Search

Under natural conditions, plants constantly encounter various biotic and abiotic factors, which can potentially restrict plant growth and development and even limit crop productivity. Among various abiotic factors affecting plant photosynthesis, light serves as an important factor that drives carbon metabolism in plants and supports life on earth. The two components of light (light quality and light intensity) greatly affect plant photosynthesis and other plant’s morphological, physiological and biochemical parameters. The response of plants to different spectral radiations and intensities differs in various species and also depends on growing conditions. To date, much research has been conducted regarding how different spectral radiations of varying intensity can affect plant growth and development. This review is an effort to briefly summarize the available information on the effects of light components on various plant parameters such as stem and leaf morphology and anatomy, stomatal development, photosynthetic apparatus, pigment composition, reactive oxygen species (ROS) production, antioxidants, and hormone production.

Background Bioinformatics tools are of great significance and are used in different spheres of life sciences. There are wide variety of tools available to perform primary analysis of DNA and protein but most of them are available on different platforms and many remain undetected. Accessing these tools separately to perform individual task is uneconomical and inefficient. Objective Our aim is to bring different bioinformatics models on a single platform to ameliorate scientific research. Hence, our objective is to make a tool for comprehensive DNA and protein analysis. Methods To develop a reliable, straight-forward and standalone desktop application we used state of the art python packages and libraries. Bioinformatics Mini Toolbox (BMT) is combination of seven tools including FastqTrimmer, Gene Prediction, DNA Analysis, Translation, Protein analysis and Pairwise and Multiple alignment. Results FastqTrimmer assists in quality assurance of NGS data. Gene prediction predicts the genes by homology from novel genome on the basis of reference sequence. Protein analysis and DNA analysis calculates physiochemical properties of nucleotide and protein sequences, respectively. Translation translates the DNA sequence into six open reading frames. Pairwise alignment performs pairwise global and local alignment of DNA and protein sequences on the basis or multiple matrices. Multiple alignment aligns multiple sequences and generates a phylogenetic tree. Conclusion We developed a tool for comprehensive DNA and protein analysis. The link to download BMT is https://github.com/nasiriqbal012/BMT_SETUP.git.

Waste production is associated with human inhabitation and its rate is increasing over time. Globally, the major proportion of waste is disposed of through landfilling and open dumping, which is en...

A half-root stress is a half portion of the root system exposed to treatment while the remaining half portion kept under normal conditions. A half-root stress including half-root drought stress, half-root nutrient stress, and half-root salinity stress has become a general approach to improve plant performance and adaptability. Plants produce some chemical signals in stressed part of root, and other parts sense these signals to improve the acclimation and adaptive responses to environmental stresses. Plants adapt the compensatory functions and discriminate the systemic and local regulatory mechanisms, but the understanding of these mechanisms is controversial. Chemical signals (Abscisic acid, sap pH, cytokinins, content of malate, amino acid, and ureide) have been involved in root to shoot signaling under half-root stress. Furthermore, naturally appeared half-root stress in intercropping systems could be an additional attribute of half-root stress approach. Therefore, much more study is required to elaborate its acceptability in intercropping. In this review, we summarized the current knowledge and identified some key future researches areas regarding half-root stress approach.

