28 results on '"Zuloaga, Rodrigo"'
Search Results
2. Gills de novo assembly reveals oxidative stress, unfolded protein, and immune response on red cusk-eel (Genypterus chilensis) under thermal stress
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Dettleff, Phillip, Toloza, Carla, Fuentes, Marcia, Aedo, Jorge, Zuloaga, Rodrigo, Estrada, Juan Manuel, Molina, Alfredo, and Valdés, Juan Antonio
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- 2024
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3. Revealing coastal upwelling impact on the muscle growth of an intertidal fish
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Zuloaga, Rodrigo, Varas, Oscar, Ahrendt, Camila, Pulgar, Victor M., Valdés, Juan A., Molina, Alfredo, Duarte, Cristian, Urzúa, Ángel, Guzmán-Rivas, Fabián, Aldana, Marcela, and Pulgar, José
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- 2023
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4. Artificial light at night (ALAN) causes variable dose-responses in a sandy beach isopod
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Quintanilla-Ahumada, Diego, Quijón, Pedro A., Manríquez, Patricio H., Pulgar, José, García-Huidobro, Manuel R., Miranda, Cristian, Molina, Alfredo, Zuloaga, Rodrigo, and Duarte, Cristian
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- 2022
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5. RNA-seq analysis reveals the dynamic regulation of proteasomal and autophagic degradation systems of rainbow trout (Oncorhynchus mykiss) skeletal muscle challenged with infectious pancreatic necrosis virus (IPNV)
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Aedo, JorgeE., Aravena-Canales, Daniela, Dettleff, Phillip, Fuentes-Valenzuela, Marcia, Zuloaga, Rodrigo, Rivas-Aravena, Andrea, Molina, Alfredo, and Valdés, Juan Antonio
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- 2022
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6. RNA-seq analysis of compensatory growth in the skeletal muscle of fine flounder (Paralichthys adspersus)
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Mendez, Katterinne N., Zuloaga, Rodrigo, Valenzuela, Cristián A., Bastias-Molina, Macarena, Meneses, Claudio, Vizoso, Paula, Valdés, Juan Antonio, and Molina, Alfredo
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- 2018
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7. Effects of crowding on the three main proteolytic mechanisms of skeletal muscle in rainbow trout (Oncorhynchus mykiss)
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Valenzuela, Cristián A., Ponce, Claudia, Zuloaga, Rodrigo, González, Pamela, Avendaño-Herrera, Ruben, Valdés, Juan A., and Molina, Alfredo
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- 2020
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8. 11-Deoxycorticosterone (DOC)'s Action on the Gill Osmoregulation of Juvenile Rainbow Trout (Oncorhynchus mykiss).
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Zuloaga, Rodrigo, Ahumada-Langer, Luciano, Aedo, Jorge Eduardo, Molina, Alfredo, and Valdés, Juan Antonio
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RAINBOW trout , *MINERALOCORTICOID receptors , *OSMOREGULATION , *STEROID receptors , *GILLS , *FISH physiology , *POTASSIUM channels - Abstract
Simple Summary: Aquaculture produces fish that are then marketed to the population, but the type of production used today generates stress in fish. Constant stress, which occurs through the hormone cortisol, negatively affects the seawater adaptation of juvenile fish, which is detrimental to the aquaculture process. For many years, it was thought that only cortisol influenced physiological responses in fish. However, in recent years, the cortisol intermediary 11-deoxycorticosterone (DOC) has been considered a complementary stress-related hormone in fish. Given the above, this work aims to unravel whether DOC is involved in the regulation of early physiological and transcriptional responses in fish gills. To ascertain this, juvenile rainbow trout were injected with DOC and/or pharmacological inhibitors of corticosteroid receptors. Then, the physiological parameters and RNA sequencing of the gills were analyzed. The experiment concluded that DOC is important during stress and that it is vital for the balance between minerals and water in fish. The results of this work will help us understand the other effects of DOC in fish, as well as help improve the monitoring of animal welfare in the aquaculture industry through the incorporation of novel and potential stress molecular biomarkers. In aquaculture, stress can negatively affect fish growth. For years, the cortisol hormone has been thought to play both glucocorticoid and mineralocorticoid functions. Nevertheless, recent research has suggested that 11-deoxycorticosterone (DOC) released during stress could contribute to cortisol actions, though this process is still misunderstood. Here, we evaluated the DOC effects on physiological and early transcriptional responses by RNA-seq. Juvenile rainbow trout were treated with DOC and/or glucocorticoids (mifepristone) or mineralocorticoid (eplerenone) receptor antagonists. Subsequently, plasma was collected, and cDNA libraries were generated from the gills of vehicle (control), DOC, mifepristone, mifepristone with DOC, eplerenone, and eplerenone with DOC groups. Calcium and phosphate levels in plasma were changed. Results revealed 914 differentially expressed transcripts (DETs) induced by DOC compared with control, mainly associated with sodium ion transmembrane transport, gluconeogenesis, negative regulation of transmembrane transport, and activation of innate immune response. DOC versus eplerenone with DOC comparison displayed 444 DETs related to cell-cell junction organization, canonical glycolysis, positive regulation of immune response, and potassium ion transport. Conversely, no DETs were detected in DOC versus mifepristone with DOC comparison. These data suggest that DOC has a relevant role in gill stress response and ion transport, which is differentially regulated by mineralocorticoid receptors. [ABSTRACT FROM AUTHOR]
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- 2024
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9. Role of glucocorticoid and mineralocorticoid receptors in rainbow trout (Oncorhynchus mykiss) skeletal muscle: A transcriptomic perspective of cortisol action.
