Search

In this paper we report our most recent attempts to tackle a notorious problem across several scientific activities from the ultrasonics sonochemical perspective: reproducibility of results. We provide experimental results carried out in three different laboratories, using the same ingredients: ultrasound and a novel cavitation reactor bag. The main difference between the experiments is that they are aimed at different applications, KI liberation and MB degradation; and exfoliation of two nanomaterials: graphene and molybdenum disulfide. Iodine liberation rates and methylene blue degradation were higher for the cases where a cavitation intensification bag was used. Similarly, improved dispersion and more polydisperse exfoliated layers of nanomaterials were observed in the intensified bags compared to plain ones. The reproducibility of these new experiments is compared to previous experimental results under similar conditions. Our main conclusion is that despite knowing and understanding most physicochemical phenomena related to the origins and effects of cavitation, there is still a long path towards reproducibility, both in one laboratory, and compared across different laboratories. As emphasized in the sonochemical literature, the latter clearly illustrates the complexity of cavitation as nonlinear phenomenon, whose quantitative estimation represents a challenging aspect. We also provide a list of procedural steps that can help improving reproducibility and scale-up efforts., final draft, peerReviewed

Recent studies have shown that hazardous organic dye substances can be removed from aqueous solutions by spinel ferrite nanomaterials. We found that Sodium Dodecyl Sulfonate (SDS) surface-modified mesoporous ZnFe2O4 nanoparticles (10–50 nm) have a remarkably high maximum adsorptive capacity (∼699.30 mg/g) for aqueous Methylene Blue (MB) removal at T of 288 K and pH of 12. Unmodified ZnFe2O4 nanoparticles suffer from particle agglomeration, which reduces surface area, thus reducing their adsorptive capacity. Here it is shown that when modified with SDS, the specific surface area increased by ∼34%. It is also shown that the anionic SDS surfactant significantly increased the electrostatic attraction to the cationic MB compound. Moreover, it was found that adsorption of MB positively correlated with the aqueous solution’s pH, which is attributed to a stronger negative charge on the SDS modified ZnFe2O4 surface at high pHs. The SDS-modified ZnFe2O4 adsorption of MB fitted well with the Langmuir adsorption isotherm model, and kinetic data fitted into a pseudo-second-order model. Thermodynamic parameters indicated that the adsorption was spontaneous and exothermic in nature, and physisorption dominated the adsorption of MB. The findings of this study demonstrate the potential for enhanced removal of MB contamination from aqueous solutions by SDS-modified ZnFe2O4 nanoparticles and, therefore, the potential for them to remove cationic organic dye from wastewater., final draft, peerReviewed

Article, The Glaurocarini are a small Old World tribe of tachinids belonging to the subfamily Tachininae. Two genera are currently recognized, Glaurocara Thomson with 16 species and Semisuturia Malloch with eight species. In this study we describe Semisuturia moffattensis Inclán, O’Hara, Stireman & Cerretti sp. n. from Queensland and New South Wales and compare it with congeners as well as other glaurocarines. The new species is readily identifiable among world glaurocarines by having a row of setae on lower 2/3 of facial ridge. We further evaluate the monophyly of the Glaurocarini on the basis of morphological characters of both adult and larval stages. A molecular phylogenetic analysis also supports monophyly of the tribe but does not support a close relationship between Glaurocarini and Ormiini as has been suggested previously. Finally, we provide new morphological evidence from both adults and first instar larvae to support the monophyly of both Semisuturia and Glaurocara. The Glaurocarini are a small Old World tribe of tachinids belonging to the subfamily Tachininae. Two genera are currently recognized, Glaurocara Thomson with 16 species and Semisuturia Malloch with eight species. In this study we describe Semisuturia moffattensis Inclán, O’Hara, Stireman & Cerretti sp. n. from Queensland and New South Wales and compare it with congeners as well as other glaurocarines. The new species is readily identifiable among world glaurocarines by having a row of setae on lower 2/3 of facial ridge. We further evaluate the monophyly of the Glaurocarini on the basis of morphological characters of both adult and larval stages. A molecular phylogenetic analysis also supports monophyly of the tribe but does not support a close relationship between Glaurocarini and Ormiini as has been suggested previously. Finally, we provide new morphological evidence from both adults and first instar larvae to support the monophyly of both Semisuturia and Glaurocara., final draft, peerReviewed

Oil-contaminated water caused by either oil spill disasters or industrial disposal has posed a global risk to environmental sustainability and human health. To address the ever-growing need for highly efficient separation of oil/water mixtures, nanostructured TiO2/CuO dual coatings were fabricated on the copper mesh by a combination of electrochemical anodization and layer-by-layer self-assembly deposition to render its surface with superhydrophilic, underwater superoleophobic and self-cleaning functionality. Cu(OH)2 nanoneedle arrays (NNA) were vertically grown from the copper mesh surfaces by electrochemical anodization processes, followed by the deposition of TiO2 multilayer on the Cu(OH)2 NNA via layer-by-layer assembly prior to being calcinated to form TiO2/CuO dual coatings. The nanostructured TiO2/CuO NNA dual-coated copper meshes were demonstrated to exhibit a high separation efficiency (oil residue content less than 20 ppm), excellent water flux (more than 80 kL·h−1·m−2), and desirable self-cleaning ability under ultraviolet (UV) illumination. The photo-catalytic ability of the deposited TiO2 layers enabled the facile and rapid removal of the oil contaminants on the mesh surface under UV illumination to recover oil/water separation ability of the as-fabricated mesh for recycle use. With the adherent features of superhydrophilicity, underwater superoleophobicity and self-cleaning ability, the proposed TiO2/CuO NNA dual-coated meshes are potentially useful in practical oil/water separation applications., final draft, peerReviewed

In this work, cellulose nanocrystals (CNCs) and cellulose nanofibers (CNFs) were synthesized from absorbent cotton. Two pretreatments viz. dewaxing and bleaching with mild alkali were applied to the precursor (cotton). Acid hydrolysis was conducted with H2SO4 and dissolution of cotton was achieved with a mixture of NaOH-thiourea-urea-H2O at −3 °C. Synthesized cellulose samples were characterized using FTIR, XRD, SEM, BET, and zeta potential. It seems that synthesis conditions contributed to negative surface charge on cellulose samples and CNCs had the higher negative surface charge compared to CNFs. Furthermore, BET surface area, pore volume and pore diameter of CNCs were found to be higher as compared to CNFs. The dewaxed cellulose nanofibers (CNF D) had a slightly higher BET surface area (0.47 m2/g) and bigger pore diameter (59.87 Å) from attenuated contraction compared to waxed cellulose nanofibers (CNF W) (0.38 m2/g and 44.89 Å). The XRD of CNCs revealed a semi-crystalline structure and the dissolution agents influenced the crystallinity of CNFs. SEM images showed the porous nature of CNFs, the flaky nature and the nano-sized width of CNCs. Synthesized CNF D showed a better potential as an adsorbent with an average lead removal efficiency of 91.49% from aqueous solution., final draft, peerReviewed

Nanomaterials (NM) exhibit novel physicochemical properties that determine their interaction with biological substrates and processes. Recent nano-technological advances are leading to wide usage of metallic nanoparticles (NPs) in various fields. However, the increasing use of NPs has led to their release into environment and the toxicity of NPs on human health has become a concern. Moreover, there are inadvertently generated metallic NPs which are formed during various human activities (e.g. metal processing and energy production). Unfortunately, there are still widespread controversies and ambiguities with respect to the toxic effects and mechanisms of metallic NPs, e.g. metal oxides including ZnO. In this study, we generated zinc containing NMs, and studied them in vitro. Different nano-sized particles containing Zn were compared in in vitro study to elucidate the physicochemical characteristics (e.g. chemical composition, solubility, shape and size of the particles) that determine cellular toxicity. Zn induced toxicity in macrophage cell line (RAW 264.7) was detected, leading to the cell cycle disruption, cell death and excitation of release of inflammatory mediators. The solubility and the size of Zn compounds had a major role in the induced toxic responses. The soluble particles reduced the cell viability, whereas the less soluble NPs significantly increased inflammation. Moreover, uptake of large ZnO NPs inside the cells was likely to play a key role in the detected cell cycle arrest., final draft, peerReviewed