Without developing new agronomic practices, present rates of improvement in seed yields of cereal crops globally are insufficient to fulfil the estimated increasing food demand for 2050 and beyond. Intercropping is one of the agricultural practices that can lead to greater crop yields. However, there exists leaf redundancy for maize in intercropping systems, and the top canopy leaves shade more competent leaves at middle strata of maize plants. Therefore, this work aimed to elucidate the effect of leaf excision treatments in maize to understand the optimum leaf area of maize plants under a maize–soybean relay‐intercropping system (MSR) and a sole cropping system (SM). The effects of four‐leaf excision treatments (T₁, 0; T₂, 2; T₃, 4; T₄, 6 leaves excised from the top of maize plants until 7 days after silking) on light interception, leaf area index (LAI), photosynthetic characteristics, total biomass accumulation at blistering stage (BS), dough stage (DS) and physiological maturity (PM), and seed yield of maize were investigated through field experiments for 2 years under MSR and SM. Results showed that, under MSR and SM, as compared to control (T₁), optimum excision of leaves (T₂) from the top of maize plants significantly improved the light interception (by 25, 18 and 16% at BS, DS and PM, respectively) to lower strata leaves and accelerated the biomass partitioning to maize seeds (by 13 and 12% at DS and PM, respectively). Importantly, plants under T₂ exhibited higher green leaf area than control, that is, excision the top two leaves led to an increase in LAI at PM by 10%, suggesting that leaf senescence under T₂ was delayed which enhanced the photosynthetic rate at PM by 7% in 2017 and 6% in 2018. Relative to T₁, maize under T₂ produced 19 and 13% higher maize yield under MSR and SM, respectively, and relay‐cropped maize had 90% of SM seed yield. These results suggest that by manipulating the canopy structure of maize plants we can enhance the biomass accumulation and seed yield of maize crops under MSR and SM.

We selected four genotypes from the recombinant inbred lines based on their agronomic traits in terms of lodging resistance. Then, we investigated the morphological characteristics and stem carbohydrate accumulation of different soybean (Glycine max L.) genotypes under different light environments (normal light, low light and shading stress). Based upon metabolic accumulation of carbohydrates in the stem, we explored the reasons for the differences in stem strength of different soybean genotypes and expounded the relationship between accumulation and distribution of carbohydrates. Results of the present study showed that with the advancement of soybean growth period, the cellulose and lignin contents in soybean stem increased while the hemicellulose, sucrose and soluble sugars contents decreased. Compared with normal light conditions, the lignin, cellulose, soluble sugar and sucrose contents in the soybean plants under shading stress were reduced to different levels. Moreover, low light significantly reduced non-structural carbohydrate content in soybean stem while the lignin and cellulose contents were not significantly changed. The correlation analysis showed that there was a significant positive correlation among the stem snapping resistance, cellulose and lignin contents. The results showed that the stem strength was mainly determined by lignin and cellulose contents. The lignin content in the stem had a greater effect on the stem strength compared to cellulose. The xylose in soybean stem was also significantly reduced under the shading stress, which reduced lignin synthesis substrates. Under low light and shading stress, the minimum decrease in sucrose and structural carbohydrates content of a genotype (B23) was noticed indicating that B23 had high stem strength and increased decomposition of sucrose into cellulose synthesis. This trait of increased decomposition reduces the plant’s inefficient decomposition of sucrose thus most of the sucrose is used to synthesize cellulose. Conclusively, these results suggested that deposition of a relatively large amount of structural carbohydrates (e.g. lignin, cellulose, hemicellulose and monosaccharides) leads to thicker stem tissues which could be helpful to reduce lodging due to shading stress under multiple cropping systems.

Shades caused by neighboring tall plants in intercropping systems and weak sunlight are constraints in yield optimization. Shade influences many aspects of plant growth and development, leading to weak stems and susceptibility to lodging. The plant cell wall is composed of certain proteins that allow the walls to stretch out, a process called cell wall loosening. Shade affects anatomical, morphological, and physiological traits of plants, thus reducing the physical strength of the stem in crops by changing the loosening of cell walls. Flexibility of cells facilitates further modifications such as wall loosening. In addition, shade stress causes increased internode length, and reduced xylem synthesis and photosynthesis. In shaded plants, lignin deposition in vascular bundles and sclerenchyma cells of stems is decreased. Lignin is a light sensitive phenolic compound and shading decreases the transcript abundance of several phenolic compound (flavone and lignin) related genes. Shading significantly influences the metabolic activities of phenylalanine ammonia-lyase (PAL), peroxidase (POD), 4-coumarate: CoA ligase (4CL), and cinnamyl alcohol dehydrogenase (CAD) involved in lignin biosynthesis. Furthermore, suppression of lignin biosynthesis activities by abiotic stresses causes abnormal phenotypes such as collapsed xylem, bent stems, and growth retardation. In this review, the underlying mechanisms illustrate that under shading conditions reduced lignin content results in slender, weak, and unstable stems. The objective of this review is to elaborate lignin biosynthesis and its variability under stressful environmental conditions, especially in shade stress environments. The effects of shade on stem lignin metabolism are discussed on the morphogenetic, physiological, and proteomic levels.