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Aedo, Jorge E., Zuloaga, Rodrigo, Aravena-Canales, Daniela, Molina, Alfredo, and Valdés, Juan Antonio
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MINERALOCORTICOID receptors ,GLUCOCORTICOID receptors ,RAINBOW trout ,SKELETAL muscle ,HYDROCORTISONE - Abstract
Cortisol is an essential regulator of neuroendocrine stress responses in teleost. Cortisol performs its effects through the modulation of glucocorticoid receptor (GR) and mineralocorticoid receptor (MR), activating gene expression. Until now the contribution of both receptors in the global transcriptional response in teleost skeletal muscle has not been explored. To understand in a comprehensive and global manner how GR and MR modulates the skeletal muscle transcriptomic response, we performed RNA-seq analysis. Juvenile rainbow trout (Oncorhynchus mykiss) pretreated with a suppressor of endogenous cortisol production were intraperitoneally injected with cortisol (10 mg/kg). We also included a treatment with mifepristone (GR antagonist) and eplerenone (MR antagonist) in the presence or absence of cortisol. cDNA libraries were constructed from the skeletal muscle of rainbow trout groups: vehicle, cortisol, mifepristone, eplerenone, mifepristone/cortisol and eplerenone/cortisol. RNA-seq analysis revealed that 135 transcripts were differentially expressed in cortisol vs. mifepristone/cortisol group, mainly associated to inflammatory response, ion transmembrane transport, and proteolysis. In the other hand, 68 transcripts were differentially expressed in cortisol vs. eplerenone/cortisol group, mainly associated to muscle contraction, and regulation of cell cycle. To validate these observations, we performed in vitro experiments using rainbow trout myotubes. In myotubes treated with cortisol, we found increased expression of cxcr2, c3, and clca3p mediated by GR, associated with inflammatory response, proteolysis, and ion transmembrane transport, respectively. Contrastingly, MR modulated the expression of myh2 and gadd45g mainly associated with muscle contraction and regulation of cell cycle, respectively. These results suggest that GR and MR have a differential participation in the physiological response to stress in teleost skeletal muscle. [ABSTRACT FROM AUTHOR]
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- 2023
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10. Effect of 11-Deoxycorticosterone in the Transcriptomic Response to Stress in Rainbow Trout Skeletal Muscle.
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Zuloaga, Rodrigo, Aravena-Canales, Daniela, Aedo, Jorge Eduardo, Osorio-Fuentealba, Cesar, Molina, Alfredo, and Valdés, Juan Antonio
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RAINBOW trout , *MINERALOCORTICOID receptors , *GENETIC regulation , *TRANSCRIPTOMES , *GLUCOCORTICOID receptors - Abstract
In aquaculture, many stressors can negatively affect growth in teleosts. It is believed that cortisol performs glucocorticoid and mineralocorticoid functions because teleosts do not synthesize aldosterone. However, recent data suggest that 11-deoxycorticosterone (DOC) released during stress events may be relevant to modulate the compensatory response. To understand how DOC modifies the skeletal muscle molecular response, we carried out a transcriptomic analysis. Rainbow trout (Oncorhynchus mykiss) were intraperitoneally treated with physiological doses of DOC in individuals pretreated with mifepristone (glucocorticoid receptor antagonist) or eplerenone (mineralocorticoid receptor antagonist). RNA was extracted from the skeletal muscles, and cDNA libraries were constructed from vehicle, DOC, mifepristone, mifepristone plus DOC, eplerenone, and eplerenone plus DOC groups. The RNA-seq analysis revealed 131 differentially expressed transcripts (DETs) induced by DOC with respect to the vehicle group, mainly associated with muscle contraction, sarcomere organization, and cell adhesion. In addition, a DOC versus mifepristone plus DOC analysis revealed 122 DETs related to muscle contraction, sarcomere organization, and skeletal muscle cell differentiation. In a DOC versus eplerenone plus DOC analysis, 133 DETs were associated with autophagosome assembly, circadian regulation of gene expression, and regulation of transcription from RNA pol II promoter. These analyses indicate that DOC has a relevant function in the stress response of skeletal muscles, whose action is differentially modulated by GR and MR and is complementary to cortisol. [ABSTRACT FROM AUTHOR]
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- 2023
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11. High-Temperature Stress Effect on the Red Cusk-Eel (Geypterus chilensis) Liver: Transcriptional Modulation and Oxidative Stress Damage.
