all agents that target GCPII are hydrophilic and thereby excluded from the CNS, we used GCPII as a platform for demonstrating our MR-guided focused ultrasound (MRgFUS) technique for delivery of GCPII/PSMA-specific imaging agents to the brain. Female rats underwent MRgFUS-mediated opening of the BBB. After opening of the BBB, either a radio- or fluorescently labeled ureido-based ligand for GCPII/PSMA was administered intravenously. Brain uptake was assessed for 2-(3-{1-carboxy-5-[(6-[18F]fluoro-pyridine-3-carbonyl)-amino]-pentyl}-ureido)-pentanedioic acid ([18F]DCFPyL) and YC-27, two compounds known to bind GCPII/PSMA with high affinity, using positron emission tomography (PET) and near-infrared fluorescence (NIRF) imaging, respectively. Specificity of ligand binding to GCPII/PSMA in the brain was determined with co-administration of a molar excess of ZJ-43, a compound of the same chemical class but different structure from either [18F]DCFPyL or YC-27, which competes for GCPII/PSMA binding. Dynamic PET imaging using [18F]DCFPyL demonstrated that target uptake reached a plateau by ∼1 h after radiotracer administration, with target/background ratios continuing to increase throughout the course of imaging, from a ratio of ∼4:1 at 45 min to ∼7:1 by 80 min. NIRF imaging likewise demonstrated delivery of YC-27 to the brain, with clear visualization of tracer in the brain at 24 h. Tissue uptake of both ligands was greatly diminished by ZJ-43 co-administration, establishing specificity of binding of each to GCPII/PSMA. On gross and histological examination, animals showed no evidence for hemorrhage or other deleterious consequences of MRgFUS. MRgFUS provided safe opening of the BBB to enable specific delivery of two hydrophilic agents to target tissues within the brain. This platform might facilitate imaging and therapy using a variety of agents that have heretofore been excluded from the CNS.
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- 2016
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13. Factors affecting characterization and localization of interindividual differences in functional connectivity using MRI
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Brian Caffo, Haris I. Sair, Jay J. Pillai, Joshua T. Vogelstein, Raag D. Airan, and James J. Pekar
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0301 basic medicine ,Communication ,Radiological and Ultrasound Technology ,Resting state fMRI ,business.industry ,Computer science ,Pattern recognition ,Variance (accounting) ,03 medical and health sciences ,Identification (information) ,030104 developmental biology ,0302 clinical medicine ,Neurology ,Region of interest ,Functional neuroimaging ,Metric (mathematics) ,Radiology, Nuclear Medicine and imaging ,Neurology (clinical) ,Artificial intelligence ,Anatomy ,business ,Set (psychology) ,030217 neurology & neurosurgery ,Default mode network - Abstract
Much recent attention has been paid to quantifying anatomic and functional neuroimaging on the individual subject level. For optimal individual subject characterization, specific acquisition and analysis features need to be identified that maximize interindividual variability while concomitantly minimizing intra-subject variability. We delineate the effect of various acquisition parameters (length of acquisition, sampling frequency) and analysis methods (time course extraction, region of interest parcellation, and thresholding of connectivity-derived network graphs) on characterizing individual subject differentiation. We utilize a non-parametric statistical metric that quantifies the degree to which a parameter set allows this individual subject differentiation by both maximizing interindividual variance and minimizing intra-individual variance. We apply this metric to analysis of four publicly available test-retest resting-state fMRI (rs-fMRI) data sets. We find that for the question of maximizing individual differentiation, (i) for increasing sampling, there is a relative tradeoff between increased sampling frequency and increased acquisition time; (ii) for the sizes of the interrogated data sets, only 3-4 min of acquisition time was sufficient to maximally differentiate each subject with an algorithm that utilized no a priori information regarding subject identification; and (iii) brain regions that most contribute to this individual subject characterization lie in the default mode, attention, and executive control networks. These findings may guide optimal rs-fMRI experiment design and may elucidate the neural bases for subject-to-subject differences. Hum Brain Mapp 37:1986-1997, 2016. © 2016 Wiley Periodicals, Inc.