Strip width management is a critical factor for producing higher crop yields in relay intercropping systems. A 2‐year field experiment was carried out during 2012 and 2013 to evaluate the effects of different strip width treatments on dry‐matter production, major‐nutrient (nitrogen, phosphorus, and potassium) uptake, and competition parameters of soybean and maize in relay intercropping system. The strip width (SW) treatments were 0.40, 0.40, and 0.40 m (SW1); 0.40, 0.40, and 0.50 m (SW2); 0.40, 0.40, and 0.60 m (SW3); and 0.40, 0.40, and 0.70 m (SW4) for soybean row spacing, maize row spacing, and spacing between soybean and maize rows, respectively. As compared to sole maize (SM) and sole soybean (SS), relay‐intercropped maize and soybean accumulated lower quantities of nitrogen, phosphorus, and potassium in all treatments. However, maize in SW1 accumulated higher nitrogen, phosphorus, and potassium than SW4 (9%, 9%, and 8% for nitrogen, phosphorus, and potassium, respectively). Soybean in SW3 accumulated 25% higher nitrogen, 33% higher phosphorus, and 24% higher potassium than in SW1. The improved nutrient accumulation in SW3 significantly increased the soybean dry matter by 19%, but slightly decreased the maize dry matter by 6% compared to SW1. Similarly, SW3 increased the competition ratio value of soybean (by 151%), but it reduced the competition ratio value of maize (by 171%) compared to SW1. On average, in SW3, relay‐cropped soybean produced 84% of SS seed yield and maize produced 98% of SM seed yield and achieved the land equivalent ratio of 1.8, demonstrating the highest level in the world. Overall, these results suggested that by selecting the appropriate strip width (SW3; 0.40 m for soybean row spacing, 0.40 m maize row spacing, and 0.60 m spacing between soybean and maize rows), we can increase the nutrient uptake (especially nitrogen, phosphorus, and potassium), dry‐matter accumulation, and seed yields of relay‐intercrop species under relay intercropping systems.

Traditional maize (Zea mays L.) and soybean (Glycine max (L) Merrill) intercropping practice cannot be adapted to modern agriculture due to low light use efficiency, radiation use efficiency, low comparative profits of soybeans and incompatibility with mechanization. However, a new type of maize and soybean intercropping system (MSIS) with high land equivalent ratio (LER) provides substantial benefits for small-land hold farmers worldwide. Our research team has done a wide range of research to suggest the appropriate planting geometry that ensures high yield and LER as high as 2.36, nutrient acquisition and mechanical operations in MSISs. Increase in the distance between soybean and maize rows and decrease in the spacing of maize narrow rows is useful for the high light interception for the short soybean in MSISs. This review concludes that MSIS has multifold and convincing results of LER and compatible with mechanization, while those practiced other than China still require technological advancements, agronomic measures and compatible mechanization to further explore its adaptability.

