1. Development of a combined RLEP/16S rRNA (RT) qPCR assay for the detection of viable M. leprae from nasal swab samples
- Author
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Malkin Saar, Magdalena Wagner, Thomas Löscher, Gisela Bretzel, Marcus Beissner, Anna Woestemeier, Issaka Maman, Kossi Badziklou, Charlotte Amedifou, Abiba Banla Kere, Basile Kobara, Komi Amekuse, Franz Xaver Wiedemann, and Karl-Heinz Herbinger
- Subjects
0301 basic medicine ,0302 clinical medicine ,Medical microbiology ,RNA, Ribosomal, 16S ,030212 general & internal medicine ,Child ,Mycobacterium leprae ,Nose ,Aged, 80 and over ,biology ,Middle Aged ,Infectious Diseases ,medicine.anatomical_structure ,Technical Advance ,Viability ,Nasal Swab ,Child, Preschool ,Togo ,Leprosy, Multibacillary ,Leprosy ,Nasal Cavity ,Adult ,DNA, Bacterial ,medicine.medical_specialty ,Adolescent ,030106 microbiology ,Real-Time Polymerase Chain Reaction ,Sensitivity and Specificity ,lcsh:Infectious and parasitic diseases ,Microbiology ,Young Adult ,03 medical and health sciences ,medicine ,Humans ,16 rRNA RT qPCR ,lcsh:RC109-216 ,Nasal swab samples ,Aged ,RLEP qPCR ,Bacillary load ,business.industry ,Reproducibility of Results ,Ribosomal RNA ,16S ribosomal RNA ,medicine.disease ,biology.organism_classification ,Parasitology ,business - Abstract
Background Leprosy continues to be a health problem in endemic areas. More than 200,000 new cases of leprosy per year suggest that transmission of the disease is still ongoing, presumably as airborne infection through nasal droplets. Late diagnosis supports continued transmission and increases the individual risk for functional disabilities. Laboratory tools are considered beneficial to facilitate early detection and clinical assessment of cases. The aim of this study was to validate molecular tools allowing detection, quantification and assessment of viability of M. leprae from nasal swab samples which are easy to obtain without the need of any invasive procedures. Methods Validation of two real-time PCRs detecting M. leprae DNA (RLEP qPCR) and RNA (16S rRNA RT qPCR) was conducted on “must not detect”/“must detect” samples and 160 pre-treatment nasal swab samples from 20 clinically diagnosed multibacillary (MB) leprosy patients from Togo. Results Both assays were 100% M. leprae specific and showed analytical sensitivities of three templates each. Out of 20 clinically diagnosed MB leprosy patients, 15 (75.0%) had a positive RLEP qPCR result from nasal swab samples. The 16S rRNA RT qPCR detected viable bacilli in nasal swab samples of ten out of these 15 RLEP positive patients (66.7%). Conclusion The combined RLEP/16S rRNA (RT) qPCR assay provides a sensitive and specific tool to determine the bacterial load and viability of M. leprae from nasal swab samples and is applicable for early diagnosis, monitoring treatment response and investigating the role of nasal carriage of M. leprae in human-to-human transmission through aerosol infection. Electronic supplementary material The online version of this article (10.1186/s12879-019-4349-9) contains supplementary material, which is available to authorized users.
- Published
- 2019
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