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- 2016
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14. Noninvasive Ultrasonic Drug Uncaging Maps Whole-Brain Functional Networks
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Jeffrey B. Wang, Muna Aryal, Raag D. Airan, Daivik B. Vyas, and Qian Zhong
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0301 basic medicine ,Drug ,Male ,Computer science ,Brain activity and meditation ,media_common.quotation_subject ,Article ,Functional networks ,03 medical and health sciences ,0302 clinical medicine ,Animals ,Rats, Long-Evans ,Propofol ,media_common ,Anesthetics ,Brain Mapping ,business.industry ,General Neuroscience ,Ultrasound ,Brain ,Magnetic Resonance Imaging ,Rats ,Functional imaging ,Electrophysiology ,030104 developmental biology ,Ultrasonic Waves ,Drug delivery ,Nanoparticles ,Ultrasonic sensor ,Nerve Net ,business ,Neuroscience ,030217 neurology & neurosurgery - Abstract
Being able to noninvasively modulate brain activity, where and when an experimenter desires, with an immediate path toward human translation is a long-standing goal for neuroscience. To enable robust perturbation of brain activity while leveraging the ability of focused ultrasound to deliver energy to any point of the brain noninvasively, we have developed biocompatible and clinically translatable nanoparticles that allow ultrasound-induced uncaging of neuromodulatory drugs. Utilizing the anesthetic propofol, together with electrophysiological and imaging assays, we show that the neuromodulatory effect of ultrasonic drug uncaging is limited spatially and temporally by the size of the ultrasound focus, the sonication timing, and the pharmacokinetics of the uncaged drug. Moreover, we see secondary effects in brain regions anatomically distinct from and functionally connected to the sonicated region, indicating that ultrasonic drug uncaging could noninvasively map the changes in functional network connectivity associated with pharmacologic action at a particular brain target.
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- 2018
15. Neurovascular uncoupling in resting state fMRI demonstrated in patients with primary brain gliomas
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Haris I. Sair, Raag D. Airan, Shruti Agarwal, Noushin Yahyavi-Firouz-Abadi, and Jay J. Pillai
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Blood-oxygen-level dependent ,Resting state fMRI ,business.industry ,Brain tumor ,Neurovascular bundle ,medicine.disease ,computer.software_genre ,Somatosensory system ,behavioral disciplines and activities ,Brain gliomas ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,nervous system ,Voxel ,Medicine ,Radiology, Nuclear Medicine and imaging ,In patient ,business ,Neuroscience ,computer ,psychological phenomena and processes ,030217 neurology & neurosurgery - Abstract
Background To demonstrate that the problem of brain tumor-related neurovascular uncoupling (NVU) is a significant issue with respect to resting state blood oxygen level dependent (BOLD) functional MRI (rsfMRI) similar to task-based BOLD fMRI, in which signal detectability can be compromised by breakdown of normal neurovascular coupling. Methods We evaluated seven de novo brain tumor patients who underwent resting state fMRI as part of comprehensive clinical fMRI exams at 3 Tesla. For each of the seven patients who demonstrated evidence of NVU on task-based motor fMRI, we performed both an independent component analysis (ICA) and an atlas-based parcellation-based seed correlation analysis (SCA) of the resting state fMRI data. For each patient, ipsilesional (IL) and contralesional (CL) regions of interest (ROIs) comprising primary motor and somatosensory cortices were used to evaluate BOLD signal changes on Z score maps derived from both ICA and SCA analysis for evidence of NVU. A subsequent two-tailed t-test was performed to determine whether statistically significant differences between the two sides were present that were consistent with NVU. Results In seven patients, overall decreased BOLD signal (based on suprathreshold voxels in ICA and SCA-derived Z-score maps) was noted in IL compared with CL ROIs (P
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- 2015
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16. Natural Neural Projection Dynamics Underlying Social Behavior
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Stephan Lammel, Raag D. Airan, Karl Deisseroth, Julie J. Mirzabekov, Isaac Kauvar, Kay M. Tye, Kelly A. Zalocusky, Joel Finkelstein, Avishek Adhikari, Lisa A. Gunaydin, Polina Anikeeva, Lief E. Fenno, Robert C. Malenka, and Logan Grosenick
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Rhodopsin ,Dopamine ,1.1 Normal biological development and functioning ,Neurotransmitter systems ,Optogenetics ,Biology ,Nucleus accumbens ,ENCODE ,Basic Behavioral and Social Science ,Medical and Health Sciences ,General Biochemistry, Genetics and Molecular Biology ,Article ,Nucleus Accumbens ,Receptors, Dopamine ,Photometry ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Reward ,Underpinning research ,Neural Pathways ,Receptors ,Behavioral and Social Science ,medicine ,Animals ,Calcium Signaling ,Social Behavior ,030304 developmental biology ,Calcium signaling ,0303 health sciences ,Biochemistry, Genetics and Molecular Biology(all) ,Ventral Tegmental Area ,Neurosciences ,Biological Sciences ,Social relation ,Ventral tegmental area ,medicine.anatomical_structure ,Dopamine receptor ,Female ,Neuroscience ,030217 neurology & neurosurgery ,Developmental Biology - Abstract
SummarySocial interaction is a complex behavior essential for many species and is impaired in major neuropsychiatric disorders. Pharmacological studies have implicated certain neurotransmitter systems in social behavior, but circuit-level understanding of endogenous neural activity during social interaction is lacking. We therefore developed and applied a new methodology, termed fiber photometry, to optically record natural neural activity in genetically and connectivity-defined projections to elucidate the real-time role of specified pathways in mammalian behavior. Fiber photometry revealed that activity dynamics of a ventral tegmental area (VTA)-to-nucleus accumbens (NAc) projection could encode and predict key features of social, but not novel object, interaction. Consistent with this observation, optogenetic control of cells specifically contributing to this projection was sufficient to modulate social behavior, which was mediated by type 1 dopamine receptor signaling downstream in the NAc. Direct observation of deep projection-specific activity in this way captures a fundamental and previously inaccessible dimension of mammalian circuit dynamics.