Sulphur (S) plays a significant role in determining seed yield and quality of oilseed crops. However, the effect of sulphur application on yield, sulphur uptake and concentration in sesame genotypes under rainfed conditions is still unclear. A two-year field trial was conducted during 2012 and 2013 to analyze the impact of four sulphur levels S1, 20 kg ha−1; S2, 30 kg ha−1; S3, 40 kg ha−1; S4, 50 kg ha−1 on capsules per plant (NCP), seeds per capsule (NSC), seed weight (SW), seed yield (SY), total sulphur uptake (TSU), sulphur concentration and quality parameters of four sesame genotypes (G1, SG-27; G2, SG-30; G3, SG-36; G4, SG-51). The results showed that all the sesame genotypes responded significantly to sulphur application for all the parameters, however, the level of response differed among genotypes. Maximum NCP, NSC, SW, SY, oil yield and superior quality of seeds were observed with G3. Among all the sulphur levels, S3 considerably increased the NCP, NSC, SW, seed yield (1529.9 kg ha−1 for 2012 and 1757.1 kg ha−1 for 2013), oil content (39.1% in 2012 and 39.4% in 2013) and oil yield (601.3 kg ha−1 for 2012 and 692.4 kg ha−1 for 2013) of sesame genotypes. These findings implied that sulphur application has the significant impact on the yield-related parameters and sesame genotypes responded positively to sulphur application. In addition, application of sulphur increased TSU and maximum TSU (39.7 kg ha−1) was noticed in G3 under treatment S3. The sulphur concentration in stem, leaf, capsule and seed varied significantly among all sesame genotypes. Higher content of sulphur in stem (17.4 mg g−1), leaf (10.7 mg g−1), capsule (11.4 mg g−1) and seed (8.6 mg g−1) was observed with G3 under treatment S3. However, decreasing trends were found for the accumulation of protein content (9.7%), palmitic acid (22.7%), stearic acid (15.2%) and linoleic acid (6.3%) while the accumulation of oleic acid (7.6%) was significantly increased from S1 to S4. These results suggested that by selecting the appropriate genotype and level of sulphur for sesame crop we can increase the seed yield and quality characters of sesame seeds under rainfed conditions.

Shading conditions adversely affect flower-number and pod-number of soybeans under maize-soybean relay-intercropping (MSR). Here we reveal that leaf-removal from maize-canopy improves the photosynthetically active radiation (PAR) transmittance and dry-matter production (DMP) of soybean (especially during the co-growth phase), and compensates the maize seed-yield loss by considerably increasing soybean seed-yield. In a two-year experiment with MSR, maize-plants were subjected to different leaf-removal treatments to increase the PAR-transmittance of soybean; removal of the topmost two-leaves (R2), four-leaves (R4), six-leaves (R6), with no-removal of leaves (R0). Leaf-removal treatments improved the PAR-transmittance, photosynthetic-rate, and morphological-characteristics of soybean under MSR. At 90 days after sowing, the dry-matter of pods, and seeds was increased by 25%, and 32%, respectively under R6 than R0. Importantly, enhanced PAR-transmittance and DMP under R6 enabled soybean to initiate a greater number of flowers 182.2 plant−1 compared to 142.7 plant−1 under R0, and it also decreased the flower-abscission (by 13%, from 54.9% under R0 to 47.6% under R6). These positive responses increased the pod-number by 49% and seed-number by 28% under R6 than R0. Overall, under R6, relay-intercropped soybean produced 78% of sole-soybean seed-yield, and relay-intercropped maize produced 81% of sole-maize seed-yield and achieved the land equivalent ratio of 1.59.

Background Maize-soybean relay-intercropping (MSR) is a famous system of crop production in developing countries. However, maize shading under this system directly affects the light quality and intensity of soybean canopy. This is a challenging scenario in which to implement the MSR system, in terms of varieties selection, planting pattern, and crop management since the duration of crop resource utilization clearly differs. Methods Therefore, this experiment aimed to elucidate the effect of leaf excising treatments from maize top to fully clarify the needs and balance of light quality and intensity of intercrop-soybean under MSR in field conditions. The effects of different leaf excising treatments (T0, no removal of leaves; T2, removal of two topmost leaves; T4, removal of four topmost leaves; T6, removal of six topmost leaves from maize plants were applied at first-trifoliate stage (V1) of soybean) on photosynthetically active radiation transmittance (PART), red to far-red ratio (R:FR), morphological and photosynthetic characteristics and total biomass production at second-trifoliate stage (V2), fifth-trifoliate stage (V5), and flowering-stage (R1) of soybean were investigated through field experiments for 2-years under MSR. Results As compared to T0, treatment T6 increased the PART and R:FR ratio at soybean canopy by 77% and 37% (V2), 70% and 34% (V5), and 41% and 36% (R1), respectively. This improved light environment in T6 considerably enhanced the leaf area index, SPAD values and photosynthetic rate of soybean plants by 66%, 25% and 49% at R1, respectively than T0. Similarly, relative to control, T6 also increased the stem diameter (by 29%) but decreased the plant height (by 23%) which in turn significantly increased stem breaking strength (by 87%) by reducing the lodging rate (by 59%) of soybean plants. Overall, under T6, relay-cropped soybean produced 78% of sole soybean seed-yield, and relay-cropped maize produced 81% of sole maize seed-yield. Our findings implied that by maintaining the optimum level of PART (from 60% to 80%) and R:FR ratio (0.9 to 1.1), we can improve morphological and photosynthetic characteristics of soybean plants in MSR. Therefore, more attention should be paid to the light environment when considering the sustainability of MSR via appropriate planting pattern selection.