Sugar industry generates a significant amount of by-products (such as sugar beet pulp (SBP), sugarcane bagasse (SCB)) and their handling and management is a matter of great concern. Among their uses such as fuel and fertilizer, the valorization of biowastes from sugar industry as adsorbents for the removal of various aquatic pollutants presents promising features in terms of cost reduction for waste disposal and environmental protection. This review article deals with the use of sugar waste based materials used as adsorbents in water treatment. For this purpose, isotherms, kinetics, desorption and thermodynamic information are thoroughly presented. Moreover, many parameters which control the adsorption process, such as the effect of initial concentration, initial solution pH, contact time, temperature and adsorbent's dosage, are also discussed in detailed. The performance of the adsorbents largely depends on the type of pollutants and experimental conditions. Surface modification with chemicals greatly enhance the removal efficiency with favorable kinetics and adsorption mechanism., final draft, peerReviewed

Spatial and seasonal variation in the abundance and composition of phytoplankton and other basal resources (bacteria, terrestrial detritus) influence the availability of essential polyunsaturated fatty acids (PUFA) for upper trophic levels in lake food webs. We studied accumulation, composition and content of fatty acids in planktivorous vendace (Coregonus albula) muscle tissue during the summer feeding period (May to late September) in six boreal lakes. Vendace muscle fatty acid content increased from ~17.7 mg/g DW to ~28.1 mg/g DW from spring to summer, corresponding to a ~59% increase in total fatty acids. PUFA accounted for 45%–65% of all fatty acids, and the most abundant fatty acid was docosahexaenoic acid (DHA, 22:6n-3). The DHA content remained relatively constant throughout the sampling period (~7–8 mg/g DW), but the proportion of DHA decreased from ~40% in spring to ~30% in summer and autumn. The decrease in DHA proportion was due to accumulation of other fatty acids, primarily C18 PUFA (predominantly synthetised by algae) and monounsaturated fatty acids. A similar fatty acid accumulation pattern was observed in lipid storing copepods, an important prey for planktivorous vendace. The abundance of bacterial and terrestrial biomarker fatty acids in vendace muscle and prey items was low (, final draft, peerReviewed

Article, 1. Many freshwater systems receive substantial inputs of terrestrial organic matter. Terrestrially derived dissolved organic carbon (t-DOC) inputs can modify light availability, the spatial distribution of primary production, heat, and oxygen in aquatic systems, as well as inorganic nutrient bioavailability. It is also well-established that some terrestrial inputs (such as invertebrates and fruits) provide highquality food resources for consumers in some systems. 2. In small to moderate-sized streams, leaf litter inputs average approximately three times greater than the autochthonous production. Conversely, in oligo/mesotrophic lakes algal production is typically five times greater than the available flux of allochthonous basal resources. 3. Terrestrial particulate organic carbon (t-POC) inputs to lakes and rivers are comprised of 80%–90% biochemically recalcitrant lignocellulose, which is highly resistant to enzymatic breakdown by animal consumers. Further, t-POC and heterotrophic bacteria lack essential biochemical compounds that are critical for rapid growth and reproduction in aquatic invertebrates and fishes. Several studies have directly shown that these resources have very low food quality for herbivorous zooplankton and benthic invertebrates. 4. Much of the nitrogen assimilated by stream consumers is probably of algal origin, even in systems where there appears to be a significant terrestrial carbon contribution. Amino acid stable isotope analyses for large river food webs indicate that most upper trophic level essential amino acids are derived from algae. Similarly profiles of essential fatty acids in consumers show a strong dependence on the algal food resources. 5. Primary production to respiration ratios are not a meaningful index to assess consumer allochthony because respiration represents an oxidised carbon flux that cannot be utilised by animal consumers. Rather, the relative importance of allochthonous subsidies for upper trophic level production should be addressed by considering the rates at which terrestrial and autochthonous resources are consumed and the growth efficiency supported by this food. 6. Ultimately, the biochemical composition of a particular basal resource, and not just its quantity or origin, determines how readily this material is incorporated into upper trophic level consumers. Because of its highly favourable biochemical composition and greater availability, we conclude that microalgal production supports most animal production in freshwater ecosystems., final draft, http://purl.org/eprint/status/PeerReviewed

Fly and bottom ashes are collected at power plants to reduce the environmental effects of energy production. However, handling the ashes causes health problems for operators, maintenance workers and truck drivers at the power plants. Hence, we evaluated ash loaders’ peak inhalation exposures to the chemical components of ash and diesel exhausts in open and closed ash loading stations at biomass-fuelled combined heat and power plants. We also carried out chemical and morphological analyses of the ashes to evaluate their health hazard potential in order to find practical technical measures to reduce workers’ exposure. On the basis of X-ray diffraction analyses, the main respirable crystalline ash compounds were SiO2, CaSO4, CaO, Ca2Al2SiO7, NaCl and Ca3Al2O6 in the fly ashes and SiO2, KAlSi3O8, NaAlSi3O8 and Ca2Al2SiO7 in the bottom ashes. The short-term exposure levels of respirable crystalline silica, inhalable inorganic dust, Cr, Mn, Ni and nitric oxide exceeded their Finnish eight hours occupational exposure limit values in the closed ash loading station. According to our observations, more attention should be paid to the ash-moistening process, the use of tank trucks instead of open cassette flatbed trucks, and the sealing of the loading line from the silo to the truck which would prevent spreading the ash into the air. The idling time of diesel trucks should also be limited, and ash loading stations should be equipped with exhaust gas ventilators. If working conditions make it impossible to keep to the OEL values, workers must use respirators and protect their eyes and skin., final draft, peerReviewed

Social insect colonies, especially of ants, often include several egg-laying queens that are not always closely related to each other. At least in some cases, the ants seem to accept non-related queens into their colonies. Here I test whether the colony queen status (with or without a queen), genetic and geographic differences between source and recipient nests and the average relatedness of the workers in the recipient colony affect the acceptance of alien queens. I used fi eld collected ruby ant Myrmica rubra colonies as a model system. Only the queen status signifi cantly affected the acceptance process. Colonies without queens accepted alien queens more frequently than colonies with a queen. The nests without queens and nest fragments may act as vectors for gene fl ow by the movement of queens between nests, i.e., queen fl ow., published version, peerReviewed

Article, Objectives: The aim of this study was to assess the implementation of partitioning and the negative pressure method in limiting the dispersion of dust to areas adjacent to renovation sites. Methods: The pressure difference between the worksites and adjacent areas and PM10 concentrations in the both zones were measured in 12 renovation sites, and the factors affecting the prevention of dispersion of dust were assessed. Results: Poor implementation of partitioning and negative pressurization found in half of the renovation sites lead difficulties in achieving a proper negative pressure, causing dispersion of dust into adjacent areas. Main problems related to flimsy partitioning walls and poor air tightness of the enclosure. Dust concentrations in adjacent areas were substantially lower when natural ventilation in the renovation site was rejected and partitioning walls and their junctions to existing structures were sealed. In case of leaky enclosures, despite the high air exchange rates, a definite negative pressure could not be maintained. Instead, negative pressure minimum of −5 Pa was found to be sufficient for limiting the dispersion of dust from renovation sites. Conclusions: Improvement on implementation of dust controls is required through revising the guidance documents, education, and efficient supervision. This study revealed that the current Finnish practice to implement the negative pressurization based on the air exchange rate achieved with the portable exhaust fans alone is not reasonable to assure adequate dust containment. Continuous negative pressure minimum of −5 Pa is suggested, and it should be monitored with alarm devices throughout the renovation processes., final draft, http://purl.org/eprint/status/PeerReviewed