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- 2014
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17. Demonstration of Brain Tumor-Induced Neurovascular Uncoupling in Resting-State fMRI at Ultrahigh Field
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Jun Hua, Jay J. Pillai, Craig K. Jones, Haris I. Sair, Raag D. Airan, Hye Young Heo, Shruti Agarwal, James J. Pekar, Alessandro Olivi, and Martin A. Lindquist
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Adult ,Male ,Brain tumor ,Pilot Projects ,Motor Activity ,computer.software_genre ,Brain mapping ,behavioral disciplines and activities ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Region of interest ,Voxel ,medicine ,Humans ,Brain Mapping ,medicine.diagnostic_test ,Resting state fMRI ,Brain Neoplasms ,General Neuroscience ,Communication ,Brain ,Magnetic resonance imaging ,medicine.disease ,Neurovascular bundle ,Magnetic Resonance Imaging ,Oxygen ,nervous system ,Neurovascular Coupling ,Sensorimotor Cortex ,Functional magnetic resonance imaging ,Psychology ,computer ,Neuroscience ,030217 neurology & neurosurgery ,psychological phenomena and processes - Abstract
To demonstrate in a small case series for the first time the phenomenon of brain tumor-related neurovascular uncoupling (NVU) in resting-state blood oxygen level-dependent (BOLD) functional magnetic resonance imaging (fMRI) at ultrahigh field (7T). Two de novo (i.e., untreated) brain tumor patients underwent both BOLD resting-state fMRI (rsfMRI) on a 7T MRI system and motor task-based BOLD fMRI at 3T. Ipsilesional (i.e., ipsilateral to tumor or IL) and contralesional (i.e., contralateral to tumor or CL) region of interest (ROI) analysis was performed on both 3T motor task-related general linear model-derived activation maps and on 7T rsfMRI independent component analysis (ICA)-derived sensorimotor network maps for each case. Asymmetry scores (ASs) were computed based on numbers of suprathreshold voxels in the IL and CL ROIs. In each patient, ASs derived from ROI analysis of suprathreshold voxels in IL and CL ROIs in task-related activation maps and rsfMRI ICA-derived sensorimotor component maps indicate greater number of suprathreshold voxels in contralesional than ipsilesional sensorimotor cortex in both maps. In patient 1, an AS of 0.2 was obtained from the suprathreshold Z-score spectrum (voxels with Z-scores >5.0) of the task-based activation map and AS of 1.0 was obtained from the suprathreshold Z-score spectrum (Z-scores >5.0) of the ICA-derived sensorimotor component map. Similarly, in patient 2, an AS of 1.0 was obtained from the suprathreshold Z-score spectrum (Z-scores >5.0) of the task-based activation map and an AS of 1.0 was obtained from the suprathreshold Z-score spectrum (Z-scores >5.0) of the ICA-derived sensorimotor component map. Overall, decreased BOLD signal was noted in IL compared with CL ROIs on both task-based activation maps and ultrahigh field resting-state maps, indicating the presence of NVU. We have demonstrated evidence of NVU on ultrahigh field 7T rsfMRI comparable with the findings on standard 3T motor task-based fMRI in both cases.
