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Your search keyword '"de Mita, Stéphane"' showing total 9 results
Start Over Author "de Mita, Stéphane" Topic [sdv] life sciences [q-bio]
9 results on '"de Mita, Stéphane"'

1. Genome-wide QTL mapping of aggressiveness traits in the poplar rust fungus

Author

Pernaci, Michaël, Maupetit, Agathe, De Mita, Stéphane, Fabre, Bénédicte, Duplessis, S., Halkett, Fabien, Frey, Pascal, Interactions Arbres-Microorganismes (IAM), Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL), Unité Expérimentale Forestière Lorraine (UEFL), Institut National de la Recherche Agronomique (INRA), ANR-13-BSV7- 0011, FUNFIT project, ANR-12-ADAP-0009, GANDALF project, and ProdInra, Migration

Subjects
[SDV] Life Sciences [q-bio], [SDV]Life Sciences [q-bio], ComputingMilieux_MISCELLANEOUS
Abstract

International audience

Published
2017

2. Demographic and genomic consequences of a major selective event in the poplar rust

Author

Halkett, Fabien, Persoons, Antoine, Maupetit, Agathe, Duplessis, Sébastien, Frey, Pascal, de Mita, Stéphane, Interactions Arbres-Microorganismes (IAM), Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL), ANR-13-BSV7- 0011, FUNFIT project, ANR-12-ADAP-0009, GANDALF project, ANR-11-BSV7-0007, Clonix project, and ProdInra, Migration

Subjects
[SDV] Life Sciences [q-bio], [SDV]Life Sciences [q-bio], ComputingMilieux_MISCELLANEOUS
Abstract

International audience

Published
2017

3. Phenotypic and genomic adaptation of the ericoid fungus Oidiodendron maius to heavy metals

Author

Daghino, Stefania, Murat, Claude, de Mita, Stéphane, Martino, Elena, Martin, Francis, Perotto, Silvia, Department of Life Sciences and Systems Biology [University of Turin], University of Turin, Interactions Arbres-Microorganismes (IAM), Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL), Université de Lorraine (UL)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Dipartimento di Scienze della Vita e Biologia dei Sistemi, Università degli studi di Torino (UNITO), and Martino, Elena

Subjects
[SDV] Life Sciences [q-bio], [SDV]Life Sciences [q-bio], ComputingMilieux_MISCELLANEOUS
Abstract

International audience

Published
2016

4. Update on Melampsora larici-populina genomics

Author

Duplessis, S., De Mita, Stéphane, Halkett, Fabien, Frey, Pascal, Interactions Arbres-Microorganismes (IAM), Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL), Duplessis, Sebastien, and ProdInra, Migration

Subjects
[SDV] Life Sciences [q-bio], [SDV]Life Sciences [q-bio], fungi, food and beverages, ComputingMethodologies_GENERAL, ComputingMilieux_MISCELLANEOUS
Abstract

National audience; The genome of the poplar rust fungus Melampsora larici-populina has been sequenced almost 10 years ago by an international consortium in the frame of the Community Sequencing Program of the US DoE Joint Genome Institute. The detailed analysis of the genome content and gene annotation, along with comparison to the cereal rust fungus Puccinia graminis f.sp. tritici, has revealed the singular profile of rust fungal genomes. Similar to other obligate biotrophic fungi (e.g. powdery mildews), rust fungi exhibit a large genome size (>80Mb) and an important content in repeat elements (~45%). In contrast, they possess a large gene complement (>15,000 genes) marked by the presence of many expanded gene families specific to the Pucciniales order or the corresponding families (i.e. Melampsoraceae or Pucciniaceae). Since, more rust genomes have been sequenced, analyzed and published, confirming these general trends and opening great perspectives for comparative rust genomics. The genome of M. larici-populina has been instrumental to explore the genetic diversity of the fungus through re-sequencing of isolates sampled through the years in natural populations. Beside, gene expression during poplar leaf infection or throughout the life cycle has helped to build a comprehensive transcriptomic analysis of the rust fungus. More recently, a genetic map of the poplar rust fungus has been obtained from a self-cross of the reference genome isolate. All these data have led to the version 2 of the genome now anchored to 18 linkage groups, including a refined gene annotation available online on the MycoCosm website. We will provide here a complete update on the poplar rust genome and an overview of ongoing works to decipher the biology of this fascinating and devastating rust fungus.