A considerable proportion of boreal mires have been drained for soil amelioration purposes. In response to drainage-induced degradation, restoration practices have been implemented in recent decades. Restoration by raising the water level is often followed by changes in the quality of runoff waters, especially in concentrations of dissolved organic carbon (DOC), nitrogen (N) and phosphorus (total P, PO4-P). We studied how mire restoration affected bacterial production (BP), bacterial growth efficiency (BGE%) and respiration (R) in mire runoff waters from spruce swamps and Sphagnum pine bogs in south-central Finland. The quality of runoff water was monitored for 8 years (2008–2015) and bacterial activity was measured during 3 years (2010–2012) at runoff weir sites, including two pristine controls, one drained control and four treatment sites. The concentrations of DOC, N and P increased for 3–5 years after restoration. The increased availability of nutrients was followed by doubled BP (from ca. 0.34 to 0.88 µmol C L−1 d−1, averages of restored sites) and BGE% (from ca. 2.7 to 9.2%), whereas microbial respiration was only slightly increased. However, bacterial activity in mire waters was low compared with those generally measured in river and lake waters. This was presumably related to the recalcitrant quality of the mire-originated DOC, which was not clearly influenced by restoration. Dissolved organic matter (DOM) of low bioavailability contributes to browning of headwaters. As our study was focused only on short-term (1–5 years) effects, more research is needed for evaluating long-term impacts of peatland origin DOM on carbon fluxes, microbial activity and food webs of recipient aquatic ecosystems., final draft, peerReviewed

Terrestrial dissolved organic carbon (DOC) provides an external carbon source to lake ecosystems. However, there is ongoing debate about whether external DOC that enters a lake can pass up the food web to support top consumers. We show, from experimental manipulation of a whole lake, that externally loaded DOC can contribute appreciably to fish biomass. Monthly additions of cane sugar with a distinct carbon stable isotope value during 2 years rapidly enriched the 13C content of zooplankton and macroinvertebrates, with a more gradual 13C enrichment of fish. After sugar addition stopped, the 13C content of consumers reverted towards original values. A simple isotope mixing model indicated that by the end of the sugar addition almost 20% of fish carbon in the lake was derived from the added sugar. Our results provide the first direct experimental demonstration at relevant ecological spatial and temporal scales that externally loaded DOC to lakes can indeed transfer to top consumers., final draft, peerReviewed

Plant volatiles mediate a range of interactions across and within trophic levels, including plant–plant interactions. Volatiles emitted by a plant may trigger physiological responses in neighboring plants or adhere to their surfaces, which, in turn, may affect the responses of the neighboring plant to herbivory. These volatiles are subject to chemical reactions during transport in air currents, especially in a polluted atmosphere. We conducted a field experiment to test for the adsorption of dispenser-released myrcene on the surfaces of cabbage plants and the effects of distance from the dispenser and elevated ozone levels (1.4× ambient) on the process. We also tested the effects of the same treatments on oviposition on cabbage plants by naturally occurring Plutella xylostella. Under low ambient ozone conditions of central Finland, there was evidence for the adsorption and re-release of myrcene by cabbage plants growing at a distance of 50 cm from myrcene dispensers. This effect was absent at elevated ozone levels. The number of eggs deposited by P. xylostella was generally lower in plots under elevated ozone compared to ambient control plots. Our results indicate that passive adsorption and re-release of a volatile monoterpene can occur in nature; however, this process is dependent upon the distance between emitter source and receiver plants as well as the concentration of atmospheric pollutants in the air. We conclude that, in the development of field-scale use of plant volatiles in modern pest control, the effects of distances and air pollution should be considered., final draft, peerReviewed

In this study, cobalt ferrites (C) decorated onto 2D material (porous graphene (PG)) and 1D material (carbon nanofibers (CNF)), denoted as PG-C and CNF-C nanocomposites, respectively, were synthesized using solvothermal process. The prepared nanocomposites were studied as magnetic adsorbents for the removal of lead (cationic) and chromium(VI) (anionic) metal ions. The structural and chemical analysis of synthesized nanocomposites was conducted using different characterization techniques including Brunauer–Emmett–Teller (BET) analysis, field emission-scanning electron microscopy (FE-SEM), Fourier-transform infrared spectroscopy (FTIR), high resolution-transmission electron microscopy (HR-TEM), vibrating sample magnetometer (VSM), X-ray diffraction (XRD), and X-ray photoelectron spectroscopy (XPS). Batch mode adsorption studies were conducted with the prepared nanocomposites to examine their maximum adsorption potential for lead and chromate ions. Performance parameters (time, pH, adsorbent dosage and initial ion concentrations) effecting the adsorption capacity of the nanocomposites were optimized. Different kinetic and isotherm models were examined to elucidate the adsorption process. Synthesized nanocomposites exhibited significant potential for the studied metal ions that can be further examined at pilot scale for the removal of metal ions from contaminated water., published version, peerReviewed

Abundant secondary metabolites, such as condensed tannins, and their interpopulation genotypic variation can remain through plant leaf senescence and affect litter decomposition. Whether the intrapopulation genotypic variation of a more diverse assortment of secondary metabolites equally persists through leaf senescence and litter decomposition is not well understood. We analyzed concentrations of intracellular phenolics, epicuticular flavonoid aglycones, epicuticular triterpenoids, condensed tannins, and lignin in green leaves, senescent leaves and partly decomposed litter of silver birch, Betula pendula. Broad-sense heritability (H2) and coefficient of genotypic variation (CVG) were estimated for metabolites in senescent leaves and litter using 19 genotypes selected from a B. pendula population in southern Finland. We found that most of the secondary metabolites remained through senescence and decomposition and that their persistence was related to their chemical properties. Intrapopulation H2 and CVG for intracellular phenolics, epicuticular flavonoid aglycones and condensed tannins were high and remarkably, increased from senescent leaves to decomposed litter. The rank of genotypes in metabolite concentrations was persistent through litter decomposition. Lignin was an exception, however, with a diminishing genotypic variation during decomposition, and the concentrations of lignin and condensed tannins had a negative genotypic correlation in the senescent leaves. Our results show that secondary metabolites and their intrapopulation genotypic variation can for the most part remain through leaf senescence and early decomposition, which is a prerequisite for initial litter quality to predict variation in litter decomposition rates. Persistent genotypic variation also opens an avenue for selection to impact litter decomposition in B. pendula populations through acting on their green foliage secondary chemistry. The negative genotypic correlations and diminishing heritability of lignin concentrations may, however, counteract this process., published version, peerReviewed

China has a rich resource of native sheep (Ovis aries) breeds associated with historical movements of several nomadic societies. However, the history of sheep and the associated nomadic societies in ancient China remains poorly understood. Here, we studied the genomic diversity of Chinese sheep using genome-wide SNPs, mitochondrial and Y-chromosomal variations in > 1,000 modern samples. Population genomic analyses combined with archeological records and historical ethnic demographics data revealed genetic signatures of the origins, secondary expansions and admixtures, of Chinese sheep thereby revealing the peopling patterns of nomads and the expansion of early pastoralism in East Asia. Originating from the Mongolian Plateau ∼5,000‒5,700 years ago, Chinese sheep were inferred to spread in the upper and middle reaches of the Yellow River ∼3,000‒5,000 years ago following the expansions of the Di-Qiang people. Afterwards, sheep were then inferred to reach the Qinghai-Tibetan and Yunnan-Kweichow plateaus ∼2,000‒2,600 years ago by following the north-to-southwest routes of the Di-Qiang migration. We also unveiled two subsequent waves of migrations of fat-tailed sheep into northern China, which were largely commensurate with the migrations of ancestors of Hui Muslims eastward and Mongols southward during the 12th‒13th centuries. Furthermore, we revealed signs of argali introgression into domestic sheep, extensive historical mixtures among domestic populations and strong artificial selection for tail type and other traits, reflecting various breeding strategies by nomadic societies in ancient China., published version, peerReviewed