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Dettleff, Phillip, Zuloaga, Rodrigo, Fuentes, Marcia, Gonzalez, Pamela, Aedo, Jorge, Estrada, Juan Manuel, Molina, Alfredo, and Valdés, Juan Antonio
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OXIDATIVE stress , *HEAT shock proteins , *UNFOLDED protein response , *LIVER , *GENETIC transcription regulation , *THERMAL stresses , *ENVIRONMENTAL literacy - Abstract
Simple Summary: The red cusk-eel (Genypterus chilensis) is a native Chilean species important for aquaculture diversification in Chile. The effect of high-temperature stress on the liver, a key organ for fish metabolism, is unknown. In this study we determined for the first time the effects of high-temperature stress on the liver of red cusk-eel. The results showed that high-temperature stress increased hepatic enzyme activity in the plasma of stressed fish. Additionally, this stressor generated oxidative damage in liver, and generated a transcriptional response with 1239 down-regulated and 1339 up-regulated transcripts associated with several processes, including unfolded protein response, heat shock response and oxidative stress, among others. Together, these results indicate that high-temperature stress generates a relevant impact on liver, with should be considered for the aquaculture and fisheries industry of this species under a climate change scenario. Environmental stressors, such as temperature, are relevant factors that could generate a negative effect on several tissues in fish. A key fish species for Chilean aquaculture diversification is the red cusk-eel (Genypterus chilensis), a native fish for which knowledge on environmental stressors effects is limited. This study evaluated the effects of high-temperature stress on the liver of red cusk-eel in control (14 °C) and high-temperature (19 °C) groups using multiple approaches: determination of plasmatic hepatic enzymes (ALT, AST, and AP), oxidative damage evaluation (AP sites, lipid peroxidation, and carbonylated proteins), and RNA-seq analysis. High-temperature stress generated a significant increase in hepatic enzyme activity in plasma. In the liver, a transcriptional regulation was observed, with 1239 down-regulated and 1339 up-regulated transcripts. Additionally, high-temperature stress generated oxidative stress in the liver, with oxidative damage and transcriptional modulation of the antioxidant response. Furthermore, an unfolded protein response was observed, with several pathways enriched, as well as a heat shock response, with several heat shock proteins up regulated, suggesting candidate biomarkers (i.e., serpinh1) for thermal stress evaluation in this species. The present study shows that high-temperature stress generated a major effect on the liver of red cusk-eel, knowledge to consider for the aquaculture and fisheries of this species. [ABSTRACT FROM AUTHOR]
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- 2022
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12. Temperature effect on oxidative stress and egg quality‐related genes on post‐ovulatory eggs and ovary of red cusk‐eel (Genypterus chilensis).
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Dettleff, Phillip, Zuloaga, Rodrigo, Fuentes, Marcia, Estrada, Juan M., Molina, Alfredo, and Valdés, Juan A.
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TEMPERATURE effect , *OXIDATIVE stress , *OVARIES , *EGGS , *EGG quality , *THERMAL stresses - Abstract
Red cusk‐eel (Genypterus chilensis) is a native species with potential for Chilean aquaculture diversification. However, no information exists on the effects of temperature on oxidative stress and eggs quality markers in post‐ovulatory eggs and ovary of this species. We determine that high and low temperature generate oxidative damage on post‐ovulatory eggs, with no effect on ovary. Temperature induces thermal stress markers expression on post‐ovulatory eggs, and modulates antioxidant and eggs quality markers on post‐ovulatory eggs and ovary, information to consider for quality evaluation in the red cusk‐eel management. [ABSTRACT FROM AUTHOR]
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- 2021
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13. Early transcriptomic responses associated with the membrane-initiated action of cortisol in the skeletal muscle of rainbow trout (Oncorhynchus mykiss).
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Aedo, Jorge E., Zuloaga, Rodrigo, Bastías-Molina, Macarena, Meneses, Claudio, Boltaña, Sebastián, Molina, Alfredo, and Antonio Valdés, Juan
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Cortisol is a critical neuroendocrine regulator of the stress response in fish. Cortisol practically affects all tissues by interacting with an intracellular receptor and modulating target gene expression. However, cortisol also interacts with components of the plasma membrane in a nongenomic process that activates rapid signaling. Until now, the implication of this novel cortisol signaling for the global transcriptional response has not been explored. In the present work, we evaluated the effects of the membrane-initiated actions of cortisol on the in vivo transcriptome of rainbow trout (Oncorhynchus mykiss) skeletal muscle. RNA-Seq analyses were performed to examine the transcriptomic changes in rainbow trout stimulated by physiological concentrations of cortisol and cortisol coupled with bovine serum albumin (cortisol-BSA), a membrane-impermeable analog of cortisol. A total of 660 million paired-ends reads were generated. Reads mapped onto the reference genome revealed that 1,737; 897; and 1,012 transcripts were differentially expressed after 1, 3, and 9 h of cortisol-BSA treatment, respectively. Gene Ontology analysis showed that this novel action of cortisol modulates several biological processes, such as mRNA processing, ubiquitin-dependent protein catabolic processes, and transcription regulation. In addition, a KEGG analysis revealed that focal adhesion was the main signaling pathway that was upregulated at all the times tested. Taking these results together, we propose that the membrane-initiated cortisol action contributes significantly in the regulation of stress-mediated gene expression. [ABSTRACT FROM AUTHOR]
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- 2019
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14. Membrane-initiated cortisol action modulates early pyruvate dehydrogenase kinase 2 (pdk2) expression in fish skeletal muscle.
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Aedo, Jorge E., Zuloaga, Rodrigo, Boltaña, Sebastián, Molina, Alfredo, and Valdés, Juan Antonio
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PYRUVATE dehydrogenase kinase , *SKELETAL muscle , *THIAMIN pyrophosphate , *GLUCOCORTICOID receptors , *RAINBOW trout , *METABOLIC regulation - Abstract
Cortisol is the main glucocorticoid hormone in teleosts involved in the regulation of metabolic adjustments under both normal and stressful physiological conditions. In the skeletal muscle, cortisol modulates the energetic metabolism promoting the mobilization of glucose and other energetic substrates to overcome the stress stimulus. The effects of cortisol-mediated stress response are attributed to canonical/genomic mechanisms which involve the interaction of the hormone with its intracellular glucocorticoid receptor and, consequently, modulation of target genes. However, cortisol also can interact with membrane components, activating rapid signaling pathways with unknown contribution during the early stress response. In the present work, we evaluated the impact of membrane-initiated cortisol action over the expression of the critical modulator of energetic metabolism, pyruvate dehydrogenase kinase 2 (pdk2), in fish skeletal muscle. Juvenile rainbow trout were intraperitoneally administered with stress-related doses of cortisol and cortisol-BSA, and the expression of pdk2 was assayed by using RT-qPCR. Our results reveal that pdk2 mRNA levels increased in the skeletal muscle at one hour in both cortisol- and cortisol-BSA-treated fish. Moreover, in vitro studies revealed a biphasic response over the pdk2 regulation in myotubes mediated first through membrane-cortisol signaling pathways followed by the classic cortisol action. Finally, pdk2 up-regulation owing to cortisol and cortisol-BSA is reverted in RU486 treated myotubes, suggesting that GR signaling participates in both cortisol signaling pathways. This work suggests that non-classical cortisol pathways contribute to regulate the early metabolic response to stress in fish skeletal muscle. • Cortisol-mediated effects are attributed mainly to classic/genomic mechanisms. • We evaluated the membrane-initiated cortisol action on pdk2 expression in fish muscle. • One hour of cortisol stimulus up-regulated pdk2 through membrane-initiated cortisol action. • After three hours, pdk2 regulation is mediated through both cortisol mechanisms. • Pdk2 represents a novel target of cortisol membrane-initiated action in rainbow trout muscle. [ABSTRACT FROM AUTHOR]
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- 2019
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15. Oceanographic upwelling conditions influence signaling pathways involved in muscle growth of intertidal fish.