Published
2016

5. Genetic architecture of pathogenicity-related life history traits in the poplar rust fungus

Author

Maupetit, Agathe, Pernaci, Michaël, Fabre, Bénédicte, Duplessis, S., De Mita, Stéphane, Halkett, Fabien, Frey, Pascal, Interactions Arbres-Microorganismes (IAM), Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL), Unité Expérimentale Forestière Lorraine (UEFL), Institut National de la Recherche Agronomique (INRA), ANR-13-BSV7-0011, FUNFIT project, ANR-12-ADAP-0009, GANDALF project, and ProdInra, Migration

Subjects
[SDV] Life Sciences [q-bio], [SDV]Life Sciences [q-bio], ComputingMilieux_MISCELLANEOUS
Abstract

National audience

Published
2016

6. Mapping QTL of aggressiveness traits in the poplar rust fungus

Author

Pernaci, Michaël, De Mita, Stéphane, Fabre, Bénédicte, Duplessis, S., Halkett, Fabien, Frey, Pascal, Interactions Arbres-Microorganismes (IAM), Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL), Unité Expérimentale Forestière Lorraine (UEFL), Institut National de la Recherche Agronomique (INRA), ANR-13-BSV7-0011, FUNFIT project, ANR-12-ADAP-0009, GANDALF project, and ProdInra, Migration

Subjects
[SDV] Life Sciences [q-bio], [SDV]Life Sciences [q-bio], ComputingMilieux_MISCELLANEOUS
Abstract

National audience

Published
2015

7. On the road to mapping QTLs of morphological and aggressiveness traits in the poplar rust fungus

Author

Pernaci, Michaël, de Mita, Stéphane, Fabre, Bénédicte, Andrieux, Axelle, Halkett, Fabien, Frey, Pascal, Interactions Arbres-Microorganismes (IAM), Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL), Unité Expérimentale Forestière Lorraine (UEFL), Institut National de la Recherche Agronomique (INRA), ANR-13-BSV7-0011 FUNFIT project, ANR-12-ADAP-0009 GANDALF project, and ProdInra, Migration

Subjects
[SDV] Life Sciences [q-bio], [SDV]Life Sciences [q-bio], ComputingMilieux_MISCELLANEOUS
Abstract

International audience

Published
2015

8. Identification of candidate effectors in the poplar rust fungus Melampsora larici-populina through a population genomics approach

Author

Persoons, Antoine, Halkett, Fabien, de Mita, Stéphane, Duplessis, Sébastien, Interactions Arbres-Microorganismes (IAM), Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL), and ProdInra, Migration

Subjects
[SDV] Life Sciences [q-bio], [SDV]Life Sciences [q-bio], ComputingMilieux_MISCELLANEOUS
Abstract

International audience

Published
2015

9. Genomics, transcriptomics and effectoromics of the poplar leaf rust fungus Melampsora larici-populina

Author

Petre, Benjamin, Hacquard, Stéphane, Persoons, Antoine, Tisserant, Emilie, Morin, Emmanuelle, Delaruelle, Christine, Pernaci, Michaël, De Mita, Stéphane, Halkett, Fabien, HECKER, Arnaud, Rouhier, Nicolas, Frey, Pascal, Duplessis, S., ProdInra, Migration, Interactions Arbres-Microorganismes (IAM), and Institut National de la Recherche Agronomique (INRA)-Université de Lorraine (UL)

Subjects
[SDV] Life Sciences [q-bio], [SDV]Life Sciences [q-bio], ComputingMilieux_MISCELLANEOUS
Abstract

International audience

Published
2014

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