Permafrost in the Arctic is thawing, exposing large carbon and nitrogen stocks for decomposition. Gaseous carbon release from Arctic soils due to permafrost thawing is known to be substantial, but growing evidence suggests that Arctic soils may also be relevant sources of nitrous oxide (N2O). Here we show that N2O emissions from subarctic peatlands increase as the permafrost thaws. In our study, the highest postthaw emissions occurred from bare peat surfaces, a typical landform in permafrost peatlands, where permafrost thaw caused a fivefold increase in emissions (0.56 ± 0.11 vs. 2.81 ± 0.6 mg N2O m−2 d−1). These emission rates match those from tropical forest soils, the world’s largest natural terrestrial N2O source. The presence of vegetation, known to limit N2O emissions in tundra, did decrease (by ∼90%) but did not prevent thaw-induced N2O release, whereas waterlogged conditions suppressed the emissions. We show that regions with high probability for N2O emissions cover one-fourth of the Arctic. Our results imply that the Arctic N2O budget will depend strongly on moisture changes, and that a gradual deepening of the active layer will create a strong noncarbon climate change feedback., published version, peerReviewed

The net ecosystem CO2 exchange is the result of the imbalance between the assimilation process (gross primary production, GPP) and ecosystem respiration (RE). The aim of this study was to investigate temperature sensitivities of these processes and the effect of climate warming on the annual terrestrial net ecosystem CO2 exchange globally in the boreal and temperate regions. A database of 403 site-years of ecosystem flux data at 101 sites in the world was collected and analyzed. Temperature sensitivities of rates of RE and GPP were quantified with Q10, defined as the increase of RE (or GPP) rates with a temperature rise of 10 °C. Results showed that on the annual time scale, the intrinsic temperature sensitivity of GPP (Q10sG ) was higher than or equivalent to the intrinsic temperature sensitivity of RE (Q10sR ). Q10sG was negatively correlated to the mean annual temperature (MAT), whereas Q10sR was independent of MAT. The analysis of the current temperature sensitivities and net ecosystem production suggested that temperature rise might enhance the CO2 sink of terrestrial ecosystems both in the boreal and temperate regions. In addition, ecosystems in these regions with different plant functional types should sequester more CO2 with climate warming., published version, peerReviewed

After carbon dioxide (CO2), aerosol black carbon (BC) is considered to be the second most important contributor to global warming. This paper presents equivalent black carbon (eBC) (derived from an optical absorption method) data collected from three sites in the interior of South Africa where continuous measurements were conducted, i.e. Elandsfontein, Welgegund and Marikana, as well elemental carbon (EC) (determined by evolved carbon method) data at five sites where samples were collected once a month on a filter and analysed offline, i.e. Louis Trichardt, Skukuza, Vaal Triangle, Amersfoort and Botsalano. Analyses of eBC and EC spatial mass concentration patterns across the eight sites indicate that the mass concentrations in the South African interior are in general higher than what has been reported for the developed world and that different sources are likely to influence different sites. The mean eBC or EC mass concentrations for the background sites (Welgegund, Louis Trichardt, Skukuza, Botsalano) and sites influenced by industrial activities and/or nearby settlements (Elandsfontein, Marikana, Vaal Triangle and Amersfoort) ranged between 0.7 and 1.1, and 1.3 and 1.4 µg m−3, respectively. Similar seasonal patterns were observed at all three sites where continuous measurement data were collected (Elandsfontein, Marikana and Welgegund), with the highest eBC mass concentrations measured from June to October, indicating contributions from household combustion in the cold winter months (June–August), as well as savannah and grassland fires during the dry season (May to mid-October). Diurnal patterns of eBC at Elandsfontein, Marikana and Welgegund indicated maximum concentrations in the early mornings and late evenings, and minima during daytime. From the patterns it could be deduced that for Marikana and Welgegund, household combustion, as well as savannah and grassland fires, were the most significant sources, respectively. Possible contributing sources were explored in greater detail for Elandsfontein, with five main sources being identified as coal-fired power stations, pyrometallurgical smelters, traffic, household combustion, as well as savannah and grassland fires. Industries on the Mpumalanga Highveld are often blamed for all forms of pollution, due to the NO2 hotspot over this area that is attributed to NOx emissions from industries and vehicle emissions from the Johannesburg–Pretoria megacity. However, a comparison of source strengths indicated that household combustion as well as savannah and grassland fires were the most significant sources of eBC, particularly during winter and spring months, while coal-fired power stations, pyrometallurgical smelters and traffic contribute to eBC mass concentration levels year round., published version, peerReviewed

UV-LEDs are a new method of disinfecting drinking water. Some viruses are very resistant to UV and the efficiency of UV-LEDs to disinfect them needs to be studied. Drinking water was disinfected with UV-LEDs after spiking the water with MS2 and four UV- and/or Cl-resistant coliphages belonging to RNA or DNA coliphages isolated from municipal wastewater. UV-LEDs operating at a wavelength of 270 nm for 2 min with 120 mW of irradiation caused 0.93–2.73 Log10-reductions of coliphages tested in a reactor of a 5.2 L volume. Irradiation time of 10 min in the same system increased the Log10-reductions to 4.30–5.16. Traditional mercury UV (Hg-UV) lamp at a 254 nm wavelength caused 0.67–4.08 Log10-reductions in 2 min and 4.56–7.21 Log10-reductions in 10 min in 10 mL of water. All coliphages tested except MS2 achieved 4 Log10-reductions with UV-LEDs at a dose that corresponded to 70 mWs/cm2 using Hg-UV. Thus, UV-LEDs are a promising method of disinfecting UV- and/or Cl-resistant viruses., published version, peerReviewed

Insects produce pigment and structural colours mainly for camouflage, signaling, physical protection or temperature regulation, and colour patterns can provide information about individual quality. Although the evolutionary function and nature of the variability in colouration are well known for many invertebrate taxa, there is little information on this topic for ants. We studied individual variation in the melanin-based colour traits of workers of the red wood ant, Formica rufa (Hymenoptera: Formicidae), from 20 colonies in Southern Finland and revealed the type of colouration in this species. First, using the threshold approach we distinguished between continuous and discrete variations. Furthermore, the analyses affirmed nine discrete morphs in terms of the colouration on the head and eight on the pronotum, while only continuous variation were found on the other body parts. Measuring the size of a particular colour pattern, the intensity of colour expression (degree of melanization) and statistical analyses allowed an assessment of the intra-individual variation in both discrete and continuous patterns. The results revealed substantial modularity in the above mentioned colouration traits. In workers of F. rufa there were individuals with a dark head and light coloured thorax and vice a versa. Size of the dark pigment colour patterns exhibited less modularity than the degree of melanization. Finally, the interrelation between colouration traits and individual body size revealed their size-dependent origin. Small individuals had relatively larger areas of colour on the head and thorax than big individuals. These results are likely to facilitate further taxonomical and ecological studies on red wood ants, as they show it is possible to assess colouration traits in ants. However, more studies are needed on the function of polymorphism and modular colouration in this group of ants., published version, peerReviewed

Silver birch (Betula pendula Roth) allocates substantial resources to the production of glandular trichomes. If these trichomes can protect trees from temperature and water stress, their production would be expected to increase under these conditions. We studied how glandular trichome density and number in the leaves of two-year-old silver birch plantlets respond to single and combined treatments of elevated temperature (+1 °C) and three different levels of soil moisture (low, normal, and excess watering). Moreover, we quantified the seasonal variation in trichome density in mature long-shoot leaves of young, greenhouse-grown silver birches. Our results demonstrate clear differences between responses of glandular trichomes on different leaf surfaces. On the adaxial leaf surface, both drought and elevated temperature reduced the production of glandular trichomes. Interestingly, this response was absent in plants subjected to the combined treatment. Glandular trichome production on the abaxial leaf surface increased considerably in leaves produced during the growing season, reflecting a seasonal trend. Maintaining a strong seasonal increase in trichome production of abaxial surfaces even in low-water conditions suggests an important, though still unknown, role for abaxial glandular trichomes. In silver birch stems, those trichomes are strongly responsible for herbivore defense., final draft, peerReviewed