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Zuloaga, Rodrigo, Almarza, Oscar, Valdés, Juan A., Molina, Alfredo, and Pulgar, José
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INTERTIDAL fishes , *UPWELLING (Oceanography) , *MUSCLE growth , *BIOCOMPLEXITY , *EXTRACELLULAR signal-regulated kinases - Abstract
Few studies have addressed the impact of the upwelling oceanographical conditions on biological processes, such as growth, using a molecular and physiological approach. Upwelling conditions are characterized by low temperature seawater and high nutrient availability, which represents an ideal opportunity to understand how habitat modulates animal performance at different levels of biological complexity. We aimed to assess intraspecific variations in weight, oxygen consumption, protein content, and key signaling pathways involved in muscle-growth (protein kinase B (AKT) and extracellular signal-regulated kinase (ERK)) under experimental trials considering high/low seawater temperatures with full/restricted food rations. For this purpose, we studied Girella laevifrons , one of the most abundant fish species inhabiting rocky intertidal zones along the Eastern South Pacific coasts. Using fish obtained from upwelling (U) and non-upwelling (NU) zones, we reported that U animals displayed higher growth performance during both contrasting trials, with a weight gain (~3 g), lower oxygen consumption (~12%), and higher protein contents (~20%). Only ERK showed significant differences during the trials (~2-fold downregulation between NU and U fish). We also found that U fish increased protein ubiquitination in high water temperature and restricted food ration in contrast to NU fish. Our results help to elucidate how upwelling conditions may influence fish growth at physiological and molecular levels. Still, future analyses are necessary to improve the information regarding the impact of U and NU condition on animals, as well as the possible applications of this data in the aquaculture industry. [ABSTRACT FROM AUTHOR]
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- 2018
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16. Chronic stress inhibits growth and induces proteolytic mechanisms through two different nonoverlapping pathways in the skeletal muscle of a teleost fish.
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Valenzuela, Cristián A., Zuloaga, Rodrigo, Mercado, Luis, Einarsdottir, Ingibjörg Eir, Björnsson, Björn Thrandur, Valdés, Juan Antonio, and Molina, Alfredo
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Chronic stress detrimentally affects animal health and homeostasis, with somatic growth, and thus skeletal muscle, being particularly affected. A detailed understanding of the underlying endocrine and molecular mechanisms of how chronic stress affects skeletal muscle growth remains lacking. To address this issue, the present study assessed primary (plasma cortisol), secondary (key components of the GH/IGF system, muscular proteolytic pathways, and apoptosis), and tertiary (growth performance) stress responses in fine flounder (Paralichthys adspersus) exposed to crowding chronic stress. Levels of plasma cortisol, glucocorticoid receptor 2 (gr2), and its target genes (klf15 and redd1) mRNA increased significantly only at 4 wk of crowding (P < 0.05). The components of the GH/IGF system, including ligands, receptors, and their signaling pathways, were significantly downregulated at 7 wk of crowding (P < 0.05). Interestingly, chronic stress upregulated the ubiquitin-proteasome pathway and the intrinsic apoptosis pathways at 4wk (P < 0.01), whereas autophagy was only significantly activated at 7 wk (P < 0.05), and meanwhile the ubiquitin-proteasome and the apoptosis pathways returned to control levels. Overall growth was inhibited in fish in the 7-wk chronic stress trial (P < 0.05). In conclusion, chronic stress directly affects muscle growth and downregulates the GH/IGF system, an action through which muscular catabolic mechanisms are promoted by two different and nonoverlapping proteolytic pathways. These findings provide new information on molecular mechanisms involved in the negative effects that chronic stress has on muscle anabolic/catabolic signaling balance. [ABSTRACT FROM AUTHOR]
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- 2018
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17. Upwelling-derived oceanographic conditions impact growth performance and growth-related gene expression in intertidal fish.
