1. Implementation of a gene panel for genetic diagnosis of primary ciliary dyskinesia
- Author
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Alba Torrent-Vernetta, Inés de Mir Messa, Silvia Castillo-Corullón, Sandra Rovira-Amigo, Amparo Escribano, Marta Garrido-Pontnou, Esther Amengual Pieras, Óscar Asensio de la Cruz, Ignacio Iglesias-Serrano, Noelia Baz-Redón, Mónica Fernández-Cancio, Eduardo F. Tizzano, Ana Reula, Rosanel Amaro-Rodríguez, Carlos Martín de Vicente, Silvia Gartner, Gerardo Vizmanos-Lamotte, Francisco Dasí, Eva Polverino, Núria Camats-Tarruella, María del Mar Martínez-Colls, Elena García-Arumí, Ida Paramonov, Antonio Moreno-Galdó, Miguel Armengot-Carceller, M. Araceli Caballero-Rabasco, María Antolín, and Maria Cols-Roig
- Subjects
business.industry ,General Medicine ,medicine.disease ,Compound heterozygosity ,Bioinformatics ,03 medical and health sciences ,0302 clinical medicine ,030228 respiratory system ,Gene panel ,Cohort ,otorhinolaryngologic diseases ,Medicine ,Genetic diagnosis ,business ,Gene ,Primary ciliary dyskinesia - Abstract
Introduction Primary ciliary dyskinesia (PCD) is characterized by an alteration in the ciliary structure causing difficulty in the clearance of respiratory secretions. Diagnosis is complex and based on a combination of techniques. The objective of this study was to design a gene panel including all known causative genes, and to corroborate their diagnostic utility in a cohort of Spanish patients. Methods This was a multicenter cross-sectional study of patients with a high suspicion of PCD according to European Respiratory Society criteria. We designed a gene panel for massive sequencing using SeqCap EZ capture technology that included 44 genes associated with PCD. Results We included 79 patients, 53 of whom had a diagnosis of confirmed or highly probable PCD. The sensitivity of the gene panel was 81.1%, with a specificity of 100%. Candidate variants were found in some of the genes of the panel in 43 patients with PCD, 51.2% (22/43) of whom were homozygotes and 48.8% (21/43) compound heterozygotes. The most common causative genes were DNAH5 and CCDC39. We found 52 different variants, 36 of which were not previously described in the literature. Conclusions The design and implementation of a tailored gene panel produces a high yield in the genetic diagnosis of PCD. This panel provides a better understanding of the causative factors involved in these patients and lays down the groundwork for future therapeutic approaches.
- Published
- 2021
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