Direct consumption of allochthonous resources generally yields poor growth and reproduction in zooplankton, but it is still unclear how trophic upgrading of terrestrial dissolved organic matter (tDOM) via the microbial food web may support zooplankton. We compared survival, somatic growth and reproduction of Daphnia magna fed with the heterotrophic flagellate Paraphysomonas vestita and three algal diets. Paraphysomonas was fed lake bacteria that used tDOM as a substrate to simulate an allochthonous diet that zooplankton encounter in lakes. The highest survival, growth and reproduction was achieved with a diet of Cryptomonas, while Daphnia performance was the worst when fed Microcystis. Paraphysomonas and Scenedesmus diets lead to intermediate growth and reproduction. Cryptomonas contained high amounts of essential polyunsaturated fatty acids (PUFA) and phytosterols that supported high somatic growth and reproduction, whereas poor performance of Daphnia on the cyanobacterial diet was most likely due to lack of sterols. Paraphysomonas contained some phytosterols, but not in sufficient amounts, and also essential PUFA (eicosapentaenoic and arachidonic acid) that enhance zooplankton growth and reproduction. Our results indicate that the tDOM-based microbial food web supports Daphnia performance even as a sole food source, and may be important in providing zooplankton with essential biochemical components when phytoplankton quantity or quality is low., final draft, peerReviewed

In this study, magnetic nanocomposites viz. SiO2@CoFe2O4 nanoparticles decorated on graphene oxide were synthesized using solvothermal and sol-gel processes. The prepared nanocomposite materials were used as magnetic adsorbents for the removal of organic and inorganic pollutants (acid black 1 dye and Cr(VI) ions as model pollutants) from aqueous solution. The structure, morphology and other physico-chemical properties of nanocomposites were characterized by X-ray diffraction (XRD), field emission-scanning electron microscopy (FE-SEM), high resolution-transmission electron microscopy (HR-TEM), vibrating sample magnetometer (VSM), X-ray photo spectroscopy (XPS), zeta potential and Fourier transform infrared (FT-IR) spectroscopy. Batch mode adsorption studies were conducted with the prepared nanocomposites to determine the maximum adsorption capacity of acid black 1 dye and Cr(VI) ions as a function of contact time, pH, adsorbent dosage and initial adsorbate concentrations. Different kinetic and isotherm models were tested to describe and elucidate the adsorption mechanisms. Based on the experimental results obtained, the synthesized materials proved to exhibit considerable potential for the removal of acid black 1 and Cr(VI) ions from aqueous solution., final draft, peerReviewed

According to World Health Organization (WHO), fluoride has a narrow prescribed concentration level in drinking water (< 1.5 mg L− 1) and defluoridation of water is necessary to remove elevated concentrations of fluoride from water. In the present work, aluminium acetylacetonate was used as a precursor which was dissolved in methanol to produce Al2O3 nanoparticles by flame spray pyrolysis (FSP) technique. Al2O3 nanoparticles were characterized by various techniques (e.g. Brunauer-Emmet-Teller (BET), X-ray diffraction (XRD), scanning electron microscopy (SEM), transmission electron microscopy (TEM) and Fourier Transform Infrared (FTIR) to get an insight of their physicochemical properties. The effects of different variable parameters such as solution pH (3 − 11), contact time (5–180 min), initial fluoride concentration (0–30 mg L− 1), temperature (25, 35 and 45 °C) and competing anions (chloride, nitrate, carbonate, sulfate and phosphate) were investigated to study the adsorption of fluoride from water. Among different kinetic and isotherm models studied, the pseudo-second-order model best described the kinetics, while equilibrium data were well fitted by the Langmuir isotherm model. The competing anions on defluoridation from water followed the order: phosphate > carbonate > sulfate > nitrate > chloride. Results from this study revealed the potential utility of Al2O3 nanoparticles for defluoridation of water., final draft, peerReviewed

Acclimation of conifer needle anatomy to climate change is poorly understood. We studied needle anatomy, shoot gas exchange, current-year shoot length, and stem diameter growth in Norway spruce (Picea abies (L.) Karst.) and Scots pine (Pinus sylvestris L.) seedlings exposed to elevated ozone (1.35× to 1.5× ambient concentration) and elevated temperature (0.9–1.3 °C + ambient temperature) alone and in combination for two exposure seasons in two separate open-field experiments in central Finland. Pines grew also at two soil nitrogen levels. In spruce, warming increased mesophyll intercellular space and reduced gas exchange and shoot growth and made needles narrower and the epidermis and hypodermis thinner. In pine, warming made needles bigger, increased shoot and stem growth, stomatal row number, and proportions of vascular cylinder, phloem, and xylem and reduced the proportion of mesophyll. These responses indicate that pine benefited and spruce suffered from moderate warming. Ozone caused a thickening of epi- and hypo-dermis and a lower stomatal conductance in both species, reduced stomatal density in spruce, and increased proportions of phloem, xylem, and sclerenchyma and reduced growth in pine. Ozone responses suggest increased oxidative stress defense. Stomatal responses were affected by interactions of elevated temperature and ozone in both species. Nitrogen availability modified ozone and temperature responses, particularly in the vascular tissues in pine., final draft, peerReviewed

In this study, a commercial granular activated carbon was modified with sodium hydroxide followed by a cationic surfactant to increase its efficiency for nitrate removal from water. Physicochemical properties of untreated activated carbon and treated activated carbons were characterized in the terms of FTIR spectroscopy, N2 adsorption-desorption, and SEM analyses. The surface properties of ACs were determined by N2-adsorption isotherm data and modeled with several mathematical models. The results showed that the combination of two treatments could improve the nitrate removal efficiency, which is mainly attributed to the modification by cationic surfactant, while the porous volume and specific surface area did not seem to play an important role in the nitrate uptake. In batch experiments, the influence of several operating parameters on the nitrate adsorption capacity was investigated including solution pH, adsorbent dosage, contact time, initial nitrate concentration, temperature and competing ions. Small continuous column test was performed to investigate the feasibility of using each adsorbent. Results of this study suggest that using two-step treatment can be a promising method to enhance the efficiency of activated carbon for nitrate removal from water., final draft, peerReviewed

Several North American crayfish species have so far been identified as carriers of the crayfish plague agent Aphanomyces astaci. The pathogen is responsible for the declines of thousands of European crayfish populations. Currently, one of the introduction pathways of North American crayfish species is the aquarium trade which may sometimes be followed by intentional release or unintentional escape of the pet species into the wild. We investigated 85 samples of North American and New Guinean species, available through the aquarium trade, for their possible infection with A. astaci. Crayfish plague infection was examined by applying real-time PCR. Besides morphological identification, we sequenced a fragment of the mitochondrial cytochrome c oxidase subunit I (COI) gene for crayfish species confirmation. Additionally, sequence analysis of nuclear DNA was conducted to identify the A. astaci lineage of moderate to highly infected crayfish. A total of 11 of the 85 analyzed crayfish individuals tested positive for an A. astaci infection, of which nine species are for the first time identified as carriers of A. astaci. No new genetic lineages of A. astaci were identified. The results confirm that, due to the positive carrier status of tested crayfish, the aquarium trade in Europe can facilitate the spread of A. astaci and can thus be a significant threat to the indigenous crayfish and the environment., published version, peerReviewed

Copy number variation (CNV), which is characterized by large-scale losses or gains of DNA fragments, contributes significantly to genetic and phenotypic variation. Assessing CNV across different European cattle populations might reveal genetic changes responsible for phenotypic differences, which have accumulated throughout the domestication history of cattle as consequences of evolutionary forces that act upon them. To explore pattern of CNVs across European cattle, we genotyped 149 individuals, that represent different European regions, using the Illumina Bovine HD Genotyping array. A total of 9,944 autosomal CNVs were identified in 149 samples using a Hidden Markov Model (HMM) as employed in PennCNV. Animals originating from several breeds of British Isles, and Balkan and Italian regions, on average, displayed higher abundance of CNV counts than Dutch or Alpine animals. A total of 923 CNV regions (CNVRs) were identified by aggregating CNVs overlapping in at least two animals. The hierarchical clustering of CNVRs indicated low differentiation and sharing of high-frequency CNVRs between European cattle populations. Various CNVRs identified in the present study overlapped with olfactory receptor genes and genes related to immune system. In addition, we also detected a CNV overlapping the Kit gene in English longhorn cattle which has previously been associated with color-sidedness. To conclude, we provide a comprehensive overview of CNV distribution in genome of European cattle. Our results indicate an important role of purifying selection and genomic drift in shaping CNV diversity that exists between different European cattle populations., published version, peerReviewed