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Fuentes, Eduardo N., Zuloaga, Rodrigo, Almarza, Oscar, Mendez, Katterinne, Valdés, Juan Antonio, Molina, Alfredo, and Pulgar, Jose
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GENE expression , *INTERTIDAL fishes , *INTERTIDAL animals , *FISH physiology , *SKELETAL muscle - Abstract
Growth is one of the main biological processes in aquatic organisms that is affected by environmental fluctuations such as upwelling (characterized by food-rich waters). In fish, growth is directly related with skeletal muscle increase; which represents the largest tissue of body mass. However, the effects of upwelling on growth, at the physiological and molecular level, are unknown. This study used Girella laevifrons (one of the most abundant intertidal fish in Eastern South Pacific) as a biological model, considering animals from upwelling (U) and non-upwelling (NU) areas. Here, we evaluated the effect of nutritional composition and food availability on growth performance and expression of key growth-related genes (insulin-kike growth factor 1 ( igf1 ) and myosin heavy-chain ( myhc )) and atrophy-related genes (muscle ring-finger 1 ( murf1 ), F-box only protein 32 ( atrogin-1 ) and BCL2/adenovirus E1B 19 kDa-interacting protein 3 ( bnip3 )). We reported that, among zones, U fish displayed higher growth performance in response to nutritional composition, specifically between protein- and fiber-rich diets (~ 1 g). We also found in NU fish that atrophy-related genes were upregulated with fiber-rich diet and during fasting (~ 2-fold at minimum respect U). In conclusion, our results suggest that the growth potential of upwelling fish may be a consequence of differential muscle gene expression. Our data provide a preliminary approach contributing on how upwelling influence fish growth at the physiological and molecular levels. Future studies are required to gain further knowledge about molecular differences between U and NU animals, as well as the possible applications of this knowledge in the aquaculture industry. [ABSTRACT FROM AUTHOR]
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- 2017
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18. Fish skeletal muscle tissue is an important focus of immune reactions during pathogen infection.
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Valenzuela, Cristián A., Zuloaga, Rodrigo, Poblete-Morales, Matías, Vera-Tobar, Tamara, Mercado, Luis, Avendaño-Herrera, Ruben, Valdés, Juan Antonio, and Molina, Alfredo
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SKELETAL muscle physiology , *FISH immunology , *FISH diseases , *PATHOGENIC microorganisms , *NATURAL immunity , *TOLL-like receptors , *IMMUNOCOMPETENT cells , *PEPTIDE antibiotics - Abstract
Skeletal muscle in mammals can express and secrete immune-related molecules during pathogen infection. Despite in fish is known that classical immune tissues participate in innate immunity, the role of skeletal muscle in this function is poorly understood. To determine the immunocompetence of fish skeletal muscle, juvenile fine flounder ( Paralichthys adpersus ) were challenged with Vibrio ordalii . Different Toll-like receptors, pro-inflammatory cytokines (TNFα, Il-1β, and IL-8), and immune-effector molecules (NKEF and the antimicrobial peptides hepcidin and LEAP-2) were analyzed. Infection initially triggered IL-1β upregulation and P38-MAPK/AP-1 pathway activation. Next, the NFĸB pathway was activated, together with an upregulation of intracellular Toll-like receptor expressions ( tlr3, tlr8a tlr9, and tlr21 ), TNFα production, and leap-2 expression. Finally, transcriptions of il-1β , il-8, tnfα, nkef-a , and hepcidin were also upregulated. These results suggest that fish skeletal muscle is an immunologically active organ that could play an important role against pathogens. [ABSTRACT FROM AUTHOR]
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- 2017
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19. Transcriptomic analysis of the hepatic response to stress in the red cusk-eel (Genypterus chilensis): Insights into lipid metabolism, oxidative stress and liver steatosis.
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Naour, Sebastian, Espinoza, Brisa M., Aedo, Jorge E., Zuloaga, Rodrigo, Maldonado, Jonathan, Bastias-Molina, Macarena, Silva, Herman, Meneses, Claudio, Gallardo-Escarate, Cristian, Molina, Alfredo, and Valdés, Juan Antonio
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FATTY degeneration ,GENYPTERUS ,OXIDATIVE stress ,LIPID metabolism ,PHYSIOLOGICAL stress ,FISHES - Abstract
Teleosts exhibit a broad divergence in their adaptive response to stress, depending on the magnitude, duration, and frequency of stressors and the species receiving the stimulus. We have previously reported that the red cusk-eel (Genypterus chilensis), an important marine farmed fish, shows a physiological response to stress that results in increased skeletal muscle atrophy mediated by over-expression of components of the ubiquitin proteasome and autophagy-lysosomal systems. To better understand the systemic effects of stress on the red cusk-eel metabolism, the present study assessed the transcriptomic hepatic response to repetitive handling-stress. Using high-throughput RNA-seq, 259 up-regulated transcripts were found, mostly associated with angiogenesis, gluconeogenesis, and triacylglyceride catabolism. Conversely, 293 transcripts were down-regulated, associated to cholesterol biosynthesis, PPARα signaling, fatty acid biosynthesis, and glycolysis. This gene signature was concordant with hepatic metabolite levels and hepatic oxidative damage. Moreover, the increased plasmatic levels of AST (aspartate aminotransferase), ALT (alanine aminotransferase) and AP (alkaline phosphatase), as well as liver histology suggest stress-induced liver steatosis. This study offers an integrative molecular and biochemical analysis of the hepatic response to handling-stress, and reveals unknown aspects of lipid metabolism in a non-model teleost. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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20. Cortisol Induces Reactive Oxygen Species Through a Membrane Glucocorticoid Receptor in Rainbow Trout Myotubes.
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Espinoza, Marlen B., Aedo, Jorge E., Zuloaga, Rodrigo, Valenzuela, Cristian, Molina, Alfredo, and Valdés, Juan A.
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- 2017
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21. Skeletal muscle plasticity induced by seasonal acclimatization involves IGF1 signaling: Implications in ribosomal biogenesis and protein synthesis.