- Published
- 2016
18. Presurgical brain mapping of the language network in patients with brain tumors using resting‐state fMRI: Comparison with task fMRI
- Author
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Martin A. Lindquist, Ann S. Choe, Noushin Yahyavi-Firouz-Abadi, Sachin K. Gujar, Brian Caffo, Jay J. Pillai, Jarunee Intrapiromkul, Haris I. Sair, Shruti Agarwal, Vince D. Calhoun, and Raag D. Airan
- Subjects
Adult ,Male ,medicine.medical_specialty ,Adolescent ,Concordance ,Rest ,Brain tumor ,Audiology ,Neuropsychological Tests ,Brain mapping ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,Young Adult ,0302 clinical medicine ,Mental Processes ,Sørensen–Dice coefficient ,Linear regression ,Preoperative Care ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Research Articles ,Aged ,Language ,Communication ,Analysis of Variance ,Brain Mapping ,Radiological and Ultrasound Technology ,Resting state fMRI ,business.industry ,Brain Neoplasms ,Brain ,Middle Aged ,medicine.disease ,Independent component analysis ,Magnetic Resonance Imaging ,Neurology ,Linear Models ,Female ,Neurology (clinical) ,Analysis of variance ,Anatomy ,business ,Psychology ,030217 neurology & neurosurgery ,Software - Abstract
Purpose To compare language networks derived from resting-state fMRI (rs-fMRI) with task-fMRI in patients with brain tumors and investigate variables that affect rs-fMRI vs task-fMRI concordance. Materials and Methods Independent component analysis (ICA) of rs-fMRI was performed with 20, 30, 40, and 50 target components (ICA20 to ICA50) and language networks identified for patients presenting for presurgical fMRI mapping between 1/1/2009 and 7/1/2015. 49 patients were analyzed fulfilling criteria for presence of brain tumors, no prior brain surgery, and adequate task-fMRI performance. Rs-vs-task-fMRI concordance was measured using Dice coefficients across varying fMRI thresholds before and after noise removal. Multi-thresholded Dice coefficient volume under the surface (DiceVUS) and maximum Dice coefficient (MaxDice) were calculated. One-way Analysis of Variance (ANOVA) was performed to determine significance of DiceVUS and MaxDice between the four ICA order groups. Age, Sex, Handedness, Tumor Side, Tumor Size, WHO Grade, number of scrubbed volumes, image intensity root mean square (iRMS), and mean framewise displacement (FD) were used as predictors for VUS in a linear regression. Results Artificial elevation of rs-fMRI vs task-fMRI concordance is seen at low thresholds due to noise. Noise-removed group-mean DiceVUS and MaxDice improved as ICA order increased, however ANOVA demonstrated no statistically significant difference between the four groups. Linear regression demonstrated an association between iRMS and DiceVUS for ICA30-50, and iRMS and MaxDice for ICA50. Conclusion Overall there is moderate group level rs-vs-task fMRI language network concordance, however substantial subject-level variability exists; iRMS may be used to determine reliability of rs-fMRI derived language networks. Hum Brain Mapp, 2015. © 2015 Wiley Periodicals, Inc.
- Published
- 2015
19. Neuromodulation with nanoparticles
- Author
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Raag D. Airan
- Subjects
Deep brain stimulation ,medicine.medical_treatment ,02 engineering and technology ,Optogenetics ,Light delivery ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,Drug Delivery Systems ,0302 clinical medicine ,Seizures ,Animals ,Humans ,Medicine ,Ultrasonics ,Propofol ,Neurotransmitter Agents ,Multidisciplinary ,Transcranial direct-current stimulation ,business.industry ,Brain ,021001 nanoscience & nanotechnology ,Depth of penetration ,Neuromodulation (medicine) ,Rats ,Transcranial magnetic stimulation ,Nanoparticles ,0210 nano-technology ,business ,Spatial extent ,Neuroscience - Abstract
Current strategies for clinical neuromodulation are limited by either high invasiveness, low precision, or poor depth of penetration. Deep brain stimulation (DBS) and other electrical strategies for deep brain neuromodulation necessitate the use of invasive device placement. Similarly, optogenetic interventions generally require the placement of a fiber-optic cable into the tissue for light delivery and would necessitate gene therapy. Noninvasive techniques for electrical neuromodulation, such as transcranial magnetic stimulation (TMS) or transcranial direct current stimulation (tDCS), on the other hand, have an overly broad spatial extent and limited depth of penetration.
- Published
- 2017
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