Toxicological characterisation of combustion emissions in vitro are often conducted with macrophage cell lines, and the majority of these experiments are based on responses measured at 24 h after the exposure. The aim of this study was to investigate how significant role time course plays on toxicological endpoints that are commonly measured in vitro. The RAW264.7 macrophage cell line was exposed to PM1 samples (150 μg/ml) from biomass combustion devices representing old and modern combustion technologies for 2, 4, 8, 12, 24 and 32 h. After the exposure, cellular metabolic activity, cell membrane integrity, cellular DNA content, DNA damage and production of inflammatory markers were assessed. The present study revealed major differences in the time courses of the responses, statistical differences between the studied samples mostly limiting to differences between modern and old technology samples. Early stage responses consisted of disturbances in metabolic activity and cell membrane integrity. Middle time points revealed increases in chemokine production, whereas late-phase responses exhibited mostly increased DNA-damage, decreased membrane integrity and apoptotic activity. Altogether, these results implicate that the time point of measurement has to be considered carefully, when the toxicity of emission particles is characterised in in vitro study set-ups., final draft, peerReviewed

Recent studies indicated that Arctic lakes play an important role in receiving, processing, and storing organic carbon exported from terrestrial ecosystems. To quantify the contribution of Arctic lakes to the global carbon cycle, we developed a one-dimensional process-based Arctic Lake Biogeochemistry Model (ALBM) that explicitly simulates the dynamics of organic and inorganic carbon in Arctic lakes. By realistically modeling water mixing, carbon biogeochemistry, and permafrost carbon loading, the model can reproduce the seasonal variability of CO2 fluxes from the study Arctic lakes. The simulated area-weighted CO2 fluxes from yedoma thermokarst lakes, nonyedoma thermokarst lakes, and glacial lakes are 29.5, 13.0, and 21.4 g C m−2 yr−1, respectively, close to the observed values (31.2, 17.2, and 16.5 ± 7.7 g C m−2 yr−1, respectively). The simulations show that the high CO2 fluxes from yedoma thermokarst lakes are stimulated by the biomineralization of mobilized labile organic carbon from thawing yedoma permafrost. The simulations also imply that the relative contribution of glacial lakes to the global carbon cycle could be the largest because of their much larger surface area and high biomineralization and carbon loading. According to the model, sunlight-induced organic carbon degradation is more important for shallow nonyedoma thermokarst lakes but its overall contribution to the global carbon cycle could be limited. Overall, the ALBM can simulate the whole-lake carbon balance of Arctic lakes, a difficult task for field and laboratory experiments and other biogeochemistry models., published version, peerReviewed

Feral cattle residing in Chirikof Island, Alaska, are relatively distinct from breeds used in commercial production in North America. However, preliminary evidence suggested that they exhibit substantial genetic relationship with cattle from Yakutian region of Siberia. Thus, our objective was to further elucidate quantify the origins, admixture and divergence of the Chirikof Island cattle relative to cattle from Siberia and USA. Subject animals were genotyped at 15 microsatellite loci. Compared with Turano–Mongolian and North American cattle, Chirikof Island cattle had similar variation, with slightly less observed heterozygosity, fewer alleles per locus and a positive fixation index. Analysis of the genetic distances revealed two primary clusters; one that contained the North American breeds and the Kazakh White head, and a second that contained the Yakutian and Kalmyk breeds, and the Chirikof population. Thus, it is suggested that Chirikof Island cattle may be a composite of British breeds emanating from North America and Turano–Mongolian cattle. A potential founder effect, consistent with historical records of the Russian–American period, may contribute to the adaptation of the Chirikof Island cattle to their harsh high-latitude environment. Further study of adaptive mechanisms manifest by these cattle is warranted., published version, peerReviewed

Pectin based quaternary amino anion exchanger (Pc-QAE) was prepared using simple crosslinking polymerization method. This anion exchanger was characterized by X-ray diffraction (XRD), scanning electron microscopy (SEM) and Fourier transform infrared spectroscopy (FTIR). Pc-QAE was applied for the removal of phosphate anion from the aqueous solution. The adsorption process which was pH dependent showed maximum adsorption of phosphate anions at pH 7. Pc-QAE showed good monolayer adsorption capacity for phosphate anions which demonstrated its good capability towards Langmuir isotherm model. Moreover, the adsorption was evaluated thermodynamically and the negative value of Gibbs free energy (−1.791 KJ/mol) revealed the spontaneity of adsorption process. The value of ΔH° and ΔS° were found to be 15.28 and 49.48 KJ/mol, respectively representing the endothermic nature and enhancement in degree of freedom due to the adsorption process., final draft, peerReviewed

Human disturbance can affect the viability of wildlife populations partly through its effects on breeding success. Land use as a form of disturbance may do so by fragmenting the key environments of certain species. We used statistical pattern recognition methods to estimate the long-term effects of human disturbance on the Endangered, landlocked population of the Saimaa ringed seal Pusa hispida saimensis by examining how various densities of buildings on lake shores have altered the survival of juveniles and the persistence of the population. In addition, we examined whether disturbance caused by different intensities of land use would further reduce the long-term persistence of the population. We also provide estimates of the quality of Lake Saimaa shorelines as breeding habitat in relation to building density. Our results show that at present, the lairs of Saimaa ringed seals are located closer to potential sources of human disturbance than they were in the past and that land use intensity has an effect on juvenile mortality. Perinatal mortality increases significantly in more densely developed areas, where the nearest building is within 800 m of a birth lair. In addition, 29% of the shoreline of Lake Saimaa is no longer suitable for ringed seals due to intensive land use. Our results illustrate how human disturbances can significantly compromise juvenile survival and therefore the long-term existence of this Endangered population., published version, peerReviewed

We present data and results from a 9-year survey (2009 – 2017) of the Lake Saimaa signal crayfish population in Finland. This population has a history of chronic infection with Aphanomyces astaci. It has now been discovered that female signal crayfish from Lake Saimaa suffer from various stages of eroded swimmeret syndrome (ESS), and male crayfish also show symptoms of ESS-like trauma (i.e., eroded swimmerets and gonopods). Our data demonstrates the prevalence of A. astaci infection, with gross symptoms prevailing throughout the duration of the entire 2009 – 2017 survey, and that prevalence of ESS among female signal crayfish is correlated with the prevalence of A. astaci infection in the population. The data shows that an increasing proportion of female crayfish suffer from ESS, and have regenerated swimmerets, however, our observations indicate that partially regenerated swimmerets do not fully function during egg hatching. Based on data and observations during the survey, we speculate that low production levels, as indicated by the low catch per unit effort (CPUE), within the Lake Saimaa signal crayfish population could be related to both high A. astaci infection levels and ESS prevalence among females. The former could be causing increasing mortality among adult crayfish and the latter could be lowering Lake Saimaa signal crayfish reproductive output., published version, peerReviewed