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Fuentes, Eduardo N., Zuloaga, Rodrigo, Valdes, Juan Antonio, Molina, Alfredo, and Alvarez, Marco
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SKELETAL muscle , *MATERIAL plasticity , *ACCLIMATIZATION , *SOMATOMEDIN C , *CELLULAR signal transduction , *RIBOSOMES , *ORIGIN of life , *PROTEIN synthesis - Abstract
One of the most fundamental biological processes in living organisms that are affected by environmental fluctuations is growth. In fish, skeletal muscle accounts for the largest proportion of body mass, and the growth of this tissue is mainly controlled by the insulin-like growth factor (IGF) system. By using the carp ( Cyprinus carpio ), a fish that inhabits extreme conditions during winter and summer, we assessed the skeletal muscle plasticity induced by seasonal acclimatization and the relation of IGF signaling with protein synthesis and ribosomal biogenesis. The expression of igf1 in muscle decreased during winter in comparison with summer, whereas the expression for both paralogues of igf2 did not change significantly between seasons. The expression of igf1 receptor a ( igf1ra ), but not of igf1rb , was down-regulated in muscle during the winter as compared to the summer. A decrease in protein contents and protein phosphorylation for IGF signaling molecules in muscle was observed in winter-acclimatized carp. This was related with a decreased expression in muscle for markers of myogenesis (myoblast determination factor ( myod ), myogenic factor 5 ( myf5 ), and myogenin ( myog )); protein synthesis (myosin heavy chain ( mhc ) and myosin light chain ( mlc3 and mlc1b )); and ribosomal biogenesis ( pre-rRNA and ribosomal proteins). IGF signaling, and key markers of ribosomal biogenesis, protein synthesis, and myogenesis were affected by seasonal acclimatization, with differential regulation in gene expression and signaling pathway activation observed in muscle between both seasons. This suggests that these molecules are responsible for the muscle plasticity induced by seasonal acclimatization in carp. [ABSTRACT FROM AUTHOR]
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- 2014
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22. Skeletal muscle plasticity induced by seasonal acclimatization in carp involves differential expression of rRNA and molecules that epigenetically regulate its synthesis.
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Fuentes, Eduardo N., Zuloaga, Rodrigo, Nardocci, Gino, Fernandez de la Reguera, Catalina, Simonet, Nicolas, Fumeron, Robinson, Valdes, Juan Antonio, Molina, Alfredo, and Alvarez, Marco
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SKELETAL muscle , *MATERIAL plasticity , *GENE expression , *RIBOSOMAL RNA , *EPIGENETICS , *CARP , *GENETIC regulation - Abstract
Abstract: Ribosomal biogenesis controls cellular growth in living organisms, with the rate-limiting step of this process being the transcription of ribosomal DNA (rDNA). Considering that epigenetic mechanisms allow an organism to respond to environmental changes, the expression in muscle of several molecules that regulate epigenetic rRNA synthesis, as well as rDNA transcription, were evaluated during the seasonal acclimatization of the carp. First, the nucleotide sequences encoding the components forming the NoRC (ttf-I, tip5) and eNoSC (sirt1, nml, suv39h1), two chromatin remodeling complexes that silence rRNA synthesis, as well as the sequence of ubf1, a key regulator of rDNA transcription, were obtained. Subsequently the transcriptional regulation of the aforementioned molecules, and other key molecules involved in rRNA synthesis (mh2a1, mh2a2, h2a.z, h2a.z.7, nuc, p80), was assessed. The carp sequences for TTF-I, TIP5, SIRT1, NML, SUV39H1, and UBF1 showed a high conservation of domains and key amino acids in comparison with other fish and higher vertebrates. The mRNA contents in muscle for ttf-I, tip5, sirt1, nml, suv39h1, mh2a1, mh2a.z, and nuc were up-regulated during winter in comparison with summer, whereas the mRNA levels of mh2a2, ubf1, and p80 were down-regulated. Also, the contents of molecules involved in processing the rRNA (snoRNAs) and pRNA, a stabilizer of NoRC complex, were analyzed, finding that these non-coding RNAs were not affected by seasonal acclimatization. These results suggest that variations in the expression of rRNA and the molecules that epigenetically regulate its synthesis are contributing to the muscle plasticity induced by seasonal acclimatization in carp. [Copyright &y& Elsevier]
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- 2014
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23. De novo Assembly and Analysis of Tissue-Specific Transcriptomes of the Edible Red Sea Urchin Loxechinus albus Using RNA-Seq.
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Antiqueo, Paulette, Zuloaga, Rodrigo, Bastias-Molina, Macarena, Meneses, Claudio, Estrada, Juan Manuel, Molina, Alfredo, and Valdés, Juan Antonio
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SEA urchins , *TRANSCRIPTOMES , *GONADS , *RNA sequencing , *GENE ontology , *ECHINODERMATA - Abstract
Simple Summary: Edible red sea urchin (Loxechinus albus) is an endemic species of echinoderm distributed along the Chilean coasts. This resource has been overexploited in recent years, depleting their natural populations. At present, there are few reported gene sequences available in public databases, restricting the molecular studies associated with aquaculture for this species. The aim of this study was to present the first annotated reference transcriptome of L. albus using NGS technologies and the differential expression transcripts analysis of the evaluated tissues. The transcriptome data obtained in this study will serve as a reference for future molecular research in the edible red sea urchin and other sea urchin species. Edible red sea urchin (Loxechinus albus) is an endemic echinoderm species of the Chilean coasts. The worldwide demand for high-quality gonads of this species has addressed the depletion of its natural populations. Studies on this sea urchin are limited, and genomic information is almost nonexistent. Hence, generate a transcriptome is crucial information that will considerably enrich molecular data and promote future findings for the L. albus aquaculture. Here, we obtained transcriptomic data of the edible red sea urchin by Illumina platform. Total RNA was extracted from gonads, intestines, and coelomocytes of juvenile urchins, and samples were sequenced using MiSeq Illumina technology. A total of 91,119,300 paired-end reads were de novo assembled, 185,239 transcripts produced, and a reference transcriptome created with 38.8% GC content and an N50 of 1769 bp. Gene ontology analysis revealed notable differences in the expression profiles between gonads, intestines, and coelomocytes, allowing the detection of transcripts associated with specific biological processes and KEGG pathways. These data were validated using 12 candidate transcripts by real-time qPCR. This dataset will provide a valuable molecular resource for L. albus and other species of sea urchins. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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24. RNA-Seq-Based Analysis of Cortisol-Induced Differential Gene Expression Associated with Piscirickettsia salmonis Infection in Rainbow Trout (Oncorhynchus mykiss) Myotubes.
