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Due to increasing algae bloom occurrence and water degradation on a global scale, there is a demand for water quality monitoring systems based on remote sensing imagery. This paper describes the scientific, theoretical, and methodological background for creating a cloud-computing interface on Google Earth Engine (GEE) which allows end-users to access algae bloom related products with high spatial (30 m) and temporal (~5 day) resolution. The proposed methodology uses Sentinel-2 images corrected for atmospheric and sun-glint effects to generate an image collection of the Normalized Difference Chlorophyll-a Index (NDCI) for the entire time-series. NDCI is used to estimate both Chl-a concentration, based on a non-linear fitting model, and Trophic State Index (TSI), based on a tree-decision model classification into five classes. Once the Chl-a and TSI algorithms had been calibrated and validated they were implemented in GEE as an Earth Engine App, entitled Algae Bloom Monitoring Application (AlgaeMAp). AlgaeMAp is the first online platform built within the GEE platform that offers high spatial resolution of water quality parameters. The App benefits from the huge processing capability of GEE that allows any user with internet access to easily extract detailed spatial (30 m) and long temporal Chl-a and TSI information (from August 2015 and with images every 5 days) throughout the most important reservoirs in the State of São Paulo/Brazil. The application will be adapted to extend to other relevant areas in Latin America.

Remote sensing imagery are fundamental to increasing the knowledge about sediment dynamics in the middle-lower Amazon floodplains. Moreover, they can help to understand both how climate change and how land use and land cover changes impact the sediment exchange between the Amazon River and floodplain lakes in this important and complex ecosystem. This study investigates the suitability of Landsat-8 and Sentinel-2 spectral characteristics in retrieving total (TSS) and inorganic (TSI) suspended sediments on a set of Amazon floodplain lakes in the middle-lower Amazon basin using in situ Remote Sensing Reflectance (Rrs) measurements to simulate Landsat 8/OLI (Operational Land Imager) and Sentinel 2/MSI (Multispectral Instrument) bands and to calibrate/validate several TSS and TSI empirical algorithms. The calibration was based on the Monte Carlo Simulation carried out for the following datasets: (1) All-Dataset, consisting of all the data acquired during four field campaigns at five lakes spread over the lower Amazon floodplain (n = 94); (2) Campaign-Dataset including samples acquired in a specific hydrograph phase (season) in all lakes. As sample size varied from one season to the other, n varied from 18 to 31; (3) Lake-Dataset including samples acquired in all seasons at a given lake with n also varying from 17 to 67 for each lake. The calibrated models were, then, applied to OLI and MSI scenes acquired in August 2017. The performance of three atmospheric correction algorithms was also assessed for both OLI (6S, ACOLITE, and L8SR) and MSI (6S, ACOLITE, and Sen2Cor) images. The impact of glint correction on atmosphere-corrected image performance was assessed against in situ glint-corrected Rrs measurements. After glint correction, the L8SR and 6S atmospheric correction performed better with the OLI and MSI sensors, respectively (Mean Absolute Percentage Error (MAPE) = 16.68% and 14.38%) considering the entire set of bands. However, for a given single band, different methods have different performances. The validated TSI and TSS satellite estimates showed that both in situ TSI and TSS algorithms provided reliable estimates, having the best results for the green OLI band (561 nm) and MSI red-edge band (705 nm) (MAPE < 21%). Moreover, the findings indicate that the OLI and MSI models provided similar errors, which support the use of both sensors as a virtual constellation for the TSS and TSI estimate over an Amazon floodplain. These results demonstrate the applicability of the calibration/validation techniques developed for the empirical modeling of suspended sediments in lower Amazon floodplain lakes using medium-resolution sensors.