Hatchery-reared fish show high mortalities after release to the wild environment. Explanations for this include potentially predetermined genetics, behavioral, and physiological acclimation to fish farm environments, and increased vulnerability to predation and parasitism in the wild. We studied vulnerability to Diplostomum spp. parasites (load of eye flukes in the lenses), immune defense (relative spleen size) and antipredator behaviors (approaches toward predator odor, freezing, and swimming activity) in hatchery-reared juvenile Arctic charr (Salvelinus alpinus) using a nested mating design. Fish were exposed to eye-fluke larvae via the incoming water at the hatchery. Fish size was positively associated with parasite load, but we did not find any relationship between relative spleen size and parasitism. The offspring of different females showed significant variation in their parasite load within sires, implying a dam effect in the vulnerability to parasites. However, the family background did not have any effect on spleen size. In the mean sire level over dams, the fish from the bolder (actively swimming) families in the predator trials suffered higher loads of eye flukes than those from more cautiously behaving families. Thus, the results indicate potentially maternally inherited differences in vulnerability to eye-fluke parasites, and that the vulnerability to parasites and behavioral activity are positively associated with each other at the sire level. This could lead to artificial and unintentional selection for increased vulnerability to both parasitism and predation if these traits are favored in fish farm environments., published version, peerReviewed

Article, Trees are known to affect air quality by capturing a remarkable amount of particles from the atmosphere. However, the significance of trees in removing very fine particles (diameter less than 0.5 μm) is not well understood. We determined particle capture efficiency (Cp) of two birch species: Betula pendula and Betula pubescens by using inert titanium dioxide fine particles (TiO2, geometric mean diameter 0.270 μm) at three wind speeds (1, 3 and 6 ms−1) in a wind tunnel. Capture efficiencies were determined by measuring densities of TiO2 particles on leaf surfaces by scanning electron microscopy. In addition, the particle intake into an inner structure of leaves was studied by transmission electron microscopy. The effects of fine particle exposure and wind speed on emission rates of biogenic volatile organic compounds (BVOCs) were measured. Particles were captured (Cp) equally efficiently on foliage of B. pendula (0.0026 ± 0.0005) % and B. pubescens (0.0025 ± 0.0006) %. Increasing wind speed significantly decreased Cp. Increasing wind speed increased deposition velocity (Vg) on B. pendula but not on B. pubescens. Particles were deposited more efficiently on the underside of B. pendula leaves, whereas deposition was similar on the upper and under sides of B. pubescens leaves. TiO2 particles were found inside three of five B. pendula leaves exposed to particles at a wind speed of 1 ms−1 indicating that particles can penetrate into the plant structure. Emission rates of several mono-, homo- and sesquiterpenes were highest at a wind speed of 3 ms−1 in B. pendula. In B. pubescens, emission rates of a few monoterpenes and nonanal decreased linearly with wind speed, but emission rates of sesquiterpenes were lowest at 3 ms−1 and increased at 6 ms−1. Emission rates of a few green leaf volatile compounds increased with increasing wind speed in both species. The results of this study suggest that the surface structure of trees is less important for capturing particles with a diameter of ca 0.3 μm than for larger particles. Airborne fine particles penetrated into the intercellular space of the leaf via stomata, and this mechanism should be studied further for a better understanding of nanomaterial accumulation in nature. Wind can affect BVOC emissions and composition., final draft, http://purl.org/eprint/status/PeerReviewed

Wastewater treatment is still a critical issue all over the world. Among examined methods for the decontamination of wastewaters, adsorption is a promising, cheap, environmentally friendly and efficient procedure. There are various types of adsorbents that have been used to remove different pollutants such as agricultural waste, compost, nanomaterials, algae, etc., Chitin (poly-β-(1,4)-N-acetyl-d-glucosamine) is the second most abundant natural biopolymer and it has attracted scientific attention as an inexpensive adsorbent for toxic metals. This review article provides information about the use of chitin as an adsorbent. A list of chitin adsorbents with maximum adsorption capacity and the best isotherm and kinetic fitting models are provided. Moreover, thermodynamic studies, regeneration studies, the mechanism of adsorption and the experimental conditions are also discussed in depth., published version, peerReviewed

Perfluoroalkyl substances (PFAS), including two most commonly studied compounds perfluorooctane sulfonate (PFOS) and perfluorooctanoic acid (PFOA), are widely distributed environmental pollutants, used extensively earlier. Due to their toxicological effects the use of PFAS is now regulated. Based on earlier studies on PFOA’s distribution in bone and bone marrow in mice, we investigated PFAS levels and their possible link to bone microarchitecture of human femoral bone samples (n = 18). Soft tissue and bone biopsies were also taken from a 49-year old female cadaver for PFAS analyses. We also studied how PFOA exposure affects differentiation of human osteoblasts and osteoclasts. PFAS were detectable from all dry bone and bone marrow samples, PFOS and PFOA being the most prominent. In cadaver biopsies, lungs and liver contained the highest concentrations of PFAS, whereas PFAS were absent in bone marrow. Perfluorononanoic acid (PFNA) was present in the bones, PFOA and PFOS were absent. In vitro results showed no disturbance in osteogenic differentiation after PFOA exposure, but in osteoclasts, lower concentrations led to increased resorption, which eventually dropped to zero after increase in PFOA concentration. In conclusion, PFAS are present in bone and have the potential to affect human bone cells partly at environmentally relevant concentrations., published version, peerReviewed

Noccaea caerulescens of the Brassicaceae family has become the key model plant among the metal hyperaccumulator plants. Populations/accessions of N. caerulescens from geographic locations with different soil metal concentrations differ in their ability to hyperaccumulate and hypertolerate metals. Comparison of transcriptomes in several accessions provides candidates for detailed exploration of the mechanisms of metal accumulation and tolerance and local adaptation. This can have implications in the development of plants for phytoremediation and improved mineral nutrition. Transcriptomes from root and shoot tissues of four N. caerulescens accessions with contrasting Zn, Cd and Ni hyperaccumulation and tolerance traits were sequenced with Illumina Hiseq2000. Transcriptomes were assembled using the Trinity de novo assembler and were annotated and the protein sequences predicted. The comparison against the BUSCO plant early release dataset indicated high-quality assemblies. The predicted protein sequences have been clustered into ortholog groups with closely related species. The data serve as important reference sequences in whole transcriptome studies, in analyses of genetic differences between the accessions and other species, and for primer design., published version, peerReviewed

Article, Freshwater food webs can be partly supported by terrestrial primary production, often deriving from plant litter of surrounding catchment vegetation. Although consisting mainly of poorly bioavailable lignin, with low protein and lipid content, the carbohydrates from fallen tree leaves and shoreline vegetation may be utilized by aquatic consumers. Here we show that during phytoplankton deficiency, zooplankton (Daphnia magna) can benefit from terrestrial particulate organic matter by using terrestrial-origin carbohydrates for energy and sparing essential fatty acids and amino acids for somatic growth and reproduction. Assimilated terrestrial-origin fatty acids from shoreline reed particles exceeded available diet, indicating that Daphnia may convert a part of their dietary carbohydrates to saturated fatty acids. This conversion was not observed with birch leaf diets, which had lower carbohydrate content. Subsequent analysis of 21 boreal and subarctic lakes showed that diet of herbivorous zooplankton is mainly based on high-quality phytoplankton rich in essential polyunsaturated fatty acids. The proportion of low-quality diets (bacteria and terrestrial particulate organic matter) was, published version, http://purl.org/eprint/status/PeerReviewed

Global warming can substantially affect the export of dissolved organic carbon (DOC) from peat-permafrost to aquatic systems. The direct degradability of such peat-derived DOC, however, is poorly constrained because previous permafrost thaw studies have mainly addressed mineral soil catchments or DOC pools that have already been processed in surface waters. We incubated peat cores from a palsa mire to compare an active layer and an experimentally thawed permafrost layer with regard to DOC composition and degradation potentials of pore water DOC. Our results show that DOC from the thawed permafrost layer had high initial degradation potentials compared with DOC from the active layer. In fact, the DOC that showed the highest bio- and photo-degradability, respectively, originated in the thawed permafrost layer. Our study sheds new light on the DOC composition of peat-permafrost directly upon thaw and suggests that past estimates of carbon-dioxide emissions from thawed peat permafrost may be biased as they have overlooked the initial mineralization potential of the exported DOC., published version, peerReviewed

