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is a freshwater crayfish native to the southern central United States and northern Mexico. In Brazil, it is only present in natural environment in the state of Sao Paulo. Nutritional and reproduct...

Whole-genome sequencing has advanced the study of species evolution, including the detection of genealogical discordant events such as ancient hybridization and incomplete lineage sorting (ILS). The evolutionary history of bighorn (Ovis canadensis) and thinhorn (Ovis dalli) sheep present an ideal system to investigate evolutionary discordance due to their recent and rapid radiation and putative secondary contact between bighorn and thinhorn sheep subspecies, specifically the dark pelage Stone sheep (O. dalli stonei) and predominately white Dall sheep (O. dalli dalli), during the last ice age. Here, we used multiple genomes of bighorn and thinhorn sheep, together with snow (O. nivicola) and the domestic sheep (O. aries) as outgroups, to assess their phylogenomic history, potential introgression patterns and their adaptive consequences. Among the Pachyceriforms (snow, bighorn and thinhorn sheep) a consistent monophyletic species tree was retrieved; however, many genealogical discordance patterns were observed. Alternative phylogenies frequently placed Stone and bighorn as sister clades. This relationship occurred more often and was less divergent than that between Dall and bighorn. We also observed many blocks containing introgression signal between Stone and bighorn genomes in which coat colour genes were present. Introgression signals observed between Dall and bighorn were more random and less frequent, and therefore probably due to ILS or intermediary secondary contact. These results strongly suggest that Stone sheep originated from a complex series of events, characterized by multiple, ancient periods of secondary contact with bighorn sheep.

This study analyzed the effect of different concentrations of herbicides (Facet®, Primoleo®, and Roundup®) on metabolism and oxidative balance (superoxide dismutase and catalase activity, lipid peroxidation) in the gills, liver, kidneys, and tail muscle of adult catfish. All herbicides caused protein depletion in gills, increased glycogen and triacylglycerol consumption in the liver, and changes in muscle glycogen. Roundup® and Primoleo® stimulated lipid deposition in the liver, while Roundup® and Facet® stimulated lipid consumption in gills. In kidneys, protein content increased after Roundup® and Primoleo® exposure, glycogen increased after Facet®, and lipids increased after Roundup®. Primoleo® had the strongest effect on muscle, with changes in all metabolites. Regarding oxidative stress, the liver and kidneys were the organs most affected by exposure to herbicides, and catalase was the main enzyme involved in the detoxification of these herbicides. A hierarchy of toxicity was established for the tested chemicals: Facet® > Primoleo® > Roundup®.

Big cat genomes reveal a history of interspecies admixture and adaptive evolution of genes underlying development and sensory perception., The great cats of the genus Panthera comprise a recent radiation whose evolutionary history is poorly understood. Their rapid diversification poses challenges to resolving their phylogeny while offering opportunities to investigate the historical dynamics of adaptive divergence. We report the sequence, de novo assembly, and annotation of the jaguar (Panthera onca) genome, a novel genome sequence for the leopard (Panthera pardus), and comparative analyses encompassing all living Panthera species. Demographic reconstructions indicated that all of these species have experienced variable episodes of population decline during the Pleistocene, ultimately leading to small effective sizes in present-day genomes. We observed pervasive genealogical discordance across Panthera genomes, caused by both incomplete lineage sorting and complex patterns of historical interspecific hybridization. We identified multiple signatures of species-specific positive selection, affecting genes involved in craniofacial and limb development, protein metabolism, hypoxia, reproduction, pigmentation, and sensory perception. There was remarkable concordance in pathways enriched in genomic segments implicated in interspecies introgression and in positive selection, suggesting that these processes were connected. We tested this hypothesis by developing exome capture probes targeting ~19,000 Panthera genes and applying them to 30 wild-caught jaguars. We found at least two genes (DOCK3 and COL4A5, both related to optic nerve development) bearing significant signatures of interspecies introgression and within-species positive selection. These findings indicate that post-speciation admixture has contributed genetic material that facilitated the adaptive evolution of big cat lineages.