Water deficiency significantly affects photosynthetic characteristics. However, there is little information about variations in antioxidant enzyme activities and photosynthetic characteristics of soybean under imbalanced water deficit conditions (WDC). We therefore investigated the changes in photosynthetic and chlorophyll fluorescence characteristics, total soluble protein, Rubisco activity (RA), and enzymatic activities of two soybean varieties subjected to four different types of imbalanced WDC under a split-root system. The results indicated that the response of both cultivars was significant for all the measured parameters and the degree of response differed between cultivars under imbalanced WDC. The maximum values of enzymatic activities (SOD, CAT, GR, APX, and POD), chlorophyll fluorescence (Fv/Fm, qP, ɸPSII, and ETR), proline, RA, and total soluble protein were obtained with a drought-tolerant cultivar (ND-12). Among imbalanced WDC, the enhanced net photosynthesis, transpiration, and stomatal conductance rates in T2 allowed the production of higher total soluble protein after 5 days of stress, which compensated for the negative effects of imbalanced WDC. Treatment T4 exhibited greater potential for proline accumulation than treatment T1 at 0, 1, 3, and 5 days after treatment, thus showing the severity of the water stress conditions. In addition, the chlorophyll fluorescence values of FvFm, ɸPSII, qP, and ETR decreased as the imbalanced WDC increased, with lower values noted under treatment T4. Soybean plants grown in imbalanced WDC (T2, T3, and T4) exhibited signs of oxidative stress such as decreased chlorophyll content. Nevertheless, soybean plants developed their antioxidative defense-mechanisms, including the accelerated activities of these enzymes. Comparatively, the leaves of soybean plants in T2 displayed lower antioxidative enzymes activities than the leaves of T4 plants showing that soybean plants experienced less WDC in T2 compared to in T4. We therefore suggest that appropriate soybean cultivars and T2 treatments could mitigate abiotic stresses under imbalanced WDC, especially in intercropping.

The assessment of seed vitality is a common challenge for phytologists, especially with the small amount of precious germplasms involved in breeding research. Researchers try to avoid the loss of precious samples as much as possible. A simple, rapid, and convenient method is urgently required to assess seed longevity or vitality without large dosages and tedious procedures. Therefore, in this study, a comprehensive, simple, very rapid, and convenient method based on 1H NMR profiling was developed to quantify the constituents in soybean seeds. Additionally, the general and individual partial least-squares discriminant analysis (PLS-DA) approach was used to analyze the vitality determination of black and yellow soybean germplasms, and the corresponding loadings scatter plot and difference analysis helped to identify the biomarkers in soybean seeds with varied seed vitalities. The result demonstrates that arginine, hypoxanthine, O-phosphocholine, and tryptophan are important biomarkers to assess the seed vitality of soybean. The detection of these biomarkers provides an approach for the assessment of soybean seed vitality.

A field microenvironment varies with intercropping ecological planting patterns, especially its light conditions. Due to light reflection and absorption by maize leaves, spectral irradiance, red/far-red (R/FR) ratio, and photosynthetic active radiation (PAR) of the soybean canopy are decreased in a maize–soybean intercropping system as compared to those in sole cropping. In this study, a metabolomics method was applied to analyze fatty acid metabolism of soybeans grown under an intercrop shading condition. The results indicate that the fatty acid contents of the intercropped soybean were significantly higher than those of the sole-cropped soybeans. As the shading effect increased, the soybean fatty acids content showed a rise and fall tendency. Moreover, the partial least-squares discriminant analysis (PLS-DA), Pearson correlation, and hierarchical clustering analysis (HCA) multivariate analyses showed a similar result. The results suggested that shading can manipulate soybean fatty acid metabolism in a maize–soybean strip intercropping system. Further, the metabolite profiling combined with multivariate statistical analysis can be used as a useful tool for identifying the metabolic links between fatty acid metabolites.