Isaac Newton's approach to developing theories in his book Principia Mathematica proceeds in four steps. First, he defines various concepts, second, he formulates axioms utilising the concepts, third, he mathematically analyses the behaviour of the system defined by the concepts and axioms obtaining predictions and fourth, he tests the predictions with measurements. In this study, we formulated our theory of boreal forest ecosystems, called NewtonForest, following the four steps introduced by Newton. The forest ecosystem is a complicated entity and hence we needed altogether 27 concepts to describe the material and energy flows in the metabolism of trees, ground vegetation and microbes in the soil, and to describe the regularities in tree structure. Thirtyfour axioms described the most important features in the behaviour of the forest ecosystem. We utilised numerical simulations in the analysis of the behaviour of the system resulting in clear predictions that could be tested with field data. We collected retrospective time series of diameters and heights for test material from 6 stands in southern Finland and five stands in Estonia. The numerical simulations succeeded to predict the measured diameters and heights, providing clear corroboration with our theory., published version, peerReviewed

Article, Both explosive volcanic eruptions, which emit sulfur dioxide into the stratosphere, and stratospheric geoengineering via sulfur injections can potentially cool the climate by increasing the amount of scattering particles in the atmosphere. Here we employ a global aerosol-climate model and an Earth system model to study the radiative and climate changes occurring after an erupting volcano during solar radiation management (SRM). According to our simulations the radiative impacts of the eruption and SRM are not additive and the radiative effects and climate changes occurring after the eruption depend strongly on whether SRM is continued or suspended after the eruption. In the former case, the peak burden of the additional stratospheric sulfate as well as changes in global mean precipitation are fairly similar regardless of whether the eruption takes place in a SRM or non-SRM world. However, the maximum increase in the global mean radiative forcing caused by the eruption is approximately 21 % lower compared to a case when the eruption occurs in an unperturbed atmosphere. In addition, the recovery of the stratospheric sulfur burden and radiative forcing is significantly faster after the eruption, because the eruption during the SRM leads to a smaller number and larger sulfate particles compared to the eruption in a non-SRM world. On the other hand, if SRM is suspended immediately after the eruption, the peak increase in global forcing caused by the eruption is about 32 % lower compared to a corresponding eruption into a clean background atmosphere. In this simulation, only about one-third of the global ensemble-mean cooling occurs after the eruption, compared to that occurring after an eruption under unperturbed atmospheric conditions. Furthermore, the global cooling signal is seen only for the 12 months after the eruption in the former scenario compared to over 40 months in the latter. In terms of global precipitation rate, we obtain a 36 % smaller decrease in the first year after the eruption and again a clearly faster recovery in the concurrent eruption and SRM scenario, which is suspended after the eruption. We also found that an explosive eruption could lead to significantly different regional climate responses depending on whether it takes place during geoengineering or into an unperturbed background atmosphere. Our results imply that observations from previous large eruptions, such as Mount Pinatubo in 1991, are not directly applicable when estimating the potential consequences of a volcanic eruption during stratospheric geoengineering., published version, peerReviewed

Article, The second law of thermodynamics is on one hand understood to account for irrevocable flow of energy from the top down, on the other hand it is seen to imply irreversible increase of disorder. This tension between the 2 stances is resolved in favor of the free energy consumption when entropy is derived from the statistical mechanics of open systems. The change in entropy is shown to map directly to the decrease in free energy without any connotation attached to disorder. Increase of disorder, just as order, is found to be merely a consequence of free energy consumption. The erroneous association of disorder with entropy stems from an unwarranted assumption that a system could undergo changes of state without concomitant dissipation, i.e., a change in energy., published version, peerReviewed

Article, Fish are an important source of eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) for birds, mammals and humans. In aquatic food webs, these highly unsaturated fatty acids (HUFA) are essential for many physiological processes and mainly synthetized by distinct phytoplankton taxa. Consumers at different trophic levels obtain essential fatty acids from their diet because they cannot produce these sufficiently de novo. Here, we evaluated how the increase in phosphorus concentration (eutrophication) or terrestrial organic matter inputs (brownification) change EPA and DHA content in the phytoplankton. Then, we evaluated whether these changes can be seen in the EPA and DHA content of piscivorous European perch (Perca fluviatilis), which is a widely distributed species and commonly consumed by humans. Data from 713 lakes showed statistically significant differences in the abundance of EPA- and DHA-synthesizing phytoplankton as well as in the concentrations and content of these essential fatty acids among oligo-mesotrophic, eutrophic and dystrophic lakes. The EPA and DHA content of phytoplankton biomass (mg HUFA g− 1) was significantly lower in the eutrophic lakes than in the oligo-mesotrophic or dystrophic lakes. We found a strong significant correlation between the DHA content in the muscle of piscivorous perch and phytoplankton DHA content (r = 0.85) as well with the contribution of DHA-synthesizing phytoplankton taxa (r = 0.83). Among all DHA-synthesizing phytoplankton this correlation was the strongest with the dinoflagellates (r = 0.74) and chrysophytes (r = 0.70). Accordingly, the EPA + DHA content of perch muscle decreased with increasing total phosphorus (r2 = 0.80) and dissolved organic carbon concentration (r2 = 0.83) in the lakes. Our results suggest that although eutrophication generally increase biomass production across different trophic levels, the high proportion of low-quality primary producers reduce EPA and DHA content in the food web up to predatory fish. Ultimately, it seems that lake eutrophication and brownification decrease the nutritional quality of fish for human consumers., published version, peerReviewed

Fire is a major natural disturbance factor in boreal forests, and the frequency of forest fires is predicted to increase due to climate change. Nitrogen (N) is a key determinant of carbon sequestration in boreal forests because the shortage of N limits tree growth. We studied changes in N pools and fluxes, and the overall N balance across a 155-year non stand-replacing fire chronosequence in sub-arctic Pinus sylvestris forests in Finland. Two years after the fire, total ecosystem N pool was 622 kg ha-1 of which 16% was in the vegetation, 8% in the dead biomass and 76% in the soil. 155 years after the fire, total N pool was 960 kg ha-1, with 27% in the vegetation, 3% in the dead biomass and 69% in the soil. This implies an annual accumulation rate of 2.28 kg ha-1 which was distributed equally between soil and biomass. The observed changes in N pools were consistent with the computed N balance +2.11 kg ha-1 yr-1 over the 155-year post-fire period. Nitrogen deposition was an important component of the N balance. The biological N fixation increased with succession and constituted 9% of the total N input during the 155 post-fire years. N2O fluxes were negligible (≤ 0.01 kg ha-1 yr-1) and did not differ among post-fire age classes. The number and intensity of microbial genes involved in N cycling were lower at the site 60 years after fire compared to the youngest and the oldest sites indicating potential differences in soil N cycling processes. The results suggest that in sub-arctic pine forests, the non-stand-replacing, intermediate-severity fires decrease considerably N pools in biomass but changes in soil and total ecosystem N pools are slight. Current fire-return interval does not seem to pose a great threat to ecosystem productivity and N status in these sub-arctic forests., published version, peerReviewed

Domestic wastewaters, which cannot be disposed through sewage networks, must be treated with different on-site treatment systems; these are usually commercial, small-scale treatment plants or built sand filters. These systems are usually maintained by the house’s inhabitants. This study was achieved by analysing the chemical and microbiological data of 717 effluents collected in Finland and Sweden. There were inadequate reductions in 31% of phosphorus effluents, 22% of nitrogen effluents and 5% of biological oxygen demand compounds. The addition of a coagulant capable of precipitating phosphorus improved the performance of sand filters and biorotors. There are no legally binding limitations on the number of enteric microorganisms that can be present in an effluent, but the number of Escherichia coli and enterococci exceeded more than 100 colony forming units per 100 mL in 59% and 53% effluents studied, with the highest numbers for these indicators being more than 100,000 cfu per 100 mL. The number of E. coli and enterococci were lower when the concentration of phosphorus in effluent was less than 1 mg/L. The treatment efficiency varied extensively, even between similar plant models, possibly due to either irregular use, or after long pauses, when they were not being used. In addition, it is possible that the end users are not capable of properly maintaining these wastewater treatment plants., published version, peerReviewed