Wetland inventory maps are essential information for the conservation and management of natural wetland areas. The classification framework is crucial for successful mapping of complex wetlands, including the model selection, input variables and training procedures. In this context, deep neural network (DNN) is a powerful technique for remote sensing image classification, but this model application for wetland mapping has not been discussed in the previous literature, especially using commercial WorldView-3 data. This study developed a new framework for wetland mapping using DNN algorithm and WorldView-3 image in the Millrace Flats Wildlife Management Area, Iowa, USA. The study area has several wetlands with a variety of shapes and sizes, and the minimum mapping unit was defined as 20 m2 (0.002 ha). A set of potential variables was derived from WorldView-3 and auxiliary LiDAR data, and a feature selection procedure using principal components analysis (PCA) was used to identify the most important variables for wetland classification. Furthermore, traditional machine learning methods (support vector machine, random forest and k-nearest neighbor) were also implemented for the comparison of results. In general, the results show that DNN achieved satisfactory results in the study area (overall accuracy = 93.33 %), and we observed a high spatial overlap between reference and classified wetland polygons (Jaccard index ∼0.8). Our results confirm that PCA-based feature selection was effective in the optimization of DNN performance, and vegetation and textural indices were the most informative variables. In addition, the comparison of results indicated that DNN classification achieved relatively similar accuracies to other methods. The total classification errors vary from 0.104 to 0.111 among the methods, and the overlapped areas between reference and classified polygons range between 87.93 and 93.33 %. Finally, the findings of this study have three main implications. First, the integration of DNN model and WorldView-3 image is useful for wetland mapping at 1.2-m, but DNN results did not outperform other methods in this study area. Second, the feature selection was important for model performance, and the combination of most relevant input parameters contributes to the success of all tested models. Third, the spatial resolution of WorldView-3 is appropriate to preserve the shape and extent of small wetlands, while the application of medium resolution image (30-m) has a negative impact on the accurate delineation of these areas. Since commercial satellite data are becoming more affordable for remote sensing users, this study provides a framework that can be utilized to integrate very high-resolution imagery and deep learning in the classification of complex wetland areas.

Using remote sensing for monitoring trophic states of inland waters relies on the calibration of chlorophyll-a (chl-a) bio-optical algorithms. One of the main limiting factors of calibrating those algorithms is that they cannot accurately cope with the wide chl-a concentration ranges in optically complex waters subject to different trophic states. Thus, this study proposes an optical hybrid chl-a algorithm (OHA), which is a combined framework of algorithms for specific chl-a concentration ranges. The study area is Ibitinga Reservoir characterized by high spatiotemporal variability of chl-a concentrations (3–1000 mg/m3). We took the following steps to address this issue: (1) we defined optical classes of specific chl-a concentration ranges using Spectral Angle Mapper (SAM); (2) we calibrated/validated chl-a bio-optical algorithms for each trophic class using simulated Sentinel-2 MSI (Multispectral Instrument) bands; (3) and we applied a decision tree classifier in MSI/Sentinel-2 image to detect the optical classes and to switch to the suitable algorithm for the given class. The results showed that three optical classes represent different ranges of chl-a concentration: class 1 varies 2.89–22.83 mg/m3, class 2 varies 19.51–87.63 mg/m3, and class 3 varies 75.89–938.97 mg/m3. The best algorithms for trophic classes 1, 2, and 3 are the 3-band (R2 = 0.78; MAPE - Mean Absolute Percentage Error = 34.36%), slope (R2 = 0.93; MAPE = 23.35%), and 2-band (R2 = 0.98; MAPE = 20.12%), respectively. The decision tree classifier showed an accuracy of 95% for detecting SAM’s optical trophic classes. The overall performance of OHA was satisfactory (R2 = 0.98; MAPE = 26.33%) using in situ data but reduced in the Sentinel-2 image (R2 = 0.42; MAPE = 28.32%) due to the temporal gap between matchups and the variability in reservoir hydrodynamics. In summary, OHA proved to be a viable method for estimating chl-a concentration in Ibitinga Reservoir and the extension of this framework allowed a more precise chl-a estimate in eutrophic inland waters.