SUMMARYUnderstanding crop water use in mixed crops over sole cropping is vital for developing optimum water management systems for crop production. In this study, a two-year field experiment with typical maize (Zea mays L.) and soybean [Glycine max (L.) Merr.] relay strip intercropping (2:2 maize-to-soybean rows; 200 cm bandwidth) was carried out in the 2013 and 2014 growing seasons. The quantitative effects of various planting patterns on the water-use efficiency (WUE) and water distribution were investigated. Our results indicated that soil volumetric water content and soil evaporation in the intercropping systems showed decreasing trends in the order: maize row (MM) < maize-to-soybean row (MS) < soybean row (SS). The highest leaf transpiration (1.91 and 2.07 mmol m−2 s−1) for the intercropped maize was measured in each of the two years in the 20 cm maize narrow-row planting pattern and decreased thereafter. Opposite trend was observed for the intercropped soybean; the highest soybean leaf transpiration (7.01 and 6.80 mmol m−2 s−1 for 2013 and 2014, respectively) was recorded in the 70 cm. The WUE of maize and soybean intercrops was lower than that of sole crop counterparts. However, the maximum group water use efficiency (GWUE) of 26.08 and 26.20 kg ha−1 mm−1 in the 40–50 cm maize narrow-row planting pattern was, respectively, 39.6% and 23% higher compared with that of sole crops. The water equivalent ratio (WER) values ranged from 1.60–1.79, suggesting better crop water use in the intercrops over sole cropping. Planting patterns provided by 40–50 cm maize narrow-row spacing were considered the most efficient in terms of maximum total yields, GWUE and WER. These results suggest that an appropriate reduction in the spacing of narrow maize row with wide soybean row could be an efficient crop management method to achieve optimal WUE and homogeneous water distribution in maize–soybean intercropping systems.

Planting arrangements affect radiation use efficiency (RUE) and competitiveness of intercrop species in intercropping systems. Here, we reveal that narrow‐wide‐row planting arrangement in maize‐soybean relay‐intercropping system increases the dry matter and competitiveness of soybean, increased the RUE of maize and soybean, and compensates the yield loss of maize by substantially increasing the yield of soybean. In this field study, maize was planted with soybean in different planting arrangements (P1, 20:180, P2, 40:160; P3, 60:140, and P4, 80:120) of relay intercropping, all the relay‐intercropping treatments were compared with sole crops of maize (SM) and soybean (SS). Results showed that P1 improved the total RUE 3.26 g/MJ (maize RUE + soybean RUE) of maize and soybean in relay‐intercropping system. Compared to P4, treatment P1 increased the soybean competition ratio (CR) values (by 55%) but reduced the maize CR values (by 29%), which in turn significantly improved the yield of soybean by maintaining the maize yield. Generally, in P1, soybean produced 82% of SS yield, and maize produced 88% of SM yield, and it achieved the land equivalent ratio of 1.7. These results suggest that by maintaining the appropriate planting distances between maize and soybean we can improve the competitiveness and yield of intercrop species in relay‐intercropping system.

