1. Genome sequences reveal global dispersal routes and suggest convergent genetic adaptations in seahorse evolution
- Author
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Chunyan Li, Zexia Gao, Ralf F. Schneider, Zeyu Chen, Liangmin Huang, Xin Wang, Yanhong Zhang, Xuemei Lu, Byrappa Venkatesh, Andreas F. Kautt, Qiang Lin, Melisa Olave, Furong Qi, Jia Zhong, Axel Meyer, Huixian Zhang, Yali Hou, Xiaolong Tu, Bo Zhang, Yali Liu, Shuaishuai Liu, Jianping Yin, Shiming Wan, Meng Qu, Hao Zhang, He Zhang, Alexander Nater, Lingfeng Meng, Kai Wang, and Geng Qin
- Subjects
0106 biological sciences ,0301 basic medicine ,Population genetics ,Science ,Kelp ,General Physics and Astronomy ,010603 evolutionary biology ,01 natural sciences ,Article ,General Biochemistry, Genetics and Molecular Biology ,Evolution, Molecular ,03 medical and health sciences ,Species Specificity ,ddc:570 ,Animals ,14. Life underwater ,Ecosystem ,Phylogeny ,geography ,Multidisciplinary ,geography.geographical_feature_category ,Base Sequence ,Geography ,biology ,fungi ,Pelagic zone ,Genomics ,DNA ,General Chemistry ,Coral reef ,biology.organism_classification ,Adaptation, Physiological ,Smegmamorpha ,Phylogenetics ,030104 developmental biology ,Seagrass ,Habitat ,Seahorse ,Evolutionary biology ,Biological dispersal ,Adaptation ,Animal Distribution - Abstract
Seahorses have a circum-global distribution in tropical to temperate coastal waters. Yet, seahorses show many adaptations for a sedentary, cryptic lifestyle: they require specific habitats, such as seagrass, kelp or coral reefs, lack pelvic and caudal fins, and give birth to directly developed offspring without pronounced pelagic larval stage, rendering long-range dispersal by conventional means inefficient. Here we investigate seahorses’ worldwide dispersal and biogeographic patterns based on a de novo genome assembly of Hippocampus erectus as well as 358 re-sequenced genomes from 21 species. Seahorses evolved in the late Oligocene and subsequent circum-global colonization routes are identified and linked to changing dynamics in ocean currents and paleo-temporal seaway openings. Furthermore, the genetic basis of the recurring “bony spines” adaptive phenotype is linked to independent substitutions in a key developmental gene. Analyses thus suggest that rafting via ocean currents compensates for poor dispersal and rapid adaptation facilitates colonizing new habitats., A new seahorse genome and the re-sequenced genomes of 21 other species shed new light on the evolutionary origin and global dispersal routes of seahorses, and show that bony spines—a key adaptation against predation—probably evolved multiple times via independent substitutions in the bmp3 gene.
- Published
- 2021