1. Dip Sticks Embedding Molecular Beacon-Functionalized Core–Mesoporous Shell Particles for the Rapid On-Site Detection of Microbiological Fuel Contamination
- Author
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Raúl Gotor, Jérémy Bell, Charlie Tobias, Estela Climent, Pedro M. Martin-Sanchez, and Knut Rurack
- Subjects
Bioengineering ,02 engineering and technology ,01 natural sciences ,Biofouling ,Molecular beacon ,RNA, Ribosomal, 16S ,Instrumentation ,Fluid Flow and Transfer Processes ,Bacteria ,biology ,Chemistry ,Process Chemistry and Technology ,010401 analytical chemistry ,Fungi ,DNA ,Mesoporous silica ,Contamination ,021001 nanoscience & nanotechnology ,biology.organism_classification ,Fluorescence ,0104 chemical sciences ,genomic DNA ,Chemical engineering ,0210 nano-technology ,Mesoporous material - Abstract
Microbial contamination of fuels by fungi and bacteria presents risks of corrosion and fuel system fouling. In this work, a rapid test for the determination of microbial genomic DNA from aqueous fuel extracts is presented. It combines test strips coated with polystyrene core/mesoporous silica shell particles, to the surface of which modified fluorescent molecular beacons are covalently grafted, with a smartphone detection system. In the hairpin loop, the beacons incorporate a target sequence highly conserved in all bacteria, corresponding to a fragment of the 16S ribosomal RNA gene, which is also present to a significant extent in the 18S rRNA gene of fungi, allowing for broadband microbial detection. In the developed assay, the presence of genomic DNA extracts from bacteria and fungi down to ca. 20-50 μg L-1 induced a distinct fluorescence response. The optical read-out was adapted for on-site monitoring by combining a 3D-printed case with a conventional smartphone, taking advantage of the sensitivity of contemporary complementary metal oxide semiconductor (CMOS) detectors. Such an embedded assembly allowed to detect microbial genomic DNA in aqueous extracts down to ca. 0.2-0.7 mg L-1 and presents an important step toward the on-site uncovering of fuel contamination in a rapid and simple fashion.
- Published
- 2020
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