Upper canopy leaves of maize decrease the light-transmittance at middle-strata-leaves of maize and soybean canopy in maize-soybean relay-intercropping systems (MS). This affects the uptake of nutrients and distribution patterns in various plant organs of intercrop species in MS. Judicious defoliation of maize plants in MS could help to alleviate this problem and improve nutrient uptake and intercrop yields. In a two-year field experiment with MS, including the measurements of biomass production, nutrients uptake, and distribution at the organ level, and grain yields of intercrop species, maize plants were subjected to four-leaf defoliation treatments to improve the light-transmittance of maize and soybean plants. Defoliation of the topmost two-leaves (T2), four-leaves (T4), six-leaves (T6) was compared to no defoliation (T0). Compared to T0, treatment T2 improved the uptake of nitrogen (N), phosphorus (P), and potassium (K) in each plant part of maize by 23, 12, and 11% (grain), 22, 19, and 13% (straw), and 28, 14, and 18% (root), respectively. Defoliation also enhanced the uptake of N, P, and K in each plant part of soybean by 5, 5, and 10% (grain), 10, 17, and 13% (straw), and 14, 11, and 11% (root), respectively. The improved nutrient uptake in T2 increased the total biomass and its distribution in the root, straw, and grain of soybean and maize by 15 and 13%, and 21 and 15%, 20 and 14%, 7 and 10%, respectively compared to T0. On average, over two years, under T2, relay-cropped maize obtained 107% of the sole-yield, and relay-cropped soybean obtained 65% of the sole-yield. The T2 defoliation treatment also achieved the highest land equivalent ratio of 1.69 and 1.77, with a net profit of 1301.6 $ ha−1 and 1293.4 $ ha−1 in 2017 and 2018, respectively. Following the optimum defoliation treatment of maize in maize-soybean intercrops, i.e., defoliation of the topmost two-leaves, the nutrient uptake can be increased, and the nutrient partitioning over plant organs be better balanced. Optimum defoliation, therefore, enhances the productivity of maize-soybean intercropping systems.

Salinity is a major abiotic stress which limits crop production, especially under rainfed conditions. Selenium (Se), as an important micronutrient, plays a vital role in mitigating detrimental effects of different abiotic stresses. The objective of this research was to examine the effect of Se fertilization on black gram (Vigna mungo) under salt stress. Our results showed that salt stress (100 mM NaCl) in leaves significantly induced oxidative damage and caused a decline in relative water content, chlorophyll (Chl), stomatal conductance (gs), photochemical efficiency (Fv/Fm), sucrose, and reducing sugars. A low dose of Se (1.5 ppm) significantly reduced hydrogen peroxide content, malondialdehyde formation, cell membrane damage, and also improved antioxidative enzyme activities, including superoxide dismutase, catalase, ascorbate peroxidase, glutathione reductase, and glutathione peroxidase under salt stress. Se-treated plants exhibited higher Chl, gs, Fv/Fm, sucrose, and reducing sugars than untreated plants in response to salt stress. In addition, Se application enhanced Se uptake and reduced Na+ uptake, but Cl&minus, remained unaffected. Our results indicated that a low dose of Se effectively alleviated salt damage via inhibition of Na+ uptake and enhanced antioxidant defense resulting in a significant decrease in oxidative damage, and maintained gaseous exchange and PS II function for sucrose and reducing sugars accumulation in black gram.

Shade and drought are considered the most drastic abiotic stress factors which restrict normal crop growth especially for those high-density and intercropped crops in arid and semi-arid areas. However, relationship and mechanisms of the interactive effects of these two stress factors on crops are elusive. Here, we report our identification of relationship between shade and drought and their interactive effects on soybean plants. Our quantitative-real time PCR (q-PCR) results showed that shade significantly up-regulated Abscisic Acid (ABA) biosynthesis (NCED3 and AAO3) and signaling (ABI4 and ABI5) genes. Moreover, shade massively enhanced the ABA contents. Based on these results, we subjected soybean seedlings to pretreatment of shade (Pre-SH) and normal light (Pre-NL) followed by polyethylene glycol 6000 induced drought stress. Drought resulted in the reduction of relative water content, morphophysiological and biochemical parameters under both light regimes. However, plants grown under Pre-SH treatment protected their cells from damaging effects of drought by scavenging more reactive oxygen species (ROS) through enhancement of its defense system as compared to Pre-NL plants. Hence, our findings demonstrated that plants grown under Pre-NL conditions were more affected with drought stress than those of Pre-SH ones which suggested that pretreatment of shade can enhance the drought resistance of soybean seedlings.