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Zuloaga, Rodrigo, Dettleff, Phillip, Bastias-Molina, Macarena, Meneses, Claudio, Altamirano, Claudia, Valdés, Juan Antonio, and Molina, Alfredo
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RAINBOW trout , *GENE expression , *SALMON farming , *SKELETAL muscle , *CELLULAR control mechanisms - Abstract
Simple Summary: Skeletal muscle is the most abundant tissue in fish and the main product of the Chilean salmonid aquaculture industry. Intensive farming conditions generate stress and increased susceptibility to infectious diseases, such as salmonid rickettsial septicemia (SRS), that directly affect this tissue. However, the immunocompetence of skeletal muscle during infection is poorly understood. To further explore the interplay between pathogen infection and stress on this tissue, we analyze the transcriptional profile of isolated rainbow trout (Oncorhynchus mykiss) muscle cells pretreated with 3 h of the stress hormone cortisol, and then infected with the SRS etiologic agent Piscirickettsia salmonis for 8 h, using RNA sequencing technology. For the first time, the obtained data reveals the biological processes related to programmed cell death, negative regulation of cell proliferation, and innate immune response. These results are validated by real-time qPCR. Furthermore, cortisol pretreatment significantly stimulated bacterial gene expression compared to infected cells. These data demonstrated that fish skeletal muscle can activate an intrinsic immune-like response against P. salmonis that is differentially regulated by cortisol. The information provided here will help us to understand the molecular mechanisms of fish muscle cells respond to infection, which could prevent P. salmonis outbreaks in skeletal muscle under stress conditions. Salmonid rickettsial septicemia (SRS) is the major infectious disease of the Chilean salmonid aquaculture industry caused by Piscirickettsia salmonis. Intensive farming conditions generate stress and increased susceptibility to diseases, being skeletal muscle mainly affected. However, the interplay between pathogen infection and stress in muscle is poorly understood. In this study, we perform an RNA-seq analysis on rainbow trout myotubes that are pretreated for 3 h with cortisol (100 ng/mL) and then infected with P. salmonis strain LF-89 for 8 h (MOI 50). Twelve libraries are constructed from RNA samples (n = 3 per group) and sequenced on Illumina HiSeq 4000. A total of 704,979,454 high-quality reads are obtained, with 70.25% mapped against the reference genome. In silico DETs include 175 total genes—124 are upregulated and 51 are downregulated. GO enrichment analysis reveals highly impacted biological processes related to apoptosis, negative regulation of cell proliferation, and innate immune response. These results are validated by RT-qPCR of nine candidate transcripts. Furthermore, cortisol pretreatment significantly stimulated bacterial gene expression of ahpC and 23s compared to infection. In conclusion, for the first time, we describe a transcriptomic response of trout myotubes infected with P. salmonis by inducing apoptosis, downregulating cell proliferation, and intrinsic immune-like response that is differentially regulated by cortisol. [ABSTRACT FROM AUTHOR]
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- 2021
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25. Physiological and molecular responses to thermal stress in red cusk-eel (Genypterus chilensis) juveniles reveals atrophy and oxidative damage in skeletal muscle.
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Dettleff, Phillip, Zuloaga, Rodrigo, Fuentes, Marcia, Gonzalez, Pamela, Aedo, Jorge, Estrada, Juan Manuel, Molina, Alfredo, and Valdés, Juan Antonio
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THERMAL stresses , *MUSCLE growth , *SKELETAL muscle , *HOT water , *HEAT shock proteins , *FISH physiology , *MESSENGER RNA - Abstract
The red cusk-eel (Genypterus chilensis) is a native species with strong potential to support Chilean aquaculture diversification. Environmental stressors, such as temperature, may generate important effects in fish physiology with negative impact. However, no information exists on the effects of thermal stress in Genypterus species or how this stressor affects the skeletal muscle. The present study evaluated for the first time the effect of high temperature stress in red cusk-eel juveniles to determine changes in plasmatic markers of stress (cortisol, glucose and lactate dehydrogenase (LDH)), the transcriptional effect in skeletal muscle genes related to (i) heat shock protein response (hsp60 and hsp70), (ii) muscle atrophy and growth (foxo1 , foxo3 , fbxo32 , murf-1 , myod1 and ddit4), and (iii) oxidative stress (cat, sod1 and gpx1), and evaluate the DNA damage (AP sites) and peroxidative damage (lipid peroxidation (HNE proteins)) in this tissue. Thermal stress generates a significant increase in plasmatic levels of cortisol, glucose and LDH activity and induced heat shock protein transcripts in muscle. We also observed an upregulation of atrophy-related genes (foxo1, foxo3 and fbxo32) and a significant modulation of growth-related genes (myod1 and ddit4). Thermal stress induced oxidative stress in skeletal muscle, as represented by the upregulation of antioxidant genes (cat and sod1) and a significant increase in DNA damage and lipid peroxidation. The present study provides the first physiological and molecular information of the effects of thermal stress on skeletal muscle in a Genypterus species, which should be considered in a climate change scenario. • High water temperature generate thermal stress on red cusk-eel juveniles. • Thermal stress increase cortisol and glucose levels and LDH activity in plasma. • Upregulation of hsp60 and hsp70 in muscle in response to thermal stress. • Modulation of atrophy-related and growth-related genes in skeletal muscle. • Thermal stress induced oxidative stress and damage in muscle on red cusk-eel. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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26. Stocking density induces differential expression of immune-related genes in skeletal muscle and head kidney of fine flounder (Paralichthys adspersus).