Water imbalance condition (WIC) in a maize-soybean relay intercropping system is the main abiotic stress limiting biomass production and seed yield and, consequently, seed-quality. This experiment was started to study the effects of WIC on soybean, in which two soybean genotypes ND12 and C103 were grown in pots with roots split equally between two soil column and six WIC treatments (%) T1 (100), T2, (100:50), T3 (100:20), T4 (50:50), T5 (50:20), and T6 (20:20) field capacity on both sides of soybean roots were used. Results showed that both genotypes responded significantly to WIC treatments for all the parameters, however, the level of response differed between genotypes. Maximum osmoprotectants (except proline), biomass, yield and yield-related traits and superior seed quality were observed with ND12. Among WIC treatments, T2 and T3 produced 94% and 85%, and 93% and 81% of T1 biomass and yield, respectively. Similarly, treatments T2 and T3 also improved the oil quality by maintaining the content of unsaturated fatty acids and isoflavone content, while opposite trends were observed for protein content. Overall, moderate water reduction (T2 and T3) can improve soybean seed-quality and by selecting drought-resistant genotypes we can increase the soybean yield under intercropping systems.

Oilseeds yield response to sulphur (S) has been well investigated but the dynamics of total biomass accumulation (TBA) and partitioning by sesame plants in response to S are not well understood. This study was initiated to investigate the effects of S on sesame, in which four sesame varieties V1, SG-27, V2, SG-30, V3, SG-36, V4, SG-51 and four S treatments T1, 20, T2, 30, T3, 40, T4, 50 kg ha&minus, 1 were used. Results revealed that the leaf area index and photosynthetic rate of sesame varieties were significantly higher under T3 with V3. Similarly, S fertilization considerably increased the TBA and maximum TBA was reached at late-flowering with V3 in T3. Relative to T1, plants in T3 had 33 and 23% higher capsule and seed biomass, respectively. Furthermore, total S accumulation and distribution in different plant organs changed with growth stage, at pre-flowering and mid-flowering stage maximum S was found in the stem, whereas at late-flowering and full-maturity stage highest S was recorded in reproductive parts. These results implied that S fertilizers should be applied to agricultural fields to improve oilseed production and by selecting the appropriate and area-specific genotype we can increase sesame seed yield under rainfed conditions.

The effects of storage duration on the seed germination and metabolite profiling of soybean seeds with five different coloured coats were studied. Their germination, constituents and transcript expressions of isoflavones and free fatty acids (FFAs) were compared using chromatographic metabolomic profiling and transcriptome sequencing. The seed water content was characterized using nuclear magnetic resonance (NMR) relaxometry. Results showed that dark-coloured seeds were less inactivated than light-coloured seeds. The aglycone and β-glucoside concentrations of upstream constituents increased significantly, whereas the acetylglucosides and malonylglucosides of downstream constituents decreased with an increase in the storage period. FFAs increased considerably in the soybean seeds as a result of storage. These results indicate that dark-coloured soybean seeds have better storability than light-coloured seeds, and seed water content plays a role in seed inactivation. It was concluded that there are certain metabolic regularities that are associated with different coloured seed coats of soybeans under storage conditions.

Soybean production under maize&ndash, soybean relay-intercropping system (MSICS) is vulnerable to shading. A study was initiated to investigate the effects of three sowing-times: ST1, 90, ST2, 70, and ST3, 50 days of co-growth period and two phosphorus-rates: P0, 0, and P60, 60 kg P ha&minus, 1 on soybean under MSICS. Results revealed that ST3 significantly increased the photosynthetically active radiations, leaf area index, and photosynthetic rate by 72% and 58%, and 61% and 38%, and 6% and 8%, respectively, at full-flowering and full-pod stage of soybean than ST1. Treatment ST3, increased the total dry-matter (TDM) and the highest TDM was reached at full-seed (R6) stage. Similarly, ST3 considerably increased the dry-matter partitioning to pods and seeds, relative to ST1, soybean under ST3 at R6 had 35% and 30% higher pod and seed dry-matter, respectively. Moreover, ST3 exhibited the maximum seed-yield (mean 1829.5 kg ha&minus, 1) for both years of this study. Soybean under ST3 with P60 accumulated 38% higher P, and increased the P content in pods and seeds by 36% and 33%, respectively at R6 than ST1. These results imply that by selecting the appropriate sowing-time and phosphorus-rate for soybean, we can increase the TDM and seed-yield of soybean under MSICS.