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Valenzuela, Cristián A., Escobar-Aguirre, Sebastián, Zuloaga, Rodrigo, Vera-Tobar, Tamara, Mercado, Luis, Björnsson, Björn Thrandur, Valdés, Juan A., and Molina, Alfredo
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SKELETAL muscle , *GENE expression , *PROXIMAL kidney tubules , *PARALICHTHYS , *STEROID receptors , *KIDNEYS - Abstract
Highlights • The expression of several immune-related genes in fish skeletal muscle were downregulated under chronic stress conditions. • The expression of the same immune-related gene expression in head kidney were upregulated under chronic stress conditions. • The crowding stress may adversely affect normal muscle function. Abstract Immunity can be modulated by different internal and external factors, being stress one of the most important. However, the stress effects on the immunocompetence of the skeletal muscle has not been studied in detail in earlier vertebrates. Here, we examine the effect of chronic (4 and 7 weeks) crowding stress on the immunocompetence of skeletal muscle and head kidney in the fine flounder (Paralichthys adspersus). Corticosteroid receptor transcript levels and their target genes; pro-inflammatory cytokines, and Toll-, NOD-, and RIG-like receptors were quantified by qPCR. The results indicate that chronic stress down-regulates the expression of these genes in muscle, compromising skeletal muscle immunocompetence, while the expression of these genes is upregulated in head kidney after seven weeks of crowding stress. The data suggests that chronic stress modulates the expression of these immune-related genes in a tissue-specific manner. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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27. Effect of cortisol on the immune-like response of rainbow trout (Oncorhynchus mykiss) myotubes challenged with Piscirickettsia salmonis.
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Carrizo, Victoria, Valenzuela, Cristián A., Zuloaga, Rodrigo, Aros, Camila, Altamirano, Claudia, Valdés, Juan A., and Molina, Alfredo
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RAINBOW trout , *HYDROCORTISONE , *ANTIMICROBIAL peptides , *MUSCLE cells , *NATURAL immunity , *CELL culture - Abstract
[Display omitted] • Cortisol triggered a stress response in rainbow trout myotubes, upregulating KLF15. • Cortisol negatively modulated the mRNA levels of TLR5m. • P.salmonis challenge upregulated TLRs, pro-inflammatory cytokines and AMPs genes. • Cortisol pre-treatment and P.salmonis challenged not affected stress-related genes. • Cortisol pre-treatment and P. salmonis challenged upregulated IL-8. Salmonids are a species of high commercial value in Chilean aquaculture, where muscle is the final product of the industry. Fish can be affected by stress during intensive cultures, increasing susceptibility to infections. Recently, we reported that muscle is an important focus of immune reactions. However, studies have shown the immunosuppressive effect of stress only in lymphoid organs, and few studies have been conducted on muscle and immunity. Hence, we determine the effects of cortisol on the immune-like response of fish myotubes challenged with Piscirickettsia salmonis by three trials. First, rainbow trout primary culture of muscle was cultured and treated with cortisol (100 ng/mL) for 3 and 4 h. Second, myotubes were challenged with P. salmonis (MOI 50) for 4, 6 and 8 h. And third, muscle cell cultures were pretreated with cortisol and then challenged with P. salmonis. The mRNA levels of glucocorticoid pathway and innate immunity were evaluated by qPCR. Cortisol increased the klf15 levels and downregulated the innate immune-related tlr5m gene and antimicrobial peptides. P. salmonis challenge upregulated several immune-related genes. Finally, cortisol pretreatment followed by P. salmonis challenge differentially modulated stress- and immune-related genes. These data suggest that fish muscle cells possess an intrinsic immune response and are differentially regulated by cortisol, which could lead to bacterial outbreaks in muscle under stress conditions. [ABSTRACT FROM AUTHOR]
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- 2021
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28. Transcriptional dynamics of immune, growth and stress related genes in skeletal muscle of the fine flounder (Paralichthys adpersus) during different nutritional statuses.
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Valenzuela, Cristián A., Escobar, Daniela, Perez, Lorena, Zuloaga, Rodrigo, Estrada, Juan Manuel, Mercado, Luis, Valdés, Juan Antonio, and Molina, Alfredo
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FISH growth , *FISH immunology , *NUTRITIONAL status , *GENETIC transcription , *PARALICHTHYS , *SKELETAL muscle , *FISH nutrition - Abstract
The effects of stress on immune activity and growth in early vertebrates have not been studied in detail. The present study used fine flounder ( Paralichthys adspersus ) skeletal muscle as a model to evaluate molecules involved in the stress response, including the glucocorticoid receptors, foxo1/3 , and the target genes of these. Additionally, immune markers ( il-1β and tnfα ) and effector molecules of atrophy ( bnip3 , caspase-3 , and lc3 ) were assessed. These molecules were analyzed during periods of long-term fasting and refeeding. During fasting, gene expression related to the stress response and atrophy increased; whereas immune markers were down-regulated. During refeeding, atrophy- and stress-related gene expression significantly decreased. In contrast, immune markers were up-regulated. These results provide novel insight on the control of growth in the skeletal muscle of a non-mammalian species under a stressful condition, suggesting that growth, stress, and immune activity in muscle are closely related and coordinated by orchestrated transcriptional dynamics. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
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